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Oryza sativa
cluster # 11064 cluster # 11064       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11064#0 length = 1305 sequences # 2  
consensus_11064#1 length = 1189 sequences # 5  
consensus_11064#2 length = 122 sequences # 1  

consensusID : consensus_11064#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1305
fasta sequence
                              [ATGGACTGAAGGAGTAGAAAATCGGCGCCTCAAATCCCCAGTCGACCAGGGTGCTCCCAACAAGAATCCCACCGCCACCGGTCGCCATGGCTGCGGTCGCCAACACCGTCACAACCCTCCCCCTCCTTCCCTCCCCTCATGCCTTCGCCGTGCCCGCAATGGGCTCGCTGCCCTTCCTCCGGCGCCGAATGCGCTCCCGTCGCCTCGCCGCTGTCCAGCAGGATGCGGCCGTCTGGACCCCCGCCCCCGTCTCCTCCTTCGGCCCAGCCCACCGCCGACGGCTCGCTCGTCCACTTCTCCGTGGACCTCTCCGACGCTACCGACCTCGCCGCATCCTACACCACGCCGGGGCAGTATCTCCTAATCCGCGTCCCCGGCGAGGATGAGCTCAAACCGGCGTTCATGGCCATCGCCTCGCCGCCTGGGGGTGCCGCGTTCGAGTTCTTGGTCAAGACCGTACCTGGTACCACGGCGGAGAAGCCTGTGTGGGCTCCGCGACGGGGACGTGCTGGAGCTTGGCGCGATAATGGGTAATGGGTTCCCCATCAGCAGGATAAATCCGCCCGATGAGGCGCAAACTGTGCTCCTCTTTGCTACAGGGACCGGGATCAGTCCGGTTCGGTCACTTATTGAGTTTGGTTTTGCTGCGGATCAAAGAGCTGATGTACGACTTTATTACGGTGCCAGAAATCTCCAAACAATGGCATATCAGGATAGGTTTACAAACTGGGAGTCAACTGGGCTTAAAATAATACCGGTATTGTCACGAGCAGATGATAGTTGGAAAGGAGAACGGGGATATGTTCAGGATGCTTTCTTGAAAGCCCAGAACATAGCAAATCATTTTTCTACTGGGGCAGTGCTCTGTGGACAAAAACAAATGTCTGAGGAGATCACATCAGCCCTTGTAGCAGATGGTGTATCACCAGATAAAATCTTGACCAACTATTAGCAAGGATTGGCGAGCCTCCTGTAAAGCTCAGTGCTTCCTTTGGCCTCAAGATGTTCTTTTTTCTGTTGTATTTTAGCTGTTCTCGTCCTATAGTTTTTTATATTTCTCAGCACATAGATATGTATACATTATAATCATTCTTCAGAGTATGGCCACCTTTTCAGGCCATGTAAGCATTGAGCTCCAGGCTTATTTGCAGTTATGCGGTCCCTTGCGGAACTTGCAAATAGCAGAGTAACATTTGGCAACTCTTCGGCTCTTGTATTATTGGCAAGAGAACATGGTGGTGTTTGGTTCAATAATGTTAACGTAAACGTAATTGGGAATGCTTCCGCCGGTAACCGATTACGTGC]

[+] EMBL CF317858             [ATGGACTGAAGGAGTAGAAAATCGGCGCCTCAAATCCCCAGTCGACCAGGGTGCTCCCAACAAGAATCCCACCGCCACCGGTCGCCATGGCTGCGGTCGCCAACACCGTCACAACCCTCCCCCTCCTTCCCTCCCCTCATGCCTTCGCCGTGCCCGCAATGGGCTCGCTGCCCTTCCTCCGGCGCCGAATGCGCTCCCGTCGCCTCGCCGCTGTCCAGCAGGATGCGGCCGTCTGGACCCCCGCCCCCGTCTCCTCCTTCGGCCCAGCCCACCGCCGACGGCTCGCTCGTCCACTTCTCCGTGGACCTCTCCGACGCTACCGACCTCGCCGCATCCTACACCACGCCGGGGCAGTATCTCCTAATCCGCGTCCCCGGCGAGGATGAGCTCAAACCGGCGTTCATGGCCATCGCCTCGCCGCCTGGGGGTGCCGCGTTCGAGTTCTTGGTCAAGACCGTACCTGGTACCACGGCGGAGAAGCCTGTGTGGGCTCCGCGACGGGGACGTGCTGGAGCTTGGCGCGATAATGGGTAATGGGTTCCCCATCAGCAGGATAAATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK068505             [                            CTCAAATCCCCAGTCGACCAGGGTGCTCCCAACAAGAATCCCACCGCCACCGGTCGCCATGGCTGCGGTCGCCAACACCGTCACAACCCTCCCCCTCCTTCCCTCCCCTCATGCCTTCGCCGTGCCCGCAATGGGCTCGCTGCCCTTCCTCCGGCGCCGAATGCGCTCCCGTCGCCTCGCCGCTGTCCAGCAGGATGCGGCCGTCTGGACCCCCGCCCCCGTCTCCTCCTTCGGCCCAG CCACCGCCGACGGCTCGCTCGTCCACTTCTCCGTGGACCTCTCCGACGCTACCGACCTCGCCGCATCCTACACCACGCCGGGGCAGTATCTCCTAATCCGCGTCCCCGGCGAGGATGAGCTCAAACCGGCGTTCATGGCCATCGCCTCGCCGCCTGGGGGTGCCGCGTTCGAGTTCTTGGTCAAGACCGTACCTGGTACCACGGCGGAGAAG CTGTGTGGGCTCCGCGACGGGGACGTGCTGGAGCTTGGCGCGATAATGGGTAATGGGTTCCCCATCAGCAGGATAAATCCGCCCGATGAGGCGCAAACTGTGCTCCTCTTTGCTACAGGGACCGGGATCAGTCCGGTTCGGTCACTTATTGAGTTTGGTTTTGCTGCGGATCAAAGAGCTGATGTACGACTTTATTACGGTGCCAGAAATCTCCAAACAATGGCATATCAGGATAGGTTTACAAACTGGGAGTCAACTGGGCTTAAAATAATACCGGTATTGTCACGAGCAGATGATAGTTGGAAAGGAGAACGGGGATATGTTCAGGATGCTTTCTTGAAAGCCCAGAACATAGCAAATCATTTTTCTACTGGGGCAGTGCTCTGTGGACAAAAACAAATGTCTGAGGAGATCACATCAGCCCTTGTAGCAGATGGTGTATCACCAGATAAAATCTTGACCAACTATTAGCAAGGATTGGCGAGCCTCCTGTAAAGCTCAGTGCTTCCTTTGGCCTCAAGATGTTCTTTTTTCTGTTGTATTTTAGCTGTTCTCGTCCTATAGTTTTTTATATTTCTCAGCACATAGATATGTATACATTATAATCATTCTTCAGAGTATGGCCACCTTTTCAGGCCATGTAAGCATTGAGCTCCAGGCTTATTTGCAGTTATGCGGTCCCTTGCGGAACTTGCAAATAGCAGAGTAACATTTGGCAACTCTTCGGCTCTTGTATTATTGGCAAGAGAACATGGTGGTGTTTGGTTCAATAATGTTAACGTAAACGTAATTGGGAATGCTTCCGCCGGTAACCGATTACGTGC]


>consensus_11064#0 ATGGACTGAAGGAGTAGAAAATCGGCGCCTCAAATCCCCAGTCGACCAGGGTGCTCCCAA CAAGAATCCCACCGCCACCGGTCGCCATGGCTGCGGTCGCCAACACCGTCACAACCCTCC CCCTCCTTCCCTCCCCTCATGCCTTCGCCGTGCCCGCAATGGGCTCGCTGCCCTTCCTCC GGCGCCGAATGCGCTCCCGTCGCCTCGCCGCTGTCCAGCAGGATGCGGCCGTCTGGACCC CCGCCCCCGTCTCCTCCTTCGGCCCAGCCCACCGCCGACGGCTCGCTCGTCCACTTCTCC GTGGACCTCTCCGACGCTACCGACCTCGCCGCATCCTACACCACGCCGGGGCAGTATCTC CTAATCCGCGTCCCCGGCGAGGATGAGCTCAAACCGGCGTTCATGGCCATCGCCTCGCCG CCTGGGGGTGCCGCGTTCGAGTTCTTGGTCAAGACCGTACCTGGTACCACGGCGGAGAAG CCTGTGTGGGCTCCGCGACGGGGACGTGCTGGAGCTTGGCGCGATAATGGGTAATGGGTT CCCCATCAGCAGGATAAATCCGCCCGATGAGGCGCAAACTGTGCTCCTCTTTGCTACAGG GACCGGGATCAGTCCGGTTCGGTCACTTATTGAGTTTGGTTTTGCTGCGGATCAAAGAGC TGATGTACGACTTTATTACGGTGCCAGAAATCTCCAAACAATGGCATATCAGGATAGGTT TACAAACTGGGAGTCAACTGGGCTTAAAATAATACCGGTATTGTCACGAGCAGATGATAG TTGGAAAGGAGAACGGGGATATGTTCAGGATGCTTTCTTGAAAGCCCAGAACATAGCAAA TCATTTTTCTACTGGGGCAGTGCTCTGTGGACAAAAACAAATGTCTGAGGAGATCACATC AGCCCTTGTAGCAGATGGTGTATCACCAGATAAAATCTTGACCAACTATTAGCAAGGATT GGCGAGCCTCCTGTAAAGCTCAGTGCTTCCTTTGGCCTCAAGATGTTCTTTTTTCTGTTG TATTTTAGCTGTTCTCGTCCTATAGTTTTTTATATTTCTCAGCACATAGATATGTATACA TTATAATCATTCTTCAGAGTATGGCCACCTTTTCAGGCCATGTAAGCATTGAGCTCCAGG CTTATTTGCAGTTATGCGGTCCCTTGCGGAACTTGCAAATAGCAGAGTAACATTTGGCAA CTCTTCGGCTCTTGTATTATTGGCAAGAGAACATGGTGGTGTTTGGTTCAATAATGTTAA CGTAAACGTAATTGGGAATGCTTCCGCCGGTAACCGATTACGTGC



consensusID : consensus_11064#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1189
fasta sequence
                              [TTCCTCGAGCACTGTTGGCCTACTGGAACAAGAATCCCACCGCCACCGGTCGCCATGGCTGCGGTCGCCAACACCGTCACAACCCTCCCCCTCCTTCCCTCCCCTCATGCCTTCGCCGTGCCCGCAATGGGCTCGCTGCCCTTCCTCCGGCGCCGAATGCGCTCCCGTCGCCTCGCCGCTGTCCAGCAGGATGCGGCCGTCTGGACCCCCGCCCCCGTCTCCTCCTTCGGCCCAGCCACCGCCGACGGCTCGCTCGTCCACTTCTCCGTGGACCTCTCCGACGCTACCGACCTCGCCGCATCCTACACCACGCCGGGGCAGTATCTCCTAATCCGCGTCCCCGGCGAGGATGAGCTCAAACCGGCGTTCATGGCCATCGCCTCGCCGCCTGGGGGTGCCGCGTTCGAGTTCTTGGTCAAGACCGTACCTGGTACCACGGCGGAGAAGCTGTGTGGGCTCCGCGACGGGGACGTGCTGGAGCTTGGCGCGATAATGGGTAATGGGTTCCCCATCAGCAGGATAAATCCGCCCGATGAGGCGCAAACTGTGCTCCTCTTTGCTACAGGGACCGGGATCAGTCCGGTTCGGTCACTTATTGAGTTTGGTTTTGCTGCGGATCAAAGAGCTGATGTACGACTTTATTACGGTGCCAGAAATCTCCAAACAATGGCATATCAGGATAGGTTTACAAACTGGGAGTCAACTGGGCTTAAAATAATACCGGTATTGTCACGAGCAGATGATAGTTGGAAAGGAGAACGGGGATATGTTCAGGATGCTTTCTTGAAAGCCCAGAACATAGCAAATCATTTTTCTACTGGGGCAGTGCTCTGTGGACAAAAACAAATGTCTGAGGAGATCACATCAGCCCTTGTAGCAGATGGTGTATCACCAGATAAAATCTTGACCAACTATTAGCAAGGATTGGCGAGCCTCCTGTAAAGCTCAGTGCTTCCTTTGGCCTCAAGATGTTCTTTTTTCTGTTGTATTTTAGCTGTTCTCGTCCTATAGTTTTTTATATTTCTCAGCACATAGATATGTATACATTATAATCATTCTTCAGAGTATGGCCACCTTTTCAGGCCATGTAAGCATTGAGCTCCAGGCTTATTTGCAGTTATGCGGTCCCTTGCGGAACTTGCAAATAGCAGAGTAACATTTGGCAAAAAAAAAAAAAAAGGCCACATGT]

[+] EMBL AK109330             [TTCCTCGAGCACTGTTGGCCTACTGGAACAAGAATCCCACCGCCACCGGTCGCCATGGCTGCGGTCGCCAACACCGTCACAACCCTCCCCCTCCTTCCCTCCCCTCATGCCTTCGCCGTGCCCGCAATGGGCTCGCTGCCCTTCCTCCGGCGCCGAATGCGCTCCCGTCGCCTCGCCGCTGTCCAGCAGGATGCGGCCGTCTGGACCCCCGCCCCCGTCTCCTCCTTCGGCCCAGCCACCGCCGACGGCTCGCTCGTCCACTTCTCCGTGGACCTCTCCGACGCTACCGACCTCGCCGCATCCTACACCACGCCGGGGCAGTATCTCCTAATCCGCGTCCCCGGCGAGGATGAGCTCAAACCGGCGTTCATGGCCATCGCCTCGCCGCCTGGGGGTGCCGCGTTCGAGTTCTTGGTCAAGACCGTACCTGGTACCACGGCGGAGAAGCTGTGTGGGCTCCGCGACGGGGACGTGCTGGAGCTTGGCGCGATAATGGGTAATGGGTTCCCCATCAGCAGGATAAATCCGCCCGATGAGGCGCAAACTGTGCTCCTCTTTGCTACAGGGACCGGGATCAGTCCGGTTCGGTCACTTATTGAGTTTGGTTTTGCTGCGGATCAAAGAGCTGATGTACGACTTTATTACGGTGCCAGAAATCTCCAAACAATGGCATATCAGGATAGGTTTACAAACTGGGAGTCAACTGGGCTTAAAATAATACCGGTATTGTCACGAGCAGATGATAGTTGGAAAGGAGAACGGGGATATGTTCAGGATGCTTTCTTGAAAGCCCAGAACATAGCAAATCATTTTTCTACTGGGGCAGTGCTCTGTGGACAAAAACAAATGTCTGAGGAGATCACATCAGCCCTTGTAGCAGATGGTGTATCACCAGATAAAATCTTGACCAACTATTAGCAAGGATTGGCGAGCCTCCTGTAAAGCTCAGTGCTTCCTTTGGCCTCAAGATGTTCTTTTTTCTGTTGTATTTTAGCTGTTCTCGTCCTATAGTTTTTTATATTTCTCAGCACATAGATATGTATACATTATAATCATTCTTCAGAGTATGGCCACCTTTTCAGGCCATGTAAGCATTGAGCTCCAGGCTTATTTGCAGTTATGCGGTCCCTTGCGGAACTTGCAAATAGCAGAGTAACATTTGGCAAAAAAAAAAAAAAAGGCCACATGT]
[+] EMBL AK104780             [                                   CCCACCGCCACCGGTCGCCATGGCTGCGGTCGCCAACACCGTCACAACCCTCCCCCTCCTTCCCTCCCCTCATGCCTTCGCCGTGCCCGCAATGGGCTCGCTGCCCTTCCTCCGGCGCCGAATGCGCTCCCGTCGCCTCGCCGCTGTCCAGCAGGATGCGGCCGTCTGGACCCCCGCCCCCGTCTCCTCCTTCGGCCCAGCCACCGCCGACGGCTCGCTCGTCCACTTCTCCGTGGACCTCTCCGACGCTACCGACCTCGCCGCATCCTACACCACGCCGGGGCAGTATCTCCTAATCCGCGTCCCCGGCGAGGATGAGCTCAAACCGGCGTTCATGGCCATCGCCTCGCCGCCTGGGGGTGCCGCGTTCGAGTTCTTGGTCAAGACCGTACCTGGTACCACGGCGGAGAAGCTGTGTGGGCTCCGCGACGGGGACGTGCTGGAGCTTGGCGCGATAATGGGTAATGGGTTCCCCATCAGCAGGATAAATCCGCCCGATGAGGCGCAAACTGTGCTCCTCTTTGCTACAGGGACCGGGATCAGTCCGGTTCGGTCACTTATTGAGTTTGGTTTTGCTGCGGATCAAAGAGCTGATGTACGACTTTATTACGGTGCCAGAAATCTCCAAACAATGGCATATCAGGATAGGTTTACAAACTGGGAGTCAACTGGGCTTAAAATAATACCGGTATTGTCACGAGCAGATGATAGTTGGAAAGGAGAACGGGGATATGTTCAGGATGCTTTCTTGAAAGCCCAGAACATAGCAAATCATTTTTCTACTGGGGCAGTGCTCTGTGGACAAAAACAAATGTCTGAGGAGATCACATCAGCCCTTGTAGCAGATGGTGTATCACCAGATAAAATCTTGACCAACTATTAGCAAGGATTGGCGAGCCTCCTGTAAAGCTCAGTGCTTCCTTTGGCCTCAAGATGTTCTTTTTTCTGTTGTATTTTAGCTGTTCTCGTCCTATAGTTTTTTATATTTCTCAGCACATAGATATGTATACATTATAATCATTCTTCAGAGTATGGCCACCTTTTCAGGCCATGTAAGCATTGAGCTCCAGGCTTATTTGCAGTTATGCGGTCCCTTGCGGAACTTGCAAATAGCAGAGT                                   ]
[+] EMBL AU070404             [                                            ACCGGTCGCCATGGCTGCGGTCGCCAACACCGTCACAACCCTCCCCCTCCTTCCCTCCCCTCATGCCTTCGCCGTGCCCGCAATGGGCTCGCTGCCCTTCCTCCGGCGCCGAATGCGCTCCCGTCGCCTCGCCGCTGTCCAGCAGGATGCGGCCGTCTGGACCCCCGCCCCCGTCTCCTCCTTCGGCCCAGCCACCGCCGACNGCTCGCTCGTCCACTTCTCCGTGGACCTCTCCGACGCTACCGACCTCGCCGCATCCTACACCACGCCGGGGCAGTATCTCCTAATCCGCGTCCCCGGCGAGGATGAGCTCAAACCGGCGTTCATGGCCATCGCCTCGCCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CA754000             [                                                    CCATGGCTGCGGTCGCCAACACCGTCACAACCCTCCCCCTCCTTCCCTCCCCTCATGCCTTCGCCGTGCCCGCAATGGGCTCGCTGCCCTTCCTCCGGCGCCGAATGCGCTCCCGTCGCCTCGCCGCTGTCCAGCAGGATGCGGCCGTCTGGACCCCCGCCCCCGTCTCCTCCTTCGGNCCAGCCACCGCCGACGGCTCGCTCGTCCACTTCTCCGTGGACCTCTCCGACGCTACCGACCTCGCCGCATCCTACACCACGCCGGGGCAGTATCTCCTAATCCGCGTCCCCGGCGAGGATGAGCTCAAACCGGCGTTCATGGCCATCGCCTCGCCGCCTGGGGGTGCCGCGTTCGAGTTCTTGGTCAAGACCGTACCTGGTACCACGGCGGAGAAGCTGTGTGGGCTCCGCGACGGGGACGTGCTGGAGCTTGGCGCGATAATGGGTAATGGGTTCCCCATCAGCAGGATAAATCCGCCCGATGAGGCGCAAACTGTGCTCCTCTTTGCTACAGGGACCGGGATCAGTCCGGNTCGGNCACTTATTGAGTTTGGNTTTGCTGCGGATCAAAGAGCTGATGTACGACTTTATTACGGTGCC GAAATCTCCNAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CF337313             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CAGAAATCTCCAAACAATGGCATATC     AGGTTTACAAACTGGGAGTCAACTGGGCTTAAAATAATACCGGTATTGTCACGAGCAGATGATAGTTGGAAAGGAGAACGGGGATATGTTCAGGATGCTTTCTTGAAAGCCCAGAACATAGCAAATCATTTTTCTACTGGGGCAGTGCTCTGTGGACAAAAACAAATGTCTGAGGAAATCACATCAGCCCTTGTAGCAGATGGTGTATCACCAGATAAAATCTTGACCAACTATTAGCAAGGATTGGCGAGCCTCCTGTAAAGCTCAGTGCTTCCTTTGGCCTCAAGATGTTCTTTTTTCTGTTGTATTTTAGCTGTTCTCGTCCTATAGTTTTTTATATTTCTCAGCACATAGATATGTATACATTATAATCATTCTTCAGAGTATGGCCACCTTTTCAGGCCATGTAAGCATTGAGCTCCAGGCTTATTTGCAGTTATGCGGTCCCTTGCGGAACTTGCAAATAGCAGAGTAACA      AAAAAAAA                 ]


>consensus_11064#1 TTCCTCGAGCACTGTTGGCCTACTGGAACAAGAATCCCACCGCCACCGGTCGCCATGGCT GCGGTCGCCAACACCGTCACAACCCTCCCCCTCCTTCCCTCCCCTCATGCCTTCGCCGTG CCCGCAATGGGCTCGCTGCCCTTCCTCCGGCGCCGAATGCGCTCCCGTCGCCTCGCCGCT GTCCAGCAGGATGCGGCCGTCTGGACCCCCGCCCCCGTCTCCTCCTTCGGCCCAGCCACC GCCGACGGCTCGCTCGTCCACTTCTCCGTGGACCTCTCCGACGCTACCGACCTCGCCGCA TCCTACACCACGCCGGGGCAGTATCTCCTAATCCGCGTCCCCGGCGAGGATGAGCTCAAA CCGGCGTTCATGGCCATCGCCTCGCCGCCTGGGGGTGCCGCGTTCGAGTTCTTGGTCAAG ACCGTACCTGGTACCACGGCGGAGAAGCTGTGTGGGCTCCGCGACGGGGACGTGCTGGAG CTTGGCGCGATAATGGGTAATGGGTTCCCCATCAGCAGGATAAATCCGCCCGATGAGGCG CAAACTGTGCTCCTCTTTGCTACAGGGACCGGGATCAGTCCGGTTCGGTCACTTATTGAG TTTGGTTTTGCTGCGGATCAAAGAGCTGATGTACGACTTTATTACGGTGCCAGAAATCTC CAAACAATGGCATATCAGGATAGGTTTACAAACTGGGAGTCAACTGGGCTTAAAATAATA CCGGTATTGTCACGAGCAGATGATAGTTGGAAAGGAGAACGGGGATATGTTCAGGATGCT TTCTTGAAAGCCCAGAACATAGCAAATCATTTTTCTACTGGGGCAGTGCTCTGTGGACAA AAACAAATGTCTGAGGAGATCACATCAGCCCTTGTAGCAGATGGTGTATCACCAGATAAA ATCTTGACCAACTATTAGCAAGGATTGGCGAGCCTCCTGTAAAGCTCAGTGCTTCCTTTG GCCTCAAGATGTTCTTTTTTCTGTTGTATTTTAGCTGTTCTCGTCCTATAGTTTTTTATA TTTCTCAGCACATAGATATGTATACATTATAATCATTCTTCAGAGTATGGCCACCTTTTC AGGCCATGTAAGCATTGAGCTCCAGGCTTATTTGCAGTTATGCGGTCCCTTGCGGAACTT GCAAATAGCAGAGTAACATTTGGCAAAAAAAAAAAAAAAGGCCACATGT



consensusID : consensus_11064#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 122
fasta sequence
                              [CAGAGGACGAGACAAGGGGCACATAGATATGTATACATTACTAATCATTCTTCAGAGTATGGCCACCTTTTCAGGCCATGTAAGCATTGAGCTCCAGGCTTATTTGCAAAAAAAAAAAAAAA]

[+] EMBL CA765588             [CAGAGGACGAGACAAGGGGCACATAGATATGTATACATTACTAATCATTCTTCAGAGTATGGCCACCTTTTCAGGCCATGTAAGCATTGAGCTCCAGGCTTATTTGCAAAAAAAAAAAAAAA]


>consensus_11064#2 CAGAGGACGAGACAAGGGGCACATAGATATGTATACATTACTAATCATTCTTCAGAGTAT GGCCACCTTTTCAGGCCATGTAAGCATTGAGCTCCAGGCTTATTTGCAAAAAAAAAAAAA AA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11064#0      ATGGACTGAAGGAGTAGAAAATCGGCGCCTCAAATCCCCAGTCGACCAGGGTGCTCCCAA 60
consensus_11064#1      -------------------------TTCCTCGAGCACT--GTTGGCC----TACTGG-AA 28
consensus_11064#2      ------------------------------------------------------------
                                                                                   

consensus_11064#0      CAAGAATCCCACCGCCACCGGTCGCCATGGCTGCGGTCGCCAACACCGTCACAACCCTCC 120
consensus_11064#1      CAAGAATCCCACCGCCACCGGTCGCCATGGCTGCGGTCGCCAACACCGTCACAACCCTCC 88
consensus_11064#2      ------------------------------------------------------------
                                                                                   

consensus_11064#0      CCCTCCTTCCCTCCCCTCATGCCTTCGCCGTGCCCGCAATGGGCTCGCTGCCCTTCCTCC 180
consensus_11064#1      CCCTCCTTCCCTCCCCTCATGCCTTCGCCGTGCCCGCAATGGGCTCGCTGCCCTTCCTCC 148
consensus_11064#2      ------------------------------------------------------------
                                                                                   

consensus_11064#0      GGCGCCGAATGCGCTCCCGTCGCCTCGCCGCTGTCCAGCAGGATGCGGCCGTCTGGACCC 240
consensus_11064#1      GGCGCCGAATGCGCTCCCGTCGCCTCGCCGCTGTCCAGCAGGATGCGGCCGTCTGGACCC 208
consensus_11064#2      ------------------------------------------------------------
                                                                                   

consensus_11064#0      CCGCCCCCGTCTCCTCCTTCGGCCCAGCCCACCGCCGACGGCTCGCTCGTCCACTTCTCC 300
consensus_11064#1      CCGCCCCCGTCTCCTCCTTCGGCCCAGCC-ACCGCCGACGGCTCGCTCGTCCACTTCTCC 267
consensus_11064#2      ------------------------------------------------------------
                                                                                   

consensus_11064#0      GTGGACCTCTCCGACGCTACCGACCTCGCCGCATCCTACACCACGCCGGGGCAGTATCTC 360
consensus_11064#1      GTGGACCTCTCCGACGCTACCGACCTCGCCGCATCCTACACCACGCCGGGGCAGTATCTC 327
consensus_11064#2      ------------------------------------------------------------
                                                                                   

consensus_11064#0      CTAATCCGCGTCCCCGGCGAGGATGAGCTCAAACCGGCGTTCATGGCCATCGCCTCGCCG 420
consensus_11064#1      CTAATCCGCGTCCCCGGCGAGGATGAGCTCAAACCGGCGTTCATGGCCATCGCCTCGCCG 387
consensus_11064#2      ------------------------------------------------------------
                                                                                   

consensus_11064#0      CCTGGGGGTGCCGCGTTCGAGTTCTTGGTCAAGACCGTACCTGGTACCACGGCGGAGAAG 480
consensus_11064#1      CCTGGGGGTGCCGCGTTCGAGTTCTTGGTCAAGACCGTACCTGGTACCACGGCGGAGAAG 447
consensus_11064#2      ------------------------------------------------------------
                                                                                   

consensus_11064#0      CCTGTGTGGGCTCCGCGACGGGGACGTGCTGGAGCTTGGCGCGATAATGGGTAATGGGTT 540
consensus_11064#1      C-TGTGTGGGCTCCGCGACGGGGACGTGCTGGAGCTTGGCGCGATAATGGGTAATGGGTT 506
consensus_11064#2      ------------------------------------------------------------
                                                                                   

consensus_11064#0      CCCCATCAGCAGGATAAATCCGCCCGATGAGGCGCAAACTGTGCTCCTCTTTGCTACAGG 600
consensus_11064#1      CCCCATCAGCAGGATAAATCCGCCCGATGAGGCGCAAACTGTGCTCCTCTTTGCTACAGG 566
consensus_11064#2      ------------------------------------------------------------
                                                                                   

consensus_11064#0      GACCGGGATCAGTCCGGTTCGGTCACTTATTGAGTTTGGTTTTGCTGCGGATCAAAGAGC 660
consensus_11064#1      GACCGGGATCAGTCCGGTTCGGTCACTTATTGAGTTTGGTTTTGCTGCGGATCAAAGAGC 626
consensus_11064#2      ------------------------------------------------------------
                                                                                   

consensus_11064#0      TGATGTACGACTTTATTACGGTGCCAGAAATCTCCAAACAATGGCATATCAGGATAGGTT 720
consensus_11064#1      TGATGTACGACTTTATTACGGTGCCAGAAATCTCCAAACAATGGCATATCAGGATAGGTT 686
consensus_11064#2      ------------------------------------------------------------
                                                                                   

consensus_11064#0      TACAAACTGGGAGTCAACTGGGCTTAAAATAATACCGGTATTGTCACGAGCAGATGATAG 780
consensus_11064#1      TACAAACTGGGAGTCAACTGGGCTTAAAATAATACCGGTATTGTCACGAGCAGATGATAG 746
consensus_11064#2      ------------------------------------------------------------
                                                                                   

consensus_11064#0      TTGGAAAGGAGAACGGGGATATGTTCAGGATGCTTTCTTGAAAGCCCAGAACATAGCAAA 840
consensus_11064#1      TTGGAAAGGAGAACGGGGATATGTTCAGGATGCTTTCTTGAAAGCCCAGAACATAGCAAA 806
consensus_11064#2      ------------------------------------------------------------
                                                                                   

consensus_11064#0      TCATTTTTCTACTGGGGCAGTGCTCTGTGGACAAAAACAAATGTCTGAGGAGATCACATC 900
consensus_11064#1      TCATTTTTCTACTGGGGCAGTGCTCTGTGGACAAAAACAAATGTCTGAGGAGATCACATC 866
consensus_11064#2      ------------------------------------------------------------
                                                                                   

consensus_11064#0      AGCCCTTGTAGCAGATGGTGTATCACCAGATAAAATCTTGACCAACTATTAGCAAGGATT 960
consensus_11064#1      AGCCCTTGTAGCAGATGGTGTATCACCAGATAAAATCTTGACCAACTATTAGCAAGGATT 926
consensus_11064#2      ------------------------------------------------------------
                                                                                   

consensus_11064#0      GGCGAGCCTCCTGTAAAGCTCAGTGCTTCCTTTGGCCTCAAGATGTTCTTTTTTCTGTTG 1020
consensus_11064#1      GGCGAGCCTCCTGTAAAGCTCAGTGCTTCCTTTGGCCTCAAGATGTTCTTTTTTCTGTTG 986
consensus_11064#2      ------------------------------------------------------------
                                                                                   

consensus_11064#0      TATTTTAGCTGTTCTCGTCCTATAGTTTTTTATATTTCTCAGCACATAGATATGTATACA 1080
consensus_11064#1      TATTTTAGCTGTTCTCGTCCTATAGTTTTTTATATTTCTCAGCACATAGATATGTATACA 1046
consensus_11064#2      --------------------CAGAGGACGAGACAAG---GGGCACATAGATATGTATACA 37
                                            * **      * *       *******************

consensus_11064#0      TTA-TAATCATTCTTCAGAGTATGGCCACCTTTTCAGGCCATGTAAGCATTGAGCTCCAG 1139
consensus_11064#1      TTA-TAATCATTCTTCAGAGTATGGCCACCTTTTCAGGCCATGTAAGCATTGAGCTCCAG 1105
consensus_11064#2      TTACTAATCATTCTTCAGAGTATGGCCACCTTTTCAGGCCATGTAAGCATTGAGCTCCAG 97
                       *** ********************************************************

consensus_11064#0      GCTTATTTGCAGTTATGCGGTCCCTTGCGGAACTTGCAAATAGCAGAGTAACATTTGGCA 1199
consensus_11064#1      GCTTATTTGCAGTTATGCGGTCCCTTGCGGAACTTGCAAATAGCAGAGTAACATTTGGCA 1165
consensus_11064#2      GCTTATTTGCAAAAAAAAAAAAAAA----------------------------------- 122
                       ***********   *                                             

consensus_11064#0      ACTCTTCGGCTCTTGTATTATTGGCAAGAGAACATGGTGGTGTTTGGTTCAATAATGTTA 1259
consensus_11064#1      A-------------AAAAAAAAAAAAAGGCCACATGT----------------------- 1189
consensus_11064#2      ------------------------------------------------------------
                                                                                   

consensus_11064#0      ACGTAAACGTAATTGGGAATGCTTCCGCCGGTAACCGATTACGTGC 1305
consensus_11064#1      ----------------------------------------------
consensus_11064#2      ----------------------------------------------
                                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)