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Oryza sativa
cluster # 11061 cluster # 11061       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11061#0 length = 1499 sequences # 5  
consensus_11061#1 length = 587 sequences # 2  
consensus_11061#2 length = 438 sequences # 1  

consensusID : consensus_11061#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1499
fasta sequence
                              [AGTGATCAAATCTCACCCACAAGCATATCTCTCGCACCATTCCACCCTATAGAAACGAGATAACAAGACGCTGTTTGCACTAGCTATTTGACAGCCGACAAGAACCAGTTAGGTAAAACTCAGTAGGATGCAGGTTTGAATGGCTGAATGCCAACCTCTGCAACTGCAAGAAGGCAAGAAACTGCAAGAGCTGCAGCCATACGATGGCTGCAATCCTTCAGTGTACAGAGGCCCAATTCTGCTGCCCCGGCAGGCCAACTCGGCGCCG-CGGCCGTGCCGCCGGAGATGTCGTCCTCGTCGGGGTCAGGGAGAAGCGCGACGGAGGCGAGAGCNTTGAAGATCCACAGCGAGGCTGNACGGCGGCGGCGAGAGAGGATCAATGCTCATCTGACAACACTGAGGAGAATGATCCCTGATACTAAGCAGGTTTGTGCAAGTTTTTACCGTTGTGAAGCATTCAGAAAGAAAAAAAATATGCATCAACATCTGAGCCATTTCAGAGAGTTTGCTCGCAGTTCAACTATAAACTTTTTTTGTGATCTTGTTAGCTAACATAATTGTTGAAGCTAAAGATGAGAGAGGTTAGATATCTATTTAAAAAACTGTTTTTCTGTCGTAGTTCGTGTAGAACTTTGATACTTGCAAGAAAGTCGAAACCAAGAAAAAGTCATCTGAAAGAAATCTTCAGGCTCACATTTGTTCACATTTCAACACTCCTTTTCTAATAAGTTTGGAATTCCCTCACAGGACAAATGCTACAAGCCTAGAATGCCATGACTCCTGAACACAAATTTTCTTAAAAAAATTTCTGCACTGCAGATGGACAAGGCCACCTTGTTAGCCAGAGTGGTGGACCAAGTGAAGGATCTGAAGAGGAAAGCAAGTGAGATCACACAAAGAACACCTCTCCCTCCAGAGACCAACGAAGTCTCCATCGAATGCTTCACCGGAGACGCTGCCACCGCCGCCACCACTG-TCGCCGGCAACCACAAGACCTTGTACATCAAGGCTTCCATCAGCTGCGACGACCGGCCGGACCTCATCGCCGGGATCACCCACGCATTCCATGGCCTGAGGCTGAGGACGGTCAGAGCAGAGATGACAT-CACTGGGAGGAAGGGTGCAGCATGTGTTCATATTGTGCAGGGAGGAAGGCATTGCAGGT-GGTGTGAGCCTCAAGTCTCTGAAGGAGGCTGTCAGGCAGGCACTAGCCAAGGTTGCCTCTCCTGAATTGGTATATGGCAGCAGTCACTTTCAGAGCAAGAGGCAGAGGAT-CCTGGAGTCACATTGCTCAATTATGTCCATATAGATTTGTTCCTCTTCTGGGGATTTTGATTTTATTTTTCTACTAGCTGAGAATATGTATGAAATAAGAGAGAGAATCTTCTTCTTCTGAGAGCTATATAGGCCTGAGAATTGTGTGCCTGAAATTGCTGTGAAAGAATTGATGTCTGAACTGTTGCTAGTGCTAGTGGTTGCAATCAACCGACAAGAAAAAAA]

[+] EMBL C26491               [AGTGATCAAATCTCACCCACAAGCATATCTCTCGCACCATTCCACCCTATAGAAACGAGATAACAAGACGCTGTTTGCACTAGCTATTTGACAGCCGACAAGAACCAGTTAGGTAAAACTCAGTAGGATGCAGGTTTGAATGGCTGAATGCCAACCTCTGCAACTGCAAGAAGGCAAGAAACTGCAAGAGCTGCAGCCATACGATGGCTGCAATCCTTCAGTGTACAGAGGCCCAATTCTGCTGCCCCGGCAGGCCAACTCGGCGCCG CGGCCGTGCCGCCGGAGATGTCGTCCTCGTCGGGGTCAGGGAGAAGCGCGACGGAGGCGAGAGCNTTGAAGATCCACAGCGAGGCTGNACGGCGGCGGCGAGAGAGGATCAATGCTCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK106292             [                                       TTCCACCCTATAGAAACGAGATAACAAGACGCTGTTTGCACTAGCTATTTGACAGCCGACAAGAACCAGTTAGGTAAAACTCAGTAGGATGCAGGTTTGAATGGCTGAATGCCAACCTCTGCAACTGCAAGAAGGCAAGAAACTGCAAGAGCTGCAGCCATACGATGGCTGCAATCCTTCAGTGTACAGAGGCCCAATTCTGCTGCCCCGGCAGGCCAACTCGGCGCCGCCGGCCGTGCCGCCGGAGATGTCGTCCTCGTCGGGGTCAGGGAGAAGCGCGACGGAGGCGAGAGCGTTGAAGATCCACAGCGAGGCTGAACGGCGGCGGCGAGAGAGGATCAATGCTCATCTGACAACACTGAGGAGAATGATCCCTGATACTAAGCAGGTTTGTGCAAGTTTTTACCGTTGTGAAGCATTCAGAAAGAAAAAAAATATGCATCAACATCTGAGCCATTTCAGAGAGTTTGCTCGCAGTTCAACTATAAACTTTTTTTGTGATCTTGTTAGCTAACATAATTGTTGAAGCTAAAGATGAGAGAGGTTAGATATCTATTTAAAAAACTGTTTTTCTGTCGTAGTTCGTGTAGAACTTTGATACTTGCAAGAAAGTCGAAACCAAGAAAAAGTCATCTGAAAGAAATCTTCAGGCTCACATTTGTTCACATTTCAACACTCCTTTTCTAATAAGTTTGGAATTCCCTCACAGGACAAATGCTACAAGCCTAGAATGCCATGACTCCTGAACACAAATTTTCTTAAAAAAATTTCTGCACTGCAGATGGACAAGGCCACCTTGTTAGCCAGAGTGGTGGACCAAGTGAAGGATCTGAAGAGGAAAGCAAGTGAGATCACACAAAGAACACCTCTCCCTCCAGAGACCAACGAAGTCTCCATCGAATGCTTCACCGGAGACGCTGCCACCGCCGCCACCACTG TCGCCGGCAACCACAAGACCTTGTACATCAAGGCTTCCATCAGCTGCGACGACCGGCCGGACCTCATCGCCGGGATCACCCACGCATTCCATGGCCTGAGGCTGAGGACGGTCAGAGCAGAGATGACAT CACTGGGAGGAAGGGTGCAGCATGTGTTCATATTGTGCAGGGAGGAAGGCATTGCAGGT GGTGTGAGCCTCAAGTCTCTGAAGGAGGCTGTCAGGCAGGCACTAGCCAAGGTTGCCTCTCCTGAATTGGTATATGGCAGCAGTCACTTTCAGAGCAAGAGGCAGAGGAT CCTGGAGTCACATTGCTCAATTATGTCCATATAGATTTGTTCCTCTTCTGGGGATTTTGATTTTATTTTTCTACTAGCTGAGAATATGTATGAAATAAGAGAGAGAATCTTCTTCTTCTGAGAGCTATATAGGCCTGAGAATTGTGTGCCTGAAATTGCTGTGAAAGAATTGATGTCTGAACTGTTGCTAGTGCTAGTGGTTGCAATCAACCGACAAG       ]
[+] EMBL CF337481             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAATTTTCTTAAAAAAATTTCTGCACTGCAGATGGACAAGGCCACCTTGTTAGCCAGAGTGGTGGACCAAGTGAAGGATCTGAAGAGGAAAGCAAGTGAGATCACACAAAGAACACCTCTCCCTCCAGAGACCAACGAAGTCTCCATCGAATGCTTCACCGGAGACGCTGCCACCGCCGCCACCACTGNTCGCCGGCAACCACAAGACCTTGTACATCAAGGCTTCCATCAGCTGCGACGACCGGCCGGACCTCATCGCCGGGATCACCCACGCATTCCATGGCCTGAGGCTGAGGACGGTCAGAGCAGAGATGACATNCACTGGGAGGAAGGGTGCAGCATGTGTTCATATTGTGCAGGGAGGAAGG ATTGCAGGTGGGTGTGAGCCTCAAGTCTCTGAAGGAGGCTGTCAGGCAGGCACTAGCCAAGGTTGCCTCTCCTGAATTGGTATATGGCAGCAGTCACTTTCAGAGCAAGAGGCAGAGGATCCCTGGAGTCACATTGC                                                                                                                                                                                                                 ]
[-] EMBL CF318021             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CCACCACTG TCGCCGGCAACCACAAGACCTTGTACATCAAGGCTTCCATCAGCTGCGACGACCGGCCGGACCTCATCGCCGGGATCACCCACGCATTCCATGGCCTGAGGCTGAGGACGGTCAGAGCAGAGATGACAT CACTGGGAGGAAGGGTGCAGCATGTGTTCATATTGTGCAGGGAGGAAGGCATTGCAGGT GGTGTGAGCCTCAAGTCTCTGAAGGAGGCTGTCAGGCAGGCACTAGCCAAGGTTGCCTCTCCTGAATTGGTATATGGCAGCAGTCACTTTCAGAGCAAGAGGCAGAGGAT CCTGGAGTCACATTGCTCAATTATGTCCATATAGATTTGTTCCTCTTCTGGGGATTTTGATTTTATTTTTCTACTAGCTGAGAATATGTATGAAATAAGAGAGAGAATCTTCTTCTTCTGAGAGCTATATAGGCCTGAGAATTGTGTGCCTGAAATTGCTGTGAAAGAATTGATGTCTGAACTGTTGCTAGTGCTAGTGGTTGCAATCAACTGACAAGAAAAAAA]
[+] EMBL AU090634             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             nCGGTCAGAGCAGAGATGACAT CACTGGGAGGAAGGGTNCAGCATGTGTTCATATTGTGCAGGGAGGAAGGCATTGCAGGT GGTGTGAGCCTCAAGTCTCTGAAGGAGGCTGTCAGGCAGGCACTAGCCAAGGTTGCCTCTCCTGAATTGGTATATGGCAGCAGTCACTTTCAGAGCAAGAGGCAGAGGAT CCTGGAGTCACATTGCTCAATTATGTCCATATAGATTTGTTCCTCTTCTGGGGATTTTGATTTTATTTTTCTACTAGCTGAGAATATGTATGAAATAAGAGAGAGAATCTTCTTCTTCTGAGAGCTAaaaaaa                                                                                            ]


>consensus_11061#0 AGTGATCAAATCTCACCCACAAGCATATCTCTCGCACCATTCCACCCTATAGAAACGAGA TAACAAGACGCTGTTTGCACTAGCTATTTGACAGCCGACAAGAACCAGTTAGGTAAAACT CAGTAGGATGCAGGTTTGAATGGCTGAATGCCAACCTCTGCAACTGCAAGAAGGCAAGAA ACTGCAAGAGCTGCAGCCATACGATGGCTGCAATCCTTCAGTGTACAGAGGCCCAATTCT GCTGCCCCGGCAGGCCAACTCGGCGCCGCGGCCGTGCCGCCGGAGATGTCGTCCTCGTCG GGGTCAGGGAGAAGCGCGACGGAGGCGAGAGCNTTGAAGATCCACAGCGAGGCTGNACGG CGGCGGCGAGAGAGGATCAATGCTCATCTGACAACACTGAGGAGAATGATCCCTGATACT AAGCAGGTTTGTGCAAGTTTTTACCGTTGTGAAGCATTCAGAAAGAAAAAAAATATGCAT CAACATCTGAGCCATTTCAGAGAGTTTGCTCGCAGTTCAACTATAAACTTTTTTTGTGAT CTTGTTAGCTAACATAATTGTTGAAGCTAAAGATGAGAGAGGTTAGATATCTATTTAAAA AACTGTTTTTCTGTCGTAGTTCGTGTAGAACTTTGATACTTGCAAGAAAGTCGAAACCAA GAAAAAGTCATCTGAAAGAAATCTTCAGGCTCACATTTGTTCACATTTCAACACTCCTTT TCTAATAAGTTTGGAATTCCCTCACAGGACAAATGCTACAAGCCTAGAATGCCATGACTC CTGAACACAAATTTTCTTAAAAAAATTTCTGCACTGCAGATGGACAAGGCCACCTTGTTA GCCAGAGTGGTGGACCAAGTGAAGGATCTGAAGAGGAAAGCAAGTGAGATCACACAAAGA ACACCTCTCCCTCCAGAGACCAACGAAGTCTCCATCGAATGCTTCACCGGAGACGCTGCC ACCGCCGCCACCACTGTCGCCGGCAACCACAAGACCTTGTACATCAAGGCTTCCATCAGC TGCGACGACCGGCCGGACCTCATCGCCGGGATCACCCACGCATTCCATGGCCTGAGGCTG AGGACGGTCAGAGCAGAGATGACATCACTGGGAGGAAGGGTGCAGCATGTGTTCATATTG TGCAGGGAGGAAGGCATTGCAGGTGGTGTGAGCCTCAAGTCTCTGAAGGAGGCTGTCAGG CAGGCACTAGCCAAGGTTGCCTCTCCTGAATTGGTATATGGCAGCAGTCACTTTCAGAGC AAGAGGCAGAGGATCCTGGAGTCACATTGCTCAATTATGTCCATATAGATTTGTTCCTCT TCTGGGGATTTTGATTTTATTTTTCTACTAGCTGAGAATATGTATGAAATAAGAGAGAGA ATCTTCTTCTTCTGAGAGCTATATAGGCCTGAGAATTGTGTGCCTGAAATTGCTGTGAAA GAATTGATGTCTGAACTGTTGCTAGTGCTAGTGGTTGCAATCAACCGACAAGAAAAAAA



consensusID : consensus_11061#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 587
fasta sequence
                              [TAGCATACCAATTATCATGTACATGAAGTGATCAAATCTCACCCACAAGCATATCTCTCGCACCATTCCACCCTATAGAAACGAGATAACAAGACGCTGTTTGCACTAGCTATTTGACAGCCGACAAGAACCAGTTAGGTAAAACTCAGTAGGATGCAGGTTTGAATGGCTGAATGCCAACCTCTGCAACTGCAAGAAGGCAAGAAACTGCAAGAGCTGCAGCCATACGATGGCTGCAATCCTTCAGTGTACAGAGGCCCAATTCTGCTGCCCCGGCAGGCNCAACTCGGCGCCGCCGGCCGTGCCGCCGGGAGATGTCGTCCTCGTCGGGGTCAGGGAGAAGCGCGACGGAGGCGAGAGCGTTGAAGATCCACAGCGAGGCTGAACGGCGGCGGCGAGAGAGGATCAATGCTCATCTGACAACACTGAGGAGAATGATCCCTGATACTAAGCAGATGGACAA-GGCCACCTTGTTAGCCAGAGTGGTGGACCAAGTGAAGGATCTGAAGA-GGAAAGCAAGTGAGATCACA-CAAAGAACACCTCTCCCTNCAGAGAACCAACGGAATTCTTCCATCGATGCTTCACCG]

[+] EMBL CF315423             [TAGCATACCAATTATCATGTACATGAAGTGATCAAATCTCACCCACAAGCATATCTCTCGCACCATTCCACCCTATAGAAACGAGATAACAAGACGCTGTTTGCACTAGCTATTTGACAGCCGACAAGAACCAGTTAGGTAAAACTCAGTAGGATGCAGGTTTGAATGGCTGAATGCCAACCTCTGCAACTGCAAGAAGGCAAGAAACTGCAAGAGCTGCAGCCATACGATGGCTGCAATCCTTCAGTGTACAGAGGCCCAATTCTGCTGCCCCGGCAGGCNCAACTCGGCGCCGCCGGCCGTGCCGCCGGGAGATGTCGTCCTCGTCGGGGTCAGGGAGAAGCGCGACGGAGGCGAGAGCGTTGAAGATCCACAGCGAGGCTGAACGGCGGCGGCGAGAGAGGATCAATGCTCATCTGACAACACTGAGGAGAATGATCCCTGATACTAAGCAGATGGACAA GGCCACCTTGTTAGCCAGAGTGGTGGACCAAGTGAAGGATCTGAAGA GGAAAGCAAGTGAGATCACA CAAAGAACACCTCTCC                                         ]
[+] EMBL C26093               [               CATGTACATGAAGTGATCAAATCTCACCCACAAGCATATCTCTCGCACCATTCCACCCTATAGAAACGAGATAACAAGACGCTGTTTGCACTAGCTATTTGACAGCCGACAAGAACCAGTTAGGTAAAACTCAGTAGGATGCAGGTTTGAATGGCTGAATGCCAACCTCTGCAACTGCAAGAAGGCAAGAAACTGCAAGAGCTGCAGCCATACGATGGCTGCAATCCTTCAGTGTACAGAGGCCCAATTCTGCTGCCCCGGCAGGC CAACTCGGCGCCGCCGGCCGTGCCGCC GGAGATGTCGTCCTCGTCGGGGTCAGGGAGAAGCGCGACGGAGGCGAGAGCGTTGAAGATCCACAGCGAGGCTGAACGGCGGCGGCGAGAGAGGATCAATGCTCATCTGACAACACTGAGGAGAATGATCCCTGATACTAAGCAGATGGACAAGGGCCACCTTGTTAGCCAGAGTGGTGGACCAAGTGAAGGGTCTGAAGAGGGAAAGCAAGTGAGATCACACCAAAGAACACCTCTTCCTNCAGAGAACCAACGGAATTCTTCCATCGATGCTTCACCG]


>consensus_11061#1 TAGCATACCAATTATCATGTACATGAAGTGATCAAATCTCACCCACAAGCATATCTCTCG CACCATTCCACCCTATAGAAACGAGATAACAAGACGCTGTTTGCACTAGCTATTTGACAG CCGACAAGAACCAGTTAGGTAAAACTCAGTAGGATGCAGGTTTGAATGGCTGAATGCCAA CCTCTGCAACTGCAAGAAGGCAAGAAACTGCAAGAGCTGCAGCCATACGATGGCTGCAAT CCTTCAGTGTACAGAGGCCCAATTCTGCTGCCCCGGCAGGCNCAACTCGGCGCCGCCGGC CGTGCCGCCGGGAGATGTCGTCCTCGTCGGGGTCAGGGAGAAGCGCGACGGAGGCGAGAG CGTTGAAGATCCACAGCGAGGCTGAACGGCGGCGGCGAGAGAGGATCAATGCTCATCTGA CAACACTGAGGAGAATGATCCCTGATACTAAGCAGATGGACAAGGCCACCTTGTTAGCCA GAGTGGTGGACCAAGTGAAGGATCTGAAGAGGAAAGCAAGTGAGATCACACAAAGAACAC CTCTCCCTNCAGAGAACCAACGGAATTCTTCCATCGATGCTTCACCG



consensusID : consensus_11061#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 438
fasta sequence
                              [AAGGCTTCCATCAGCTGCGACGACCGGCCGGACCTCATCGCCGGGATCACCCACGCATTCCATGGCCTGAGGCTGAGGACGGTCAGAGCAGAGATGACATCACTGGGAGGAAGGGTGCAGCATGTGCTCATATTGTGCAGGGAGGAAGGCATTGCAGGTGGTGTGAGCCTCAAGTCTTTGAAGGAGGCTGTCAGGCAGGCACTAGCCAAGGTTGCCTCTCCTGAATTGGTATATGGCAGCAGTCACTTTCAGAGCAAGAGGCAGAGGATCCTGGAGTCACATTGCTCAATTATGTCCATATAGATTTGTTCCTCTTCTGGGGATTTTGATTTTATTTTTCTACTAGCTGAGAATATGTATGAAATAAGAGAGAGAATTTTCTTCTTTTGAGAGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTGTCATGGCGT]

[-] EMBL CF315424             [AAGGCTTCCATCAGCTGCGACGACCGGCCGGACCTCATCGCCGGGATCACCCACGCATTCCATGGCCTGAGGCTGAGGACGGTCAGAGCAGAGATGACATCACTGGGAGGAAGGGTGCAGCATGTGCTCATATTGTGCAGGGAGGAAGGCATTGCAGGTGGTGTGAGCCTCAAGTCTTTGAAGGAGGCTGTCAGGCAGGCACTAGCCAAGGTTGCCTCTCCTGAATTGGTATATGGCAGCAGTCACTTTCAGAGCAAGAGGCAGAGGATCCTGGAGTCACATTGCTCAATTATGTCCATATAGATTTGTTCCTCTTCTGGGGATTTTGATTTTATTTTTCTACTAGCTGAGAATATGTATGAAATAAGAGAGAGAATTTTCTTCTTTTGAGAGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTGTCATGGCGT]


>consensus_11061#2 AAGGCTTCCATCAGCTGCGACGACCGGCCGGACCTCATCGCCGGGATCACCCACGCATTC CATGGCCTGAGGCTGAGGACGGTCAGAGCAGAGATGACATCACTGGGAGGAAGGGTGCAG CATGTGCTCATATTGTGCAGGGAGGAAGGCATTGCAGGTGGTGTGAGCCTCAAGTCTTTG AAGGAGGCTGTCAGGCAGGCACTAGCCAAGGTTGCCTCTCCTGAATTGGTATATGGCAGC AGTCACTTTCAGAGCAAGAGGCAGAGGATCCTGGAGTCACATTGCTCAATTATGTCCATA TAGATTTGTTCCTCTTCTGGGGATTTTGATTTTATTTTTCTACTAGCTGAGAATATGTAT GAAATAAGAGAGAGAATTTTCTTCTTTTGAGAGCTAAAAAAAAAAAAAAAAAAAAAAAAA AAAACACTGTCATGGCGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11061#0      AGTGATCAAATCTCACCCACAAGCATATCTCTCGCACCATTCCACCCTATAGAAACGAGA 60
consensus_11061#2      ------------------------------------------------------------
consensus_11061#1      ------------------------------------------------------------
                                                                                   

consensus_11061#0      TAACAAGACGCTGTTTGCACTAGCTATTTGACAGCCGACAAGAACCAGTTAGGTAAAACT 120
consensus_11061#2      ------------------------------------------------------------
consensus_11061#1      ------------------------------------------------------------
                                                                                   

consensus_11061#0      CAGTAGGATGCAGGTTTGAATGGCTGAATGCCAACCTCTGCAACTGCAAGAAGGCAAGAA 180
consensus_11061#2      ------------------------------------------------------------
consensus_11061#1      ------------------------------------------------------------
                                                                                   

consensus_11061#0      ACTGCAAGAGCTGCAGCCATACGATGGCTGCAATCCTTCAGTGTACAGAGGCCCAATTCT 240
consensus_11061#2      ------------------------------------------------------------
consensus_11061#1      ------------------------------------------------------------
                                                                                   

consensus_11061#0      GCTGCCCCGGCAGGCCAACTCGGCGCCGCGGCCGTGCCGCCGGAGATGTCGTCCTCGTCG 300
consensus_11061#2      ------------------------------------------------------------
consensus_11061#1      ------------------------------------------------------------
                                                                                   

consensus_11061#0      GGGTCAGGGAGAAGCGCGACGGAGGCGAGAGCNTTGAAGATCCACAGCGAGGCTGNACGG 360
consensus_11061#2      ------------------------------------------------------------
consensus_11061#1      ------------------------------------------------------------
                                                                                   

consensus_11061#0      CGGCGGCGAGAGAGGATCAATGCTCATCTGACAACACTGAGGAGAATGATCCCTGATACT 420
consensus_11061#2      ------------------------------------------------------------
consensus_11061#1      ------------------------------------------------------------
                                                                                   

consensus_11061#0      AAGCAGGTTTGTGCAAGTTTTTACCGTTGTGAAGCATTCAGAAAGAAAAAAAATATGCAT 480
consensus_11061#2      ------------------------------------------------------------
consensus_11061#1      ------------------------------------------------------------
                                                                                   

consensus_11061#0      CAACATCTGAGCCATTTCAGAGAGTTTGCTCGCAGTTCAACTATAAACTTTTTTTGTGAT 540
consensus_11061#2      ------------------------------------------------------------
consensus_11061#1      ------------------------------------------------------------
                                                                                   

consensus_11061#0      CTTGTTAGCTAACATAATTGTTGAAGCTAAAGATGAGAGAGGTTAGATATCTATTTAAAA 600
consensus_11061#2      ------------------------------------------------------------
consensus_11061#1      ------------------------------------------------------------
                                                                                   

consensus_11061#0      AACTGTTTTTCTGTCGTAGTTCGTGTAGAACTTTGATACTTGCAAGAAAGTCGAAACCAA 660
consensus_11061#2      ------------------------------------------------------------
consensus_11061#1      ------------------------------------------------------------
                                                                                   

consensus_11061#0      GAAAAAGTCATCTGAAAGAAATCTTCAGGCTCACATTTGTTCACATTTCAACACTCCTTT 720
consensus_11061#2      ------------------------------------------------------------
consensus_11061#1      ------------------------------------------------------------
                                                                                   

consensus_11061#0      TCTAATAAGTTTGGAATTCCCTCACAGGACAAATGCTACAAGCCTAGAATGCCATGACTC 780
consensus_11061#2      ------------------------------------------------------------
consensus_11061#1      ------------------------------------------------------------
                                                                                   

consensus_11061#0      CTGAACACAAATTTTCTTAAAAAAATTTCTGCACTGCAGATGGACAAGGCCACCTTGTTA 840
consensus_11061#2      ------------------------------------------------------------
consensus_11061#1      ------------------------------------------------------------
                                                                                   

consensus_11061#0      GCCAGAGTGGTGGACCAAGTGAAGGATCTGAAGAGGAAAGCAAGTGAGATCACACAAAGA 900
consensus_11061#2      ------------------------------------------------------------
consensus_11061#1      ------------------------------------------------------------
                                                                                   

consensus_11061#0      ACACCTCTCCCTCCAGAGACCAACGAAGTCTCCATCGAATGCTTCACCGGAGACGCTGCC 960
consensus_11061#2      ------------------------------------------------------------
consensus_11061#1      ----------TAGCATACCAATTATCATGTACATGAAGTGATCAAATCTCACCCACAAGC 50
                                                                                   

consensus_11061#0      ACCGCCGCCACCACTGTCGCCGGCAACCACAAGACCTTGTACATCAAGGCTTCCATCAGC 1020
consensus_11061#2      ---------------------------------------------AAGGCTTCCATCAGC 15
consensus_11061#1      ATATCTCTCGCACCATTCCACCCTATAGAAACGAGATAACAAGACGCTGTTTGCACTAGC 110
                                                                       * ** **  ***

consensus_11061#0      TGC--GACGACCGGCCGGACCTCATCGCCGGGATCACCCACGCATTCCATGGCCTGAGGC 1078
consensus_11061#2      TGC--GACGACCGGCCGGACCTCATCGCCGGGATCACCCACGCATTCCATGGCCTGAGGC 73
consensus_11061#1      TATTTGACAGCCGACAAGAACCAGTTA--GGTAAAACTCAGTAGGATGCAGGTTTGAATG 168
                       *    ***  *** *  ** *   *    ** *  ** **          **  ***   

consensus_11061#0      TGAGGACGGTCAGAGCAGAGATGACATCACTGGGAGGAAGGGTGCAGCATGTGTTCATAT 1138
consensus_11061#2      TGAGGACGGTCAGAGCAGAGATGACATCACTGGGAGGAAGGGTGCAGCATGTGCTCATAT 133
consensus_11061#1      GCTGAATGCCAACCTCTGCAACTGCAAGAAGGCAAGAAACTGCAAGAGCTGCAGCCATAC 228
                          * * *   *   * *  *   **  *  *  ** **  *       **    **** 

consensus_11061#0      TGTGCAGGGAGGAAGGCATTGCA-GGTGGTGTGAGCCTCAAGTCTCTGAAGGAGGCTGTC 1197
consensus_11061#2      TGTGCAGGGAGGAAGGCATTGCA-GGTGGTGTGAGCCTCAAGTCTTTGAAGGAGGCTGTC 192
consensus_11061#1      GATGGCTGCAATCCTTCAGTGTACAGAGGCCCAATTCTGCTGCCCCGGCAGGCNCAACTC 288
                         **   * *      ** ** *  * **    *  **   * *   * ***      **

consensus_11061#0      AG----GCAGGCACTAGC-CAAGGTTGCCTCTCCTGAATTGGTATATGGCAGCAGTCACT 1252
consensus_11061#2      AG----GCAGGCACTAGC-CAAGGTTGCCTCTCCTGAATTGGTATATGGCAGCAGTCACT 247
consensus_11061#1      GGCGCCGCCGGCCGTGCCGCCGGGAGATGTCGTCCTCGTCGGGGTCAGGGAGAAG-CGCG 347
                        *    ** ***  *  * *  **     **  *    * **  *  ** ** ** * * 

consensus_11061#0      TTCAGAGCAAGAG-GCAGAGGATCCTGGAGTCACATTGCTCAATTATGTCCATATAGATT 1311
consensus_11061#2      TTCAGAGCAAGAG-GCAGAGGATCCTGGAGTCACATTGCTCAATTATGTCCATATAGATT 306
consensus_11061#1      ACGGAGGCGAGAGCGTTGAAGATCC-ACAGCGAGGCTGAACGGCGGCGGCGAGAGAGGAT 406
                             ** **** *  ** *****   **  *   **  *      * * * * **  *

consensus_11061#0      TGTTCCTCTTCTGGGGATTTTGATTTTATTTTTCTACTA-GCTGAGAATATGTATGAAAT 1370
consensus_11061#2      TGTTCCTCTTCTGGGGATTTTGATTTTATTTTTCTACTA-GCTGAGAATATGTATGAAAT 365
consensus_11061#1      CAATGCTCATCTGACAACACTGAGGAGAATGATCCCTGATACTAAGCAGATGGACAAGGC 466
                          * *** ****   *   ***    * *  **    *  ** ** * *** *  *   

consensus_11061#0      AAG------AGAGAGAATCTTCTTCT---TCTGAGAGCTATATAGGCCTGAGAATTGTG- 1420
consensus_11061#2      AAG------AGAGAGAATTTTCTTCT---TTTGAGAGCTA-AAAAAAAAAAAAAAAAAA- 414
consensus_11061#1      CACCTTGTTAGCCAGAGTGGTGGACCAAGTGAAGGATCTGAAGAGGAAAGCAAGTGAGAT 526
                        *       **  *** *  *   *    *    ** **  * *        *       

consensus_11061#0      -TGCCTGAAATTGC-TGTGAAAGAATTGATGTCTGAACTGTTGCTAGTGCTAGTGGTTGC 1478
consensus_11061#2      -AAAAAAAAAACAC-TGTCATGGCGT---------------------------------- 438
consensus_11061#1      CACACAAAGAACACCTCTCCCTNCAGAGAACCAACGGAATTCTTCCATCGATGCTTCACC 586
                              * *   * * *                                          

consensus_11061#0      AATCAACCGACAAGAAAAAAA 1499
consensus_11061#2      ---------------------
consensus_11061#1      G-------------------- 587
                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)