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Oryza sativa
cluster # 11140 cluster # 11140       Sequences # 8       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11140#0 length = 1378 sequences # 8  
consensusID : consensus_11140#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1378
fasta sequence 
                              [ATCCTACTTAAGCAGTAGCTAGTAAGCTAGCTAAGCACACACACACTTACTAATTCAGCTAAGGATTTGGAGGATC-GGAGATGGTGATGGTGAAGCTTAACGCGGCGGTGGCCGCCGCCGCCGTTGTGCTGTCTCTGTTGGTGGTGGTCGCCGTGCATCCGGCGGCGGCCGACGCCGGCGGCGATTGGTACGGCAAGAAGAGCATCGAGGAGACGGTGAGGAAGGAGGTGGAGAAGGCCATCAAGCACAATCCCGGCGTGGGTGCCGCCCTTGTCCGTTTGGTGTTCCATGACTGCTGGGTCAACGGTTGTGATGGATCGGTGCTCTTGGACAAGACGCCGTACAGCAGCAGCACGGAGAAGGCGGCGGCGAACAACATCGGCCTGGACGGCTTCGACGTCATCGACGCCATCAAATCCAAGCTGGGCGCCGCCGTCTCCTGCGCCGACATCGTGGTGCTCGCCGGCCGCGACGCCTCCGCCATCCTCAGCGGCGGCAGGATCACCTACGACGTCGGCACGGGCCGCAAGGACGGCGTCGTCTCCTCCGCCGCCGCCGCCGACGCCGTCCTCCCGGAGTCCACCTTCGACTTCGCCCAGCTCAAGGACAACTTCGCCAGCAAGGGGCTCACCCAGGGGGAGCTCGTCATCCTCTCCGGCGCCCACTCCATCGGCGTCGCCCACCTCTCCTCCTTCCACGACCGCCTCGCCGCCGCCACCGCCACGCCCATAGACGCCACGTACGCGTCGGCGCTCGCCGCCGACGTCGAACGGCAGAAGGGTGTCCAGCGCACGGACAACCCGGCGGAGAAGAACAACATCCGCGACATGGGCGCGGCGTTCCAGAGCGCCGCCGGGTA-CGACGCCGCCGGCGTGGACACGGC-GGCGGTGGGGGCGCTGGACAACAGCTACTACCACAACAACCTGCAGAACCGGGTGCTGTTCAAGTCGGACTGGGTGCTGCGCACCGACGGCGACGCCGCCGCCGACCTCGCCGAGTACAGGGACAACGCCACCAAGTGGGACGTGGACTTCGCCGCCGCCATGGCCAAGCTCAGCAAGCTCCCCGCCGAGGGCACCCACTTCGAGATCAGGAAGACTTGCAGATGCACCAACCAGAACTACTACTAGTAGTAGTAGTAACTAGTCAACGATCGAGTCAGCGGAAAAAAATACGACGGTATTATACTAGTATACGCGTAGTGTACGTACATTAATACGACTACTTGTACGTACCTACTGTAATATCACCTTGGTTTAAAATTATTACTACTGCATCGTTAATCTTAAGTCTTTGATTAATTTTGTAGCTAATGTATAATAAGGGCTTATAATGCAATTCATTTCTAGCATTCTATAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK099362             [ATCCTACTTAAGCAGTAGCTAGTAAGCTAGCTAAGCACACACACACTTACTAATTCAGCTAAGGATTTGGAGGATC GGAGATGGTGATGGTGAAGCTTAACGCGGCGGTGGCCGCCGCCGCCGTTGTGCTGTCTCTGTTGGTGGTGGTCGCCGTGCATCCGGCGGCGGCCGACGCCGGCGGCGATTGGTACGGCAAGAAGAGCATCGAGGAGACGGTGAGGAAGGAGGTGGAGAAGGCCATCAAGCACAATCCCGGCGTGGGTGCCGCCCTTGTCCGTTTGGTGTTCCATGACTGCTGGGTCAACGGTTGTGATGGATCGGTGCTCTTGGACAAGACGCCGTACAGCAGCAGCACGGAGAAGGCGGCGGCGAACAACATCGGCCTGGACGGCTTCGACGTCATCGACGCCATCAAATCCAAGCTGGGCGCCGCCGTCTCCTGCGCGGACATCGTGGTGCTCGCCGGCCGCGACGCCTCCGCCATCCTCAGCGGCGGCAGGATCACCTACGACGTCGGCACGGGCCGCAAGGACGGCGTCGTCTCCTCCGCCGCCGCCGCCGACGCCGTCCTCCCGGAGTCCACCTTCGACTTCGCCCAGCTCAAGGACAACTTCGCCAGCAAGGGGCTCACCCAGGGGGAGCTCGTCATCCTCTCCGGCGCCCACTCCATCGGCGTCGCCCACCTCTCCTCCTTCCACGACCGCCTCGCCGCCGCCACCGCCACGCCCATAGACGCCACGTACGCGTCGGCGCTCGCCGCCGACGTCGAACGGCAGAAGGGTGTCCAGCGCACGGACAACCCGGCGGAGAAGAACAACATCCGCGACATGGGCGCGGCGTTCCAGAGCGCCGCCGGGTA CGACGCCGCCGGCGTGGACACGGC GGCGGTGGGGGCGCTGGACAACAGCTACTACCACAACAACCTGCAGAACCGGGTGCTGTTCAAGTCGGACTGGGTGCTGCGCACCGACGGCGACGCCGCCGCCGACCTCGCCGAGTACAGGGACAACGCCACCAAGTGGGACGTGGACTTCGCCGCCGCCATGGCCAAGCTCAGCAAGCTCCCCGCCGAGGGCACCCACTTCGAGATCAGGAAGACTTGCAGATGCACCAACCAGAACTACTACTAGTAGTAGTAGTAACTAGTCAACGATCGAGTCAGCGGAAAAAAATACGACGGTATTATACTAGTATACGCGTAGTGTACGTACATTAATACGACTACTTGTACGTACCTACTGTAATATCACCTTGGTTTAAAATTATTACTACTGCATCGTTAATCTTAAGTCTTTGATTAATTTTGTAGCTAATGTATAATAAGGG                                                    ]
[+] EMBL AK064360             [ TCCTACTTAAGCAGTAGCTAGTAAGCTAGCTAAGCACACACACACTTACTAATTCAGCTAAGGATTTGGAGGATC GGAGATGGTGATGGTGAAGCTTAACGCGGCGGTGGCCGCCGCCGCCGTTGTGCTGTCTCTGTTGGTGGTGGTCGCCGTGCATCCGGCGGCGGCCGACGCCGGCGGCGATTGGTACGGCAAGAAGAGCATCGAGGAGACGGTGAGGAAGGAGGTGGAGAAGGCCATCAAGCACAATCCCGGCGTGGGTGCCGCCCTTGTCCGTTTGGTGTTCCATGACTGCTGGGTCAACGGTTGTGATGGATCGGTGCTCTTGGACAAGACGCCGTACAGCAGCAGCACGGAGAAGGCGGCGGCGAACAACATCGGCCTGGACGGCTTCGACGTCATCGACGCCATCAAATCCAAGCTGGGCGCCGCCGTCTCCTGCGCCGACATCGTGGTGCTCGCCGGCCGCGACGCCTCCGCCATCCTCAGCGGCGGCAGGATCACCTACGACGTCGGCACGGGCCGCAAGGACGGCGTCGTCTCCTCCGCCGCCGCCGCCGACGCCGTCCTCCCGGAGTCCACCTTCGACTTCGCCCAGCTCAAGGACAACTTCGCCAGCAAGGGGCTCACCCAGGGGGAGCTCGTCATCCTCTCCGGCGCCCACTCCATCGGCGTCGCCCACCTCTCCTCCTTCCACGACCGCCTCGCCGCCGCCACCGCCACGCCCATAGACGCCACGTACGCGTCGGCGCTCGCCGCCGACGTCGAACGGCAGAAGGGTGTCCAGCGCACGGACAACCCGGCGGAGAAGAACAACATCCGCGACATGGGCGCGGCGTTCCAGAGCGCCGCCGGGTA CGACGCCGCCGGCGTGGACACGGC GGCGGTGGGGGCGCTGGACAACAGCTACTACCACAACAACCTGCAGAACCGGGTGCTGTTCAAGTCGGACTGGGTGCTGCGCACCGACGGCGACGCCGCCGCCGACCTCGCCGAGTACAGGGACAACGCCACCAAGTGGGACGTGGACTTCGCCTCCGCCATGGCCAAGCTCAGCAAGCTCCCCGCCGAGGGCACCCACTTCGAGATCAGGAAGACTTGCAGATGCACCAACCAGAACTACTACTAGTAGTAGTAGTAACTAGTCAACGATCGAGTCAGCGGAAAAAAATACGACGGTATTATACTAGTATACGCGTAGTGTACGTACATTAATACGACTACTTGTACGTACCTACTGTAATATCACCTTGGTTTAAAATTATTACTACTGCATCGTTAATCTTAAGTCTTTGATTAATTTTGTAGCTAATGTATAATAAGGGCTTATAATGCAATTCATTTCT                               ]
[+] EMBL AK102034             [                               TAAGCACACACACACTTACTAATTCAGCTAAGGATTTGGAGGATC GGAGATGGTGATGGTGAAGCTTAACGCGGCGGTGGCCGCCGCCGCCGTTGTGCTGTCTCTGTTGGTGGTGGTCGCCGTGCATCCGGCGGCGGCCGACGCCGGCGGCGATTGGTACGGCAAGAAGAGCATCGAGGAGACGGTGAGGAAGGAGGTGGAGAAGGCCATCAAGCACAATCCCGGCGTGGGTGCCGCCCTTGTCCGTTTGGTGTTCCATGACTGCTGGGTCAACGGTTGTGATGGATCGGTGCTCTTGGACAAGACGCCGTACAGCAGCAGCACGGAGAAGGCGGCGGCGAACAACATCGGCCTGGACGGCTTCGACGTCATCGACGCCATCAAATCCAAGCTGGGCGCCGCCGTCTCCTGCGCCGACATCGTGGTGCTCGCCGGCCGCGACGCCTCCGCCATCCTCAGCGGCGGCAGGATCACCTACGACGTCGGCACGGGCCGCAAGGACGGCGTCGTCTCCTCCGCCGCCGCCGCCGACGCCGTCCTCCCGGAGTCCACCTTCGACTTCGCCCAGCTCAAGGACAACTTCGCCAGCAAGGGGCTCACCCAGGGGGAGCTCGTCATCCTCTCCGGCGCCCACTCCATCGGCGTCGCCCACCTCTCCTCCTTCCACGACCGCCTCGCCGCCGCCACCGCCACGCCCATAGACGCCACGTACGCGTCGGCGCTCGCCGCCGACGTCGAACGGCAGAAGGGTGTCCAGCGCACGGACAACCCGGCGGAGAAGAACAACATCCGCGACATGGGCGCGGCGTTCCAGAGCGCCGCCGGGTA CGACGCCGCCGGCGTGGACACGGC GGCGGTGGGGGCGCTGGACAACAGCTACTACCACAACAACCTGCAGAACCGGGTGCTGTTCAAGTCGGACTGGGTGCTGCGCACCGACGGCGACGCCGCCGCCGACCTCGCCGAGTACAGGGACAACGCCACCAAGTGGGACGTGGACTTCGCCGCCGCCATGGCCAAGCTCAGCAAGCTCCCCGCCGAGGGCACCCACTTCGAGATCAGGAAGACTTGCAGATGCACCAACCAGAACTACTACTAGTAGTAGTAGTAACTAGTCAACGATCGAGTCAGCGGAAAAAAATACGACGGTATTATACTAGTATACGCGTAGTGTACGTACATTAATACGACTACTTGTACGTACCTACTGTAATATCACCTTGGTTTAAAATTATTACTACTGCATCGTTAATCTTAAGTCTTTGATTAATTTTGTAGCTAATGTATAATAAG                                                      ]
[+] EMBL OSR16741A            [                                                                ATTTGGAGGATCTGGAGATGGTGATGGTGAAGCTTAACGNGGCGGTGGCCG CG CGCCGTTGTGCTGTCTCTGTTGGTGGTGGTCGCCGTGCATCCGGCGGCGGCCGACG CGGCGGCGATTGGTACGGCAAGAAGAGCATCGAGGAGACGGTGAGGAAGGAGGTGGAGAAGGCCATCAAGCACAATCCCGGCGTGGGTTCCGCCCTTNTCCGTTTGGTGTTCCATGACTNCTGGGTCAACGGTTGTAATGGATCGGTGCTCTTGGACAAGACGCCGTACAGCAGCAGCACGGAGAAGNCGGCGGCGAACAACATCGGCCTTGACGGCTTCGACGTCATCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSR12151A            [                                                                                                                                                                                                                                                                                                                                 GTGCTCTTGGACAAGACGCCGTACAGCAGCAGCACGGAGAAGGNGGCGGCGAACAACATCGGCCTGGACGGCTTCGACGTCATCGACGCCATCAAATCCAAGCTGGGNGCCGCCGTCTCCTGCGCCGACATCGTGGTGCTCGCCGGCCGCGACGCCTCCGNCATCCTCAGCGGCGGCAGGTTCACCTACGACGTCGGCACGGGCCGCANGGACGGCGTCGTCTCCTCCGCCGCCGNNGCCGACGCCGTCCTCCCGGAGTCCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU098344             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCGACATGGGCNCGGCGTTCCAGAGCGCCGCCGGGTACCAACGCCGCNGGCGTGGACACGACGGGCGGTGGGGGCGCTGGACAACAGCTACTACCACAACAACCTGCAGAACCGGGTGCTGTTCAAGTCGGACTGGGTGCTGCGCACCGACGGCGACGCCGCCGCCGACCTCGCCGAGTACAGGGACAACGCCACCAAGTGGGACGTGGACTTCGCCGCCGCCATGGCCAAGCTCAGCAAGCTCCCCGCCGAGGGCACCCACTTCGAGATCAGGAAGACTTGCAGATGCACCAACCAGAACTACTACTAGTAGTAGTAGTAACTAGTCAACGATCGAGTCAGCGGAAAAAAATACGACGGTATTATACTAGTATACGCGTAGTGTACGTACATTAATACGACTACTTGTACGTACCTACTGTAATATCACCTTGGTTTAAAATTATTACTACTGCATCGTTAATCTTAAGTCTTTGATTAATTTTGTAGCTAATGTATAATAAGGGCTTATAATGCAATTCATTTCTAGCATTCTATAAAAA                ]
[+] EMBL C20484               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AACGCCACCAAGTGGGACGTGGACTTCGCCGCCGCCATGGCCAAGCTCAGCAAGCTCCCCGCCGAGGGCACCCACTTCGAGATNAGGAAGACTTGCAGATGCNCCAACCAGAACTACTACTAGTAGTAGTAGTAACTAGTCANCGATCGAGTCAGCGGAAAAAAATACGACGGTATTATACTAGTATACNCGTAGTGTACGTACATTAATACGACTACTTGTNCGTACCTACTGTAATATCNCCTTGGTTTAAAATTATTACTACTGCATCGTTAATCTTAAGTCTTTGATTAATTTTGTAGCTAATGTATAATAAGGGCTTATAATGCAATTCATTTCTAGNATTCTATAATAAAAAAAAA         ]
[+] EMBL CA755063             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCAGATGCACCAACCAGAACTACTACTAGTAGTAGTAGTAACTAGTCAACGATCGAGTCAGCGGAAAAAAATACGACGGTATTATACTAGTATACGCGTAGTGTACGTACATTAATACGACTACTTGTACGTACCTACTGTAATATCACCTTGGTTTAAAATTATTACTACTGCATCGTTAATCTTAAGTCTTTGATTAATTTTGTAGCTNATGTATAATAAGGGCTTATAATGCAATTCATTTCTAGCATTCTATAANANAAAAAAAAAAAAAAAA]




>consensus_11140#0
ATCCTACTTAAGCAGTAGCTAGTAAGCTAGCTAAGCACACACACACTTACTAATTCAGCT
AAGGATTTGGAGGATCGGAGATGGTGATGGTGAAGCTTAACGCGGCGGTGGCCGCCGCCG
CCGTTGTGCTGTCTCTGTTGGTGGTGGTCGCCGTGCATCCGGCGGCGGCCGACGCCGGCG
GCGATTGGTACGGCAAGAAGAGCATCGAGGAGACGGTGAGGAAGGAGGTGGAGAAGGCCA
TCAAGCACAATCCCGGCGTGGGTGCCGCCCTTGTCCGTTTGGTGTTCCATGACTGCTGGG
TCAACGGTTGTGATGGATCGGTGCTCTTGGACAAGACGCCGTACAGCAGCAGCACGGAGA
AGGCGGCGGCGAACAACATCGGCCTGGACGGCTTCGACGTCATCGACGCCATCAAATCCA
AGCTGGGCGCCGCCGTCTCCTGCGCCGACATCGTGGTGCTCGCCGGCCGCGACGCCTCCG
CCATCCTCAGCGGCGGCAGGATCACCTACGACGTCGGCACGGGCCGCAAGGACGGCGTCG
TCTCCTCCGCCGCCGCCGCCGACGCCGTCCTCCCGGAGTCCACCTTCGACTTCGCCCAGC
TCAAGGACAACTTCGCCAGCAAGGGGCTCACCCAGGGGGAGCTCGTCATCCTCTCCGGCG
CCCACTCCATCGGCGTCGCCCACCTCTCCTCCTTCCACGACCGCCTCGCCGCCGCCACCG
CCACGCCCATAGACGCCACGTACGCGTCGGCGCTCGCCGCCGACGTCGAACGGCAGAAGG
GTGTCCAGCGCACGGACAACCCGGCGGAGAAGAACAACATCCGCGACATGGGCGCGGCGT
TCCAGAGCGCCGCCGGGTACGACGCCGCCGGCGTGGACACGGCGGCGGTGGGGGCGCTGG
ACAACAGCTACTACCACAACAACCTGCAGAACCGGGTGCTGTTCAAGTCGGACTGGGTGC
TGCGCACCGACGGCGACGCCGCCGCCGACCTCGCCGAGTACAGGGACAACGCCACCAAGT
GGGACGTGGACTTCGCCGCCGCCATGGCCAAGCTCAGCAAGCTCCCCGCCGAGGGCACCC
ACTTCGAGATCAGGAAGACTTGCAGATGCACCAACCAGAACTACTACTAGTAGTAGTAGT
AACTAGTCAACGATCGAGTCAGCGGAAAAAAATACGACGGTATTATACTAGTATACGCGT
AGTGTACGTACATTAATACGACTACTTGTACGTACCTACTGTAATATCACCTTGGTTTAA
AATTATTACTACTGCATCGTTAATCTTAAGTCTTTGATTAATTTTGTAGCTAATGTATAA
TAAGGGCTTATAATGCAATTCATTTCTAGCATTCTATAAAAAAAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)