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Oryza sativa
cluster # 11175 cluster # 11175       Sequences # 8       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11175#0 length = 2639 sequences # 7  
 consensus_11175#1 length = 795 sequences # 1  
consensusID : consensus_11175#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2639
fasta sequence 
                              [CACGACCGCCGCGAGTAGAGCAAGTAAGCTCGCACCGCACCGAAACCGCAGTGCGTTCTCCTTTTCTAGTGTTCGCCCGCCGCCATCCACACGCCGTGCCGCAGATCCTATCTCCCGTCCGCGGCGGCCGAAGCAATCGGACGAATTCGTCCCCCCCTGCTTCGCCTCCTCTTCGCTGTGTAGTTTGTGAGCGATGCGAGCGGATCGTCTGATGGCGGAGGGGGGCAAGCGGATCGACCTGGGGGCGCCGCTCCGGTCGGTGCGCCACGCCGACGCGCTGCCCTACCACAAGGCCGACCTCAACTCCGGCCCCGTCCGCCACCCCGGCGCGGTGCCCTTCGTCTGGGAGCAGCGGCCCGGGCAGCCAAAGAGCGTCCGCACCCGCCGCGCGCCGCCGTCGCCCACGACCGCGTCCCATCCTCAGCCGCTGGAGCACGGCGTGGAGGATGAGATCGACGGGAGCCCATACCACGACGCCCTCGGGGAGCACTATGTGGGGATACTCCATGGCGTGGACGCGTCCCCCGCCTGTTCCCGGACTGGCGCTCCGGCGCCGGCGCCGGCGCGTGATGAGAAGAGGGCGCAGGTGGCGGAGGCGGCGGTGTTACAGGCGAAGAAGGAAGTGACGGAGAAGCAGGTGGTGTCCGTGGCGGCGGTACTGCGGAAGGGAGATGACGACGACGACGATGAGGAGAGGTTCTCGGACGCGCTCGACACGCTCTCCAGGACGGAGTCCTTCACCGTGAACTGCAGCGTCAGCGGCCTCAGCGGCATGCCAGAGCCCACCTCCCGTGCCGCCGCCGGCGCCGAGGCAGGCGTACGCGGCATCATGATGGATAGATTCCTCCCGGCTGCGCAGGCGGTGGCCATAGGCTCCCCGCAGTACACCTTCCGGAAGGCCGGGGCAGCCAGCGCCACGAGCAATTCTGGCCGCGAGCTTGCGCGTGCAGCTGGGTCTAACGCGAGTGGAAGCAGTGGCGATGATCCCGGGAGGAGGACGCCCGTCCAGCTCCCCTACCAGCATTTGCCTCCCAATTATTTGTCTTGCAGCTATCCCAGACGTGAGGAGCAGGAAGATGAAGACGACGACGATGACTATGATGTGCATAGCACCCGGGGTTTTGCCTCCAAGGGATGTGGCTTGCTCCCTAGTCTCTGTGTGAAGGGTTCATTGTTACTTCTGAATCCAATGCCTGCGATGAAGCGTGGCAAGCCGCGGGGGAATGGGAGAGTCCGGGAGTTCGCATCCAAAGGCAGGGGACGAGGGGCGCCGAGTCCGCTTGCCCGGAGCTCACAAAACAAGCATCTTGGGTGTGCTTCCAACGGGTCCTGGGAGGATGTATACAAGCACAAATTAGAGCAGAAGTATGTTCGTCCAGGAGAGGATGGGAGGGGCAAGCTGACAAGTGAATCAAACCAGCTGACGTTCTGGAGTGACTCGCAGGCGGGCAATGGGTCTTCACCATTCCATCATTCCGCAGGTGGTGGTATGTCTCCCTATTACAGGGATGTTGTCCTGTCATCATCGAGTAAGGCAGATGAGTCTTTTGGAACAGGGGTAAAAGAAGACAAAATGAGTAGTAGTAATGGTTCCAGCTCACTTGGAAGAGACCATGATCGTGGTTCATTGCTTGGATCAGACCGCAGTAGTTTAAAGGGGTCAAGCTCCATTAGCTCAGGGCTGGATAGACCAGTGCATGTAGAATCAATGGATCACCGTGGAGATATTGACTCAGAAACTAGCCACTCGGTTCTGTTACTGGATTCAAGGACATCACTGGATGCTGGTGGGTGTGGCTCTCAGCTTGGAGAACAGATTGTCGGGAAAAACCCTATTGGGAAAGGTGAAGATAATGATCCATTGACAGAAAGGGTCTCTGAAGTTACAGAATGCACGTTGTTAGCACCTTCTGAAAAGTTAAGATCAGTGAATTTGGATGATGGGAAAACTTCTGGTCATCTGGAAGATAGTAGTGTTTCCAAAAGGGATATGCCTTTGCAATCTCTACTCCCATTACCAGTCCCAAGATCACCTTCAGAATCTTGGCTTTCTCGCACTTTACCATCCGTAACAAGCAAACCACCAGTGCCATCTTTTCTTGGAATTCAATTGCAGTCGAAGAAACAAACTCCCTGGGCCTCAATTCAGCCAAAGGAGAATAATGTTAAACCTCCTAGGCCACGACAGATAAGATTTGCAGATGTGGTAGAAAGGCCTAATTCATTGGATGCTGAGATATGATGTCTTCCCTCAAGACCAATATCTGTTCATAATGCCTTGAAGGACAGCACGGCCATGTATCTGCCAGCGCCCAAATTTTCCCTGGATGCCCCCCTCAGTTTGCTGTCGCAATCTTGGCTATTAGCAGCTTTTTTGTATACCAGTACATAGGTAATTGTCGTTGTGCATGCCATATTTGCGTACTCTGTGAACTCAAGGTAAGTTGGCGTTGGCTTAAATCTGTTGTAAATCACATATCTATACAGCATAGCTTCTGTTTGCTTCCTTACAGTCCATACATCATGTAGTACTCTTTAGTCCATAAAAGGTTGAGTTGATCATCAAATGTAATTGCATGTATCATAGAATAAAATGGCACAAGAAGTCAGGCTTCCATGCCTTTTTCTCAAAAAAAAGA]

[+] EMBL AK067793             [CACGACCGCCGCGAGTAGAGCAAGTAAGCTCGCACCGCACCGAAACCGCAGTGCGTTCTCCTTTTCTAGTGTTCGCCCGCCGCCATCCACACGCCGTGCCGCAGATCCTATCTCCCGTCCGCGGCGGCCGAAGCAATCGGACGAATTCGTCCCCCCCTGCTTCGCCTCCTCTTCGCTGTGTAGTTTGTGAGCGATGCGAGCGGATCGTCTGATGGCGGAGGGGGGCAAGCGGATCGACCTGGGGGCGCCGCTCCGGTCGGTGCGCCACGCCGACGCGCTGCCCTACCACAAGGCCGACCTCAACTCCGGCCCCGTCCGCCACCCCGGCGCGGTGCCCTTCGTCTGGGAGCAGCGGCCCGGGCAGCCAAAGAGCGTCCGCACCCGCCGCGCGCCGCCGTCGCCCACGACCGCGTCCCATCCTCAGCCGCTGGAGCACGGCGTGGAGGATGAGATCGACGGGAGCCCATACCACGACGCCCTCGGGGAGCACTATGTGGGGATACTCCATGGCGTGGACGCGTCCCCCGCCTGTTCCCGGACTGGCGCTCCGGCGCCGGCGCCGGCGCGTGATGAGAAGAGGGCGCAGGTGGCGGAGGCGGCGGTGTTACAGGCGAAGAAGGAAGTGACGGAGAAGCAGGTGGTGTCCGTGGCGGCGGTACTGCGGAAGGGAGATGACGACGACGACGATGAGGAGAGGTTCTCGGACGCGCTCGACACGCTCTCCAGGACAGAGTCCTTCACCGTGAACTGCAGCGTCAGCGGCCTCAGCGGCATGCCAGAGCCCACCTCCCGTGCCGCCGCCGGCGCCGAGGCAGGCGTACGCGGCATCATGATGGATAGATTCCTCCCGGCTGCGCAGGCGGTGGCCATAGGCTCCCCGCAGTACACCTTCCGGAAGGCCGGGGCAGCCAGCGCCACGAGCAATTCTGGCCGCGAGCTTGCGCGTGCAGCTGGGTCTAACGCGAGTGGAAGCAGTGGCGATGATCCCGGGAGGAGGACGCCCGTCCAGCTCCCCTACCAGCATTTGCCTCCCAATTATTTGTCTTGCAGCTATCCCAGACGTGAGGAGCAGGAAGATGAAGACGACGACGATGACTATGATGTGCATAGCACCCGGGGTTTTGCCTCCAAGGGATGTGGCTTGCTCCCTAGTCTCTGTGTGAAGGGTTCATTGTTACTTCTGAATCCAATGCCTGCGATGAAGCGTGGCAAGCCGCGGGGGAATGGGAGAGTCCGGGAGTTCGCATCCAAAGGCAGGGGACGAGGGGCGCCGAGTCCGCTTGCCCGGAGCTCACAAAACAAGCATCTTGGGTGTGCTTCCAACGGGTCCTGGGAGGATGTATACAAGCACAAATTAGAGCAGAAGTATGTTCGTCCAGGAGAGGATGGGAGGGGCAAGCTGACAAGTGAATCAAACCAGCTGACGTTCTGGAGTGACTCGCAGGCGGGCAATGGGTCTTCACCATTCCATCATTCCGCAGGTGGTGGTATGTCTCCCTATTACAGGGATGTTGTCCTGTCATCATCGAGTAAGGCAGATGAGTCTTTTGGAACAGGGGTAAAAGAAGACAAAATGAGTAGTAGTAATGGTTCCAGCTCACTTGGAAGAGACCATGATCGTGGTTCATTGCTTGGATCAGACCGCAGTAGTTTAAAGGGGTCAAGCTCCATTAGCTCAGGGCTGGATAGACCAGTGCATGTAGAATCAATGGATCACCGTGGAGATATTGACTCAGAAACTAGCCACTCGGTTCTGTTACTGGATTCAAGGACATCACTGGATGCTGGTGGGTGTGGCTCTCAGCTTGGAGAACAGATTGTCGGGAAAAACCCTATTGGGAAAGGTGAAGATAATGATCCATTGACAGAAAGGGTCTCTGAAGTTACAGAATGCACGTTGTTAGCACCTTCTGAAAAGTTAAGATCAGTGAATTTGGATGATGGGAAAACTTCTGGTCATCTGGAAGATAGTAGTGTTTCCAAAAGGGATATGCCTTTGCAATCTCTACTCCCATTACCAGTCCCAAGATCACCTTCAGAATCTTGGCTTTCTCGCACTTTACCATCCGTAACAAGCAAACCACCAGTGCCATCTTTTCTTGGAATTCAATTGCAGTCGAAGAAACAAACTCCCTGGGCCTCAATTCAGCCAAAGGAGAATAATGTTAAACCTCCTAGGCCACGACAGATAAGATTTGCAGATGTGGTAGAAAGGCCTAATTCATTGGATGCTGAGATATGATGTCTTCCCTCAAGACCAATATCTGTTCATAATGCCTTGAAGGACAGCACGGCCATGTATCTGCCAGCGCCCAAATTTTCCCTGGATGCCCCCCTCAGTTTGCTGTCGCAATCTTGGCTATTAGCAGCTTTTTTGTATACCAGTACATAGGTAATTGTCGTTGTGCATGCCATATTTGCGTACTCTGTGAACTCAAGGTAAGTTGGCGTTGGCTTAAATCTGTTGTAAATCACATATCTATACAGCATAGCTTCTGTTTGCTTCCTTACAGTCCATACATCATGTAGTACTCTTTAGTCCATAAAAGGTTGAGTTGATCATCAAATGTAATTGCATGTATCATAGAATAAAATGGCACAAGAAGTCAGGCTTCCATG                    ]
[+] EMBL CB649968             [                                                                                                              TCTCCCGTCCGCGGCGGCCGAAGCAATCGGACGAATTCGTCCCCCCCTGCTTCGCCTCCTCTTCGCTGTGTAGTTTGTGAGCGATGCGAGCGGATCGTCTGATGGCGGAGGGGGGCAAGCGGATCGACCTGGGGGCGCCGCTCCGGTCGGTGCGCCACGCCGACGCGCTGCCCTACCACAAGGCCGACCTCAACTCCGGCCCCGTCCGCCACCCCGGCGCGGTGCCCTTCGTCTGGGAGCAGCGGCCCGGGCAGCCAAAGAGCGTCCGCACCCGCCGCGCGCCGCCGTCGCCCACGACCGCGTCCCATCCTCAGCCGCTGGAGCACGGCGTGGAGGATGAGATCGACGGGAGCCCATACCACGACGCCCTCGGGGAGCACTATGTGGGGATACTCCATGGCGTGGACGCGTCCCCCGCCTGTTCCCGGACTGGCGCTCCGGCGCCGGCGCCGGCGCGTGATGAGAAGAGGGCGCAGGTGGCGGAGGCGGCGGTGTTACAGGCGAAGAAGGAAGTGACGGAGAAGCAGGTGGTGTCCGTGGCGGCGGTACTGCGGAAGGGAGATGACGACGACGACGATGAGGAGAGGTTCTCGGACGCGCTCGACACGCTCTCCAGGACGGAGTCCTTCACCGTGAACTGCAGCGTCAGCGGCCTCAGCGGCATGCCAGAGCCCACCTCCCGTGCCGCCGCCGGCGCCGAGGCAGGCGTACGCGGCATCATGATGGATAGATTCCTCCCGGCTGCGCAGGCGGTGGCCATAGGCTCTCCGCAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB644835             [                                                                                                                        GCGGCGGCCGAAGCAATCGGACGAATTCGTCCCCCCCTGCTTCGCCTCCTCTTCGCTGTGTAGTTTGTGAGCGATGCGAGCGGATCGTCTGATGGCGGAGGGGGGCAAGCGGATCGACCTGGGGGCGCCGCTCCGGTCGGTGCGCCACGCCGACGCGCTGCCCTACCACAAGGCCGACCTCAACTCCGGCCCCGTCCGCCACCCCGGCGCGGTGCCCTTCGTCTGGGAGCAGCGGCCCGGGCAGCCAAAGAGCGTCCGCACCCGCCGCGCGCCGCCGTCGCCCACGACCGCGTCCCATCCTCAGCCGCTGGAGCACGGCGTGGAGGATGAGATCGACGGGAGCCCATACCACGACGCCCTCGGGGAGCACTATGTGGGGATACTCCATGGCGTGGACGCGTCCCCCGCCTGTTCCCGGACTGGCGCTCCGGCGCCGGCGCCGGCGCGTGATGAGAAGAGGGCGCAGGTGGCGGAGGCGGCGGTGTTACAGGCGAAGAAAGAAGTGACGGAGAAGCAGGTGGTGTCCGTGGCGGCGGTACTGCGGAAGGGAGATGACGACGACGACGATGAGGAGAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF306670             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGGCGTGGACGCGTCCCCCGCCTGTTCCCGGACTGGCGCTCCGGCGCCGGCGCCGGCGCGTGATGAGAAGAGGGCGCAGGTGGCGGAGGCGGCGGTGTTACAGGCGAAGAAGGAAGTGACGGAGAAGCAGGTGGTGTCCGTGGCGGCGGTACTGCGGAAGGGAGATGACGACGACGACGATGAGGAGAGGTTCTCGGACGCGCTCGACACGCTCTCCAGGACGGAGTCCTTCACCGTGAACTGCAGCGTCAGCGGCCTCAGCGGCATGCCAGAGCCCACCTCCCGTGCCGCCGCCGGCGCCGAGGCAGGCGTACGCGGCATCATGATGGATAGATTCCTCCCGGCTGCGCAGGCGGTGGCCATAGGCTCCCCGCAGTACACCTTCCGGAAGGCCGGGGCAGCCAGCGCCACGAGCAATTCTGGCCGCGAGCTTGCGCGTGCAGCTGGGTCTAACGCGAGTGGAAGCAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB644836             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGTGAATTTGGATGATGGGAAAACTTCTGGTCATCTGGAAGATAGTAGTGTTTCCAAAAGGGATATGCCTTTGCAATCTCTACTCCCATTACCAGTCCCAAGATCACCTTCAGAATCTTGGCTTTCTCGCACTTTACCATCCGTAACAAGCAAACCACCAGTGCCATCTTTTCTTGGAATTCAATTGCAGTCGAAGAAACAAACTCCCTGGGCCTCAATTCAGCCAAAGGAGAATAATGTTAAACCTCCTAGGCCACGACAGATAAGATTTGCAGATGTGGTAGAAAGGCCTAATTCATTGGATGCTGAGATATGATGTCTTCCCTCAAGACCAATATCTGTTCATAATGCCTTGAAGGACAGCACGGCCATGTATCTGCCAGCGCCCAAATTTTCCCTGGATGCCCCCCTCAGTTTGCTGTCGCAATCTTGGCTATTAGCAGCTTTTTTGTATACCAGTACATAGGTAATTGTCGTTGTGCATGCCATATTTGCGTACTCTGTGAACTCAAGGTAAGTTGGCGTTGGCTTAAATCTGTTGTAAATCACATATCTATACAGCATAGCTTCTGTTTGCTTCCTTACAGTCCATACATCATGTAGTACTCTTTAGTCCATAAAAGGTTGAGTTGATCATCAAATGTAATTGCATGTATCATAGAATAAAATGGCACAAGAAGTCAGGCTTCCATGCCTTTTTCTCAAAAAAAAGA]
[+] EMBL CF328182             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TAGGTAATTGTCGTTGTGCATGCCATATTTGCGTACTCTGTGAACTCAAGGTAAGTTGGCGTTGGCTTAAATCTGTTGTAAATCACATATCTATACAGCATAGCTTCTGTTTGCTTCCTTACAGTCCATACATCATGTAGTACTCTTTAGTCCATAAAAGGTTGAGTTGATCATCAAATGTAATTGCATGTATCATAGAATAAAAaaa                                          ]
[-] EMBL CF328181             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGGTAATTGTCGTTGTGCATGCCATATTTGCGTACTCTGTGAACTCAAGGTAAGTTGGCGTTGGCTTAAATCTGTTGTAAATCACATATCTATACAGCATAGCTTCTGTTTGCTTCCTTACAGTCCATACATCATGTAGTACTCTTTAGTCCATAAAAGGTTGAGTTGATCATCAAATGTAATTGCATGTATCATAGAATAAAAaaaa                                         ]




>consensus_11175#0
CACGACCGCCGCGAGTAGAGCAAGTAAGCTCGCACCGCACCGAAACCGCAGTGCGTTCTC
CTTTTCTAGTGTTCGCCCGCCGCCATCCACACGCCGTGCCGCAGATCCTATCTCCCGTCC
GCGGCGGCCGAAGCAATCGGACGAATTCGTCCCCCCCTGCTTCGCCTCCTCTTCGCTGTG
TAGTTTGTGAGCGATGCGAGCGGATCGTCTGATGGCGGAGGGGGGCAAGCGGATCGACCT
GGGGGCGCCGCTCCGGTCGGTGCGCCACGCCGACGCGCTGCCCTACCACAAGGCCGACCT
CAACTCCGGCCCCGTCCGCCACCCCGGCGCGGTGCCCTTCGTCTGGGAGCAGCGGCCCGG
GCAGCCAAAGAGCGTCCGCACCCGCCGCGCGCCGCCGTCGCCCACGACCGCGTCCCATCC
TCAGCCGCTGGAGCACGGCGTGGAGGATGAGATCGACGGGAGCCCATACCACGACGCCCT
CGGGGAGCACTATGTGGGGATACTCCATGGCGTGGACGCGTCCCCCGCCTGTTCCCGGAC
TGGCGCTCCGGCGCCGGCGCCGGCGCGTGATGAGAAGAGGGCGCAGGTGGCGGAGGCGGC
GGTGTTACAGGCGAAGAAGGAAGTGACGGAGAAGCAGGTGGTGTCCGTGGCGGCGGTACT
GCGGAAGGGAGATGACGACGACGACGATGAGGAGAGGTTCTCGGACGCGCTCGACACGCT
CTCCAGGACGGAGTCCTTCACCGTGAACTGCAGCGTCAGCGGCCTCAGCGGCATGCCAGA
GCCCACCTCCCGTGCCGCCGCCGGCGCCGAGGCAGGCGTACGCGGCATCATGATGGATAG
ATTCCTCCCGGCTGCGCAGGCGGTGGCCATAGGCTCCCCGCAGTACACCTTCCGGAAGGC
CGGGGCAGCCAGCGCCACGAGCAATTCTGGCCGCGAGCTTGCGCGTGCAGCTGGGTCTAA
CGCGAGTGGAAGCAGTGGCGATGATCCCGGGAGGAGGACGCCCGTCCAGCTCCCCTACCA
GCATTTGCCTCCCAATTATTTGTCTTGCAGCTATCCCAGACGTGAGGAGCAGGAAGATGA
AGACGACGACGATGACTATGATGTGCATAGCACCCGGGGTTTTGCCTCCAAGGGATGTGG
CTTGCTCCCTAGTCTCTGTGTGAAGGGTTCATTGTTACTTCTGAATCCAATGCCTGCGAT
GAAGCGTGGCAAGCCGCGGGGGAATGGGAGAGTCCGGGAGTTCGCATCCAAAGGCAGGGG
ACGAGGGGCGCCGAGTCCGCTTGCCCGGAGCTCACAAAACAAGCATCTTGGGTGTGCTTC
CAACGGGTCCTGGGAGGATGTATACAAGCACAAATTAGAGCAGAAGTATGTTCGTCCAGG
AGAGGATGGGAGGGGCAAGCTGACAAGTGAATCAAACCAGCTGACGTTCTGGAGTGACTC
GCAGGCGGGCAATGGGTCTTCACCATTCCATCATTCCGCAGGTGGTGGTATGTCTCCCTA
TTACAGGGATGTTGTCCTGTCATCATCGAGTAAGGCAGATGAGTCTTTTGGAACAGGGGT
AAAAGAAGACAAAATGAGTAGTAGTAATGGTTCCAGCTCACTTGGAAGAGACCATGATCG
TGGTTCATTGCTTGGATCAGACCGCAGTAGTTTAAAGGGGTCAAGCTCCATTAGCTCAGG
GCTGGATAGACCAGTGCATGTAGAATCAATGGATCACCGTGGAGATATTGACTCAGAAAC
TAGCCACTCGGTTCTGTTACTGGATTCAAGGACATCACTGGATGCTGGTGGGTGTGGCTC
TCAGCTTGGAGAACAGATTGTCGGGAAAAACCCTATTGGGAAAGGTGAAGATAATGATCC
ATTGACAGAAAGGGTCTCTGAAGTTACAGAATGCACGTTGTTAGCACCTTCTGAAAAGTT
AAGATCAGTGAATTTGGATGATGGGAAAACTTCTGGTCATCTGGAAGATAGTAGTGTTTC
CAAAAGGGATATGCCTTTGCAATCTCTACTCCCATTACCAGTCCCAAGATCACCTTCAGA
ATCTTGGCTTTCTCGCACTTTACCATCCGTAACAAGCAAACCACCAGTGCCATCTTTTCT
TGGAATTCAATTGCAGTCGAAGAAACAAACTCCCTGGGCCTCAATTCAGCCAAAGGAGAA
TAATGTTAAACCTCCTAGGCCACGACAGATAAGATTTGCAGATGTGGTAGAAAGGCCTAA
TTCATTGGATGCTGAGATATGATGTCTTCCCTCAAGACCAATATCTGTTCATAATGCCTT
GAAGGACAGCACGGCCATGTATCTGCCAGCGCCCAAATTTTCCCTGGATGCCCCCCTCAG
TTTGCTGTCGCAATCTTGGCTATTAGCAGCTTTTTTGTATACCAGTACATAGGTAATTGT
CGTTGTGCATGCCATATTTGCGTACTCTGTGAACTCAAGGTAAGTTGGCGTTGGCTTAAA
TCTGTTGTAAATCACATATCTATACAGCATAGCTTCTGTTTGCTTCCTTACAGTCCATAC
ATCATGTAGTACTCTTTAGTCCATAAAAGGTTGAGTTGATCATCAAATGTAATTGCATGT
ATCATAGAATAAAATGGCACAAGAAGTCAGGCTTCCATGCCTTTTTCTCAAAAAAAAGA

consensusID : consensus_11175#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 795
fasta sequence 
                              [GAAGAGGGCGCAGGTGGCGGAGGCGGCGGTGTTACAGGCGAAGAAGGAAGTGACGGAGAAGCAGGTGGTGTCCGTGGCGGCGGTACTGCGGAAGGGAGATGACGACGACGACGATGAGGAGAGGTTCTCGGACGCGCTCGACACGCTCTCCAGGACGGAGTCCTTCACCGTGAACTGCAGCGTCAGCGGCCTCAGCGGCATGCCAGAGCCCACCTCCCGTGCCGCCGCCGGCGCCGAGGCAGGCGTACGCGGCATCATGATGGATAGATTCCTCCCGGCTGCGCAGGCGGTGGCCATAGGCTCCCCGCAGTACACCTTCCGGAAGGCCGGGGCAGCCAGCGCCACGAGCAATTCTGGCCGCGAGCTTGCGCGTGCAGCTGGGTCTAACGCGAGTGGAAGCAGTGGCGATGATCCCGGGAGGAGGACGCCCGTCCAGCTCCCCTACCAGCATTTGCCTCCCAATTATTTGTCTTGCAGCTATCCCAGACGTGAGGAGCAGGAAGATGAAGACGACGACGATGACTATGATGTGCATAGCACCCGGGGTTTTGCCTCCAAGGGATGTGGCTTGCTCCCTAGTCTCTGTGTGAAGGGTTCATTGTTACTTCTGAATCCAATGCCTGCGATGAAGCGTGGCAAGCCGCGGGGGAATGGGAGAGTCCGGGAGTTCGCATCCAAAGGCAGGGGACGAGGGGCGCCGAGTCCGCTTGCCCGGAGCTCACAAAACAAGCATCTTGGGTGTGCTTCCAACCGGGGTACTGATGCAGATACATGTTACACAGTCCATTTCATGAG]

[-] EMBL CB649969             [GAAGAGGGCGCAGGTGGCGGAGGCGGCGGTGTTACAGGCGAAGAAGGAAGTGACGGAGAAGCAGGTGGTGTCCGTGGCGGCGGTACTGCGGAAGGGAGATGACGACGACGACGATGAGGAGAGGTTCTCGGACGCGCTCGACACGCTCTCCAGGACGGAGTCCTTCACCGTGAACTGCAGCGTCAGCGGCCTCAGCGGCATGCCAGAGCCCACCTCCCGTGCCGCCGCCGGCGCCGAGGCAGGCGTACGCGGCATCATGATGGATAGATTCCTCCCGGCTGCGCAGGCGGTGGCCATAGGCTCCCCGCAGTACACCTTCCGGAAGGCCGGGGCAGCCAGCGCCACGAGCAATTCTGGCCGCGAGCTTGCGCGTGCAGCTGGGTCTAACGCGAGTGGAAGCAGTGGCGATGATCCCGGGAGGAGGACGCCCGTCCAGCTCCCCTACCAGCATTTGCCTCCCAATTATTTGTCTTGCAGCTATCCCAGACGTGAGGAGCAGGAAGATGAAGACGACGACGATGACTATGATGTGCATAGCACCCGGGGTTTTGCCTCCAAGGGATGTGGCTTGCTCCCTAGTCTCTGTGTGAAGGGTTCATTGTTACTTCTGAATCCAATGCCTGCGATGAAGCGTGGCAAGCCGCGGGGGAATGGGAGAGTCCGGGAGTTCGCATCCAAAGGCAGGGGACGAGGGGCGCCGAGTCCGCTTGCCCGGAGCTCACAAAACAAGCATCTTGGGTGTGCTTCCAACCGGGGTACTGATGCAGATACATGTTACACAGTCCATTTCATGAG]




>consensus_11175#1
GAAGAGGGCGCAGGTGGCGGAGGCGGCGGTGTTACAGGCGAAGAAGGAAGTGACGGAGAA
GCAGGTGGTGTCCGTGGCGGCGGTACTGCGGAAGGGAGATGACGACGACGACGATGAGGA
GAGGTTCTCGGACGCGCTCGACACGCTCTCCAGGACGGAGTCCTTCACCGTGAACTGCAG
CGTCAGCGGCCTCAGCGGCATGCCAGAGCCCACCTCCCGTGCCGCCGCCGGCGCCGAGGC
AGGCGTACGCGGCATCATGATGGATAGATTCCTCCCGGCTGCGCAGGCGGTGGCCATAGG
CTCCCCGCAGTACACCTTCCGGAAGGCCGGGGCAGCCAGCGCCACGAGCAATTCTGGCCG
CGAGCTTGCGCGTGCAGCTGGGTCTAACGCGAGTGGAAGCAGTGGCGATGATCCCGGGAG
GAGGACGCCCGTCCAGCTCCCCTACCAGCATTTGCCTCCCAATTATTTGTCTTGCAGCTA
TCCCAGACGTGAGGAGCAGGAAGATGAAGACGACGACGATGACTATGATGTGCATAGCAC
CCGGGGTTTTGCCTCCAAGGGATGTGGCTTGCTCCCTAGTCTCTGTGTGAAGGGTTCATT
GTTACTTCTGAATCCAATGCCTGCGATGAAGCGTGGCAAGCCGCGGGGGAATGGGAGAGT
CCGGGAGTTCGCATCCAAAGGCAGGGGACGAGGGGCGCCGAGTCCGCTTGCCCGGAGCTC
ACAAAACAAGCATCTTGGGTGTGCTTCCAACCGGGGTACTGATGCAGATACATGTTACAC
AGTCCATTTCATGAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11175#0      CACGACCGCCGCGAGTAGAGCAAGTAAGCTCGCACCGCACCGAAACCGCAGTGCGTTCTC 60
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      CTTTTCTAGTGTTCGCCCGCCGCCATCCACACGCCGTGCCGCAGATCCTATCTCCCGTCC 120
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      GCGGCGGCCGAAGCAATCGGACGAATTCGTCCCCCCCTGCTTCGCCTCCTCTTCGCTGTG 180
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      TAGTTTGTGAGCGATGCGAGCGGATCGTCTGATGGCGGAGGGGGGCAAGCGGATCGACCT 240
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      GGGGGCGCCGCTCCGGTCGGTGCGCCACGCCGACGCGCTGCCCTACCACAAGGCCGACCT 300
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      CAACTCCGGCCCCGTCCGCCACCCCGGCGCGGTGCCCTTCGTCTGGGAGCAGCGGCCCGG 360
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      GCAGCCAAAGAGCGTCCGCACCCGCCGCGCGCCGCCGTCGCCCACGACCGCGTCCCATCC 420
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      TCAGCCGCTGGAGCACGGCGTGGAGGATGAGATCGACGGGAGCCCATACCACGACGCCCT 480
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      CGGGGAGCACTATGTGGGGATACTCCATGGCGTGGACGCGTCCCCCGCCTGTTCCCGGAC 540
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      TGGCGCTCCGGCGCCGGCGCCGGCGCGTGATGAGAAGAGGGCGCAGGTGGCGGAGGCGGC 600
consensus_11175#1      ---------------------------------GAAGAGGGCGCAGGTGGCGGAGGCGGC 27
                                                        ***************************

consensus_11175#0      GGTGTTACAGGCGAAGAAGGAAGTGACGGAGAAGCAGGTGGTGTCCGTGGCGGCGGTACT 660
consensus_11175#1      GGTGTTACAGGCGAAGAAGGAAGTGACGGAGAAGCAGGTGGTGTCCGTGGCGGCGGTACT 87
                       ************************************************************

consensus_11175#0      GCGGAAGGGAGATGACGACGACGACGATGAGGAGAGGTTCTCGGACGCGCTCGACACGCT 720
consensus_11175#1      GCGGAAGGGAGATGACGACGACGACGATGAGGAGAGGTTCTCGGACGCGCTCGACACGCT 147
                       ************************************************************

consensus_11175#0      CTCCAGGACGGAGTCCTTCACCGTGAACTGCAGCGTCAGCGGCCTCAGCGGCATGCCAGA 780
consensus_11175#1      CTCCAGGACGGAGTCCTTCACCGTGAACTGCAGCGTCAGCGGCCTCAGCGGCATGCCAGA 207
                       ************************************************************

consensus_11175#0      GCCCACCTCCCGTGCCGCCGCCGGCGCCGAGGCAGGCGTACGCGGCATCATGATGGATAG 840
consensus_11175#1      GCCCACCTCCCGTGCCGCCGCCGGCGCCGAGGCAGGCGTACGCGGCATCATGATGGATAG 267
                       ************************************************************

consensus_11175#0      ATTCCTCCCGGCTGCGCAGGCGGTGGCCATAGGCTCCCCGCAGTACACCTTCCGGAAGGC 900
consensus_11175#1      ATTCCTCCCGGCTGCGCAGGCGGTGGCCATAGGCTCCCCGCAGTACACCTTCCGGAAGGC 327
                       ************************************************************

consensus_11175#0      CGGGGCAGCCAGCGCCACGAGCAATTCTGGCCGCGAGCTTGCGCGTGCAGCTGGGTCTAA 960
consensus_11175#1      CGGGGCAGCCAGCGCCACGAGCAATTCTGGCCGCGAGCTTGCGCGTGCAGCTGGGTCTAA 387
                       ************************************************************

consensus_11175#0      CGCGAGTGGAAGCAGTGGCGATGATCCCGGGAGGAGGACGCCCGTCCAGCTCCCCTACCA 1020
consensus_11175#1      CGCGAGTGGAAGCAGTGGCGATGATCCCGGGAGGAGGACGCCCGTCCAGCTCCCCTACCA 447
                       ************************************************************

consensus_11175#0      GCATTTGCCTCCCAATTATTTGTCTTGCAGCTATCCCAGACGTGAGGAGCAGGAAGATGA 1080
consensus_11175#1      GCATTTGCCTCCCAATTATTTGTCTTGCAGCTATCCCAGACGTGAGGAGCAGGAAGATGA 507
                       ************************************************************

consensus_11175#0      AGACGACGACGATGACTATGATGTGCATAGCACCCGGGGTTTTGCCTCCAAGGGATGTGG 1140
consensus_11175#1      AGACGACGACGATGACTATGATGTGCATAGCACCCGGGGTTTTGCCTCCAAGGGATGTGG 567
                       ************************************************************

consensus_11175#0      CTTGCTCCCTAGTCTCTGTGTGAAGGGTTCATTGTTACTTCTGAATCCAATGCCTGCGAT 1200
consensus_11175#1      CTTGCTCCCTAGTCTCTGTGTGAAGGGTTCATTGTTACTTCTGAATCCAATGCCTGCGAT 627
                       ************************************************************

consensus_11175#0      GAAGCGTGGCAAGCCGCGGGGGAATGGGAGAGTCCGGGAGTTCGCATCCAAAGGCAGGGG 1260
consensus_11175#1      GAAGCGTGGCAAGCCGCGGGGGAATGGGAGAGTCCGGGAGTTCGCATCCAAAGGCAGGGG 687
                       ************************************************************

consensus_11175#0      ACGAGGGGCGCCGAGTCCGCTTGCCCGGAGCTCACAAAACAAGCATCTTGGGTGTGCTTC 1320
consensus_11175#1      ACGAGGGGCGCCGAGTCCGCTTGCCCGGAGCTCACAAAACAAGCATCTTGGGTGTGCTTC 747
                       ************************************************************

consensus_11175#0      CAAC--GGGTCCTGG-GAGGATGTATACAAGCACAAATTAGAGCAGAAGTATGTTCGTCC 1377
consensus_11175#1      CAACCGGGGTACTGATGCAGATACATGTTA-CACAGTCCATTTCATGAG----------- 795
                       ****  **** ***  *  ***  **   * ****    *   **  **           

consensus_11175#0      AGGAGAGGATGGGAGGGGCAAGCTGACAAGTGAATCAAACCAGCTGACGTTCTGGAGTGA 1437
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      CTCGCAGGCGGGCAATGGGTCTTCACCATTCCATCATTCCGCAGGTGGTGGTATGTCTCC 1497
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      CTATTACAGGGATGTTGTCCTGTCATCATCGAGTAAGGCAGATGAGTCTTTTGGAACAGG 1557
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      GGTAAAAGAAGACAAAATGAGTAGTAGTAATGGTTCCAGCTCACTTGGAAGAGACCATGA 1617
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      TCGTGGTTCATTGCTTGGATCAGACCGCAGTAGTTTAAAGGGGTCAAGCTCCATTAGCTC 1677
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      AGGGCTGGATAGACCAGTGCATGTAGAATCAATGGATCACCGTGGAGATATTGACTCAGA 1737
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      AACTAGCCACTCGGTTCTGTTACTGGATTCAAGGACATCACTGGATGCTGGTGGGTGTGG 1797
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      CTCTCAGCTTGGAGAACAGATTGTCGGGAAAAACCCTATTGGGAAAGGTGAAGATAATGA 1857
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      TCCATTGACAGAAAGGGTCTCTGAAGTTACAGAATGCACGTTGTTAGCACCTTCTGAAAA 1917
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      GTTAAGATCAGTGAATTTGGATGATGGGAAAACTTCTGGTCATCTGGAAGATAGTAGTGT 1977
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      TTCCAAAAGGGATATGCCTTTGCAATCTCTACTCCCATTACCAGTCCCAAGATCACCTTC 2037
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      AGAATCTTGGCTTTCTCGCACTTTACCATCCGTAACAAGCAAACCACCAGTGCCATCTTT 2097
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      TCTTGGAATTCAATTGCAGTCGAAGAAACAAACTCCCTGGGCCTCAATTCAGCCAAAGGA 2157
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      GAATAATGTTAAACCTCCTAGGCCACGACAGATAAGATTTGCAGATGTGGTAGAAAGGCC 2217
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      TAATTCATTGGATGCTGAGATATGATGTCTTCCCTCAAGACCAATATCTGTTCATAATGC 2277
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      CTTGAAGGACAGCACGGCCATGTATCTGCCAGCGCCCAAATTTTCCCTGGATGCCCCCCT 2337
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      CAGTTTGCTGTCGCAATCTTGGCTATTAGCAGCTTTTTTGTATACCAGTACATAGGTAAT 2397
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      TGTCGTTGTGCATGCCATATTTGCGTACTCTGTGAACTCAAGGTAAGTTGGCGTTGGCTT 2457
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      AAATCTGTTGTAAATCACATATCTATACAGCATAGCTTCTGTTTGCTTCCTTACAGTCCA 2517
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      TACATCATGTAGTACTCTTTAGTCCATAAAAGGTTGAGTTGATCATCAAATGTAATTGCA 2577
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      TGTATCATAGAATAAAATGGCACAAGAAGTCAGGCTTCCATGCCTTTTTCTCAAAAAAAA 2637
consensus_11175#1      ------------------------------------------------------------
                                                                                   

consensus_11175#0      GA 2639
consensus_11175#1      --


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)