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Oryza sativa
cluster # 11141 cluster # 11141       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11141#0 length = 1995 sequences # 6  
consensus_11141#1 length = 1782 sequences # 2  

consensusID : consensus_11141#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1995
fasta sequence
                              [TTTTTGCCAAGTCCAACGTCGCGCGAGGCGAGGCGAGGCGAGGCGAGAGGAGGAGTGGAGACCACCGCCGCCGCGGCGCGCGCGCGCTCGGAGATCTCGCCGCGGTAGCGCAGCGCGGGTGCCGTGCCCTGATCCGTCCGTGCGATGAAAGAGCCCGCGCAGGTGAGGACGGCGCGGGGCGGCGCGGCGGATGGGGTGGAGGTGGGGGTGGAGGAGGAGGAGGAGCCGCCGCGATCGGCGACGGTGAAGCAGGAGGAGGCGAACGCGGTGCTCGGGGCGGAGGGGTCCCGCCCGTTCGCCATGCGGGAGCTCAAGGAGGACCACGAGGTCGCGGCCGGGAGCGGCGTGAAGGCGGCGTCTGGGGAGAGGAACGGGATCGGATCGGCGGATGCCCAGGGTTCGTCGTACAGCCAAGAGAGTATGCAGCAGTTTTCATCCCATCATGATGTTGCAATGGACTTAATAAATAGTGTCACTGGAGTTGACGAGGAAGGCCGTTCTCGCCAGAGGATTCTTTCTTTTGCTGCCAAAAGATACATAAGCGCAATAGAAAGAAATCATGATGACCCTGATGCATATTATAATTGGGCCCTTGTTCTCCAGGAGAGTGCAGACAATGTAGATCCAAATTCTAGTTCGTCCAAAGATGCATTGCTTGAGGAGGCTTGCAAAAAGTATGCTGAAGCTACCCGTCTTTGCCCAACTCTTTATGATGCATATTATAACTGGGCTATCGCTATTGCTGATCGGGCTAAAATGCGAGGTCGTACTAAAGAAGCTGAAGAGCTCTGGAAGCAGGCAATACTGAATTATGAGAAGGCTGTCCAGCTAAATTGGAATAGTCCGCAGGCTCTTAATAATTGGGGTCTTGGACTACAGGAACTGAGTGCAATTGTTCCGGCTCGTGAGAAGCAAACCATCATAAAAACAGCTATAAGTAAGTTTCGAGCTGCAATTCAACTGCAATTTGATTTCCATCGGGCAATATACAATCTTGGGACAGTCTTGTATGGTTTAGCTGAGGATACAATGAGGTCTGGGAAGCCAGGTGTGTCCGCTAGCGAGTTTTACAGTCAGTCTGCTATCTATGTTGCAGCTGCCCATGCACTGAAGCCAAATTACTCGGTCTACCGCAGTGCTTTGCGATTAGTCCGTTCAATGCTGCCTTTGCCATATCTCAAAGTGGGATATTTGATTGCTCCTCCAGAAAATAGTGCCATTGCACCACACAAAGAATGGGAGAGGTCACAGTTTGTTTTGAACCATGAAGAACTCCAGCAGGTCAATGCCTCTGACCAGCCTCCATCACAATCACCTGGGCATGTGGACAGCGGCAGAAAGCTTTTCAGGATAGTTGTTGCAGACATTGTTTCTGTGTCAGCATGCGCTGATCTAACCCTGCCACCCGGTGCTGGCCTTCGCATCGATACTATTCATGGCCCTAGATTCTTGGTTGCTGATAACTGGGAGACCATTGACAGTTGGCTAGACGCTATACGCCTAGTCTACACCATATTTGCAAGAGGGAGGAGTGATGTCCTTGCTGGGATTATTACTGGCTGATGGCTCGCTGCTAGTGAAAAACTG-CCAACAAGTATAGGCCAAGAGACTGTAGGAGTATGTCCCGGAATCAGATAGAAGTATCATAGAACTCATGGTTTTAGTAGGCGTAAGAGCAGATGTTATTTGTAACCCATTTATGGACTGGTAGGTCATAGGCCAATTTTCCTTTGTACTGTGGCGTTGTGTCGTCATGGTACATATGATGTGATATAAGAAATAAAAACCGTAATATCCTCTCTAGCCTGTGAATAAAGATGCAACGGCTTGTGGCAGGCGAGTAGGTTGTGTGAACTGCTGTCCTATCTCCCTCTCAAAGAAGGAATAAAATGTTTCCCCTATCTGTTTTTCAGCCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK099732             [TTTTTGCCAAGTCCAACGTCGCGCGAGGCGAGGCGAGGCGAGGCGAGAGGAGGAGTGGAGACCACCGCCGCCGCGGCGCGCGCGCGCTCGGAGATCTCGCCGCGGTAGCGCAGCGCGGGTGCCGTGCCCTGATCCGTCCGTGCGATGAAAGAGCCCGCGCAGGTGAGGACGGCGCGGGGCGGCGCGGCGGATGGGGTGGAGGTGGGGGTGGAGGAGGAGGAGGAGCCGCCGCGATCGGCGACGGTGAAGCAGGAGGAGGCGAACGCGGTGCTCGGGGCGGAGGGGTCCCGCCCGTTCGCCATGCGGGAGCTCAAGGAGGACCACGAGGTCGCGGCCGGGAGCGGCGTGAAGGCGGCGTCTGGGGAGAGGAACGGGATCGGATCGGCGGATGCCCAGGGTTCGTCGTACAGCCAAGAGAGTATGCAGCAGTTTTCATCCCATCATGATGTTGCAATGGACTTAATAAATAGTGTCACTGGAGTTGACGAGGAAGGCCGTTCTCGCCAGAGGATTCTTTCTTTTGCTGCCAAAAGATACATAAGCGCAATAGAAAGAAATCATGATGACCCTGATGCATATTATAATTGGGCCCTTGTTCTCCAGGAGAGTGCAGACAATGTAGATCCAAATTCTAGTTCGTCCAAAGATGCATTGCTTGAGGAGGCTTGCAAAAAGTATGCTGAAGCTACCCGTCTTTGCCCAACTCTTTATGATGCATATTATAACTGGGCTATCGCTATTGCTGATCGGGCTAAAATGCGAGGTCGTACTAAAGAAGCTGAAGAGCTCTGGAAGCAGGCAATACTGAATTATGAGAAGGCTGTCCAGCTAAATTGGAATAGTCCGCAGGCTCTTAATAATTGGGGTCTTGGACTACAGGAACTGAGTGCAATTGTTCCGGCTCGTGAGAAGCAAACCATCATAAAAACAGCTATAAGTAAGTTTCGAGCTGCAATTCAACTGCAATTTGATTTCCATCGGGCAATATACAATCTTGGGACAGTCTTGTATGGTTTAGCTGAGGATACAATGAGGTCTGGGAAGCCAGGTGTGTCCGCTAGCGAGTTTTACAGTCAGTCTGCTATCTATGTTGCAGCTGCCCATGCACTGAAGCCAAATTACTCGGTCTACCGCAGTGCTTTGCGATTAGTCCGTTCAATGCTGCCTTTGCCATATCTCAAAGTGGGATATTTGATTGCTCCTCCAGAAAATAGTGCCATTGCACCACACAAAGAATGGGAGAGGTCACAGTTTGTTTTGAACCATGAAGAACTCCAGCAGGTCAATGCCTCTGACCAGCCTCCATCACAATCACCTGGGCATGTGGACAGCGGCAGAAAGCTTTTCAGGATAGTTGTTGCAGACATTGTTTCTGTGTCAGCATGCGCTGATCTAACCCTGCCACCCGGTGCTGGCCTTCGCATCGATACTATTCATGGCCCTAGATTCTTGGTTGCTGATAACTGGGAGACCATTGACAGTTGGCTAGACGCTATACGCCTAGTCTACACCATATTTGCAAGAGGGAGGAGTGATGTCCTTGCTGGGATTATTACTGGCTGATGGCTCGCTGCTAGTGAAAAACTG CCAACAAGTATAGGCCAAGAGACTGTAGGAGTATGTCCCGGAATCAGATAGAAGTATCATAGAACTCATGGTTTTAGTAGGCGTAAGAGCAGATGTTATTTGTAACCCATTTATGGACTGGTAGGTCATAGGCCAATTTTCCTTTGTACTGTGGCGTTGTGTCGTCATGGTACATATGATGTGATATAAGAAATAAAAACCGTAATATCCTCTCTAGCCTGTGAATAAAGATGCAACGGCTTGTGGCAGGCGAGTAGGTTGTGTGAACTGCTGTCCTATCTCCCTCTCAAAGAAGGAATAAAATGTTTCCCCTATCTGTTTT                                                                                      ]
[+] EMBL AU222657             [                   CGCGCGAGGCGAGGCGAGGCGAGGCGAGAGGAGGAGTGGAGACCACCGCCGCCGCGGCGCGCGCGCGCTCGGAGATCTCGCCGCGGTAGCGCAGCGCGGGTGCCGTGCCCTGATCCGTCCGTGCGATGAAAGAGCCCGCGCAGGTGAGGACGGCGCGGGGCGGCGCGGCGGATGGGGTGGAGGTGGGGGTGGAGGAGGAGGAGGAGCCGCCGCGATATGCGACGGTGAAGCAGGAGGAGGCGAACGCGGTGCTCGGGGCGGAGGGGTCCCGCCCGTTCNCCATGCGGGAGCTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU058120             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CATATTTGCAAGAGGGAGGAGTGATGTCCTTGCTGGGATTATTACTGGCTGATGGCTCGCTGCTAGTGAAAAACTGCCCAACAAGTATAGGCCAAGAGACTGTAGGAGTATGTCCCGGAATCAGATAGAAGTATCATAGAACTCATGGTTTTAGTAGGCGTAAGAGCAGATGTTATTTGTAACCCATTTATGGACTGGTAGGTCATAGGCCAATTTTCCTTTGTACTGTGGCGTTGTGTCGTCATGGTACATATGATGTGATATAAGAAATAAAAACCGTAATATCCTCTCTAGCCTGTGAATAAAGATGCAACGGCTTNTGGCAGGCGAGTAGGTTGTGTGAACTGCTGTCCTATCTCCCTCTCAAAGAAGGAATAAAATGTTTCCCCTATCTGTTTTTCAGCCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA                                              ]
[+] EMBL CF317402             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATCAGATAGAAGTATCATAGAACTCATGGTTTTAGTAGGCGTAAGAGCAGATGTTATTTGTAACCCATTTATGGACTGGTAGGTCATAGGTCAATTTTCCTTTGTACTGTGGCGTTGTGTCGTCATGGTACATATGATGTGATATAAGAAATAAAAACC                                                                                                                                                                                                               ]
[+] EMBL AU056420             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              nTCAGATAGAAGTATCATAGAACTCATGGTTTTAGTAGGCGTAAGAGCAGATGTTATTTGTANCCCATTTATGGACTGGTAGGTCATAGGCCAATTTTCCTTTGTACTGTGGCGTTGTGTCGTCATGGTACATATGATGTGATATAAGAAATAAAAACCGTAATATCCTCTCTAGCCTGTGAATAAAGATGCAACGGCTTGTGGCAGGCGAGTAGGTTGTGTGAACTGCTGTCCTATCTCCCTCTCAAAGAAGGAATAAAATGTTTCCCCTATCTGTTTTTCAGCCTTCAAAAAAAA                                                                     ]
[+] EMBL CF330405             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TATCTCCCTCTCAAAGAAGGAATAAAATGTTTCCCCTATCTGTTTTTCAGCCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_11141#0 TTTTTGCCAAGTCCAACGTCGCGCGAGGCGAGGCGAGGCGAGGCGAGAGGAGGAGTGGAG ACCACCGCCGCCGCGGCGCGCGCGCGCTCGGAGATCTCGCCGCGGTAGCGCAGCGCGGGT GCCGTGCCCTGATCCGTCCGTGCGATGAAAGAGCCCGCGCAGGTGAGGACGGCGCGGGGC GGCGCGGCGGATGGGGTGGAGGTGGGGGTGGAGGAGGAGGAGGAGCCGCCGCGATCGGCG ACGGTGAAGCAGGAGGAGGCGAACGCGGTGCTCGGGGCGGAGGGGTCCCGCCCGTTCGCC ATGCGGGAGCTCAAGGAGGACCACGAGGTCGCGGCCGGGAGCGGCGTGAAGGCGGCGTCT GGGGAGAGGAACGGGATCGGATCGGCGGATGCCCAGGGTTCGTCGTACAGCCAAGAGAGT ATGCAGCAGTTTTCATCCCATCATGATGTTGCAATGGACTTAATAAATAGTGTCACTGGA GTTGACGAGGAAGGCCGTTCTCGCCAGAGGATTCTTTCTTTTGCTGCCAAAAGATACATA AGCGCAATAGAAAGAAATCATGATGACCCTGATGCATATTATAATTGGGCCCTTGTTCTC CAGGAGAGTGCAGACAATGTAGATCCAAATTCTAGTTCGTCCAAAGATGCATTGCTTGAG GAGGCTTGCAAAAAGTATGCTGAAGCTACCCGTCTTTGCCCAACTCTTTATGATGCATAT TATAACTGGGCTATCGCTATTGCTGATCGGGCTAAAATGCGAGGTCGTACTAAAGAAGCT GAAGAGCTCTGGAAGCAGGCAATACTGAATTATGAGAAGGCTGTCCAGCTAAATTGGAAT AGTCCGCAGGCTCTTAATAATTGGGGTCTTGGACTACAGGAACTGAGTGCAATTGTTCCG GCTCGTGAGAAGCAAACCATCATAAAAACAGCTATAAGTAAGTTTCGAGCTGCAATTCAA CTGCAATTTGATTTCCATCGGGCAATATACAATCTTGGGACAGTCTTGTATGGTTTAGCT GAGGATACAATGAGGTCTGGGAAGCCAGGTGTGTCCGCTAGCGAGTTTTACAGTCAGTCT GCTATCTATGTTGCAGCTGCCCATGCACTGAAGCCAAATTACTCGGTCTACCGCAGTGCT TTGCGATTAGTCCGTTCAATGCTGCCTTTGCCATATCTCAAAGTGGGATATTTGATTGCT CCTCCAGAAAATAGTGCCATTGCACCACACAAAGAATGGGAGAGGTCACAGTTTGTTTTG AACCATGAAGAACTCCAGCAGGTCAATGCCTCTGACCAGCCTCCATCACAATCACCTGGG CATGTGGACAGCGGCAGAAAGCTTTTCAGGATAGTTGTTGCAGACATTGTTTCTGTGTCA GCATGCGCTGATCTAACCCTGCCACCCGGTGCTGGCCTTCGCATCGATACTATTCATGGC CCTAGATTCTTGGTTGCTGATAACTGGGAGACCATTGACAGTTGGCTAGACGCTATACGC CTAGTCTACACCATATTTGCAAGAGGGAGGAGTGATGTCCTTGCTGGGATTATTACTGGC TGATGGCTCGCTGCTAGTGAAAAACTGCCAACAAGTATAGGCCAAGAGACTGTAGGAGTA TGTCCCGGAATCAGATAGAAGTATCATAGAACTCATGGTTTTAGTAGGCGTAAGAGCAGA TGTTATTTGTAACCCATTTATGGACTGGTAGGTCATAGGCCAATTTTCCTTTGTACTGTG GCGTTGTGTCGTCATGGTACATATGATGTGATATAAGAAATAAAAACCGTAATATCCTCT CTAGCCTGTGAATAAAGATGCAACGGCTTGTGGCAGGCGAGTAGGTTGTGTGAACTGCTG TCCTATCTCCCTCTCAAAGAAGGAATAAAATGTTTCCCCTATCTGTTTTTCAGCCTTCAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAA



consensusID : consensus_11141#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1782
fasta sequence
                              [CTAGTGGCTCGGCTCGGCTCGCGTCCTCTTCCTCCTCGCATCGCATCGCATCGCATCGCCCAGATCTCCCGCCGAGTTAGATCCTAATCCGAGGAGAGACTCGAGTCATGGAGGATTCTGCGCGGCCGACGCCCGCTGACTCCGGGGAGCTCCCCAACGGCGCGGGGATGGCGGAGGATGCGGTGGTGGCGCCCGACGCGGGGGAGGCTCCGGAGGAGGGGGAGGAATCGGGAATTGCGAACGATTCGGAGACGAACGCGGCTCTGGGCGCAGAGGGCGAGCCCTCGCGGGCGCTCACCATGCGGGAGCTGCTTGGGGAGCTCAAGGACAGCGGGGAGCCCTCGTCGGGGAGATCCACGCTTTCGGAGGGCAATGGGATCGGATCTGCCGGTGCGGAGCGCGCCAGCCAGGACAGCCTACAGTTCTCATCCCATCATGATGTTGCCATGGACTTGATAAATAGTGTCACTGGAGTTGACGAGGAAGGTCGTTCTCGTCAACGCATTCTTTCCTTTGCTGCCAAAAGATATGTTAGTGCCATCGAAAGAAATCCGGAAGATCCAGATGCATACTATAATTGGGCCCTAGTCCTCCAGGAAAGTGCAGATAATGTGGATCCTGATTCTAGTTCTTCAAAAGATTCATTACTCGAGGAGGCTTGCAAAAAGTACGCTGAAGCTACACGACTCTGCCCAACGCTATATGATGCATATTACAACTGGGCTATTGCTATTGCTGATCGAGCCAAAATGCGTGGACGTACCAAAGAGGCTGAAGAACTCTGGAAGCAGGCTATAATGAATTATGACAAGGCAGTCCAGTTAAATTGGAACAGCCCCCAGGCCCTCAACAACTGGGGTTTGGGACTACAGGAGCTGAGCGCAATTGTTCCAGCCCGAGATAAACAAACAATCATAAAAACAGCTATAAGCAAGTTTCGATCTGCAATCCAGTTGCAATTTGATTTCCACCGGGCTATTTACAATCTTGGAACTGTCCTGTATGGGTTAGCAGAGGATACAATGAGGTCTGCAGGTCCAGATGTCTCTCCAAATGACTTGTACAGTCAGTCCGCCATTTATGTCGCAGCTGCTCATGCATTGAAGCCAAATTATTCAGTTTATCGCAGTGCTCTACGTCTGGTTCGATCAATGCTACCTTTACCATATCTAAAAGCTGGGTATCTAACTGCTCCTCCAGCAGACAACACCATTGCACCACATAAACATTGGGAAAGGTCAGAATTTGTCTTAAACCATGAGGGACTCCAGCAGGTCGATGCCTCTGAAAGCCCTTCTAGCAAACCCCTTGGACATATGGGGAGAAGCAAAAAATATATTAAAGTAGCTGTTGAAGATATCGTTTCAGTGTCTGCATGCTCCGATCTAACACTGCCACCTGGTGCTGGCCTTTGTATAGAAACAATTCACGGGCCTTTGTTCTTGGTTGCTGATACCTGGGAGTCTCTTGATGGTTGGTTAGATGCTATACGCTTAGTGTACACCATATTTGCACGAGGAAAAAGTGATGTATTGGCAGGTATCATTACTGGTTGATCTATTGTTGTATGTACGAGTGCGTCGAGCAACAGATATGTCCATTTTAACCACCCATATTCTTTTAATCAGCTTGATTGCTCCGAGTGTTTTCTTCCTTATCTCGCATCTGTAGAGTACAAGTTGATCTGTAGGTCCCTACCAAAGTACCAATCATAGGCTACGTCCGACACATTTTTTGTATCTTTGTATGTGTAAAACATGTCAATGTCATTGAAGTACGACT]

[+] EMBL AK065925             [CTAGTGGCTCGGCTCGGCTCGCGTCCTCTTCCTCCTCGCATCGCATCGCATCGCATCGCCCAGATCTCCCGCCGAGTTAGATCCTAATCCGAGGAGAGACTCGAGTCATGGAGGATTCTGCGCGGCCGACGCCCGCTGACTCCGGGGAGCTCCCCAACGGCGCGGGGATGGCGGAGGATGCGGTGGTGGCGCCCGACGCGGGGGAGGCTCCGGAGGAGGGGGAGGAATCGGGAATTGCGAACGATTCGGAGACGAACGCGGCTCTGGGCGCAGAGGGCGAGCCCTCGCGGGCGCTCACCATGCGGGAGCTGCTTGGGGAGCTCAAGGACAGCGGGGAGCCCTCGTCGGGGAGATCCACGCTTTCGGAGGGCAATGGGATCGGATCTGCCGGTGCGGAGCGCGCCAGCCAGGACAGCCTACAGTTCTCATCCCATCATGATGTTGCCATGGACTTGATAAATAGTGTCACTGGAGTTGACGAGGAAGGTCGTTCTCGTCAACGCATTCTTTCCTTTGCTGCCAAAAGATATGTTAGTGCCATCGAAAGAAATCCGGAAGATCCAGATGCATACTATAATTGGGCCCTAGTCCTCCAGGAAAGTGCAGATAATGTGGATCCTGATTCTAGTTCTTCAAAAGATTCATTACTCGAGGAGGCTTGCAAAAAGTACGCTGAAGCTACACGACTCTGCCCAACGCTATATGATGCATATTACAACTGGGCTATTGCTATTGCTGATCGAGCCAAAATGCGTGGACGTACCAAAGAGGCTGAAGAACTCTGGAAGCAGGCTATAATGAATTATGACAAGGCAGTCCAGTTAAATTGGAACAGCCCCCAGGCCCTCAACAACTGGGGTTTGGGACTACAGGAGCTGAGCGCAATTGTTCCAGCCCGAGATAAACAAACAATCATAAAAACAGCTATAAGCAAGTTTCGATCTGCAATCCAGTTGCAATTTGATTTCCACCGGGCTATTTACAATCTTGGAACTGTCCTGTATGGGTTAGCAGAGGATACAATGAGGTCTGCAGGTCCAGATGTCTCTCCAAATGACTTGTACAGTCAGTCCGCCATTTATGTCGCAGCTGCTCATGCATTGAAGCCAAATTATTCAGTTTATCGCAGTGCTCTACGTCTGGTTCGATCAATGCTACCTTTACCATATCTAAAAGCTGGGTATCTAACTGCTCCTCCAGCAGACAACACCATTGCACCACATAAACATTGGGAAAGGTCAGAATTTGTCTTAAACCATGAGGGACTCCAGCAGGTCGATGCCTCTGAAAGCCCTTCTAGCAAACCCCTTGGACATATGGGGAGAAGCAAAAAATATATTAAAGTAGCTGTTGAAGATATCGTTTCAGTGTCTGCATGCTCCGATCTAACACTGCCACCTGGTGCTGGCCTTTGTATAGAAACAATTCACGGGCCTTTGTTCTTGGTTGCTGATACCTGGGAGTCTCTTGATGGTTGGTTAGATGCTATACGCTTAGTGTACACCATATTTGCACGAGGAAAAAGTGATGTATTGGCAGGTATCATTACTGGTTGATCTATTGTTGTATGTACGAGTGCGTCGAGCAACAGATATGTCCATTTTAACCACCCATATTCTTTTAATCAGCTTGATTGCTCCGAGTGTTTTCTTCCTTATCTCGCATCTGTAGAGTACAAGTTGATCTGTAGGTCCCTACCAAAGTACCAATCATAGGCTACGTCCGACACATTTTTTGTATCTTTGTATGTGTAAAACATGTCAATGTCATTGAAGTACGACT]
[+] EMBL BU667066             [                                                                                                                                                                                                                                                                                                              CGGGAGCTGCTTGGGGAGCTCAAGGACAGCGGGGAGCCCTCGTCGGGGAGATCCACGCTTTCGGAGGGCAATGGGATCGGATCTGCCGGTGCGGAGCGCGCCAGCCAGGACAGCCTACAGTTCTCATCCCATCATGATGTTGCCATGGACTTGATAAATAGTGTCACTGGAGTTGACGAGGAAGGTCGTTCTCGTCAACGCATTCTTTCCTTTGCTGCCAAAAGATATGTTAGTGCCATCGAAAGAAATCCGGAAGATCCAGATGCATACTATAATTGGGCCCTAGTCCTCCAGGAAAGTGCAGATAATGTGGATCCTGATTCTAGTTCTTCAAAAGATTCATTACTCGAGGAGGCTTGCAAAAAGTACGCTGAAGCTACACGACTCTGCCCAACGCTATATGATGCATATTACAACTGGGCTATTGCTATTGCTGATCGAGCCAAAATGCGTGGACGTACCAAAGAGGCTGAAGAACTCTGGAAGCAGGCTATAATGAATTATGACAAGGCAGTCCAGTTAAATTGGAACAG CCCCAGGCCCTCAACAACTGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]


>consensus_11141#1 CTAGTGGCTCGGCTCGGCTCGCGTCCTCTTCCTCCTCGCATCGCATCGCATCGCATCGCC CAGATCTCCCGCCGAGTTAGATCCTAATCCGAGGAGAGACTCGAGTCATGGAGGATTCTG CGCGGCCGACGCCCGCTGACTCCGGGGAGCTCCCCAACGGCGCGGGGATGGCGGAGGATG CGGTGGTGGCGCCCGACGCGGGGGAGGCTCCGGAGGAGGGGGAGGAATCGGGAATTGCGA ACGATTCGGAGACGAACGCGGCTCTGGGCGCAGAGGGCGAGCCCTCGCGGGCGCTCACCA TGCGGGAGCTGCTTGGGGAGCTCAAGGACAGCGGGGAGCCCTCGTCGGGGAGATCCACGC TTTCGGAGGGCAATGGGATCGGATCTGCCGGTGCGGAGCGCGCCAGCCAGGACAGCCTAC AGTTCTCATCCCATCATGATGTTGCCATGGACTTGATAAATAGTGTCACTGGAGTTGACG AGGAAGGTCGTTCTCGTCAACGCATTCTTTCCTTTGCTGCCAAAAGATATGTTAGTGCCA TCGAAAGAAATCCGGAAGATCCAGATGCATACTATAATTGGGCCCTAGTCCTCCAGGAAA GTGCAGATAATGTGGATCCTGATTCTAGTTCTTCAAAAGATTCATTACTCGAGGAGGCTT GCAAAAAGTACGCTGAAGCTACACGACTCTGCCCAACGCTATATGATGCATATTACAACT GGGCTATTGCTATTGCTGATCGAGCCAAAATGCGTGGACGTACCAAAGAGGCTGAAGAAC TCTGGAAGCAGGCTATAATGAATTATGACAAGGCAGTCCAGTTAAATTGGAACAGCCCCC AGGCCCTCAACAACTGGGGTTTGGGACTACAGGAGCTGAGCGCAATTGTTCCAGCCCGAG ATAAACAAACAATCATAAAAACAGCTATAAGCAAGTTTCGATCTGCAATCCAGTTGCAAT TTGATTTCCACCGGGCTATTTACAATCTTGGAACTGTCCTGTATGGGTTAGCAGAGGATA CAATGAGGTCTGCAGGTCCAGATGTCTCTCCAAATGACTTGTACAGTCAGTCCGCCATTT ATGTCGCAGCTGCTCATGCATTGAAGCCAAATTATTCAGTTTATCGCAGTGCTCTACGTC TGGTTCGATCAATGCTACCTTTACCATATCTAAAAGCTGGGTATCTAACTGCTCCTCCAG CAGACAACACCATTGCACCACATAAACATTGGGAAAGGTCAGAATTTGTCTTAAACCATG AGGGACTCCAGCAGGTCGATGCCTCTGAAAGCCCTTCTAGCAAACCCCTTGGACATATGG GGAGAAGCAAAAAATATATTAAAGTAGCTGTTGAAGATATCGTTTCAGTGTCTGCATGCT CCGATCTAACACTGCCACCTGGTGCTGGCCTTTGTATAGAAACAATTCACGGGCCTTTGT TCTTGGTTGCTGATACCTGGGAGTCTCTTGATGGTTGGTTAGATGCTATACGCTTAGTGT ACACCATATTTGCACGAGGAAAAAGTGATGTATTGGCAGGTATCATTACTGGTTGATCTA TTGTTGTATGTACGAGTGCGTCGAGCAACAGATATGTCCATTTTAACCACCCATATTCTT TTAATCAGCTTGATTGCTCCGAGTGTTTTCTTCCTTATCTCGCATCTGTAGAGTACAAGT TGATCTGTAGGTCCCTACCAAAGTACCAATCATAGGCTACGTCCGACACATTTTTTGTAT CTTTGTATGTGTAAAACATGTCAATGTCATTGAAGTACGACT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11141#0      -TTTTTGCCAAGTCCAACGTCGCGCGAGG---CGAGGCGAGGCGAGGCGAGAGGAGGAGT 56
consensus_11141#1      CTAGTGGCTCGGCTCGGC-TCGCGTCCTCTTCCTCCTCGCATCGCATCGCATCGCATCGC 59
                        *  * **   *  *  * *****        *    **   **   **    *    * 

consensus_11141#0      GGAGACCACCGCCGCCGCGGCGCGCGCGCGCTCGGAGA-----TCTCGCCGCGGTAG-CG 110
consensus_11141#1      CCAGATCTC--CCGCCGAGTTAGATCCTAATCCGAGGAGAGACTCGAGTCATGGAGGATT 117
                         *** * *  ****** *       *     **  **     **  * *  **  *   

consensus_11141#0      CAGCGCGGGTGCCGTGCCCTGATCCGTCCGTGCGATGAAAGAGCCCGCGCAGGTGAGGAC 170
consensus_11141#1      CTGCGCGGCCGACGCCCGCTGACTCCGGGGAGCTCCCCAACGGCGCGGGGATG-GCGGAG 176
                       * ******  * **  * ****  *    * **     **  ** ** * * * * *** 

consensus_11141#0      GGCGCGGGGCGGCGCGGCGGATGGGGTGGAGGTGGGGGTGGAGGAGGAGGAGGAGCCGCC 230
consensus_11141#1      GATGCGGTG----GTGGCGCCCGACGCGGGGGAGGCTCCGGAGGAGGGGGAGGA------ 226
                       *  **** *    * ****   *  * ** ** **    ******** ******      

consensus_11141#0      GCGATCGGCGACGGTGAAGCAGGAGGAGGCGAACGCGGTGCTCGGGGCGGAGGGG----- 285
consensus_11141#1      ---ATCGGGAATTGCGAACGATTCGGAGACGAACGCGGCTCTGGGCGCAGAGGGCGAGCC 283
                          *****  *  * ***  *   **** *********  ** ** ** *****      

consensus_11141#0      -TCCCGCCCGTTCGCCATGCGGGAGCTCAAGGAGGACCACGAGGTCGCGGCCGGGAGC-- 342
consensus_11141#1      CTCGCGGGCGCTCACCATGCGGGAGCTGCTTGGGGAGCTCAAGG--ACAGCGGGGAGCCC 341
                        ** **  ** ** *************    * *** * * ***   * ** ******  

consensus_11141#0      --GGCGTGAAGG-CGGCGTCTGGGGAGAGGAACGGGATCGGATCGGCGGATGCCCAGGGT 399
consensus_11141#1      TCGTCGGGGAGATCCACGCTTTCGGAGGGCAATGGGATCGGATCTGCCGGTGCGGAGCGC 401
                         * ** * **  *  **  *  **** * ** *********** ** * ***  ** * 

consensus_11141#0      TCGTCGTACAGCCAAGAGAGTATGCAGCAGTTTTCATCCCATCATGATGTTGCAATGGAC 459
consensus_11141#1      GC------CAGCCAGGACAGCCTAC---AGTTCTCATCCCATCATGATGTTGCCATGGAC 452
                        *      ****** ** **  * *   **** ******************** ******

consensus_11141#0      TTAATAAATAGTGTCACTGGAGTTGACGAGGAAGGCCGTTCTCGCCAGAGGATTCTTTCT 519
consensus_11141#1      TTGATAAATAGTGTCACTGGAGTTGACGAGGAAGGTCGTTCTCGTCAACGCATTCTTTCC 512
                       ** ******************************** ******** **  * ******** 

consensus_11141#0      TTTGCTGCCAAAAGATACATAAGCGCAATAGAAAGAAATCATGATGACCCTGATGCATAT 579
consensus_11141#1      TTTGCTGCCAAAAGATATGTTAGTGCCATCGAAAGAAATCCGGAAGATCCAGATGCATAC 572
                       *****************  * ** ** ** **********  ** ** ** ******** 

consensus_11141#0      TATAATTGGGCCCTTGTTCTCCAGGAGAGTGCAGACAATGTAGATCCAAATTCTAGTTCG 639
consensus_11141#1      TATAATTGGGCCCTAGTCCTCCAGGAAAGTGCAGATAATGTGGATCCTGATTCTAGTTCT 632
                       ************** ** ******** ******** ***** *****  ********** 

consensus_11141#0      TCCAAAGATGCATTGCTTGAGGAGGCTTGCAAAAAGTATGCTGAAGCTACCCGTCTTTGC 699
consensus_11141#1      TCAAAAGATTCATTACTCGAGGAGGCTTGCAAAAAGTACGCTGAAGCTACACGACTCTGC 692
                       ** ****** **** ** ******************** *********** ** ** ***

consensus_11141#0      CCAACTCTTTATGATGCATATTATAACTGGGCTATCGCTATTGCTGATCGGGCTAAAATG 759
consensus_11141#1      CCAACGCTATATGATGCATATTACAACTGGGCTATTGCTATTGCTGATCGAGCCAAAATG 752
                       ***** ** ************** *********** ************** ** ******

consensus_11141#0      CGAGGTCGTACTAAAGAAGCTGAAGAGCTCTGGAAGCAGGCAATACTGAATTATGAGAAG 819
consensus_11141#1      CGTGGACGTACCAAAGAGGCTGAAGAACTCTGGAAGCAGGCTATAATGAATTATGACAAG 812
                       ** ** ***** ***** ******** ************** *** ********** ***

consensus_11141#0      GCTGTCCAGCTAAATTGGAATAGTCCGCAGGCTCTTAATAATTGGGGTCTTGGACTACAG 879
consensus_11141#1      GCAGTCCAGTTAAATTGGAACAGCCCCCAGGCCCTCAACAACTGGGGTTTGGGACTACAG 872
                       ** ****** ********** ** ** ***** ** ** ** ****** * *********

consensus_11141#0      GAACTGAGTGCAATTGTTCCGGCTCGTGAGAAGCAAACCATCATAAAAACAGCTATAAGT 939
consensus_11141#1      GAGCTGAGCGCAATTGTTCCAGCCCGAGATAAACAAACAATCATAAAAACAGCTATAAGC 932
                       ** ***** *********** ** ** ** ** ***** ******************** 

consensus_11141#0      AAGTTTCGAGCTGCAATTCAACTGCAATTTGATTTCCATCGGGCAATATACAATCTTGGG 999
consensus_11141#1      AAGTTTCGATCTGCAATCCAGTTGCAATTTGATTTCCACCGGGCTATTTACAATCTTGGA 992
                       ********* ******* **  **************** ***** ** *********** 

consensus_11141#0      ACAGTCTTGTATGGTTTAGCTGAGGATACAATGAGGTCTGGGAAGCCAGGTGTGTCCGCT 1059
consensus_11141#1      ACTGTCCTGTATGGGTTAGCAGAGGATACAATGAGGTCTGCAGGTCCAGATGTCTCTCCA 1052
                       ** *** ******* ***** *******************     **** *** **  * 

consensus_11141#0      AGCGAGTTTTACAGTCAGTCTGCTATCTATGTTGCAGCTGCCCATGCACTGAAGCCAAAT 1119
consensus_11141#1      AATGACTTGTACAGTCAGTCCGCCATTTATGTCGCAGCTGCTCATGCATTGAAGCCAAAT 1112
                       *  ** ** *********** ** ** ***** ******** ****** ***********

consensus_11141#0      TACTCGGTCTACCGCAGTGCTTTGCGATTAGTCCGTTCAATGCTGCCTTTGCCATATCTC 1179
consensus_11141#1      TATTCAGTTTATCGCAGTGCTCTACGTCTGGTTCGATCAATGCTACCTTTACCATATCTA 1172
                       ** ** ** ** ********* * **  * ** ** ******** ***** ******** 

consensus_11141#0      AAAGTGGGATATTTGATTGCTCCTCCAGAAAATAGTGCCATTGCACCACACAAAGAATGG 1239
consensus_11141#1      AAAGCTGGGTATCTAACTGCTCCTCCAGCAGACAACACCATTGCACCACATAAACATTGG 1232
                       ****  ** *** * * *********** * * *   ************* *** * ***

consensus_11141#0      GAGAGGTCACAGTTTGTTTTGAACCATGAAGAACTCCAGCAGGTCAATGCCTCTGACCAG 1299
consensus_11141#1      GAAAGGTCAGAATTTGTCTTAAACCATGAGGGACTCCAGCAGGTCGATGCCTCTGAAAGC 1292
                       ** ****** * ***** ** ******** * ************* **********    

consensus_11141#0      CCTCCATCACAATCACCTGGGCATGTGGACAGCGGCAGAAAGCTTTTCAGGATAGTTGTT 1359
consensus_11141#1      CCTTCTAGCAAACCCCTTGGACATATGGGGAGAAGCAAAAAATATATTAAAGTAGCTGTT 1352
                       *** *     ** * * *** *** ***  **  *** ***   * * *   *** ****

consensus_11141#0      GCAGACATTGTTTCTGTGTCAGCATGCGCTGATCTAACCCTGCCACCCGGTGCTGGCCTT 1419
consensus_11141#1      GAAGATATCGTTTCAGTGTCTGCATGCTCCGATCTAACACTGCCACCTGGTGCTGGCCTT 1412
                       * *** ** ***** ***** ****** * ******** ******** ************

consensus_11141#0      CGCATCGATACTATTCATGGCCCTAGATTCTTGGTTGCTGATAACTGGGAGACCATTGAC 1479
consensus_11141#1      TGTATAGAAACAATTCACGGGCCTTTGTTCTTGGTTGCTGATACCTGGGAGTCTCTTGAT 1472
                        * ** ** ** ***** ** ***   **************** ******* *  **** 

consensus_11141#0      AGTTGGCTAGACGCTATACGCCTAGTCTACACCATATTTGCAAGAGGGAGGAGTGATGTC 1539
consensus_11141#1      GGTTGGTTAGATGCTATACGCTTAGTGTACACCATATTTGCACGAGGAAAAAGTGATGTA 1532
                        ***** **** ********* **** *************** **** *  ******** 

consensus_11141#0      CTTGCTGGGATTATTACTGGCTGATGGCTCGCTGCTAGTGAAAAACTGCCAACAAGTATA 1599
consensus_11141#1      TTGGCAGGTATCATTACTGGTTGATCTATTGTTGTATGTACGAGTGCGTCGAGCAACAGA 1592
                        * ** ** ** ******** ****   * * **   **   *    * * *  *  * *

consensus_11141#0      GGCCAAGAGACTGTAGGAGTATGTCCCGG-AATCAGATAGAAGTATCATAGAACTCATGG 1658
consensus_11141#1      TATGTCCATTTTAACCACCCATATTCTTTTAATCAGCTTGATTGCTCCGAGTGTTTTCTT 1652
                              *   *        ** * *    ****** * **    **  **   *     

consensus_11141#0      TTTTAGTAGGCGTA---AGAGCAGATGTT-ATTTGTAACCCATTTATGGACTGGTAGGTC 1714
consensus_11141#1      CCTTATCTCGCATCTGTAGAGTACAAGTTGATCTGTAGGTCCCTACCAAAGTACCAA-TC 1711
                         ***    ** *    **** * * *** ** ****   *  *     * *   *  **

consensus_11141#0      ATAGGCCAATTTTCCTTTGTACTGTGGCGTTGTGTCGTCATGGTACATATGATGTGATAT 1774
consensus_11141#1      ATAGGCTACGTCCGACACATTTTTTGTATCTTTGTATGTGTAAAACATGTCA-ATGTCAT 1770
                       ****** *  *        *  * **    * ***     *   **** * *  **  **

consensus_11141#0      AAGAAATAAAAACCGTAATATCCTCTCTAGCCTGTGAATAAAGATGCAACGGCTTGTGGC 1834
consensus_11141#1      T-GAAGTACGACT----------------------------------------------- 1782
                         *** **  *                                                 

consensus_11141#0      AGGCGAGTAGGTTGTGTGAACTGCTGTCCTATCTCCCTCTCAAAGAAGGAATAAAATGTT 1894
consensus_11141#1      ------------------------------------------------------------
                                                                                   

consensus_11141#0      TCCCCTATCTGTTTTTCAGCCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1954
consensus_11141#1      ------------------------------------------------------------
                                                                                   

consensus_11141#0      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1995
consensus_11141#1      -----------------------------------------
                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)