cluster # 11127

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Oryza sativa
cluster # 11127 cluster # 11127 Sequences # 8 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11127#0 length = 1286 sequences # 6

consensus_11127#1 length = 357 sequences # 1
consensus_11127#2 length = 326 sequences # 1

consensusID : consensus_11127#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1286
fasta sequence

                              [CATTCGAATCTCTCCGCCTCGTCGCCGTTGCGGCCGCTCCTCCCCTCCCCTCTCTCTCTTGTTCCCCCATGGCGATCGCCACCGAGTCGCGCTGCGAGGAGGAGAAGGCTTCGCCGCATTCGCAGGAGGTGAAGCGGTGGGTGTTGTCTGATTTTGACATCGGGAAGCCCCTCGGGAGGGGCAAGTTCGGCCATGTTTACTTAGCAAGAGAAAAGAGAAGTAACCATATTGTGGCTTTGAAAGTACTTTTCAAGAGCCAACTAAAGCAGTCCCAGGTGGAGCATCAGCTACGTCGGGAAGTTGAGATTCAGAGTCATCTTCGTCATCCCAACATTCTACGGCTGTATGGGTATTTCTATGATCAGACCCGTGTGTACTTGATCTTGGAGTATGCCTTAAAAGGTGAACTTTATAAGGAGTTGCAGAGGTGCAAGCATTTCTCTGAAAGACGTTCAGCGACTTACATTGCATCACTGGCGCATGCGCTCATCTACCTTCACGGAAAGCATGTGATCCATAGAGACATTAAACCTGAAAATCTTTTAATTGGGTCCCAGGGCGAACTGAAAATTGCAGACTTTGGTTGGTCTGTGCACACCTTCAACAGAAGAAGGACAATGTGTGGAACATTAGATTACCTGCCCCCTGAAATGGTGGAGAAGACTGAACATGACTACCATGTTGACATTTGGAGCTTGGGGATCCTGTGCTATGAGTTCCTTTATGGAGTCCCACCTTTCGAAGCAAAAGAACACTCCGAAACATATCGCAGGATTGTGAAAGTTGACTTGAAGTTCCCACTGAAACCATTCGTGTCCCCGGCTGCGAAAGACCTAATTTCACAGATGCTCGTGAAGAATTCGGCGCATCGTCTGCCCCTCCACAAGCTCCTCGAGCACCCTTGGATAGTTCAAAACGCTGATCCCTCCGGCGTGTACAGAGGCTAGAACAATCTCTTCCACTCTCCTCAATTCGAGGAGAGACCTGATTCTTTTTCATCACTGTTGTTATGGCAAAACAAGAAAAAAGCAGTAGCCGTACTACTCTACCTGTTGTTTCCGATCCCAGCTGCGCCTGTGTAGTTACGTGACAACGTGTATGCTCAAGCTTCAGATTTCCTCGATGAAGATTTGAAGCTGTGTGTGTGGGTTTAACGCGTATGTGTTTTAGCGTGTGTTCACAGCATGGGGTTGTGATATGTTTTCTGTGCAACGCCCTGTACTTAATGTACTAATCGTATTTCTTATTGGACATCACTCGATTAGTCTACAAGATAAAAAAAAAAA]

[+] EMBL AK102360             [CATTCGAATCTCTCCGCCTCGTCGCCGTTGCGGCCGCTCCTCCCCTCCCCTCTCTCTCTTGTTCCCCCATGGCGATCGCCACCGAGTCGCGCTGCGAGGAGGAGAAGGCTTCGCCGCATTCGCAGGAGGTGAAGCGGTGGGTGTTGTCTGATTTTGACATCGGGAAGCCCCTCGGGAGGGGCAAGTTCGGCCATGTTTACTTAGCAAGAGAAAAGAGAAGTAACCATATTGTGGCTTTGAAAGTACTTTTCAAGAGCCAACTAAAGCAGTCCCAGGTGGAGCATCAGCTACGTCGGGAAGTTGAGATTCAGAGTCATCTTCGTCATCCCAACATTCTACGGCTGTATGGGTATTTCTATGATCAGACCCGTGTGTACTTGATCTTGGAGTATGCCTTAAAAGGTGAACTTTATAAGGAGTTGCAGAGGTGCAAGCATTTCTCTGAAAGACGTTCAGCGACTTACATTGCATCACTGGCGCATGCGCTCATCTACCTTCACGGAAAGCATGTGATCCATAGAGACATTAAACCTGAAAATCTTTTAATTGGGTCCCAGGGCGAACTGAAAATTGCAGACTTTGGTTGGTCTGTGCACACCTTCAACAGAAGAAGGACAATGTGTGGAACATTAGATTACCTGCCCCCTGAAATGGTGGAGAAGACTGAACATGACTACCATGTTGACATTTGGAGCTTGGGGATCCTGTGCTATGAGTTCCTTTATGGAGTCCCACCTTTCGAAGCAAAAGAACACTCCGAAACATATCGCAGGATTGTGAAAGTTGACTTGAAGTTCCCACTGAAACCATTCGTGTCCCCGGCTGCGAAAGACCTAATTTCACAGATGCTCGTGAAGAATTCGGCGCATCGTCTGCCCCTCCACAAGCTCCTCGAGCACCCTTGGATAGTTCAAAACGCTGATCCCTCCGGCGTGTACAGAGGCTAGAACAATCTCTTCCACTCTCCTCAATTCGAGGAGAGACCTGATTCTTTTTCATCACTGTTGTTATGGCAAAACAAGAAAAAAGCAGTAGCCGTACTACTCTACCTGTTGTTTCCGATCCCAGCTGCGCCTGTGTAGTTACGTGACAACGTGTATGCTCAAGCTTCAGATTTCCTCGATGAAGATTTGAAGCTGTGTGTGTGGGTTTAACGCGTATGTGTTTTAGCGTGTGTTCACAGCATGGGGTTGTGATATGTTTTCTGTGCAACGCCCTGTACTTAATGTACTAATCGTATTTCTTATTGGACATCACT                            ]
[+] EMBL CF331152             [CATTCGAATCTCTCCGCCTCTTCGCCGTTGCGGCCGCTCCTCCCCTCCCCTCTCTCTCTTGTTCCCCCATGGCGATCGCCACCGAGTCGCGCTGCGAGGAGGAGAAGGCTTCGCCGCATTCGCAGGAGGTGAAGCGGTGGGTGTTGTCTGATTTTGACATCGGGAAGCCCCTCGGGAGGGGCAAGTTCGGCCATGTTTACTTAGCAAGAGAAAAGAGAAGTAACCATATTGTGGCTTTGAAAGTACTTTTCAAGAGCCAACTAAAGCAGTCCCAGGTGGAGCATCAGCTACGTCGGGAAGTTGAGATTCAGAGTCATCTTCGTCATCCCAACATTCTACGGCTGTATGGGTATTTCTATGATCAGACCCGTGTGTACTTGATCTTGGAGTATGCCTTAAAAGGTGAACTTTATAAGGAGTTGCAGAGGTGCAAGCATTTCTCTGAAAGACGTTCAGCGACTTACATTGCATCACTGGCGCATGCGCTCATCTACCTTCACGGAAAGCATGTGATCCATAGAGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL C22393               [                             GCGGCCGCTCCTCCCCTCCCCTCTCTCTCTTGTTCCCCCATGGCGATCGCCACCGAGTCGCGCTGCGAGGAGGAGAAGGCTTCGCCGCATTCGCAGGAGGTGAAGCGGTGGGTGTTGTCTGATTTTGACATCGGGAAGCCCCTCGGGAGGGGCAAGTTCGGCCATGTTTACTTAGCAAGAGAAAAGAGAAGTAACCATATTGTGGCTTTGAAAGTACTTTTCAAGAGCCAACTAAAGCAGTCCCAGGTGGAGCATCAGCTACGTCGGGAAGTTGAGATTCAGAGTCATCTTCGTCATCCCAACATTCTACGGCTGTATGGGTATTTCTATGATCAGACCCGTGTGTACTTGATCTTGGAGTATGCCTTAAAAGGTGAACTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK061360             [                                      CCTCCCCTCCCCTCTCTCTCTTGTTCCCCCATGGCGATCGCCACCGAGTCGCGCTGCGAGGAGGAGAAGGCTTCGCCGCATTCGCAGGAGGTGAAGCGGTGGGTGTTGTCTGATTTTGACATCGGGAAGCCCCTCGGGAGGGGCAAGTTCGGCCATGTTTACTTAGCAAGAGAAAAGAGAAGTAACCATATTGTGGCTTTGAAAGTACTTTTCAAGAGCCAACTAAAGCAGTCCCAGGTGGAGCATCAGCTACGTCGGGAAGTTGAGATTCAGAGTCATCTTCGTCATCCCAACATTCTACGGCTGTATGGGTATTTCTATGATCAGACCCGTGTGTACTTGATCTTGGAGTATGCCTTAAAAGGTGAACTTTATAAGGAGTTGCAGAGGTGCAAGCATTTCTCTGAAAGACGTTCAGCGACTTACATTGCATCACTGGCGCATGCGCTCATCTACCTTCACGGAAAGCATGTGATCCATAGAGACATTAAACCTGAAAATCTTTTAATTGGGTCCCAGGGCGAACTGAAAATTGCAGACTTTGGTTGGTCTGTGCACACCTTCAACAGAAGAAGGACAATGTGTGGAACATTAGATTACCTGCCCCCTGAAATGGTGGAGAAGACTGAACATGACTACCATGTTGACATTTGGAGCTTGGGGATCCTGTGCTATGAGTTCCTTTATGGAGTCCCACCTTTCGAAGCAAAAGAACACTCCGAAACATATCGCAGGATTGTGAAAGTTGACTTGAAGTTCCCACTGAAACCATTCGTGTCCCCGGCTGCGAAAGACCTAATTTCACAGATGCTCGTGAAGAATTCGGCGCATCGTCTGCCCCTCCACAAGCTCCTCGAGCACCCTTGGATAGTTCAAAACGCTGATCCCTCCGGCGTGTACAGAGGCTAGAACAATCTCTTCCACTCTCCTCAATTCGAGGAGAGACCTGATTCTTTTTCATCACTGTTGTTATGGCAAAACAAGAAAAAAGCAGTAGCCGTACTACTCTACCTGTTGTTTCCGATCCCAGCTGCGCCTGTGTAGTTACGTGACAACGTGTATGCTCAAGCTTCAGATTTCCTCGATGAAGATTTGAAGCTGTGTGTGTGGGTTTAACGCGTATGTGTTTTAGCGTGTGTTCACAGCATGGGGTTGTGATATGTTTTCTGTGCAACGCCCTGTACTTAATGTACTAATCGTATTTCTTATTGGACATCACT                            ]
[+] EMBL AU031061             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGACTTTGGTTGGTCTGTGCACACCTTCAACAGAAGAAGGACAATGTGTGGAACATTAGNTTACCTGCCCCCTGAAATGGTGGAGAAGACTGAACATGACTACCATGTTGACATTTGGAGCTTGGGGATCCTGTGCTATGAGTTCCTTTATGGAGTCCCACCTTTCGAAGCAAAAGAACACNCCGAAACATATCGCAGGATTGTGAAAGTTGACTTGAAGTTCCCACTGAAACCATTCGTGTCCCCGGCTGCGAAAGACCTAATTTCACAGATGCTCGTGAAGAATTCGGCGCATCGTCTGCCCCTCCACAAGCTCCTCGAGCACCCTTGGATAGTTCAAAANGCTGATCCCTCCGGCGTGTACA                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL C22394               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCTGCGAAAGNCCTAATTTCACAGATGCTCGTGAAGAATTCGGCGCATCGTCTGCCCCTCCACAAGCTCCTCGAGCACCCTTGGATAGTTCAAAACGCTGATCCCTCCGGCGTGTACAGAGGCTAGAACAATCTCTTCCACTCTCCTCAATTCGAGGAGAGACCTGATTCTTTTTCATCACTGTTGTTATGGCAAAACAAGAAAAAAGCAGTAGCCGTACTACTCTACCTGTTGTTTCCGATCCCAG TGCGCCTGTGTAGTTACGTGACAACGTGTATGCTCAAGCTTCAGATTTCCTCGATGAAGATTTGAAGCTGTGTGTGTGGGTTTAACGCGTATGTGTTTTAGCGTGTGTTCACAGCATGGGGTTGTGATATGTTTTCTGTGCAACGCCCTGTACTTAATGTACTAATCGTATTTCTTATTGGACATCACTCGATTAGTCTACAAGATAAAAAAAAAAA]




>consensus_11127#0
CATTCGAATCTCTCCGCCTCGTCGCCGTTGCGGCCGCTCCTCCCCTCCCCTCTCTCTCTT
GTTCCCCCATGGCGATCGCCACCGAGTCGCGCTGCGAGGAGGAGAAGGCTTCGCCGCATT
CGCAGGAGGTGAAGCGGTGGGTGTTGTCTGATTTTGACATCGGGAAGCCCCTCGGGAGGG
GCAAGTTCGGCCATGTTTACTTAGCAAGAGAAAAGAGAAGTAACCATATTGTGGCTTTGA
AAGTACTTTTCAAGAGCCAACTAAAGCAGTCCCAGGTGGAGCATCAGCTACGTCGGGAAG
TTGAGATTCAGAGTCATCTTCGTCATCCCAACATTCTACGGCTGTATGGGTATTTCTATG
ATCAGACCCGTGTGTACTTGATCTTGGAGTATGCCTTAAAAGGTGAACTTTATAAGGAGT
TGCAGAGGTGCAAGCATTTCTCTGAAAGACGTTCAGCGACTTACATTGCATCACTGGCGC
ATGCGCTCATCTACCTTCACGGAAAGCATGTGATCCATAGAGACATTAAACCTGAAAATC
TTTTAATTGGGTCCCAGGGCGAACTGAAAATTGCAGACTTTGGTTGGTCTGTGCACACCT
TCAACAGAAGAAGGACAATGTGTGGAACATTAGATTACCTGCCCCCTGAAATGGTGGAGA
AGACTGAACATGACTACCATGTTGACATTTGGAGCTTGGGGATCCTGTGCTATGAGTTCC
TTTATGGAGTCCCACCTTTCGAAGCAAAAGAACACTCCGAAACATATCGCAGGATTGTGA
AAGTTGACTTGAAGTTCCCACTGAAACCATTCGTGTCCCCGGCTGCGAAAGACCTAATTT
CACAGATGCTCGTGAAGAATTCGGCGCATCGTCTGCCCCTCCACAAGCTCCTCGAGCACC
CTTGGATAGTTCAAAACGCTGATCCCTCCGGCGTGTACAGAGGCTAGAACAATCTCTTCC
ACTCTCCTCAATTCGAGGAGAGACCTGATTCTTTTTCATCACTGTTGTTATGGCAAAACA
AGAAAAAAGCAGTAGCCGTACTACTCTACCTGTTGTTTCCGATCCCAGCTGCGCCTGTGT
AGTTACGTGACAACGTGTATGCTCAAGCTTCAGATTTCCTCGATGAAGATTTGAAGCTGT
GTGTGTGGGTTTAACGCGTATGTGTTTTAGCGTGTGTTCACAGCATGGGGTTGTGATATG
TTTTCTGTGCAACGCCCTGTACTTAATGTACTAATCGTATTTCTTATTGGACATCACTCG
ATTAGTCTACAAGATAAAAAAAAAAA

consensusID : consensus_11127#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 357
fasta sequence

                              [TCCCCTTTCCTCAATTGGAGGAGAGACCTGATTTTTTTTCATCCCTGTTGTTAGGGCAAAACAAAAAAAAAGCAGACGCCGGACTACTTTCCCTGTTGTTTCCGATCCCAGCGGGGCCTGGGTAGTTACGTGACAACGGGTATGCTCAAGCTTCAGATTTCCTCGATAAAAATTTAAAACTGGGGGTGGGGGTTTAACGGGTATGTGTTTTAGGGGGTGTTCCCAGCATGGGGTTGTGATATGTTTTTTGGGCAACCCCCTGTACTTAAGGGACTAATGGTATTTTTTATGTGGCCCCCCCTCGATTGGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF331151             [TCCCCTTTCCTCAATTGGAGGAGAGACCTGATTTTTTTTCATCCCTGTTGTTAGGGCAAAACAAAAAAAAAGCAGACGCCGGACTACTTTCCCTGTTGTTTCCGATCCCAGCGGGGCCTGGGTAGTTACGTGACAACGGGTATGCTCAAGCTTCAGATTTCCTCGATAAAAATTTAAAACTGGGGGTGGGGGTTTAACGGGTATGTGTTTTAGGGGGTGTTCCCAGCATGGGGTTGTGATATGTTTTTTGGGCAACCCCCTGTACTTAAGGGACTAATGGTATTTTTTATGTGGCCCCCCCTCGATTGGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_11127#1
TCCCCTTTCCTCAATTGGAGGAGAGACCTGATTTTTTTTCATCCCTGTTGTTAGGGCAAA
ACAAAAAAAAAGCAGACGCCGGACTACTTTCCCTGTTGTTTCCGATCCCAGCGGGGCCTG
GGTAGTTACGTGACAACGGGTATGCTCAAGCTTCAGATTTCCTCGATAAAAATTTAAAAC
TGGGGGTGGGGGTTTAACGGGTATGTGTTTTAGGGGGTGTTCCCAGCATGGGGTTGTGAT
ATGTTTTTTGGGCAACCCCCTGTACTTAAGGGACTAATGGTATTTTTTATGTGGCCCCCC
CTCGATTGGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_11127#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 326
fasta sequence

                              [ACAATCTCTTCCACTCTCCTCAATTCGAGGAGAGACCTGATTCTTTTTCATCACTGTTGTTATGGCAAAACAAGAAAAAAGCAGTAGCCGTACTACTCTACCTGTTGTTTCCGATCCCAGTGCGCCTGTGTAGTTACGTGACAACGTGTATGCTCAAGCTTCAGATTTCCTCGATGAAGATTTGAAGCTGTGTGTGTGGGTTTAACGCGTATGTGTTTTAGCGTGTGTTCACAGCATGGGGTTGTGATATGTTTTCTGTGCAACGCCCTGTACTTAATGTACTAATCGTATTTCTTATTGGANATCACTCGATTAAAAAAAAAAAA]

[+] EMBL AU075433             [ACAATCTCTTCCACTCTCCTCAATTCGAGGAGAGACCTGATTCTTTTTCATCACTGTTGTTATGGCAAAACAAGAAAAAAGCAGTAGCCGTACTACTCTACCTGTTGTTTCCGATCCCAGTGCGCCTGTGTAGTTACGTGACAACGTGTATGCTCAAGCTTCAGATTTCCTCGATGAAGATTTGAAGCTGTGTGTGTGGGTTTAACGCGTATGTGTTTTAGCGTGTGTTCACAGCATGGGGTTGTGATATGTTTTCTGTGCAACGCCCTGTACTTAATGTACTAATCGTATTTCTTATTGGANATCACTCGATTAAAAAAAAAAAA]




>consensus_11127#2
ACAATCTCTTCCACTCTCCTCAATTCGAGGAGAGACCTGATTCTTTTTCATCACTGTTGT
TATGGCAAAACAAGAAAAAAGCAGTAGCCGTACTACTCTACCTGTTGTTTCCGATCCCAG
TGCGCCTGTGTAGTTACGTGACAACGTGTATGCTCAAGCTTCAGATTTCCTCGATGAAGA
TTTGAAGCTGTGTGTGTGGGTTTAACGCGTATGTGTTTTAGCGTGTGTTCACAGCATGGG
GTTGTGATATGTTTTCTGTGCAACGCCCTGTACTTAATGTACTAATCGTATTTCTTATTG
GANATCACTCGATTAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11127#0      CATTCGAATCTCTCCGCCTCGTCGCCGTTGCGGCCGCTCCTCCCCTCCCCTCTCTCTCTT 60
consensus_11127#2      ------------------------------------------------------------
consensus_11127#1      ------------------------------------------------------------
                                                                                   

consensus_11127#0      GTTCCCCCATGGCGATCGCCACCGAGTCGCGCTGCGAGGAGGAGAAGGCTTCGCCGCATT 120
consensus_11127#2      ------------------------------------------------------------
consensus_11127#1      ------------------------------------------------------------
                                                                                   

consensus_11127#0      CGCAGGAGGTGAAGCGGTGGGTGTTGTCTGATTTTGACATCGGGAAGCCCCTCGGGAGGG 180
consensus_11127#2      ------------------------------------------------------------
consensus_11127#1      ------------------------------------------------------------
                                                                                   

consensus_11127#0      GCAAGTTCGGCCATGTTTACTTAGCAAGAGAAAAGAGAAGTAACCATATTGTGGCTTTGA 240
consensus_11127#2      ------------------------------------------------------------
consensus_11127#1      ------------------------------------------------------------
                                                                                   

consensus_11127#0      AAGTACTTTTCAAGAGCCAACTAAAGCAGTCCCAGGTGGAGCATCAGCTACGTCGGGAAG 300
consensus_11127#2      ------------------------------------------------------------
consensus_11127#1      ------------------------------------------------------------
                                                                                   

consensus_11127#0      TTGAGATTCAGAGTCATCTTCGTCATCCCAACATTCTACGGCTGTATGGGTATTTCTATG 360
consensus_11127#2      ------------------------------------------------------------
consensus_11127#1      ------------------------------------------------------------
                                                                                   

consensus_11127#0      ATCAGACCCGTGTGTACTTGATCTTGGAGTATGCCTTAAAAGGTGAACTTTATAAGGAGT 420
consensus_11127#2      ------------------------------------------------------------
consensus_11127#1      ------------------------------------------------------------
                                                                                   

consensus_11127#0      TGCAGAGGTGCAAGCATTTCTCTGAAAGACGTTCAGCGACTTACATTGCATCACTGGCGC 480
consensus_11127#2      ------------------------------------------------------------
consensus_11127#1      ------------------------------------------------------------
                                                                                   

consensus_11127#0      ATGCGCTCATCTACCTTCACGGAAAGCATGTGATCCATAGAGACATTAAACCTGAAAATC 540
consensus_11127#2      ------------------------------------------------------------
consensus_11127#1      ------------------------------------------------------------
                                                                                   

consensus_11127#0      TTTTAATTGGGTCCCAGGGCGAACTGAAAATTGCAGACTTTGGTTGGTCTGTGCACACCT 600
consensus_11127#2      ------------------------------------------------------------
consensus_11127#1      ------------------------------------------------------------
                                                                                   

consensus_11127#0      TCAACAGAAGAAGGACAATGTGTGGAACATTAGATTACCTGCCCCCTGAAATGGTGGAGA 660
consensus_11127#2      ------------------------------------------------------------
consensus_11127#1      ------------------------------------------------------------
                                                                                   

consensus_11127#0      AGACTGAACATGACTACCATGTTGACATTTGGAGCTTGGGGATCCTGTGCTATGAGTTCC 720
consensus_11127#2      ------------------------------------------------------------
consensus_11127#1      ------------------------------------------------------------
                                                                                   

consensus_11127#0      TTTATGGAGTCCCACCTTTCGAAGCAAAAGAACACTCCGAAACATATCGCAGGATTGTGA 780
consensus_11127#2      ------------------------------------------------------------
consensus_11127#1      ------------------------------------------------------------
                                                                                   

consensus_11127#0      AAGTTGACTTGAAGTTCCCACTGAAACCATTCGTGTCCCCGGCTGCGAAAGACCTAATTT 840
consensus_11127#2      ------------------------------------------------------------
consensus_11127#1      ------------------------------------------------------------
                                                                                   

consensus_11127#0      CACAGATGCTCGTGAAGAATTCGGCGCATCGTCTGCCCCTCCACAAGCTCCTCGAGCACC 900
consensus_11127#2      ------------------------------------------------------------
consensus_11127#1      ------------------------------------------------------------
                                                                                   

consensus_11127#0      CTTGGATAGTTCAAAACGCTGATCCCTCCGGCGTGTACAGAGGCTAGAACAATCTCTTCC 960
consensus_11127#2      ------------------------------------------------ACAATCTCTTCC 12
consensus_11127#1      ---------------------------------------------------------TCC 3
                                                                                ***

consensus_11127#0      ACTCTCCTCAATTCGAGGAGAGACCTGATTCTTTTTCATCACTGTTGTTATGGCAAAACA 1020
consensus_11127#2      ACTCTCCTCAATTCGAGGAGAGACCTGATTCTTTTTCATCACTGTTGTTATGGCAAAACA 72
consensus_11127#1      CCTTTCCTCAATTGGAGGAGAGACCTGATTTTTTTTCATCCCTGTTGTTAGGGCAAAACA 63
                        ** ********* **************** ********* ********* *********

consensus_11127#0      AGAAAAAAGCAGTAGCCGTACTACTCTACCTGTTGTTTCCGATCCCAGCTGCGCCTGTGT 1080
consensus_11127#2      AGAAAAAAGCAGTAGCCGTACTACTCTACCTGTTGTTTCCGATCCCAG-TGCGCCTGTGT 131
consensus_11127#1      AAAAAAAAGCAGACGCCGGACTACTTTCCCTGTTGTTTCCGATCCCAGCGGGGCCTGGGT 123
                       * **********  **** ****** * ********************  * ***** **

consensus_11127#0      AGTTACGTGACAACGTGTATGCTCAAGCTTCAGATTTCCTCGATGAAGATTTGAAGCTGT 1140
consensus_11127#2      AGTTACGTGACAACGTGTATGCTCAAGCTTCAGATTTCCTCGATGAAGATTTGAAGCTGT 191
consensus_11127#1      AGTTACGTGACAACGGGTATGCTCAAGCTTCAGATTTCCTCGATAAAAATTTAAAACTGG 183
                       *************** **************************** ** **** ** *** 

consensus_11127#0      GTGTGTGGGTTTAACGCGTATGTGTTTTAGCGTGTGTTCACAGCATGGGGTTGTGATATG 1200
consensus_11127#2      GTGTGTGGGTTTAACGCGTATGTGTTTTAGCGTGTGTTCACAGCATGGGGTTGTGATATG 251
consensus_11127#1      GGGTGGGGGTTTAACGGGTATGTGTTTTAGGGGGTGTTCCCAGCATGGGGTTGTGATATG 243
                       * *** ********** ************* * ****** ********************

consensus_11127#0      TTTTCTGTGCAACGCCCTGTACTTAATGTACTAATCGTATTTCTTAT-TGGACATCACTC 1259
consensus_11127#2      TTTTCTGTGCAACGCCCTGTACTTAATGTACTAATCGTATTTCTTAT-TGGANATCACTC 310
consensus_11127#1      TTTTTTGGGCAACCCCCTGTACTTAAGGGACTAATGGTATTTTTTATGTGGCCCCCCCTC 303
                       **** ** ***** ************ * ****** ****** **** ***    * ***

consensus_11127#0      GATTAGTCTACAAGATAAAAAAAAAAA--------------------------- 1286
consensus_11127#2      GATTA------AAAAAAAAAAA-------------------------------- 326
consensus_11127#1      GATTGGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 357
                       ****       ** * ******