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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11126#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2825 fasta sequence
[CCATTGCTCGCCGCGGCGAGAGCACGCGAGGTCACGAGGAGGAGAAGAAAAAGCGGAATCGAGAAGCTACCAAACGCGAGCGGAGATGGGGTTACCTACTGCTGCTGCGCCCGCGTGCTGCTTCCCCTCCACTTCGTCGTCGTCCCCGCGGCTACTGCTCCTCCCGCTCCAACCACCACCACCACAGCCGCCGCGGCGACGGCGGCGGCTTGTTTCCCCCGGGGTTTGCTTCGGTTCTCCGCTGCCGCTGCACGCCCGCTTCCACTGGCCCCACGCGGTGGCATCCTCCTCCATGCGCCGCCGCGGGCGGCGACGCAGGGCCACGGCCCCTCCCGCCGCGGCAGCCGCAGGGGAGGCCACCGGCGACGGCGGCGGCTCTGGTCCCGGCGCCGAGGATAAGAGAGTTGAAACGGACCTCAAAACACTTGCTAGAAGATTTTGGAAAGTTGCTGCCCCTTACTGGTGGTCAGAAGATAAAGTGCAAGCGAGGCTGAGGCTTGCTGCAGTATTTGCTCTTACATTAGCAACTACTGGAATTAGTGTTGGATTTAACTTTCTGGGTCGTGACTTCTACAATGCCCTTGCTGACAAGGACCAGGAACAATTTACCAAGCAACTGCTGTATTACTTGGGAGGTTTTGCTGTAGGAATACCGTTCTTTGTCTTGAGAGACTATGCAAGGGAGACCCTTTCTTTAAGATGGCGATCTTGGATGACAAGTTATTACATGAAGCGCTACTTTAAAAATAGAACTTTCTATAAGATTCAATCTCAATCACTAATTGATAACCCGGATCAACGGATCAATGATGATCTCAGTGCATTCACTGGAACCGCGCTTGCATTTTCTCTGACATTTTTAAATGCTGCCGTGGACTTGATATCATTCAGTAACATCCTTTATGGGATCTATCCACCATTATTCATTGTTCTTATTGTCTACTCCCTTGGGGGCACTGGAATTAGTATCTTCCTTGGTAAAAATTTGGTCAACTTGAACTTCATGCAAGAAAAGAAAGAAGCAGATTTTCGTTATGGACTTGTCCGAGTTAGAGAAAATGCTGAATCAATTGCTTTTTATGGCGGTGAAGAAAATGAATTGCAACTTTTGTTGGATCGATTCAGGAGGGCTTTTGAAAACCTTAGCGAATTGCTAATAGCATCTCGTAATCTGGAGTTTTTCACCAATGGCTACCGTTATTTAATCCAGATCCTGCCAGCTGCAGTTGTTGCTCCGATGTACTTCTCAGGAAAAATTGAATTTGGAGTAATAAATCAATCAGTGTCTGCTTTCAATCATATCCTTAGTGATTTTTCTCTCATTGTGTTCCAGTTTCAGTCAATTAGTGCATTCTCGGCGGTTATTGATCGTCTAGGTGAATTTGATGATCTGTTGGATGGAAATGGTTCATCTTTATCCAAGCCTGATAACATTGATGGGATCAACATAATTTTCAAGAGCACTGGTCCTACTGTACTGAGTTCCAATGGATCACCGACACAATCTAATCCATCCATGGTTCTTGAGATTTGTAATTTGACATTATTAACACCCAGGAGTGGAAACATTCTTATTACTGACCTCACTATGGAACTCAAAGAAAAGGACCACCTACTGGTAATGGGGCCCAGTGGAAGTGGGAAAACCTCTTTGTTACGTGCTTTGGCTGGCCTTTGGACCAGTGGTACTGGGGACATCATATACCATGTGAGAGGTTCCATGGAGCTTCAAACATCAAATTCAGGTCCTGATGAGCCATCCAACATACAGTCAAACGGTGAAGAACTGCTACAAAGTTCAAAGCAGAGAAGGGATAATGGTATATTCTTTGTTCCACAGAGACCATATATGGTTTTGGGAACCCTTCGTCAGCAATTGCTCTATCCTACATGGACTGAAGATGTTTGTCATTCATCAAATAATGATCCTCAAAGTACAGACCCTCTTACCTTTGAAGTCTCCACATCAGATGGAGTTGGTTCCAAGTCTGAGATGCCCACAACTGATGAACTGATCAGAGTACTTGAGGCTGTTAAGTTAGGCTATATATTGCCTCGTTTCAATGGTTTGGATTCTATGCATGATTGGGCCAGCGTTCTCTCTCTGGGGGAGCAACAGCGTCTTGCATTTGCTCGGTTGTTACTTGCAAAA-CCAACTTTAGTCCTCCTTGATGAGTCCACAAGTGCACTAGATGATATGAATGAGCGTCATCTATACAGTCAGATTGAAGCTGCAGGGATTACTTACATAAGCATTGGTCACCGGAAAACACTGCACAAGTTCCACAACAAGGTCTTGTACATTTCAAATTCCGATTCAACGGATAGCAACCCACGTAATTGGTACCTAAAGCCCACAGAACAGATGTCGATTGAAGAGTCATCCTCATTTGCTTCATAAGAATTTCATGATTTGAGCAACATTTGCCCCTGAGCAGTTTTGTCGCAAGATTTCACCCATACGTGAAGTGTATGGTGCCCAGCCAAGTACCCAAAATATGTCATGCTGATTGTTCTAAAGATGTGATGCTTGAGTAGTTGAGTTGTATGACCAAAATTGCTAGTATGCTACAAACCAACTCGAGGCGTGGCACAGATTTTAGCACCTAAAGGTTGAAAGGGAAGCTCATCTGTTCTTGGATCGTTATACCACGAAGTTCAGAATGAACATCATATGTAGATATGCAGTCCTCTGATCTTTTTGAGTTTCTTTTAGAAATGACGACGGAATATCTGAAACTGTCTCTTTGTTATTACGTGTGTGGTGTGTCCTTGTAACTATACTGGGAATTACAGCTCTTATATACATGCAGTGTGTGCAGACT]
[+] EMBL AK064992 [CCATTGCTCGCCGCGGCGAGAGCACGCGAGGTCACGAGGAGGAGAAGAAAAAGCGGAATCGAGAAGCTACCAAACGCGAGCGGAGATGGGGTTACCTACTGCTGCTGCGCCCGCGTGCTGCTTCCCCTCCACTTCGTCGTCGTCCCCGCGGCTACTGCTCCTCCCGCTCCAACCACCACCACCACAGCCGCCGCGGCGACGGCGGCGGCTTGTTTCCCCCGGGGTTTGCTTCGGTTCTCCGCTGCCGCTGCACGCCCGCTTCCACTGGCCCCACGCGGTGGCATCCTCCTCCATGCGCCGCCGCGGGCGGCGACGCAGGGCCACGGCCCCTCCCGCCGCGGCAGCCGCAGGGGAGGCCACCGGCGACGGCGGCGGCTCTGGTCCCGGCGCCGAGGATAAGAGAGTTGAAACGGACCTCAAAACACTTGCTAGAAGATTTTGGAAAGTTGCTGCCCCTTACTGGTGGTCAGAAGATAAAGTGCAAGCGAGGCTGAGGCTTGCTGCAGTATTTGCTCTTACATTAGCAACTACTGGAATTAGTGTTGGATTTAACTTTCTGGGTCGTGACTTCTACAATGCCCTTGCTGACAAGGACCAGGAACAATTTACCAAGCAACTGCTGTATTACTTGGGAGGTTTTGCTGTAGGAATACCGTTCTTTGTCTTGAGAGACTATGCAAGGGAGACCCTTTCTTTAAGATGGCGATCTTGGATGACAAGTTATTACATGAAGCGCTACTTTAAAAATAGAACTTTCTATAAGATTCAATCTCAATCACTAATTGATAACCCGGATCAACGGATCAATGATGATCTCAGTGCATTCACTGGAACCGCGCTTGCATTTTCTCTGACATTTTTAAATGCTGCCGTGGACTTGATATCATTCAGTAACATCCTTTATGGGATCTATCCACCATTATTCATTGTTCTTATTGTCTACTCCCTTGGGGGCACTGGAATTAGTATCTTCCTTGGTAAAAATTTGGTCAACTTGAACTTCATGCAAGAAAAGAAAGAAGCAGATTTTCGTTATGGACTTGTCCGAGTTAGAGAAAATGCTGAATCAATTGCTTTTTATGGCGGTGAAGAAAATGAATTGCAACTTTTGTTGGATCGATTCAGGAGGGCTTTTGAAAACCTTAGCGAATTGCTAATAGCATCTCGTAATCTGGAGTTTTTCACCAATGGCTACCGTTATTTAATCCAGATCCTGCCAGCTGCAGTTGTTGCTCCGATGTACTTCTCAGGAAAAATTGAATTTGGAGTAATAAATCAATCAGTGTCTGCTTTCAATCATATCCTTAGTGATTTTTCTCTCATTGTGTTCCAGTTTCAGTCAATTAGTGCATTCTCGGCGGTTATTGATCGTCTAGGTGAATTTGATGATCTGTTGGATGGAAATGGTTCATCTTTATCCAAGCCTGATAACATTGATGGGATCAACATAATTTTCAAGAGCACTGGTCCTACTGTACTGAGTTCCAATGGATCACCGACACAATCTAATCCATCCATGGTTCTTGAGATTTGTAATTTGACATTATTAACACCCAGGAGTGGAAACATTCTTATTACTGACCTCACTATGGAACTCAAAGAAAAGGACCACCTACTGGTAATGGGGCCCAGTGGAAGTGGGAAAACCTCTTTGTTACGTGCTTTGGCTGGCCTTTGGACCAGTGGTACTGGGGACATCATATACCATGTGAGAGGTTCCATGGAGCTTCAAACATCAAATTCAGGTCCTGATGAGCCATCCAACATACAGTCAAACGGTGAAGAACTGCTACAAAGTTCAAAGCAGAGAAGGGATAATGGTATATTCTTTGTTCCACAGAGACCATATATGGTTTTGGGAACCCTTCGTCAGCAATTGCTCTATCCTACATGGACTGAAGATGTTTGTCATTCATCAAATAATGATCCTCAAAGTACAGACCCTCTTACCTTTGAAGTCTCCACATCAGATGGAGTTGGTTCCAAGTCTGAGATGCCCACAACTGATGAACTGATCAGAGTACTTGAGGCTGTTAAGTTAGGCTATATATTGCCTCGTTTCAATGGTTTGGATTCTATGCATGATTGGGCCAGCGCTCTCTCTCTGGGGGAGCAACAGCGTCTTGCATTTGCTCGGTTGTTACTTGCAAAA CCAACTTTAGTCCTCCTTGATGAGTCCACAAGTGCACTAGATGATATGAATGAGCGTCATCTATACAGTCAGATTGAAGCTGCAGGGATTACTTACATAAGCATTGGTCACCGGAAAACACTGCACAAGTTCCACAACAAGGTCTTGTACATTTCAAATTCCGATTCAACGGATAGCAACCCACGTAATTGGTACCTAAAGCCCACAGAACAGATGTCGATTGAAGAGTCATCCTCATTTGCTTCATAAGAATTTCATGATTTGAGCAACATTTGCCCCTGAGCAGTTTTGTCGCAAGATTTCACCCATACGTGAAGTGTATGGTGCCCAGCCAAGTACCCAAAATATGTCATGCTGATTGTTCTAAAGATGTGATGCTTGAGTAGTTGAGTTGTATGACCAAAATTGCTAGTATGCTACAAACCAACTCGAGGCGTGGCACAGATTTTAGCACCTAAAGGTTGAAAGGGAAGCTCATCTGTTCTTGGATCGTTATACCACGAAGTTCAGAATGAACATCATATGTAGATATGCAGTCCTCTGATCTTTTTGAGTTTCTTTTAGAAATGACGACGGAATATCTGAAACTGTCTCTTTGTTATTACGTGTGTGGTGTGTCCTTGTAACTATACTGGGAATTACAGCTCTTATATACATGCAGTGTGTGCA ]
[+] EMBL CB619597 [ GAGAGCACTCGAGGTCACGAGGAGGAGAAGAAAAAGCGGAATCGAGAAGCTACCAAACGCGAGCGGAGATGGGGTTACCTACTGCTGCTGCGCCCGCGTGCTGCTTCCCCTCCACTTCGTCGTCGTCCCCGCGGCTACTGCTCCTCCCGCTCCAACCACCACCACCACAGCCGCCGCGGCGACGGCGGCGGCTTGTTTCCCCCGGGGTTTGCTTCGGTTCTCCGCTGCCGCTGCACGCCCGCTTCCACTGGCCCCACGCGGTGGCATCCTCCTCCATGCGCCGCCGCGGGCGGCGACGCAGGGCCACGGCCCCTCCCGCCGCGGCAGCCGCAGGGGAGGCCACCGGCGACGGCGGCGGCTCTGGTCCCGGCGCCGAGGATAAGAGAGTTGAAACGGACCTCAAAACACTTGCTAGAAGATTTTGGAAAGTTGCTGCCCCTTACTGGTGGTCAGAAGATAAAGTGCAAGCGAGGCTGAGGCTTGCTGCAGTATTTGCTCTTACATTAGCAACTACTGGAATTAGTGTTGGATTTAACTTTCTGGGTCGTGACTTCTACAATGCCCTTGCTGACAAGGACCAGGAACAATTTACCAAGCAACTGCTGTATTACTTGGGAGGTTTTGCTGTAGGAATACCGTTCTTTGTCTTGAGAGACTATGCAAGGGAGACCCTTTCTTTAAGATGGCGATCTTGGATGACAAGTTATTACATGAAGCGCTACTTTAAAAATAGAACTTTCTATAAGATTCAATCTCAATCACTAATTGATAACCCGGATCAACGGATCAATGATGATCTCAGTGCATTCACTGGAACCGCGCTTGCATTTTCTCTGACATTNTTTAATGCTGCCGTGGA ]
[+] EMBL AK063157 [ CATTCATCAAATAATGATCCTCAAAGTACAGACCCTCTTACCTTTGAAGTCTCCACATCAGATGGAGTTGGTTCCAAGTCTGAGATGCCCACAACTGATGAACTGATCAGAGTACTTGAGGCTGTTAAGTTAGGCTATATATTGCCTCGTTTCAATGGTTTGGATTCTATGCATGATTGGGCCAGCGTTCTCTCTCTGGGGGAGCAACAGCGTCTTGCATTTGCTCGGTTGTTACTTGCAAAA CCAACTTTAGTCCTCCTTGATGAGTCCACAAGTGCACTAGATGATATGAATGAGCGTCATCTATACAGTCAGATTGAGGCTGCAGGGATTACTTACATAAGCATTGGTCACCGGAAAACACTGCACAAGTTCCACAACAAGGTCTTGTACATTTCAAATTCCGATTCAACGGATAGCAACCCACGTAATTGGTACCTAAAGCCCACAGAACAGATGTCGATTGAAGAGTCATCCTCATTTGCTTCATAAGAATTTCATGATTTGAGCAACATTTGCCCCTGAGCAGTTTTGTCGCAAGATTTCACCCATACGTGAAGTGTATGGTGCCCAGCCAAGTACCCAAAATATGTCATGCTGATTGTTCTAAAGATGTGATGCTTGAGTAGTTGAGTTGTATGACCAAAATTGCTAGTATGCTACAAACCAACTCGAGGCGTGGCACAGATTTTAGCACCTAAAGGTTGAAAGGGAAGCTCATCTGTTCTTGGATCGTTATACCACGAAGTTCAGAATGAACATCATATGTAGATATGCAGTCCTCTGATCTTTTTGAGTTTCTTTTAGAAATGACGACGGAATATCTGAAACTGTCTCTTTGTTATTACGTGTGTGGTGTGTCCTTGTAACTATACTGGGAATTACAGCTCTTATATACATGCAGTGTGTGCA ]
[-] EMBL CB619598 [ ACTTGAGGCTGTTAAGTTAGGCTATATATGCCCTCGTTTCAATGGTTTGGATTCTATGCATGATTGGGCCAGCGTTCTCTCTCTGGGGGAGCAACAGCGTCTTGCATTTGCTCGGTTGTTACTTGCAAAA CCAACTTTAGTCCTCCTTGATGAGTCCACAAGTGCACTAGATGATATGAATGAGCGTCATCTATACAGTCAGATTGAAGCTGCAGGGATTACTTACATAAGCATTGGTCACCGGAAAACACTGCACAAGTTCCACAACAAGGTCTTGTACATTTCAAATTCCGATTCAACGGATAGCAACCCACGTAATTGGTACCTAAAGCCCACAGAACAGATGTCGATTGAAGAGTCATCCTCATTTGCTTCATAAGAATTTCATGATTTGAGCAACATTTGCCCCTGAGCAGTTTTGTCGCAAGATTTCACCCATACGTGAAGTGTATGGTGCCCAGCCAAGTACCCAAAATATGTCATGCTGATTGTTCTAAAGATGTGATGCTTGAGTAGTTGAGTTGTATGACCAAAATTGCTAGTATGCTACAAACCAACTCGAGGCGTGGCACAGATTTTAGCACCTAAAGGTTGAAAGGGAAGCTCATCTGTTCTTGGATCGTTATACCACGAAGTTCAGAATGAACATCATATGTAGATATGCAGTCCTCTGATCTTTTTGAGTTTCTTTTAGAAATGACGACGGAATATCTGAAACTGTCTCTTTGTTATTACGTGTGTGGTGTGTCCTTGTAACTATACTGGGAAAAAGAGCTCTTATATACATGCAGTGT TGCAGACT]
[-] EMBL CB635000 [ tgtTTACGGGCAAAACCCAACTTTAGTCCCCCTTGATGAGTCCACAAGTGCACTGGATGATATGAATGAGCGTCCTCTATACAGTCAGATTGAAGCTGCAGGGATTACTTACATAAGCATTGGTCACCGGAAAACACTGCACAAGTTCCACAACAAGGTCTTGTACATTTCAAATTCCGATTCAACGGATAGCAACCCACGTAATTGGTACCTAAAGCCCACAGAACAGATGTCGATTGAAGAGTCATCCTCATTTGCTTCATAAGAATTTCATGATTTGAGCAACATTTGCCCCTGAGCAGTTTTGTCGCAAGATTTCACCCATACGTGAAGTGTATGGTGCCCAGCCAAGTACCCAAAATATGTCATGCTGATTGTTCTAAAGATGTGATGCTTGAGTAGTTGAGTTGTATGACCAAAATTGCAAGTATGCTACAAACCAACTCGAGGCGTGGCACAGATTTTAGCACCTAAAGGTTGAAAGGGAAGCTCATCTGTTCTTGGATCGTTATACCACGAAGTTCAGAATGAACATCATATGTAGATATGCAGTCCTCTGATCTTTTTGAGTTTCTTTTAGAAATGACGACGGAATATCTGAAACTGTCTCTTTGTTATTACGTGTGTGGTGTGTCCTTAGAGGTATACTGGGAA ]
[+] EMBL CF196075 [ CGTAATTGGTACCTAAAGCCCACAGAACAGATGTCGATTGAAGAGTCATCCTCATTTGCTTCATAAGAATTTCATGATTTGAGCAACATTTGCCCCTGAGCAGTTTTGTCGCAAGATTTCACCCATACGTGAAGTGTATGGTGCCCAGCCAAGTACCCAAAATATGTCATGCTGATTGTTCTAAAGATGTGATGCTTGAGTAGTTGAGTTGTATGACCAAAATTGCTAGTATGCTACAAACCAACTCGAGGCGTGGCACAGATTTTAGCACCTAAAGGTTGAAAGGGAAGCTCATCTGTTCTTGGATCGTTATACCACGAAGTTCAGAATGAACATCATATGTAGATATGCAGTCCTCTGATCTTTTTGAGTTTCTTTTAGAAATGACGACGGAATATCTGAAACTGTCTCTTTGTTATTACGTGTGTGGTGTGNNNTTGTAACTAnnnn ]
consensusID : consensus_11126#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 656 fasta sequence
[GGCCGGGTGGGTGCCGGCCCCCCCCCCGGGTCCCCGGGCTCACTACCCTGTTCAGGTACGCCGAGGCGAGCCGAGGCGGACCATCGCGTCTCGCATTTGTTCGGTGGTCCCTCGAAACCCACCTTTAGTCCTCCGTGATGGGTCCCCAAGTGCCCTAGGTGATATGAATGAGCGTCATCTATCCGGTCAGATCCAAGCTGCAGGGATTACTCCCATAACCATTGGTCCCCGGAAAACACTGCACAAGTTCCCCACCAAGGTGTTGTACATTTCAAATTCCGCTTCACCGGATACCAACCCACGTAATTGGTCCCTAAAGCCCCCAGACCAGATGTCGATTGAAGAGTCATCCTCATTTGCTTCATAAGAATTTCATGATTTGAGCACCATTTGCCCCTGAGCCGTTTTGTCGCAAGATTTCCCCCCTACGTGAAGTGTATGGTGCCCAGCCAAGTACCCAAAATATGTCATGCTGATTGTTCTAAAGATGTGATGCTTGAGTAGTTGAGTTGTATGCCCAAAAATGCTAGTTTGCTCCAAACCAACTCGAGGCGTGGCCCAGATTTTAGCCCCTAAAGGTTGAAAGGGAAGCTCATCTGTTCTTGGATCGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAA]
[-] EMBL CA762899 [GGCCGGGTGGGTGCCGGCCCCCCCCCCGGGTCCCCGGGCTCACTACCCTGTTCAGGTACGCCGAGGCGAGCCGAGGCGGACCATCGCGTCTCGCATTTGTTCGGTGGTCCCTCGAAACCCACCTTTAGTCCTCCGTGATGGGTCCCCAAGTGCCCTAGGTGATATGAATGAGCGTCATCTATCCGGTCAGATCCAAGCTGCAGGGATTACTCCCATAACCATTGGTCCCCGGAAAACACTGCACAAGTTCCCCACCAAGGTGTTGTACATTTCAAATTCCGCTTCACCGGATACCAACCCACGTAATTGGTCCCTAAAGCCCCCAGACCAGATGTCGATTGAAGAGTCATCCTCATTTGCTTCATAAGAATTTCATGATTTGAGCACCATTTGCCCCTGAGCCGTTTTGTCGCAAGATTTCCCCCCTACGTGAAGTGTATGGTGCCCAGCCAAGTACCCAAAATATGTCATGCTGATTGTTCTAAAGATGTGATGCTTGAGTAGTTGAGTTGTATGCCCAAAAATGCTAGTTTGCTCCAAACCAACTCGAGGCGTGGCCCAGATTTTAGCCCCTAAAGGTTGAAAGGGAAGCTCATCTGTTCTTGGATCGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAA]
consensusID : consensus_11126#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 607 fasta sequence
[GCTATCCCTTTAAGGAAAGTTGCTGCCCCTTACTGGTGGTCAGAACATAAAGTGCAAGCGAGGCTGAGGCTTGCTGCCGCCTTTGCTCTTACATTAGCAACTACTGGAATTAGTGTTGGATTTAACTTTCTGGGTCGTGACTTCTACAATGCCCTTGCTGTGTTTTCTCTTGCAAGACAAGGACCAGGAACAATTTACCAAGCAACTGCTGTATTACTTGGGAGGTTTTGCTGTAAGAATACCGGTGAGCATATTGCTGCTCTTTTGTAGTTCTTTGTCTTGAGAGACTATGCAAGGGAGACCCTTTCTTTAATATGGCGATCTTGGATGACAAGTTATTACATGAAGCGCTACTTTAAAAATACAACTTTCTATAATATTCAATCTCAATCACTAATTGATAACCCGGATCAACGGATCAATGATGATCTCAGTGCATTCACTGGAACCGCGCTTGCATTTTCTCTGACATTTTTAAATGCTGCCGTGGACTTGATATCATTCACTAACATCCTTTATGGGATCTATCCACCATTATTCATTGTTCTTATTGTCTACTCCCTTGGGGGCACTGGAATTAGTATCTTCCTTGGTAAAAATTTGGTCA]
[+] EMBL CB634999 [GCTATCCCTTTAAGGAAAGTTGCTGCCCCTTACTGGTGGTCAGAACATAAAGTGCAAGCGAGGCTGAGGCTTGCTGCCGCCTTTGCTCTTACATTAGCAACTACTGGAATTAGTGTTGGATTTAACTTTCTGGGTCGTGACTTCTACAATGCCCTTGCTGTGTTTTCTCTTGCAAGACAAGGACCAGGAACAATTTACCAAGCAACTGCTGTATTACTTGGGAGGTTTTGCTGTAAGAATACCGGTGAGCATATTGCTGCTCTTTTGTAGTTCTTTGTCTTGAGAGACTATGCAAGGGAGACCCTTTCTTTAATATGGCGATCTTGGATGACAAGTTATTACATGAAGCGCTACTTTAAAAATACAACTTTCTATAATATTCAATCTCAATCACTAATTGATAACCCGGATCAACGGATCAATGATGATCTCAGTGCATTCACTGGAACCGCGCTTGCATTTTCTCTGACATTTTTAAATGCTGCCGTGGACTTGATATCATTCACTAACATCCTTTATGGGATCTATCCACCATTATTCATTGTTCTTATTGTCTACTCCCTTGGGGGCACTGGAATTAGTATCTTCCTTGGTAAAAATTTGGTCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11126#0 CCATTGCTCGCCGCGGCGAGAGCACGCGAGGTCACGAGGAGGAGAAGAAAAAGCGGAATC 60
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 GAGAAGCTACCAAACGCGAGCGGAGATGGGGTTACCTACTGCTGCTGCGCCCGCGTGCTG 120
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 CTTCCCCTCCACTTCGTCGTCGTCCCCGCGGCTACTGCTCCTCCCGCTCCAACCACCACC 180
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 ACCACAGCCGCCGCGGCGACGGCGGCGGCTTGTTTCCCCCGGGGTTTGCTTCGGTTCTCC 240
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 GCTGCCGCTGCACGCCCGCTTCCACTGGCCCCACGCGGTGGCATCCTCCTCCATGCGCCG 300
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 CCGCGGGCGGCGACGCAGGGCCACGGCCCCTCCCGCCGCGGCAGCCGCAGGGGAGGCCAC 360
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 CGGCGACGGCGGCGGCTCTGGTCCCGGCGCCGAGGATAAGAGAGTTGAAACGGACCTCAA 420
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 -------------------------------------------------------GGCCG 5
consensus_11126#0 AACACTTGCTAGAAGATTTTGGAAAGTTGCTGCCCCTTACTGGTGGTCAGAAGATAAAGT 480
consensus_11126#2 -------GCTATCCCTTTAAGGAAAGTTGCTGCCCCTTACTGGTGGTCAGAACATAAAGT 53
consensus_11126#1 GGTGGGTGCCGGCCCCCCCCCCGGGTCCCCGGGCTCACTACCCTGTTCAGGT----ACGC 61
** * * * * ** **** * *
consensus_11126#0 GCAAGCGAGGCTGAGGCTTGCTGCAGTATTTGCTCTTACATTAGCAACTACT-GGAATTA 539
consensus_11126#2 GCAAGCGAGGCTGAGGCTTGCTGCCGCCTTTGCTCTTACATTAGCAACTACT-GGAATTA 112
consensus_11126#1 CGAGGCGAG-CCGAGGCGGACCATCGCGTCTCGCATTTGTTCGGTGGTCCCTCGAAACCC 120
* ***** * ***** * * * * ** * * ** * **
consensus_11126#0 GTGTTGGATTTAACTTTCTGGGTCGTGACTTCTACAA--TGCCCTTGCTG---------- 587
consensus_11126#2 GTGTTGGATTTAACTTTCTGGGTCGTGACTTCTACAA--TGCCCTTGCTGTGTTTTCTCT 170
consensus_11126#1 ACCTTTAGTCCTCCGTGATGGGTCCCCAAGTGCCCTAGGTGATATGAATGAGCGTCATCT 180
** * * * ****** * * * * ** * **
consensus_11126#0 ------ACAAGGACCAGGAACA---ATTTACCAAGCAACTGCTGTATTACTTGGGAGGTT 638
consensus_11126#2 TGCAAGACAAGGACCAGGAACA---ATTTACCAAGCAACTGCTGTATTACTTGGGAGGTT 227
consensus_11126#1 ATCCGGTCAGATCCAAGCTGCAGGGATTACTCCCATAACCATTGG--TCCCCGGAAAACA 238
** * ** ** *** * *** ** * * ** *
consensus_11126#0 TTGCTGTAGGAATACCG--------------------------TTCTTTGTCTTGAGAGA 672
consensus_11126#2 TTGCTGTAAGAATACCGGTGAGCATATTGCTGCTCTTTTGTAGTTCTTTGTCTTGAGAGA 287
consensus_11126#1 CTGC-ACAAGTTCCCCACCAAGG----TGTTGTACATTTCAAATTCCGCTTCACCGGATA 293
*** * * ** *** ** ** *
consensus_11126#0 CTATGCAAGGGAGACCCTTTCTTTAAGAT---GGC--GATCTTGGATGACAAGTTATTAC 727
consensus_11126#2 CTATGCAAGGGAGACCCTTTCTTTAATAT---GGC--GATCTTGGATGACAAGTTATTAC 342
consensus_11126#1 CCAACCCACGTAATTGGTCCCTAAAGCCCCCAGACCAGATGTCGATTGAAGAGTCAT--C 351
* * * * * * * ** * * * *** * * *** *** ** *
consensus_11126#0 ATGAAGCGCTACTTTAAAAATAGA-ACTTTCTATAAGATTCAATCTCAATCACTAATTGA 786
consensus_11126#2 ATGAAGCGCTACTTTAAAAATACA-ACTTTCTATAATATTCAATCTCAATCACTAATTGA 401
consensus_11126#1 CTCATTTGCTTCATAAGAATTTCATGATTTGAGCACCATTTGCCCCTGA--GCCGTTTTG 409
* * *** * * * ** * * *** * *** * * * **
consensus_11126#0 TAACCCGGATCAACGGATCAATGATGATCTCAGTGCATTCACTGGAACCGCGCTTGCATT 846
consensus_11126#2 TAACCCGGATCAACGGATCAATGATGATCTCAGTGCATTCACTGGAACCGCGCTTGCATT 461
consensus_11126#1 TCGCAAGATTTCCCCCCTACGTGAAGTGTATGGTGCCCAGCCAAGTACCCAAAATATGTC 469
* * * * * * *** * **** * * *** * *
consensus_11126#0 TTCTCTGACATTTTTAAA----TGCTGCC-GTGGACTTGATAT-CATTCAGTAACATCCT 900
consensus_11126#2 TTCTCTGACATTTTTAAA----TGCTGCC-GTGGACTTGATAT-CATTCACTAACATCCT 515
consensus_11126#1 ATG-CTGATTGTTCTAAAGATGTGATGCTTGAGTAGTTGAGTTGTATGCCCAAAAATGCT 528
* **** ** **** ** *** * * * **** * ** * ** ** **
consensus_11126#0 TTATGGGATCTATCCACCATTATTCATTGTTCTTATTGTCTACTCCCTTGGGGGCACTGG 960
consensus_11126#2 TTATGGGATCTATCCACCATTATTCATTGTTCTTATTGTCTACTCCCTTGGGGGCACTGG 575
consensus_11126#1 AGTTTGCTCCAAACCAACTCGAGGCGTGGCCCAGATTTTAGCCCCTAAAGGTTGAAAGGG 588
* * * * *** * * * * * * *** * * * ** * * **
consensus_11126#0 AA-TTAGTATCTTCCTTGGT----AAAAATTTGGTCAACTTGAACTTCATGCAAGAAAAG 1015
consensus_11126#2 AA-TTAGTATCTTCCTTGGT----AAAAATTTGGTCA----------------------- 607
consensus_11126#1 AAGCTCATCTGTTCTTGGATCGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAA 648
** * * * *** * * * ***** *
consensus_11126#0 AAAGAAGCAGATTTTCGTTATGGACTTGTCCGAGTTAGAGAAAATGCTGAATCAATTGCT 1075
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 AAAAAAAA---------------------------------------------------- 656
consensus_11126#0 TTTTATGGCGGTGAAGAAAATGAATTGCAACTTTTGTTGGATCGATTCAGGAGGGCTTTT 1135
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 GAAAACCTTAGCGAATTGCTAATAGCATCTCGTAATCTGGAGTTTTTCACCAATGGCTAC 1195
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 CGTTATTTAATCCAGATCCTGCCAGCTGCAGTTGTTGCTCCGATGTACTTCTCAGGAAAA 1255
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 ATTGAATTTGGAGTAATAAATCAATCAGTGTCTGCTTTCAATCATATCCTTAGTGATTTT 1315
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 TCTCTCATTGTGTTCCAGTTTCAGTCAATTAGTGCATTCTCGGCGGTTATTGATCGTCTA 1375
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 GGTGAATTTGATGATCTGTTGGATGGAAATGGTTCATCTTTATCCAAGCCTGATAACATT 1435
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 GATGGGATCAACATAATTTTCAAGAGCACTGGTCCTACTGTACTGAGTTCCAATGGATCA 1495
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 CCGACACAATCTAATCCATCCATGGTTCTTGAGATTTGTAATTTGACATTATTAACACCC 1555
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 AGGAGTGGAAACATTCTTATTACTGACCTCACTATGGAACTCAAAGAAAAGGACCACCTA 1615
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 CTGGTAATGGGGCCCAGTGGAAGTGGGAAAACCTCTTTGTTACGTGCTTTGGCTGGCCTT 1675
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 TGGACCAGTGGTACTGGGGACATCATATACCATGTGAGAGGTTCCATGGAGCTTCAAACA 1735
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 TCAAATTCAGGTCCTGATGAGCCATCCAACATACAGTCAAACGGTGAAGAACTGCTACAA 1795
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 AGTTCAAAGCAGAGAAGGGATAATGGTATATTCTTTGTTCCACAGAGACCATATATGGTT 1855
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 TTGGGAACCCTTCGTCAGCAATTGCTCTATCCTACATGGACTGAAGATGTTTGTCATTCA 1915
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 TCAAATAATGATCCTCAAAGTACAGACCCTCTTACCTTTGAAGTCTCCACATCAGATGGA 1975
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 GTTGGTTCCAAGTCTGAGATGCCCACAACTGATGAACTGATCAGAGTACTTGAGGCTGTT 2035
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 AAGTTAGGCTATATATTGCCTCGTTTCAATGGTTTGGATTCTATGCATGATTGGGCCAGC 2095
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 GTTCTCTCTCTGGGGGAGCAACAGCGTCTTGCATTTGCTCGGTTGTTACTTGCAAAACCA 2155
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 ACTTTAGTCCTCCTTGATGAGTCCACAAGTGCACTAGATGATATGAATGAGCGTCATCTA 2215
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 TACAGTCAGATTGAAGCTGCAGGGATTACTTACATAAGCATTGGTCACCGGAAAACACTG 2275
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 CACAAGTTCCACAACAAGGTCTTGTACATTTCAAATTCCGATTCAACGGATAGCAACCCA 2335
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 CGTAATTGGTACCTAAAGCCCACAGAACAGATGTCGATTGAAGAGTCATCCTCATTTGCT 2395
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 TCATAAGAATTTCATGATTTGAGCAACATTTGCCCCTGAGCAGTTTTGTCGCAAGATTTC 2455
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 ACCCATACGTGAAGTGTATGGTGCCCAGCCAAGTACCCAAAATATGTCATGCTGATTGTT 2515
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 CTAAAGATGTGATGCTTGAGTAGTTGAGTTGTATGACCAAAATTGCTAGTATGCTACAAA 2575
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 CCAACTCGAGGCGTGGCACAGATTTTAGCACCTAAAGGTTGAAAGGGAAGCTCATCTGTT 2635
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 CTTGGATCGTTATACCACGAAGTTCAGAATGAACATCATATGTAGATATGCAGTCCTCTG 2695
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 ATCTTTTTGAGTTTCTTTTAGAAATGACGACGGAATATCTGAAACTGTCTCTTTGTTATT 2755
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 ACGTGTGTGGTGTGTCCTTGTAACTATACTGGGAATTACAGCTCTTATATACATGCAGTG 2815
consensus_11126#2 ------------------------------------------------------------
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 TGTGCAGACT 2825
consensus_11126#2 ----------
consensus_11126#1 ----------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||