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Oryza sativa
cluster # 11164 cluster # 11164       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11164#0 length = 1786 sequences # 7  
consensus_11164#1 length = 777 sequences # 1  

consensusID : consensus_11164#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1786
fasta sequence
                              [GCCCTACCTGTCTCCGCTCCTCCTCCGGCACCGCCGGCGGCGGCGGCGGCGGCGGCGCTGCCTAGCAAGTAGAATACCAAGATACGGCACAGAAGAGCGATGAGGAGCCGCAGCCCCAGCAAGAGGAGAAGGCATGGCAGCAGGGGAAGAAGCCCTCCAAGCTCACGACATGGCTGTGCCAAGGATAAGGAAGGTGCTGCTGTAAGCCTCTTCGTCAGCAACCTTCCGCGAAGCTGCAGACCTGAGGATGTCCAAGTTCCATTTCAAAAGTTTGGTCCTGTTCGGGATGTTTATCTGCCAAAAGACTACAACACTGGGGAGCCAAGAGGATTTGCATTTGTGGAGTTTGCTCACTCTTCTGATGCTTCTAAAGCGCGATATCACATGAACCGTAAGATGCTTTCTGGACGTGAGATCAGTGTTGCTTTTGCTGTGCAGACACGGAAAAGGCCCGAGGAAATGCGAAGAATAATTGGAGCCAGGCATAATTCCCCACAGAGAAAGGAAGAGTGCCGAACAAACTCTCCAGGACAGCCTAAAGGACATGATGAGAAGCGGAAGCGCAGATCCTATACTCCCAAATATAAGGATCGGCAGTATGCTGACATTGGTCGTGATGAGACGCCGCCTGCACCTGATAGTGAGCGACCCTGGGCTCTGTGCAGGTCACCCAGGCCATCCCCTCCAGGGCAATCTCATTCTCGCTCATACTCACGTTCCCATTCTCTTCATCTCCATGACCATGCTAGAACACGGTCATGCTCTCCTGCCCCAGGAAGGCAAGATGACCAGTATGCTTCCCCGCAGAGGAAGGAGCACCAAACAAAATCATCAGGACAGACAAAAGGACATGATGATATGCGCAGATCCTATACTCCTGAATATAATGAATGCCAGGATGCTGACAATGGTTTTGATGAGACACCTCCGGCACCTGATGGTGAGCGATCCTCTGTGCTGGGCAGGTCACCCCGGCCATCCCCTCCAGGACGGTCTCATTGTCATTCACACTCACGTTCCCGCTCTCCTGAACTCCGTGGCCATGCTAGATCACGGTCATGCTCTCCTGCCACAGGAAGGCAAGATAACCAGTCTACTTCCCCACAGAGAAGGGAGAAGCACCAAACAAAATCATCAGGACAGGCTAAAGAACATGATGAGAAGCGCAGATCCTATACTCCTGAATA-TAATGATC-GCCGGGATGCTG-ACAATGGTTATGATCAGACGCCGCC-GGCA-CCTGAT-GGTGAGC-GATCCTGGGCA-CTGGGCAGGTCACCCCAGCCATCCCCTCCAGGACGGTCTCATTTTC-ATTCACACTCGCGTTCCCGCTCTCCTGAACTCCGTGGCCGTGCTAGATCTCGGTCATGCTCTCCTGCCCCCGGAAGGCAAGGAGATGACCAGTATGCTTCCCCACAGAGAAAGGAGGAGCAGCAAACAAAATCATCACGACAGACTAAAGAACATGATGAGGAGCGAAGATCCTGCACTCCTGAATATAGCGATCGCCGTGATGCTTTCATCGGTCATGATGAGACACCGCCGTCAGCCGAATGGGGGAGTAAACTGGGCA-CTGTGCAGGTTATCTCCAACACCGCCGCCAGCAGCAACTAGACTCTTCTGTTTATAGCTAGACTAGATTGAAGGTGCGCTCAATATTTATGTCTTATCTCTTGTACATGTTGCGTGCATTTGGATTGATTATTCACACATAGAGTATACATAGCAGCAAAATGAGGGATGGTCGACGATGAACGTTTCTTGTTAAATTCNATAGTACTCCCGTATGATA]

[+] EMBL CB637182             [GCCCTACCTGTCTCCGCTCCTCCTCCGGCACCGCCGGCGGCGGCGGCGGCGGCGGCGCTGCCTAGCAAGTAGAATACCAAGATACGGCACAGAAGAGCGATGAGGAGCCGCAGCCCCAGCAAGAGGAGAAGGCATGGCAGCAGGGGAAGAAGCCCTCCAAGCTCACGACATGGCTGTGCCAAGGATAAGGAAGGTGCTGCTGTAAGCCTCTTCGTCAGCAACCTTCCGCGAAGCTGCAGACCTGAGGATGTCCAAGTTCCATTTCAAAAGTTTGGTCCTGTTCGGGATGTTTATCTGCCAAAAGACTACAACACTGGGGAGCCAAGAGGATTTGCATTTGTGGAGTTTGCTCACTCTTCTGATGCTTCTAAAGCGCGATATCACATGAACCGTAAGATGCTTTCTGGACGTGAGATCAGTGTTGCTTTTGCTGTGCAGACACGGAAAAGGCCCGAGGAAATGCGAAGAATAATTGGAGCCAGGCATAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK102518             [        TGTCTCCGCTCCTCCTCCGGCACCGCCGGCGGCGGCGGCGGCGGCGGCGCTGCCTAGCAAGTAGAATACCAAGATACGGCACAGAAGAGCGATGAGGAGCCGCAGCCCCAGCAAGAGGAGAAGGCATGGCAGCAGGGGAAGAAGCCCTCCAAGCTCACGACATGGCTGTGCCAAGGATAAGGAAGGTGCTGCTGTAAGCCTCTTCGTCAGCAACCTTCCGCGAAGCTGCAGACCTGAGGATGTCCAAGTTCCATTTCAAAAGTTTGGTCCTGTTCGGGATGTTTATCTGCCAAAAGACTACAACACTGGGGAGCCAAGAGGATTTGCATTTGTGGAGTTTGCTCACTCTTCTGATGCTTCTAAAGCGCGATATCACATGAACCGTAAGATGCTTTCTGGACGTGAGATCAGTGTTGCTTTTGCTGTGCAGACACGGAAAAGGCCCGAGGAAATGCGAAGAATAATTGGAGCCAGGCATAATTCCCCACAGAGAAAGGAAGAGTGCCGAACAAACTCTCCAGGACAGCCTAAAGGACATGATGAGAAGCGGAAGCGCAGATCCTATACTCCCAAATATAAGGATCGGCAGTATGCTGACATTGGTCGTGATGAGACGCCGCCTGCACCTGATAGTGAGCGACCCTGGGCTCTGTGCAGGTCACCCAGGCCATCCCCTCCAGGGCAATCTCATTCTCGCTCATACTCACGTTCCCATTCTCTTCATCTCCATGACCATGCTAGAACACGGTCATGCTCTCCTGCCCCAGGAAGGCAAGATGACCAGTATGCTTCCCCGCAGAGGAAGGAGCACCAAACAAAATCATCAGGACAGACAAAAGGACATGATGATATGCGCAGATCCTATACTCCTGAATATAATGAATGCCAGGATGCTGACAATGGTTTTGATGAGACACCTCCGGCACCTGATGGTGAGCGATCCTCTGTGCTGGGCAGGTCACCCCGGCCATCCCCTCCAGGACGGTCTCATTGTCATTCACACTCACGTTCCCGCTCTCCTGAACTCCGTGGCCATGCTAGATCACGGTCATGCTCTCCTGCCACAGGAAGGCAAGATAACCAGTCTACTTCCCCACAGAGAAGGGAGAAGCACCAAACAAAATCATCAGGACAGGCTAAAGAACATGATGAGAAGCGCAGATCCTATACTCCTGAATA TAATGATC GCCGGGATGCTG ACAATGGTTATGATCAGACGCCGCC GGCA CCTGAT GGTGAGC GATCCTGGGCA CTGGGCAGGTCACCCCAGCCATCCCCTCCAGGACGGTCTCATTTTC ATTCACACTCGCGTTCCCGCTCTCCTGAACTCCGTGGCCGTGCTAGATCTCGGTCATGCTCTCCTGCCCCCGGAAGGCAAGGAGATGACCAGTATGCTTCCCCACAGAGAAAGGAGGAGCAGCAAACAAAATCATCACGACAGACTAAAGAACATGATGAGGAGCGAAGATCCTGCACTCCTGAATATAGCGATCGCCGTGATGCTTTCATCGGTCATGATGAGACACCGCCGTCAGCCGAATGGGGGAGTAAACTGGGCA CTGTGCAGGTTATCTCCAACACCGCCGCCAGCAGCAACTAGACTCTTCTGTTTATAGCTAGACTAGATTGAAGGTGCGCTCAATATTTATGTCTTATCTCTTGTACATGTTGCGTGCATTTGGATTGATTATTCACACATAGAGTATACATAGCAGCAAAATGAGGGATGGTCGACGATGAACGTTTCT                              ]
[+] EMBL CB638363             [                CTCCTCCTCCGGCACCGCCGGCGGCGGCGGCGGCGGCGGCGCTGCCTAGCAAGTAGAATACCAAGATACGGCACAGAAGAGCGATGAGGAGCCGCAGCCCCAGCAAGAGGAGAAGGCATGGCAGCAGGGGAAGAAGCCCTCCAAGCTCACGACATGGCTGTGCCAAGGATAAGGAAGGTGCTGCTGTAAGCCTCTTCGTCAGCAACCTTCCGCGAAGCTGCAGACCTGAGGATGTCCAAGTTCCATTTCAAAAGTTTGGTCCTGTTCGGGATGTTTATCTGCCAAAAGACTACAACACTGGGGAGCCAAGAGGATTTGCATTTGTGGAGTTTGCTCACTCTTCTGATGCTTCTAAAGCGCGATATCACATGAACCGTAAGATGCTTTCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB656402             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCCTCCAGGACGGTCTCATTGTCATTCACACTCACGTTCCCGCTCTCCTGAACTCCGTGGCCATGCTAGATCACGGTCATGCTCTCCTGCCACAGGAAGGCAAGATAACCAGTCTACTTCCCCACAGAGAAGGGAGAAGCACCAAACAAAATCATCAGGACAGGCTAAAGAACATGATGAGAAGCGCAGATCCTATACTCCTGAATA TAATGATC GCCGGGATGCTG ACAATGGTTATGATCAGACGCCGCC GGCA CCTGAT GGTGAGC GATCCTGGGCA CTGGGCAGGTCACCCCAGCCATCCCCTCCAGGACGGTCTCATTTTC ATTCACACTCGCGTTCCCGCTCTCCTGAACTCCGTGGCCGTGCTAGATCTCGGTCATGCTCTCCTGCCCCCGGAAGGCAAGGAGATGACCAGTATGCTTCCCCCCAGAGAAAGTAGGAGCAGCAAACAAAATCATCACGACAGACTAAAGAACATGATGAGGAGCGAAGATCCTGCACTCCTGAATATAGCGATCGCCGTGATGCTTTCATCGGTCATGATGAGACACCGCCGTCAGCCGAATGGGGGAGTAAACTGGGCA CTGTGCAGGTTATCTCCAACACCGCCGCCAGCAGCAACTAGACTCTTCTGTTTATAGCTAGACTAGATTGAAGGTGCGCTCAATATTTATGTCTTATCTCTTGTACATGTTGCGTGCATTTGGATTGATTATTCACACATAGAGTATAGGTAGCAGCAAAATGA                                                       ]
[+] EMBL BI804894             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       agaccccaAGATCCTATACTCCTGAATATTAATG TCTCCCGGGATTCTGAACAAT GTTATGATCAGAC CCGCCGGGCACCCTGATGGGTGAGCAGATCCTGGGCA CTGGGCAGGTCACCCCAGCCATCCCCTCCAGGACGGTCTCATTTTCAATTCACACTCGCGTTCCCGCTCTCCTGAACTCCGT GCCGTGCTAGATCTCGGTCATGCTCTCCTGCCCCCGGAAGGCAAGGAGATGACCAGTATGCTTCCCCACAGAGAAAGGAGGAGCAAC AAC AAATCATCACGACAGACTAAAGAACATGATGAGGAGCGAAGATCCTGCACTCCTGAATATAGCGATC CCGTGATGCTTTCATCGGTCATGATGAGACACCGCCGTCAGCCGAATGGGGGAGTAAACTGGGCA CTGTGCAGGTTATCTCCAACACCGCCGCCAGCAGCAACTAGACTCTTCTGTTTATAGCTAGACTAGATTGAAGGTGCGCTCAATATTTATGTCTTATCTCTTGTACATGTTGCGTGCATTTGGATTGATTATTCACACATAGAGTATACATAGCAGC AAATGAGGGATGGTCGACGATGAAaaaaaaaa                             ]
[+] EMBL BI806613             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGATCAGAC CC CC  GCA CCTGAT GGTGA C GATCCT GGCACCTGGGCA GTCACCCCAGCCATCCCCT CAGGACGGTCTCATTTTC ATTCACACTCGCGTTCCCGCTCTCCTGAACTCCGT GCCGTGCTAGATCTCGGTCATGCTCTCCTGCCCCCGGAAGGCAAGGAGATGACCAGTATGCTTCCCC CAGAGAAAGGAGGAGCA C AACCAAATCATCACGACAGACTAAAGAACATGATGAGGAGCGAAGATCCTGCACTCCTGAATATAGCGATC CCGTGATGCTTTCATCGGTCATGATGAGACACCGCCGTCAGCCGAATGGGGGAGTAAACTGGGCACCTGT CAGGTTATCTCCAACACCGCCGCCAGCAGCAACTAGACTCTTCTGTTTATAGCTAGACTAGATTGAAGGTGCGCTC ATATTTATGTCTTATCTCTTGTACATGTTGCGTGCATTTGGATTGATTATTCACACATAGAGTATACATA CA C AAATGAGGGATGGTCGACGATGAACGTTTCTTGTTAAA                       ]
[-] EMBL CB638364             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CACACTCGCGTTCCCGCTCTCATGAACTCCGTGGCCGTGCTAGATCTCGGTCATGCTCTCCTGCCCCCGGAAGGCAAGGAGATGACCAGTATGCTTCCCCACAGAGAAAGGAGGAGCAGCAAACAAAATCATCACGACAGACTAAAGAACATGATGAGGAGCGAAGATCCTGCACTCCTGAATATAGCGATCGCCGTGATGCTTTCATCGGTCATGATGAGACACCGCCGTCAGCCGAATGGGGGAGTAAACTGGGCA CTGTGCAGGTTATCTCCAACACCGCCGCCAGCAGCAACTAGACTCTTCTGTTTATAGCTAGACTAGATTGAAGGTGCGCTCAATATTTATGTCTTATCTCTTGTACATGTTGCGTGCATTTGGATTGATTATTCACACATAGAGTATACATAGCAGCAAAATGAGGGATGGTCGACGATGAACGTTTCTTGTATATTTCNATAGTACTCCCGTATGATA]


>consensus_11164#0 GCCCTACCTGTCTCCGCTCCTCCTCCGGCACCGCCGGCGGCGGCGGCGGCGGCGGCGCTG CCTAGCAAGTAGAATACCAAGATACGGCACAGAAGAGCGATGAGGAGCCGCAGCCCCAGC AAGAGGAGAAGGCATGGCAGCAGGGGAAGAAGCCCTCCAAGCTCACGACATGGCTGTGCC AAGGATAAGGAAGGTGCTGCTGTAAGCCTCTTCGTCAGCAACCTTCCGCGAAGCTGCAGA CCTGAGGATGTCCAAGTTCCATTTCAAAAGTTTGGTCCTGTTCGGGATGTTTATCTGCCA AAAGACTACAACACTGGGGAGCCAAGAGGATTTGCATTTGTGGAGTTTGCTCACTCTTCT GATGCTTCTAAAGCGCGATATCACATGAACCGTAAGATGCTTTCTGGACGTGAGATCAGT GTTGCTTTTGCTGTGCAGACACGGAAAAGGCCCGAGGAAATGCGAAGAATAATTGGAGCC AGGCATAATTCCCCACAGAGAAAGGAAGAGTGCCGAACAAACTCTCCAGGACAGCCTAAA GGACATGATGAGAAGCGGAAGCGCAGATCCTATACTCCCAAATATAAGGATCGGCAGTAT GCTGACATTGGTCGTGATGAGACGCCGCCTGCACCTGATAGTGAGCGACCCTGGGCTCTG TGCAGGTCACCCAGGCCATCCCCTCCAGGGCAATCTCATTCTCGCTCATACTCACGTTCC CATTCTCTTCATCTCCATGACCATGCTAGAACACGGTCATGCTCTCCTGCCCCAGGAAGG CAAGATGACCAGTATGCTTCCCCGCAGAGGAAGGAGCACCAAACAAAATCATCAGGACAG ACAAAAGGACATGATGATATGCGCAGATCCTATACTCCTGAATATAATGAATGCCAGGAT GCTGACAATGGTTTTGATGAGACACCTCCGGCACCTGATGGTGAGCGATCCTCTGTGCTG GGCAGGTCACCCCGGCCATCCCCTCCAGGACGGTCTCATTGTCATTCACACTCACGTTCC CGCTCTCCTGAACTCCGTGGCCATGCTAGATCACGGTCATGCTCTCCTGCCACAGGAAGG CAAGATAACCAGTCTACTTCCCCACAGAGAAGGGAGAAGCACCAAACAAAATCATCAGGA CAGGCTAAAGAACATGATGAGAAGCGCAGATCCTATACTCCTGAATATAATGATCGCCGG GATGCTGACAATGGTTATGATCAGACGCCGCCGGCACCTGATGGTGAGCGATCCTGGGCA CTGGGCAGGTCACCCCAGCCATCCCCTCCAGGACGGTCTCATTTTCATTCACACTCGCGT TCCCGCTCTCCTGAACTCCGTGGCCGTGCTAGATCTCGGTCATGCTCTCCTGCCCCCGGA AGGCAAGGAGATGACCAGTATGCTTCCCCACAGAGAAAGGAGGAGCAGCAAACAAAATCA TCACGACAGACTAAAGAACATGATGAGGAGCGAAGATCCTGCACTCCTGAATATAGCGAT CGCCGTGATGCTTTCATCGGTCATGATGAGACACCGCCGTCAGCCGAATGGGGGAGTAAA CTGGGCACTGTGCAGGTTATCTCCAACACCGCCGCCAGCAGCAACTAGACTCTTCTGTTT ATAGCTAGACTAGATTGAAGGTGCGCTCAATATTTATGTCTTATCTCTTGTACATGTTGC GTGCATTTGGATTGATTATTCACACATAGAGTATACATAGCAGCAAAATGAGGGATGGTC GACGATGAACGTTTCTTGTTAAATTCNATAGTACTCCCGTATGATA



consensusID : consensus_11164#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 777
fasta sequence
                              [ATCTCTTAAATCCATTTCAAAAGTTTGGTCCTGTTCGGGATGTTTATCTGCCAAAAGACTACAACACTGGGGAGCCAAGAGGATTTGCATTTGTGGAGTTTGCTCACTCTTCTGATGCTTCTAAAGCGCGATATCACATGAACCGTAAGATGCTTTCTGGACGTGAGATCAGTGTTGCTTTTGCTGTGCAGACACGGAAAAGGCCCGAGGAAATGCGAAGAATAATTGGAGCCAGGCATAATTCCCCACAGAGAAAGGAAGAGTGCCGAACAAACTCTCCAGGACAGCCTAAAGGACATGATGAGAAGCGGAAGCGCAGATCCTATACTCCCAAATATAAGGATCGGCAGTATGCTGACATTGGTCGTGATGAGACGCCGCCTGCACCTGATAGTGAGCGACCCTGGGCTCTGTGCAGGTCACCCAGGCCATCCCCTCCAGGGCAATCTCATTCTCGCTCATACTCACGTTCCCATTCTCTTCATCTCCATGACCATGCTAGAACACGGTCATGCTCTCCTGCCCCAGGAAGGCAAGATGACCAGTATGCTTCCCCGCAGAGGAAGGAGCACCAAACAAAATCATCAGGACAGACAAAAGGACATGATGATATGCGCAGATCCTATACTCCTGAATATAATGAATGCCAGGATGCTGACAATGGTTTTGATGAGACACCTCCGGCACCTGATGGTGAGCGATCCTCTGTGCTGGGCANGTCACCCCGGCCATCCCCTCCAGGACGGTCTCATTGTCATTCACACTCACGTTCCCGCT]

[+] EMBL CB656401             [ATCTCTTAAATCCATTTCAAAAGTTTGGTCCTGTTCGGGATGTTTATCTGCCAAAAGACTACAACACTGGGGAGCCAAGAGGATTTGCATTTGTGGAGTTTGCTCACTCTTCTGATGCTTCTAAAGCGCGATATCACATGAACCGTAAGATGCTTTCTGGACGTGAGATCAGTGTTGCTTTTGCTGTGCAGACACGGAAAAGGCCCGAGGAAATGCGAAGAATAATTGGAGCCAGGCATAATTCCCCACAGAGAAAGGAAGAGTGCCGAACAAACTCTCCAGGACAGCCTAAAGGACATGATGAGAAGCGGAAGCGCAGATCCTATACTCCCAAATATAAGGATCGGCAGTATGCTGACATTGGTCGTGATGAGACGCCGCCTGCACCTGATAGTGAGCGACCCTGGGCTCTGTGCAGGTCACCCAGGCCATCCCCTCCAGGGCAATCTCATTCTCGCTCATACTCACGTTCCCATTCTCTTCATCTCCATGACCATGCTAGAACACGGTCATGCTCTCCTGCCCCAGGAAGGCAAGATGACCAGTATGCTTCCCCGCAGAGGAAGGAGCACCAAACAAAATCATCAGGACAGACAAAAGGACATGATGATATGCGCAGATCCTATACTCCTGAATATAATGAATGCCAGGATGCTGACAATGGTTTTGATGAGACACCTCCGGCACCTGATGGTGAGCGATCCTCTGTGCTGGGCANGTCACCCCGGCCATCCCCTCCAGGACGGTCTCATTGTCATTCACACTCACGTTCCCGCT]


>consensus_11164#1 ATCTCTTAAATCCATTTCAAAAGTTTGGTCCTGTTCGGGATGTTTATCTGCCAAAAGACT ACAACACTGGGGAGCCAAGAGGATTTGCATTTGTGGAGTTTGCTCACTCTTCTGATGCTT CTAAAGCGCGATATCACATGAACCGTAAGATGCTTTCTGGACGTGAGATCAGTGTTGCTT TTGCTGTGCAGACACGGAAAAGGCCCGAGGAAATGCGAAGAATAATTGGAGCCAGGCATA ATTCCCCACAGAGAAAGGAAGAGTGCCGAACAAACTCTCCAGGACAGCCTAAAGGACATG ATGAGAAGCGGAAGCGCAGATCCTATACTCCCAAATATAAGGATCGGCAGTATGCTGACA TTGGTCGTGATGAGACGCCGCCTGCACCTGATAGTGAGCGACCCTGGGCTCTGTGCAGGT CACCCAGGCCATCCCCTCCAGGGCAATCTCATTCTCGCTCATACTCACGTTCCCATTCTC TTCATCTCCATGACCATGCTAGAACACGGTCATGCTCTCCTGCCCCAGGAAGGCAAGATG ACCAGTATGCTTCCCCGCAGAGGAAGGAGCACCAAACAAAATCATCAGGACAGACAAAAG GACATGATGATATGCGCAGATCCTATACTCCTGAATATAATGAATGCCAGGATGCTGACA ATGGTTTTGATGAGACACCTCCGGCACCTGATGGTGAGCGATCCTCTGTGCTGGGCANGT CACCCCGGCCATCCCCTCCAGGACGGTCTCATTGTCATTCACACTCACGTTCCCGCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11164#0      GCCCTACCTGTCTCCGCTCCTCCTCCGGCACCGCCGGCGGCGGCGGCGGCGGCGGCGCTG 60
consensus_11164#1      ------------------------------------------------------------
                                                                                   

consensus_11164#0      CCTAGCAAGTAGAATACCAAGATACGGCACAGAAGAGCGATGAGGAGCCGCAGCCCCAGC 120
consensus_11164#1      ------------------------------------------------------------
                                                                                   

consensus_11164#0      AAGAGGAGAAGGCATGGCAGCAGGGGAAGAAGCCCTCCAAGCTCACGACATGGCTGTGCC 180
consensus_11164#1      ------------------------------------------------------------
                                                                                   

consensus_11164#0      AAGGATAAGGAAGGTGCTGCTGTAAGCCTCTTCGTCAGCAACCTTCCGCGAAGCTGCAGA 240
consensus_11164#1      ------------------------------------------------------------
                                                                                   

consensus_11164#0      CCTGAGGATGTCCAAGTTCCATTTCAAAAGTTTGGTCCTGTTCGGGATGTTTATCTGCCA 300
consensus_11164#1      -------ATCTCTTAAATCCATTTCAAAAGTTTGGTCCTGTTCGGGATGTTTATCTGCCA 53
                              ** **  *  *******************************************

consensus_11164#0      AAAGACTACAACACTGGGGAGCCAAGAGGATTTGCATTTGTGGAGTTTGCTCACTCTTCT 360
consensus_11164#1      AAAGACTACAACACTGGGGAGCCAAGAGGATTTGCATTTGTGGAGTTTGCTCACTCTTCT 113
                       ************************************************************

consensus_11164#0      GATGCTTCTAAAGCGCGATATCACATGAACCGTAAGATGCTTTCTGGACGTGAGATCAGT 420
consensus_11164#1      GATGCTTCTAAAGCGCGATATCACATGAACCGTAAGATGCTTTCTGGACGTGAGATCAGT 173
                       ************************************************************

consensus_11164#0      GTTGCTTTTGCTGTGCAGACACGGAAAAGGCCCGAGGAAATGCGAAGAATAATTGGAGCC 480
consensus_11164#1      GTTGCTTTTGCTGTGCAGACACGGAAAAGGCCCGAGGAAATGCGAAGAATAATTGGAGCC 233
                       ************************************************************

consensus_11164#0      AGGCATAATTCCCCACAGAGAAAGGAAGAGTGCCGAACAAACTCTCCAGGACAGCCTAAA 540
consensus_11164#1      AGGCATAATTCCCCACAGAGAAAGGAAGAGTGCCGAACAAACTCTCCAGGACAGCCTAAA 293
                       ************************************************************

consensus_11164#0      GGACATGATGAGAAGCGGAAGCGCAGATCCTATACTCCCAAATATAAGGATCGGCAGTAT 600
consensus_11164#1      GGACATGATGAGAAGCGGAAGCGCAGATCCTATACTCCCAAATATAAGGATCGGCAGTAT 353
                       ************************************************************

consensus_11164#0      GCTGACATTGGTCGTGATGAGACGCCGCCTGCACCTGATAGTGAGCGACCCTGGGCTCTG 660
consensus_11164#1      GCTGACATTGGTCGTGATGAGACGCCGCCTGCACCTGATAGTGAGCGACCCTGGGCTCTG 413
                       ************************************************************

consensus_11164#0      TGCAGGTCACCCAGGCCATCCCCTCCAGGGCAATCTCATTCTCGCTCATACTCACGTTCC 720
consensus_11164#1      TGCAGGTCACCCAGGCCATCCCCTCCAGGGCAATCTCATTCTCGCTCATACTCACGTTCC 473
                       ************************************************************

consensus_11164#0      CATTCTCTTCATCTCCATGACCATGCTAGAACACGGTCATGCTCTCCTGCCCCAGGAAGG 780
consensus_11164#1      CATTCTCTTCATCTCCATGACCATGCTAGAACACGGTCATGCTCTCCTGCCCCAGGAAGG 533
                       ************************************************************

consensus_11164#0      CAAGATGACCAGTATGCTTCCCCGCAGAGGAAGGAGCACCAAACAAAATCATCAGGACAG 840
consensus_11164#1      CAAGATGACCAGTATGCTTCCCCGCAGAGGAAGGAGCACCAAACAAAATCATCAGGACAG 593
                       ************************************************************

consensus_11164#0      ACAAAAGGACATGATGATATGCGCAGATCCTATACTCCTGAATATAATGAATGCCAGGAT 900
consensus_11164#1      ACAAAAGGACATGATGATATGCGCAGATCCTATACTCCTGAATATAATGAATGCCAGGAT 653
                       ************************************************************

consensus_11164#0      GCTGACAATGGTTTTGATGAGACACCTCCGGCACCTGATGGTGAGCGATCCTCTGTGCTG 960
consensus_11164#1      GCTGACAATGGTTTTGATGAGACACCTCCGGCACCTGATGGTGAGCGATCCTCTGTGCTG 713
                       ************************************************************

consensus_11164#0      GGCAGGTCACCCCGGCCATCCCCTCCAGGACGGTCTCATTGTCATTCACACTCACGTTCC 1020
consensus_11164#1      GGCANGTCACCCCGGCCATCCCCTCCAGGACGGTCTCATTGTCATTCACACTCACGTTCC 773
                       **** *******************************************************

consensus_11164#0      CGCTCTCCTGAACTCCGTGGCCATGCTAGATCACGGTCATGCTCTCCTGCCACAGGAAGG 1080
consensus_11164#1      CGCT-------------------------------------------------------- 777
                       ****                                                        

consensus_11164#0      CAAGATAACCAGTCTACTTCCCCACAGAGAAGGGAGAAGCACCAAACAAAATCATCAGGA 1140
consensus_11164#1      ------------------------------------------------------------
                                                                                   

consensus_11164#0      CAGGCTAAAGAACATGATGAGAAGCGCAGATCCTATACTCCTGAATATAATGATCGCCGG 1200
consensus_11164#1      ------------------------------------------------------------
                                                                                   

consensus_11164#0      GATGCTGACAATGGTTATGATCAGACGCCGCCGGCACCTGATGGTGAGCGATCCTGGGCA 1260
consensus_11164#1      ------------------------------------------------------------
                                                                                   

consensus_11164#0      CTGGGCAGGTCACCCCAGCCATCCCCTCCAGGACGGTCTCATTTTCATTCACACTCGCGT 1320
consensus_11164#1      ------------------------------------------------------------
                                                                                   

consensus_11164#0      TCCCGCTCTCCTGAACTCCGTGGCCGTGCTAGATCTCGGTCATGCTCTCCTGCCCCCGGA 1380
consensus_11164#1      ------------------------------------------------------------
                                                                                   

consensus_11164#0      AGGCAAGGAGATGACCAGTATGCTTCCCCACAGAGAAAGGAGGAGCAGCAAACAAAATCA 1440
consensus_11164#1      ------------------------------------------------------------
                                                                                   

consensus_11164#0      TCACGACAGACTAAAGAACATGATGAGGAGCGAAGATCCTGCACTCCTGAATATAGCGAT 1500
consensus_11164#1      ------------------------------------------------------------
                                                                                   

consensus_11164#0      CGCCGTGATGCTTTCATCGGTCATGATGAGACACCGCCGTCAGCCGAATGGGGGAGTAAA 1560
consensus_11164#1      ------------------------------------------------------------
                                                                                   

consensus_11164#0      CTGGGCACTGTGCAGGTTATCTCCAACACCGCCGCCAGCAGCAACTAGACTCTTCTGTTT 1620
consensus_11164#1      ------------------------------------------------------------
                                                                                   

consensus_11164#0      ATAGCTAGACTAGATTGAAGGTGCGCTCAATATTTATGTCTTATCTCTTGTACATGTTGC 1680
consensus_11164#1      ------------------------------------------------------------
                                                                                   

consensus_11164#0      GTGCATTTGGATTGATTATTCACACATAGAGTATACATAGCAGCAAAATGAGGGATGGTC 1740
consensus_11164#1      ------------------------------------------------------------
                                                                                   

consensus_11164#0      GACGATGAACGTTTCTTGTTAAATTCNATAGTACTCCCGTATGATA 1786
consensus_11164#1      ----------------------------------------------
                                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)