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Oryza sativa
cluster # 11076 cluster # 11076       Sequences # 8       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11076#0 length = 2071 sequences # 5  
 consensus_11076#1 length = 844 sequences # 1  
consensus_11076#2 length = 698 sequences # 2  
consensusID : consensus_11076#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2071
fasta sequence 
                              [TCCTTCTCTCTCTCTCTCTCTCTAGAACGCGCGCAAGAACACGCGCGAGGACTCCCCCCAAACCCCCACTTAATTGCGCGCGAATGGAGTAATACTAGTACTAGTATAATCATTAATTGGTGTTTATGGGAAGTGGTGGTGGTGGTGGTGATCTTGGTGTGGCGCGAGAGGTGAGAGAGGAGGAGAGAGGTGGCGGCGGCGGCGGGATGAGGAAGGCGCGCGTGTGCGTCCGCGCGCCGCACGGCGCCGGCGCGCTGCTCGTCGTCGGCGGCGCGGTCGTAGGCGCCGCCGTCTTCGCGTGGTGCCGCCGCCGCTGCCGAAGTGACGGCGGCGAGGGCGAGGGCGAGCGCAAGGAGGGCGCCAAGAACCACGGCGAGCATCCAGCAAAGGAGGAGGGTGGTTTGGATGGCGGAGTTGTCGAGGGCGAGCAGGGGGACGCGCAGAGGCTTCATCAAATTTATCAGAATCTGAGCAGGGACAACGTCGAGGTTGGAGTCAATGGATCGGATGGCAAGGCAACAGATGAACTTTATCAGATTCAGAAGGATGATGAGGTCGTTCCGAATGGTGATAAGATCGTTCTGTCTGAATTGGTTACTGAAGCTGTGGAGAAATATGATCACGGTTCAATCAAGGACTGTGCGGAGATCGCCCCGGATGGCATGGTTAATGAAGCTGTTGAGACATATAATCACAATTCAGAGAGGGACTGCGCTGAGATCACTGCACATGTTATGGACACAGAAAATGTGACAGAGGATGATGATAATTCAGGCAAAAATGATGCCGAGAATGAGATAATTGTAAATGAAAATGAAGGTGAAGAAAATTCTGCGGAAAACACTTTTAGCCTCAGCAGCC-CTGACATCACC-CTTGAGGAACATGACAACAACAACTGTGTTGATCAAGATACTGCATCAACAGAGACAACACCAACTACAGAGAAGGTGATGCATCAAGAACAAGTCTCAGAGCAGGTGAAGATGGCAGAAACAGCAGAAGTGAAACCGGCAGAAGAAACAGAAACCACACCAATGGTTCAAACAGAAGTGAAACTGGAAGAGGAAACGGAGACCACACCAGTTGCTGAAACAACAGAAGTGAAGCCGGCAGAAGAAACAGAGACCTCAACAGTGGCTGAAACTTTACAGGTGAAACCAGCCGAAGAAACGGATACCACATCCATGGCTGAAACAGCAGAACTGAAGCTGGCAGAAGAAACAGAGACTGCATCAATGGCTGAAACAGCAGAAGTGAAACTCGCAGAAGAAACAGAGACCATACCAATGGCAGAAACAGCAGAAGTGAAACTAGCAGAAGAAAAAGTCATGAAGAAAAATGAGTTTGAACATGAGGAAGAGAATTCTAAGGAAGAATATGTTAAACCGGTCAATTCACTGGCATATTCCTCAGTGCCATCTCTGCTTAAGCGAACGGTGAAGAAAGGGCAGGTGAATCCTAGATGGAATGAGACAGGGATGAAGCTAGAGCAAGATTGCACCAACGGTGAGCTGAATGAGCATGACCTGACCAAAGCAGGAGCTACCGCAATGGGAGGAGCTGTTTTGACCATGGCTCGTAGGCCTGATTCTATGGCCATTCTTGCTCTTATAGTTGCAGTTACCATCGCGATAACTATCGTCGTGCGCCTATATGTTCCTCTGCAAGCAACATGATCTTTAGATGAACCCACGGTAAGTTCGCAAAATGCAACGGAGTTCTTCTCTGATCACTTCAAATTCTGAACTGTATGTATGGAAAATCAACGGAGTCGAATTGTACAAGGGGGAAAAAAGCCTCTACTAGTATGAGTTAATTATAACTCATTGGATAGCCTAAATGCCAGGTGTAACCTGTAGTAGCAAGGCTTAGTATCAAGAGGCAAAAAGAAGATAGTATGTTCAGATCATAGAGTTTCTCCTAAGAGGTAGACTGCTAGTCTTTCTTTTCTGTAGGGTATGTCACTGCTTCAGTGCTGAAGTATCAAAAAAGGTTGCGACAGGGCAACCAGCAACAAAACTATGTTGAAATTGTGATGAACAACATGCAGTTTATACGAATTATTCTTCTC]

[+] EMBL AK069589             [TCCTTCTCTCTCTCTCTCTCTCTAGAACGCGCGCAAGAACACGCGCGAGGACTCCCCCCAAACCCCCACTTAATTGCGCGCGAATGGAGTAATACTAGTACTAGTATAATCATTAATTGGTGTTTATGGGAAGTGGTGGTGGTGGTGGTGATCTTGGTGTGGCGCGAGAGGTGAGAGAGGAGGAGAGAGGTGGCGGCGGCGGCGGGATGAGGAAGGCGCGCGTGTGCGTCCGCGCGCCGCACGGCGCCGGCGCGCTGCTCGTCGTCGGCGGCGCGGTCGTAGGCGCCGCCGTCTTCGCGTGGTGCCGCCGCCGCTGCCGAAGTGACGGCGGCGAGGGCGAGGGCGAGCGCAAGGAGGGCGCCAAGAACCACGGCGAGCATCCAGCAAAGGAGGAGGGTGGTTTGGATGGCGGAGTTGTCGAGGGCGAGCAGGGGGACGCGCAGAGGCTTCATCAAATTTATCAGAATCTGAGCAGGGACAACGTCGAGGTTGGAGTCAATGGATCGGATGGCAAGGCAACAGATGAACTTTATCAGATTCAGAAGGATGATGAGGTCGTTCCGAATGGTGATAAGATCGTTCTGTCTGAATTGGTTACTGAAGCTGTGGAGAAATATGATCACGGTTCAATCAAGGACTGTGCGGAGATCGCCCCGGATGGCATGGTTAATGAAGCTGTTGAGACATATAATCACAATTCAGAGAGGGACTGCGCTGAGATCACTGCACATGTTATGGACACAGAAAATGTGACAGAGGATGATGATAATTCAGGCAAAAATGATGCCGAGAATGAGATAATTGTAAATGAAAATGAAGGTGAAGAAAATTCTGCGGAAAACACTTTTAGCCTCAGCAGCC CTGACATCACC CTTGAGGAACATGACAACAACAACTGTGTTGATCAAGATACTGCATCAACAGAGACAACACCAACTACAGAGAAGGTGATGCATCAAGAACAAGTCTCAGAGCAGGTGAAGATGGCAGAAACAGCAGAAGTGAAACCGGCAGAAGAAACAGAAACCACACCAATGGTTCAAACAGAAGTGAAACTGGAAGAGGAAACGGAGACCACACCAGTTGCTGAAACAACAGAAGTGAAGCCGGCAGAAGAAACAGAGACCTCAACAGTGGCTGAAACTTTACAGGTGAAACCAGCCGAAGAAACGGATACCACATCCATGGCTGAAACAGCAGAACTGAAGCTGGCAGAAGAAACAGAGACTGCATCAATGGCTGAAACAGCAGAAGTGAAACTCGCAGAAGAAACAGAGACCATACCAATGGCAGAAACAGCAGAAGTGAAACTAGCAGAAGAAAAAGTCATGAAGAAAAATGAGTTTGAACATGAGGAAGAGAATTCTAAGGAAGAATATGTTAAACCGGTCAATTCACTGGCATATTCCTCAGTGCCATCTCTGCTTAAGCGAACGGTGAAGAAAGGGCAGGTGAATCCTAGATGGAATGAGACAGGGATGAAGCTAGAGCAAGATTGCACCAACGGTGAGCTGAATGAGCATGACCTGACCAAAGCAGGAGCTACCGCAATGGGAGGAGCTGTTTTGACCATGGCTCGTAGGCCTGATTCTATGGCCATTCTTGCTCTTATAGTTGCAGTTACCATCGCGATAACTATCGTCGTGCGCCTATATGTTCCTCTGCAAGCAACATGATCTTTAGATGAACCCACGGTAAGTTCGCAAAATGCAACGGAGTTCTTCTCTGATCACTTCAAATTCTGAACTGTATGTATGGAAAATCAACGGAGTCGAATTGTACAAGGGGGAAAAAAGCCTCTACTAGTATGAGTTAATTATAACTCATTGGATAGCCTAAATGCCAGGTGTAACCTGTAGTAGCAAGGCTTAGTATCAAGAGGCAAAAAGAAGATAGTATGTTCAGATCATAGAGTTTCTCCTAAGAGGTAGACTGCTAGTCTTTCTTTTCTGTAGGGTATGTCACTGCTTCAGTGCTGAAGTATCAAAAAAGGTTGCGACAGGGCAACCAGCAACAAAACTATGTTGAAATTGTGATGAACAACATGCAGTTTATACGAATTATTCTTCTC]
[+] EMBL CB639789             [                                                                                                                                                                                GAGGAGGAGAGAGGTGGCGGCGGCGGCGGGATGAGGAAGGCGCGCGTGTGCGTCCGCGCGCCGCACGGCGCCGGCGCGCTGCTCGTCGTCGGCGGCGCGGTCGTCGGCGCCGCCGTCTTCGCGTGGTGCCGCCGCCGCTGCCGAAGTGACGGCGGCGAGGGCGAGGGCGAGCGCATTGATGGCGCCAAGAACCACGGCGAGCATCCAGCAAAGGAGGAGGGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB681140             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGATACTTGTAAATGAAAATGAAGGTGAAGAAAATTCTGCGGAAAACACTTTTAGCCTCAGCAGCCACTGACATCACCTCTTGAGGAACATGACAACAACAACTGTGTTGATCAAGATACTGCATCAACAGAGACAACACCAACTACAGAGAAGGTGATGCATCAAGAACAAGTCTCAGAGCAGGTGAAGATGGCAGAAACAGCAGAAGTGAAACCGGCAGAAGAAACAGAAACCACACCAATGGTTCAAACAGAAGTGAAACTGGAAGAGGAAACGGAGACCACACCAGTTGCTGAAACAACAGAAGTGAAGCCGGCAGAAGAAACAGAGACCTCAACAGTGGCTGAAACTTTACAGGTGAAACCAGCCGAAGAAACGGATACCACATCCATGGCTGAAACAGCAGAACTGAAGCTGGCAGAAGAAACAGAGACTGCATCAATGGCTGAAACAGCAGAAGTGAAACTCGCAGAAGAAACAGAGACCATACCAATGGCAGAAACAGCAGAAGTGAAACTAGCAGAAGAAAAAGTCATGAAGAAAAATGAGTTTGAACATGAGGAAGAGAATTCTAAGGAAGAATATGTTAAACCGGTCAATTCACTGGCATATTCCTCAGTGCCATCTCTGCTTAAGCGAACGGTGAAGAAAGGGCAGGTGAATCCTATATGGAATGAGACAGGGATGAAGCTAGAGCAAGATTGCACCAACGGTGAGCTGAATGAGCATGACCTGATCACAGCAGGAGCTACCGCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB681174             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTGAAACTCGCAGAAGAAACAGAGACCATACCAATGGCAGAAACAGCAGAAGTGAAACTAGCAGAAGAAAAAGTCATGAAGAAAAATGAGTTTGAACATGAGGAAGAGAATTCTAAGGAAGAATATGTTAAACCGGTCAATTCACTGGCATATTCCTCAGTGCCATCTCTGCTTAAGCGAACGGTGAAGAAAGGGCAGGTGAATCCTAGATGGAATGAGACAGGGATGAAGCTAGAGCAAGATTGCACCAACGGTGAGCTGAATGAGCATGACCTGACCAAAGCAGGAGCTACCGCAATGGGAGGAGCTGTTTTGACCATGGCTCGTAGGCCTGATTCTATGGCCATTCTTGCTCTTATAGTTGCAGTTACCATCGCGATAACTATCGTCGTGCGCCTATATGTTCCTCTGCAAGCAACATGATCTTTAGATGAACCCACGGTAAGTTCGCAAAATGCAACGGAGTTCTTCTCTGATCACTTCAAATTCTGAACTGTATGTATGGAAAATCAACGGAGTCGAATTGTACAAGGGGGAAAAAAGCCTCTACTAGTATGAGTTAATTATAACTCATTGGATAGCCTAAATGCCAGGTGTAACCTGTAGTAGCAAGGCTTAGTATCAAGAGGCAAAAAGAAGATAGTATGTTCAGATCATAGAGTTTCTCCTAAGAGGTAGACTGCTAGTCTTTCTTTTCTGTAGGGTATGTCACTGCTTCAGTGCTGAAGTATCAAAAAAGGTTGCGACAGGGCAACCAGCAACAAAACTATGTTGAGGTTGTGATGAACAACATGCAGT                    ]
[-] EMBL CB681141             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGTGAATCCTAGATGCAATGAGACAGGGATGAAGATAGAGCAAGATTGCTCCATCGGTGAGCTGAATGAGCATGACCTGACCAAAGCAGGAGCTACCGCAATGGGAGGAGCTGTTTTGTCCATGGCTCGTAGGCCTGATTCTATGGCCATTCTTGCTTTTATAGTTGCAGTTCCCATCGCGATAACTATCGTCGTGCCCCTATATGTTCCTCTGCAAGCAACATGATCTTTAGATGAACCCACGGTAAGTTCGCAAAATGCAACGGAGTTCTTCTCTGATCACTTCAAATTCTGAGCTGTATGTATGGAAAATCAACGGAGTCGAATTGTCCAAGGGGGAAAAAACCCTCTACTAGTATGAGTTAATTATAACTCATCGGATAGCCTAAATGCCAGGTGTACCCTGTAGTAGCAAGGCTTAGTATCAAGAGGCCAAAAGAAGATAGTATGTTCAGATCATAGAGTTTCTCCTAAGAGGTAGCCCGCTAGTCTTTCTTTT                                                                                                                          ]




>consensus_11076#0
TCCTTCTCTCTCTCTCTCTCTCTAGAACGCGCGCAAGAACACGCGCGAGGACTCCCCCCA
AACCCCCACTTAATTGCGCGCGAATGGAGTAATACTAGTACTAGTATAATCATTAATTGG
TGTTTATGGGAAGTGGTGGTGGTGGTGGTGATCTTGGTGTGGCGCGAGAGGTGAGAGAGG
AGGAGAGAGGTGGCGGCGGCGGCGGGATGAGGAAGGCGCGCGTGTGCGTCCGCGCGCCGC
ACGGCGCCGGCGCGCTGCTCGTCGTCGGCGGCGCGGTCGTAGGCGCCGCCGTCTTCGCGT
GGTGCCGCCGCCGCTGCCGAAGTGACGGCGGCGAGGGCGAGGGCGAGCGCAAGGAGGGCG
CCAAGAACCACGGCGAGCATCCAGCAAAGGAGGAGGGTGGTTTGGATGGCGGAGTTGTCG
AGGGCGAGCAGGGGGACGCGCAGAGGCTTCATCAAATTTATCAGAATCTGAGCAGGGACA
ACGTCGAGGTTGGAGTCAATGGATCGGATGGCAAGGCAACAGATGAACTTTATCAGATTC
AGAAGGATGATGAGGTCGTTCCGAATGGTGATAAGATCGTTCTGTCTGAATTGGTTACTG
AAGCTGTGGAGAAATATGATCACGGTTCAATCAAGGACTGTGCGGAGATCGCCCCGGATG
GCATGGTTAATGAAGCTGTTGAGACATATAATCACAATTCAGAGAGGGACTGCGCTGAGA
TCACTGCACATGTTATGGACACAGAAAATGTGACAGAGGATGATGATAATTCAGGCAAAA
ATGATGCCGAGAATGAGATAATTGTAAATGAAAATGAAGGTGAAGAAAATTCTGCGGAAA
ACACTTTTAGCCTCAGCAGCCCTGACATCACCCTTGAGGAACATGACAACAACAACTGTG
TTGATCAAGATACTGCATCAACAGAGACAACACCAACTACAGAGAAGGTGATGCATCAAG
AACAAGTCTCAGAGCAGGTGAAGATGGCAGAAACAGCAGAAGTGAAACCGGCAGAAGAAA
CAGAAACCACACCAATGGTTCAAACAGAAGTGAAACTGGAAGAGGAAACGGAGACCACAC
CAGTTGCTGAAACAACAGAAGTGAAGCCGGCAGAAGAAACAGAGACCTCAACAGTGGCTG
AAACTTTACAGGTGAAACCAGCCGAAGAAACGGATACCACATCCATGGCTGAAACAGCAG
AACTGAAGCTGGCAGAAGAAACAGAGACTGCATCAATGGCTGAAACAGCAGAAGTGAAAC
TCGCAGAAGAAACAGAGACCATACCAATGGCAGAAACAGCAGAAGTGAAACTAGCAGAAG
AAAAAGTCATGAAGAAAAATGAGTTTGAACATGAGGAAGAGAATTCTAAGGAAGAATATG
TTAAACCGGTCAATTCACTGGCATATTCCTCAGTGCCATCTCTGCTTAAGCGAACGGTGA
AGAAAGGGCAGGTGAATCCTAGATGGAATGAGACAGGGATGAAGCTAGAGCAAGATTGCA
CCAACGGTGAGCTGAATGAGCATGACCTGACCAAAGCAGGAGCTACCGCAATGGGAGGAG
CTGTTTTGACCATGGCTCGTAGGCCTGATTCTATGGCCATTCTTGCTCTTATAGTTGCAG
TTACCATCGCGATAACTATCGTCGTGCGCCTATATGTTCCTCTGCAAGCAACATGATCTT
TAGATGAACCCACGGTAAGTTCGCAAAATGCAACGGAGTTCTTCTCTGATCACTTCAAAT
TCTGAACTGTATGTATGGAAAATCAACGGAGTCGAATTGTACAAGGGGGAAAAAAGCCTC
TACTAGTATGAGTTAATTATAACTCATTGGATAGCCTAAATGCCAGGTGTAACCTGTAGT
AGCAAGGCTTAGTATCAAGAGGCAAAAAGAAGATAGTATGTTCAGATCATAGAGTTTCTC
CTAAGAGGTAGACTGCTAGTCTTTCTTTTCTGTAGGGTATGTCACTGCTTCAGTGCTGAA
GTATCAAAAAAGGTTGCGACAGGGCAACCAGCAACAAAACTATGTTGAAATTGTGATGAA
CAACATGCAGTTTATACGAATTATTCTTCTC

consensusID : consensus_11076#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 844
fasta sequence 
                              [ACNNGGGNGAAACTGGGCAGGNGNNACCGGCCAAANAAACAGAGATCACGGCCCTGGCGTGNCACAGCAGGAACTGATGCTGCCAGAANNANCACAGACTGGATCAATGGCTGAAACAGCAGAAGAGAANCNCGNAGANGAAACAGAGACCATTCCAANGNNCGAGNCAGCTNAAGTGNAACTGGCANANGANAAAGCCAGCAAGAAAAATGACNTTTGATGCACGAGGAAGANAATTCTAAGGAAGAATCTGTTAAGCCGNACANTTCACATGGCATACTNCTCAGTGCCATCTCTGCTTAAGCGAACGGNGAAGAAAGGGCAGNTGAATCCTATATGGAATGAGACAGNCATGAANCTAGAGCAAGATTGCACCAACGGTGANCTGAANGANCNTGAGCTGACCTAAGGANGAGCTGCTGCNATGGGAGGAGCTGNTNNGACCATGGNTNGCNGNCCNGATNCTATGGCCATTCTTGCTCTNATAGGTGCAGTNTACCATCGCGATAACTATCGTCGTGCGCCTATATGTTCCTNTGCAAGCAACATGATCTTCAGNTGAACCCACGGCTNAGGTCGCAAANCGCAACAGAGTTCTTCTCTGATCACTTCAAATTCTGGCGCTGTCTGTATGGAAAATCGACAGAGTTGAGCTGTATAAAAGACGGGAAAAGGCCTACTAGCATGAGNTCTACTAGGTCATTTCCTAGCCTGAANGCCAGCTGCATGATGAAATACCAAGNNCTGGTACCANGGAGGCAAAANAGNTAAGAGCTTCAGANTNTAAGGTTTTCTTCTAANTGCTANACTGCTAGTCNTTGTNTTNTGCAAGGTTNCGTACTGC]

[+] EMBL CA764795             [ACNNGGGNGAAACTGGGCAGGNGNNACCGGCCAAANAAACAGAGATCACGGCCCTGGCGTGNCACAGCAGGAACTGATGCTGCCAGAANNANCACAGACTGGATCAATGGCTGAAACAGCAGAAGAGAANCNCGNAGANGAAACAGAGACCATTCCAANGNNCGAGNCAGCTNAAGTGNAACTGGCANANGANAAAGCCAGCAAGAAAAATGACNTTTGATGCACGAGGAAGANAATTCTAAGGAAGAATCTGTTAAGCCGNACANTTCACATGGCATACTNCTCAGTGCCATCTCTGCTTAAGCGAACGGNGAAGAAAGGGCAGNTGAATCCTATATGGAATGAGACAGNCATGAANCTAGAGCAAGATTGCACCAACGGTGANCTGAANGANCNTGAGCTGACCTAAGGANGAGCTGCTGCNATGGGAGGAGCTGNTNNGACCATGGNTNGCNGNCCNGATNCTATGGCCATTCTTGCTCTNATAGGTGCAGTNTACCATCGCGATAACTATCGTCGTGCGCCTATATGTTCCTNTGCAAGCAACATGATCTTCAGNTGAACCCACGGCTNAGGTCGCAAANCGCAACAGAGTTCTTCTCTGATCACTTCAAATTCTGGCGCTGTCTGTATGGAAAATCGACAGAGTTGAGCTGTATAAAAGACGGGAAAAGGCCTACTAGCATGAGNTCTACTAGGTCATTTCCTAGCCTGAANGCCAGCTGCATGATGAAATACCAAGNNCTGGTACCANGGAGGCAAAANAGNTAAGAGCTTCAGANTNTAAGGTTTTCTTCTAANTGCTANACTGCTAGTCNTTGTNTTNTGCAAGGTTNCGTACTGC]




>consensus_11076#1
ACNNGGGNGAAACTGGGCAGGNGNNACCGGCCAAANAAACAGAGATCACGGCCCTGGCGT
GNCACAGCAGGAACTGATGCTGCCAGAANNANCACAGACTGGATCAATGGCTGAAACAGC
AGAAGAGAANCNCGNAGANGAAACAGAGACCATTCCAANGNNCGAGNCAGCTNAAGTGNA
ACTGGCANANGANAAAGCCAGCAAGAAAAATGACNTTTGATGCACGAGGAAGANAATTCT
AAGGAAGAATCTGTTAAGCCGNACANTTCACATGGCATACTNCTCAGTGCCATCTCTGCT
TAAGCGAACGGNGAAGAAAGGGCAGNTGAATCCTATATGGAATGAGACAGNCATGAANCT
AGAGCAAGATTGCACCAACGGTGANCTGAANGANCNTGAGCTGACCTAAGGANGAGCTGC
TGCNATGGGAGGAGCTGNTNNGACCATGGNTNGCNGNCCNGATNCTATGGCCATTCTTGC
TCTNATAGGTGCAGTNTACCATCGCGATAACTATCGTCGTGCGCCTATATGTTCCTNTGC
AAGCAACATGATCTTCAGNTGAACCCACGGCTNAGGTCGCAAANCGCAACAGAGTTCTTC
TCTGATCACTTCAAATTCTGGCGCTGTCTGTATGGAAAATCGACAGAGTTGAGCTGTATA
AAAGACGGGAAAAGGCCTACTAGCATGAGNTCTACTAGGTCATTTCCTAGCCTGAANGCC
AGCTGCATGATGAAATACCAAGNNCTGGTACCANGGAGGCAAAANAGNTAAGAGCTTCAG
ANTNTAAGGTTTTCTTCTAANTGCTANACTGCTAGTCNTTGTNTTNTGCAAGGTTNCGTA
CTGC

consensusID : consensus_11076#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 698
fasta sequence 
                              [ACAAGGGGTGAAGCTAGAGCAAGATTGCACCAACGGTGAGCTGAATGAGCATGAGCTGACCAAAGGAGGAGCTGCTGCAATGGGAGGAGCTGTTTTGACCATGGCTCGTAGGCCTGATTCTATGGCCATTCTTGCTCTNATAGTTGCAGTTACCAT-CGCGATAACTATCGTCGTGCGCCTATATGTTCCTCTGCAAGCAACATGATCTTCAGATGAACCCACGGTAAGTTCGCAAAACGCAACAGAGTTCTTCTCTGATCACTTCAAATTTTGAGCTGTATGTATGGAAAATCGACAGAGTTGAGTTGTATAAAGACGGGAAAAGGCCTACTAGTATGAGTTCTACTAGTTCATTTCCTAGCCTGAATGCCAGCTGTATGATGAAATAGCAAGGCCTGGTACCAAGAGGCAAAAGAAGATAAGAGGTTCAGATTAATAGTTTTTCTTCTAAGTGGTAGACTGCTAGTCTTTGTTTTCTGTAGGGTACGTCACTGCTTCAGTGCTGAAGAACATCACAAAGGTTGCGACAGGGCGACCAGCAATAAAACTATGTTGAAATTGTGATGAACAACATGGCAGTTTATCTTAATTGTTCTTCTCTTTTAAAAAAAAAAATCACCCTTGTTAGTAATCTGTAGTTTATCCTCTATTCTTGAAATGAATCAATAATCTAAGATTAGCCGATTAAAAAAAAAAAA]

[-] EMBL CA761096             [ACAAGGGGTGAAGCTAGAGCAAGATTGCACCAACGGTGAGCTGAATGAGCATGAGCTGACCAAAGGAGGAGCTGCTGCAATGGGAGGAGCTGTTTTGACCATGGCTCGTAGGCCTGATTCTATGGCCATTCTTGCTCTNATAGTTGCAGTTACCAT CGCGATAACTATCGTCGTGCGCCTATATGTTCCTCTGCAAGCAACATGATCTTCAGATGAACCCACGGTAAGTTCGCAAAACGCAACAGAGTTCTTCTCTGATCACTTCAAATTTTGAGCTGTATGTATGGAAAATCGACAGAGTTGAGTTGTATAAAGACGGGAAAAGGCCTACTAGTATGAGTTCTACTAGTTCATTTCCTAGCCTGAATGCCAGCTGTATGATGAAATAGCAAGGCCTGGTACCAAGAGGCAAAAGAAGATAAGAGGTTCAGATTAATAGTTTTTCTTCTAAGTGGTAGACTGCTAGTCTTTGTTTTCTGTAGGGTACGTCACTGCTTCAGTGCTGAAGAACATCACAAAGGTTGCGACAGGGCGACCAGCAATAAAACTATGTTGAAATTGTGATGAACAACATGGCAGTTTATCTTAATTGTTCTTCTCTTTTAAAAAAAAAA                                                                                    ]
[-] EMBL CA760720             [                   CAA ATGGCCCGACCGGGGAGTTGAATAACCATGACCTGACCAAGGGGGGAGTTGCTCCAATGGGAGGACCTGTTTTGACCATGGCTGGTAGGCCTTATTCTAGCGCCCTTCTTGCTCTAATAGGTGCAGTGCCCATGCCCGATAACAATGGTGGTATGCCTATATGTTCCTTCGCAGGCAACATGATCTTCAGATGACCCCACGGTAAGTTCGCAAAACGCAACAGAGTTGTTCTCTGATCACTTCAAATTTTGAGCTGTATGTATGGAAAATCGACAGAGTTGAGTTGTATAAAGACGGGAAAAGGCCTACTAGTATGAGTTCTACTAGTTCATTTCCTAGCCTGAATGCCAGCTGTATGATGAAATAGCAAGGTCTGGTACCAAGAGGCAAAAGAAGATAAGAGGTTCAGATTAATAGTTTTTTTTCTAAGTGGTAGACTGCTAGTCTTTGTTTTCTGTAGGGTACGTCACTGCTTCAGTGCTGAAGAACATCACAAAGGTTGCGACAGGGCAACCAGCAATAAAACTATGTTGAAATTGTGATGAACAACATGGCAGTTTATCTTAATTATTCTTCTCTTTTATCATTATATATCACCCTTGTTAGTAATCTGTAGTTTATCCTCTATTCTTGAAATGAATCAATAATCTAAGATTAGCCGATTAAAAAAAAAAAA]




>consensus_11076#2
ACAAGGGGTGAAGCTAGAGCAAGATTGCACCAACGGTGAGCTGAATGAGCATGAGCTGAC
CAAAGGAGGAGCTGCTGCAATGGGAGGAGCTGTTTTGACCATGGCTCGTAGGCCTGATTC
TATGGCCATTCTTGCTCTNATAGTTGCAGTTACCATCGCGATAACTATCGTCGTGCGCCT
ATATGTTCCTCTGCAAGCAACATGATCTTCAGATGAACCCACGGTAAGTTCGCAAAACGC
AACAGAGTTCTTCTCTGATCACTTCAAATTTTGAGCTGTATGTATGGAAAATCGACAGAG
TTGAGTTGTATAAAGACGGGAAAAGGCCTACTAGTATGAGTTCTACTAGTTCATTTCCTA
GCCTGAATGCCAGCTGTATGATGAAATAGCAAGGCCTGGTACCAAGAGGCAAAAGAAGAT
AAGAGGTTCAGATTAATAGTTTTTCTTCTAAGTGGTAGACTGCTAGTCTTTGTTTTCTGT
AGGGTACGTCACTGCTTCAGTGCTGAAGAACATCACAAAGGTTGCGACAGGGCGACCAGC
AATAAAACTATGTTGAAATTGTGATGAACAACATGGCAGTTTATCTTAATTGTTCTTCTC
TTTTAAAAAAAAAAATCACCCTTGTTAGTAATCTGTAGTTTATCCTCTATTCTTGAAATG
AATCAATAATCTAAGATTAGCCGATTAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11076#0      TCCTTCTCTCTCTCTCTCTCTCTAGAACGCGCGCAAGAACACGCGCGAGGACTCCCCCCA 60
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      AACCCCCACTTAATTGCGCGCGAATGGAGTAATACTAGTACTAGTATAATCATTAATTGG 120
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      TGTTTATGGGAAGTGGTGGTGGTGGTGGTGATCTTGGTGTGGCGCGAGAGGTGAGAGAGG 180
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      AGGAGAGAGGTGGCGGCGGCGGCGGGATGAGGAAGGCGCGCGTGTGCGTCCGCGCGCCGC 240
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      ACGGCGCCGGCGCGCTGCTCGTCGTCGGCGGCGCGGTCGTAGGCGCCGCCGTCTTCGCGT 300
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      GGTGCCGCCGCCGCTGCCGAAGTGACGGCGGCGAGGGCGAGGGCGAGCGCAAGGAGGGCG 360
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      CCAAGAACCACGGCGAGCATCCAGCAAAGGAGGAGGGTGGTTTGGATGGCGGAGTTGTCG 420
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      AGGGCGAGCAGGGGGACGCGCAGAGGCTTCATCAAATTTATCAGAATCTGAGCAGGGACA 480
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      ACGTCGAGGTTGGAGTCAATGGATCGGATGGCAAGGCAACAGATGAACTTTATCAGATTC 540
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      AGAAGGATGATGAGGTCGTTCCGAATGGTGATAAGATCGTTCTGTCTGAATTGGTTACTG 600
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      AAGCTGTGGAGAAATATGATCACGGTTCAATCAAGGACTGTGCGGAGATCGCCCCGGATG 660
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      GCATGGTTAATGAAGCTGTTGAGACATATAATCACAATTCAGAGAGGGACTGCGCTGAGA 720
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      TCACTGCACATGTTATGGACACAGAAAATGTGACAGAGGATGATGATAATTCAGGCAAAA 780
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      ATGATGCCGAGAATGAGATAATTGTAAATGAAAATGAAGGTGAAGAAAATTCTGCGGAAA 840
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      ACACTTTTAGCCTCAGCAGCCCTGACATCACCCTTGAGGAACATGACAACAACAACTGTG 900
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      TTGATCAAGATACTGCATCAACAGAGACAACACCAACTACAGAGAAGGTGATGCATCAAG 960
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      AACAAGTCTCAGAGCAGGTGAAGATGGCAGAAACAGCAGAAGTGAAACCGGCAGAAGAAA 1020
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      CAGAAACCACACCAATGGTTCAAACAGAAGTGAAACTGGAAGAGGAAACGGAGACCACAC 1080
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      CAGTTGCTGAAACAACAGAAGTGAAGCCGGCAGAAGAAACAGAGACCTCAACAGTGGCTG 1140
consensus_11076#1      --------------------------------------------------ACNN-GGGNG 9
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      AAACTTTACAGGTGAAACCAGCCGAAGAAACGGATACCACATCCATGGC-TGAAACAGCA 1199
consensus_11076#1      AAACTGGGCAGGNGNNACCGGCCAAANAAACAGAGATCACGGCCCTGGCGTGNCACAGCA 69
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      G-AACTGAAGCTGGCAGAAGAAACAGAGACTGCATCAATGGCTGAAACAGCAGAAGTGAA 1258
consensus_11076#1      GGAACTGATGCTGCCAGAANNANCACAGACTGGATCAATGGCTGAAACAGCAGAAGAGAA 129
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      ACTCGCAGAAGAAACAGAGACCATACCAATGGCAGAAACAGCAGAAGTGAAACTAGCAGA 1318
consensus_11076#1      NCNCGNAGANGAAACAGAGACCATTCCAANGNNCGAGNCAGCTNAAGTGNAACTGGCANA 189
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      AGAAAAAGTCATGAAGAAAAATGA-GTTTGA-ACATGAGGAAGAGAATTCTAAGGAAGAA 1376
consensus_11076#1      NGANAAAGCCAGCAAGAAAAATGACNTTTGATGCACGAGGAAGANAATTCTAAGGAAGAA 249
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      TATGTTAAACCGGTCAATTCAC-TGGCATATTCCTCAGTGCCATCTCTGCTTAAGCGAAC 1435
consensus_11076#1      TCTGTTAAGCCGNACANTTCACATGGCATACTNCTCAGTGCCATCTCTGCTTAAGCGAAC 309
consensus_11076#2      ------------------------------------------------------------
                                                                                   

consensus_11076#0      GGTGAAGAAAGGGCAGGTGAATCCTAGATGGAATGAGACAGGGATGAAGCTAGAGCAAGA 1495
consensus_11076#1      GGNGAAGAAAGGGCAGNTGAATCCTATATGGAATGAGACAGNCATGAANCTAGAGCAAGA 369
consensus_11076#2      ------------------------------------ACAAGGGGTGAAGCTAGAGCAAGA 24
                                                              **   **** ***********

consensus_11076#0      TTGCACCAACGGTGAGCTGAATGAGCATGACCTGACCAAAGCAGGAGCTACCGCAATGGG 1555
consensus_11076#1      TTGCACCAACGGTGANCTGAANGANCNTGAGCTGACCTAAGGANGAGCTGCTGCNATGGG 429
consensus_11076#2      TTGCACCAACGGTGAGCTGAATGAGCATGAGCTGACCAAAGGAGGAGCTGCTGCAATGGG 84
                       *************** ***** ** * *** ****** *** * ***** * ** *****

consensus_11076#0      AGGAGCTGTTTTGACCATGGCTCGTAGGCCTGATTCTATGGCCATTCTTGCTCTTATAGT 1615
consensus_11076#1      AGGAGCTGNTNNGACCATGGNTNGCNGNCCNGATNCTATGGCCATTCTTGCTCTNATAGG 489
consensus_11076#2      AGGAGCTGTTTTGACCATGGCTCGTAGGCCTGATTCTATGGCCATTCTTGCTCTNATAGT 144
                       ******** *  ******** * *  * ** *** ******************* **** 

consensus_11076#0      TGCAGTT-ACCATCGCGATAACTATCGTCGTGCGCCTATATGTTCCTCTGCAAGCAACAT 1674
consensus_11076#1      TGCAGTNTACCATCGCGATAACTATCGTCGTGCGCCTATATGTTCCTNTGCAAGCAACAT 549
consensus_11076#2      TGCAGTT-ACCATCGCGATAACTATCGTCGTGCGCCTATATGTTCCTCTGCAAGCAACAT 203
                       ******  *************************************** ************

consensus_11076#0      GATCTTTAGATGAACCCACGG-TAAGTTCGCAAAATGCAACGGAGTTCTTCTCTGATCAC 1733
consensus_11076#1      GATCTTCAGNTGAACCCACGGCTNAGGTCGCAAANCGCAACAGAGTTCTTCTCTGATCAC 609
consensus_11076#2      GATCTTCAGATGAACCCACGG-TAAGTTCGCAAAACGCAACAGAGTTCTTCTCTGATCAC 262
                       ****** ** *********** * ** *******  ***** ******************

consensus_11076#0      TTCAAATTCTGA-ACTGTATGTATGGAAAATCAACGGAGTCGAATTGTACAAGGGGGAAA 1792
consensus_11076#1      TTCAAATTCTGGCGCTGTCTGTATGGAAAATCGACAGAGTTGAGCTGTATAAAAGACGGG 669
consensus_11076#2      TTCAAATTTTGA-GCTGTATGTATGGAAAATCGACAGAGTTGAGTTGTATAAA-GACGGG 320
                       ******** **   **** ************* ** **** **  **** **  *     

consensus_11076#0      AAAGCCTCTACTAGTATGAGTTAATTATAACTCATTGGATAGCCTAAATGCCAGGTGTAA 1852
consensus_11076#1      AAAAGGCCTACTAGCATGAGNTC-TACTAGGTCATTTCCTAGCCTGAANGCCAGCTGCAT 728
consensus_11076#2      AAAAGGCCTACTAGTATGAGTTC-TACTAGTTCATTTCCTAGCCTGAATGCCAGCTGTAT 379
                       ***    ******* ***** *  *  **  *****   ****** ** ***** ** * 

consensus_11076#0      CCTGTAGTAGCAAGGCTTAGTATCAAGAGGCAAAAAGAAGATAGTATGTTCAGATCATAG 1912
consensus_11076#1      GATGAAATACCAAGNNCTGGTACCANGGAG-GCAAAANAGNTAAGAGCTTCAGANTNTAA 787
consensus_11076#2      GATGAAATAGCAAGGCCTGGTACCAAGAGG-CAAAAGAAGATAAGAGGTTCAGATTAATA 438
                         ** * ** ****   * *** ** *  *   ***  ** **  *  ******      

consensus_11076#0      AGTTT-CTCCTAAGAGGTAGACTGCTAGTCTTTCTTTTCTGTAGGGTATGTCACTGCTTC 1971
consensus_11076#1      GGTTTTCTTCTAANTGCTANACTGCTAGTCNTTGTNTTNTGCAAGGTTNCGTACTGC--- 844
consensus_11076#2      GTTTTTCTTCTAAGTGGTAGACTGCTAGTCTTTGTTTTCTGTAGGGTACGTCACTGCTTC 498
                         *** ** ****  * ** ********** ** * ** ** * ***     *****   

consensus_11076#0      AGTGCTGAAGTAT-CAAAAAAGGTTGCGACAGGGCAACCAGCAACAAAACTATGTTGAAA 2030
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      AGTGCTGAAGAACATCACAAAGGTTGCGACAGGGCGACCAGCAATAAAACTATGTTGAAA 558
                                                                                   

consensus_11076#0      TTGTGATGAACAACATG-CAGTTTATACGAATTATTCTTCTC------------------ 2071
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      TTGTGATGAACAACATGGCAGTTTATCTTAATTGTTCTTCTCTTTTAAAAAAAAAAATCA 618
                                                                                   

consensus_11076#0      ------------------------------------------------------------
consensus_11076#1      ------------------------------------------------------------
consensus_11076#2      CCCTTGTTAGTAATCTGTAGTTTATCCTCTATTCTTGAAATGAATCAATAATCTAAGATT 678
                                                                                   

consensus_11076#0      --------------------
consensus_11076#1      --------------------
consensus_11076#2      AGCCGATTAAAAAAAAAAAA 698


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)