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Oryza sativa
cluster # 11179 cluster # 11179       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11179#0 length = 2145 sequences # 7  
consensus_11179#1 length = 671 sequences # 1  

consensusID : consensus_11179#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2145
fasta sequence
                              [GGCTTCCTCTCGCCGCACCCATCGATATCCATCTCCATCTCATCTCGCCACCCAAAACCCTAAACCTCCCTCCCATTTCCGCCGCCGCCGCCATGCAGTCGCTTGCCCTCACCTCCCCCTCCCTTCCGGCGCCGGCGACCGCATCCGGCCGCCGCCGCCGCCGCCTGGAGCGCATCCGCGCCACCGCGGTGTCCGACGAGCCGAAGCTGAACAAGTACAGCGCGCGCATCACGGAGCCCAAGTCGCAGGGGGCGTCGCAGGCGGTGCTCTACGGCGTGGGGCTCACCGACGCCGACCTCCGCAAGCCGCAGGTGGGCGTCTCCTCCGTCTGGTACGAGGGCAACACCTGCAACATGCACCTTCTCCGCCTCGCCGAGGCCGTCAGGGACGGCGTCCGCGAGGCCGGCATGGTGGCCTTCCGCTTCAACACCGTCGGGGTCAGCGACGCCATCTCCATGGGCACCCGGGGCATGTGCTACAGCCTCCAGTCGCGCGACCTCATCGCCGACAGCATCGAGACCGTCATGGGCGCGCAGCACTACGACGCCAACATCTCCATTCCTGGATGCGACAAGAACATGCCAGGAACAATAATGGCAATGGGGCGGCTGAACCGACCAAGTATCATGATATATGGTGGAACTATTAAGCCTGGTCATTTTCAGGGTAATTCTTATGACATAGTATCTGCTTTCCAGTGCTATGGAGAATTTGTTACCGGATCAATCAGTGATGAGCAAAGAAAGAATGTGCTCCGCAACTCATGCCCAGGAGCAGGTGCGTGTGGTGGTATGTACACCGCAAATACAATGGCATCCGCCATCGAGACCATGGGTATGAGCCTTCCGTACAGTTCTTCAACCCCTGCTGAAGACCCACTAAAGCTAGAGGAATGCCGTCTTGCTGGGAAGTATCTTTTAGAATTGTTAAAGATGGATTTGAAGCCTAAAGACATTATCACTGAGAAATCTTTGCGGAACGCAATGGTCATTGTCATGGCACTTGGTGGGTCTACTAATGCTGTTTTGCATTTAATTGCTATCGCTAGGTCTGTAGGTCTGCAATTAACTCTTGATGATTTTCAGAAGGTCAGTGACCAAGTTCCTTTCCTTGCGGACCTTAAGCCTAGTGGCAAATATGTCATGGAGGATCTGCATAAGATTGGTGGAACACCTGCAGTAATTCATTATCTTCTGGAGCAAGGTCTTCTTGATGGTGATTGTATGACCGTCACTGGGAAAACTCTAGCGGAAAATGCTAAAATCTTCCCTCCTCTGTCCGAAGGAC-AGCAAAT-AATAAGGCCCCTGGACAACCCAATCAAATCAACTGGTCATATACAAATACTTTATGGCAATCTTGCACCAGAAGGTTCTGTAGCAAAAATTACTGGCAAAGAGGGGATGTTTTTCTCAGGCCCTGCACTAGTGTTTGAGGGTGAAGAATCTATGATTACAGCTATATCAGAAAACCCAGCGAATTTCAAGGGGAAGGTAGTAGTGATACGAGGAGAAGGACCGAAAGGTGGACCAGGGATGCCTGAAATGCTGACTCCAACTAGTGCAATAATGGGTGCTGGTCTTGGGAAGGAGTGTGCCCTGCTGACCGATGGCAGATTTTCTGGAGGATCACATGGATTTGTTGTAGGCCACATTTGTCCTGAAGCACAGGAGGGAGGTCCAATTGGTCTTGTTCAAAACGGTGACAAAATTA-CCATTGATGTTGTGAAGAGAGTAATTGATGTTGAACTGACTGAAGC-TGAGCTGGAAGAAAGACGGAGGAAA-TGGACGCCGCCGCCACACAAGGCTGCCCGTGGAGCGCTTTGGAAGTACACGAAGCTCGTGTCCCCTGCATCAAGAGGATGCGTCACCGATGAGTAGATCCTGCTGCTGCTGCTCGAGTAATAAAAAATAAAAAATAAAAAAGAGGAGGAATAGGAGGAGGTTTTTGAGGAACAGTTTGCATGTAACAGTAGTTCATGGTGGTGGTTGGTGAAGGCTGATTGTGATGGTAGTTCCCTTCAATAAAATGGCAGTTTCCTAGGTGCTCAAGCAATGCCGAGGGAACTGCTTGCTGAATAATCCATTGTCTGTTGCTGTGTTGGACAAGTTTTGTCTGAAAATCGCCTGATGCTTGAGAAAAAAAAAA]

[+] EMBL AK103178             [GGCTTCCTCTCGCCGCACCCATCGATATCCATCTCCATCTCATCTCGCCACCCAAAACCCTAAACCTCCCTCCCATTTCCGCCGCCGCCGCCATGCAGTCGCTTGCCCTCACCTCCCCCTCCCTTCCGGCGCCGGCGACCGCATCCGGCCGCCGCCGCCGCCGCCTGGAGCGCATCCGCGCCACCGCGGTGTCCGACGAGCCGAAGCTGAACAAGTACAGCGCGCGCATCACGGAGCCCAAGTCGCAGGGGGCGTCGCAGGCGGTGCTCTACGGCGTGGGGCTCACCGACGCCGACCTCCGCAAGCCGCAGGTGGGCGTCTCCTCCGTCTGGTACGAGGGCAACACCTGCAACATGCACCTTCTCCGCCTCGCCGAGGCCGTCAGGGACGGCGTCCGCGAGGCCGGCATGGTGGCCTTCCGCTTCAACACCGTCGGGGTCAGCGACGCCATCTCCATGGGCACCCGGGGCATGTGCTACAGCCTCCAGTCGCGCGACCTCATCGCCGACAGCATCGAGACCGTCATGGGCGCGCAGCACTACGACGCCAACATCTCCATTCCTGGATGCGACAAGAACATGCCAGGAACAATAATGGCAATGGGGCGGCTGAACCGACCAAGTATCATGATATATGGTGGAACTATTAAGCCTGGTCATTTTCAGGGTAATTCTTATGACATAGTATCTGCTTTCCAGTGCTATGGAGAATTTGTTACCGGATCAATCAGTGATGAGCAAAGAAAGAATGTGCTCCGCAACTCATGCCCAGGAGCAGGTGCGTGTGGTGGTATGTACACCGCAAATACAATGGCATCCGCCATCGAGACCATGGGTATGAGCCTTCCGTACAGTTCTTCAACCCCTGCTGAAGACCCACTAAAGCTAGAGGAATGCCGTCTTGCTGGGAAGTATCTTTTAGAATTGTTAAAGATGGATTTGAAGCCTAAAGACATTATCACTGAGAAATCTTTGCGGAACGCAATGGTCATTGTCATGGCACTTGGTGGGTCTACTAATGCTGTTTTGCATTTAATTGCTATCGCTAGGTCTGTAGGTCTGCAATTAACTCTTGATGATTTTCAGAAGGTCAGTGACCAAGTTCCTTTCCTTGCGGACCTTAAGCCTAGTGGCAAATATGTCATGGAGGATCTGCATAAGATTGGTGGAACACCTGCAGTAATTCATTATCTTCTGGAGCAAGGTCTTCTTGATGGTGATTGTATGACCGTCACTGGGAAAACTCTAGCGGAAAATGCTAAAATCTTCCCTCCTCTGTCCGAAGGAC AGCAAAT AATAAGGCCCCTGGACAACCCAATCAAATCAACTGGTCATATACAAATACTTTATGGCAATCTTGCACCAGAAGGTTCTGTAGCAAAAATTACTGGCAAAGAGGGGATGTTTTTCTCAGGCCCTGCACTAGTGTTTGAGGGTGAAGAATCTATGATTACAGCTATATCAGAAAACCCAGCGAATTTCAAGGGGAAGGTAGTAGTGATACGAGGAGAAGGACCGAAAGGTGGACCAGGGATGCCTGAAATGCTGACTCCAACTAGTGCAATAATGGGTGCTGGTCTTGGGAAGGAGTGTGCCCTGCTGACCGATGGCAGATTTTCTGGAGGATCACATGGATTTGTTGTAGGCCACATTTGTCCTGAAGCACAGGAGGGAGGTCCAATTGGTCTTGTTCAAAACGGTGACAAAATTA CCATTGATGTTGTGAAGAGAGTAATTGATGTTGAACTGACTGAAGC TGAGCTGGAAGAAAGACGGAGGAAA TGGACGCCGCCGCCACACAAGGCTGCCCGTGGAGCGCTTTGGAAGTACACGAAGCTCGTGTCCCCTGCATCAAGAGGATGCGTCACCGATGAGTAGATCCTGCTGCTGCTGCTCGAGTAATAAAAAATAAAAAATAAAAAAGAGGAGGAATAGGAGGAGGTTTTTGAGGAACAGTTTGCATGTAACAGTAGTTCATGGTGGTGGTTGGTGAAGGCTGATTGTGATGGTAGTTCCCTTCAATAAAATGGCAGTTTCCTAGGTGCTCAAGCAATGCCGAGGGAACTGCTTGCTGAATAATCCATTGTCTGTT                                                      ]
[+] EMBL AK102083             [     CCTCTCGCCGCACCCATCGATATCCATCTCCATCTCATCTCGCCACCCAAAACCCTAAACCTCCCTCCCATTTCCGCCGCCGCCGCCATGCAGTCGCTTGCCCTCACCTCCCCCTCCCTTCCGGCGCCGGCGACCGCATCCGGCCGCCGCCGCCGCCGCCTGGAGCGCATCCGCGCCACCGCGGTGTCCGACGAGCCGAAGCTGAACAAGTACAGCGCGCGCATCACGGAGCCCAAGTCGCAGGGGGCGTCGCAGGCGGTGCTCTACGGCGTGGGGCTCACCGACGCCGACCTCCGCAAGCCGCAGGTGGGCGTCTCCTCCGTCTGGTACGAGGGCAACACCTGCAACATGCACCTTCTCCGCCTCGCCGAGGCCGTCAGGGACGGCGTCCGCGAGGCCGGCATGGTGGCCTTCCGCTTCAACACCGTCGGGGTCAGCGACGCCATCTCCATGGGCACCCGGGGCATGTGCTACAGCCTCCAGTCGCGCGACCTCATCGCCGACAGCATCGAGACCGTCATGGGCGCGCAGCACTACGACGCCAACATCTCCATTCCTGGATGCGACAAGAACATGCCAGGAACAATAATGGCAATGGGGCGGCTGAACCGACCAAGTATCATGATATATGGTGGAACTATTAAGCCTGGTCATTTTCAGGGTAATTCTTATGACATAGTATCTGCTTTCCAGTGCTATGGAGAATTTGTTACCGGATCAATCAGTGATGAGCAAAGAAAGAATGTGCTCCGCAACTCATGCCCAGGAGCAGGTGCGTGTGGTGGTATGTACACCGCAAATACAATGGCATCCGCCATCGAGACCATGGGTATGAGCCTTCCGTACAGTTCTTCAACCCCTGCTGAAGACCCACTAAAGCTAGAGGAATGCCGTCTTGCTGGGAAGTATCTTTTAGAATTGTTAAAGATGGATTTGAAGCCTAAAGACATTATCACTGAGAAATCTTTGCGGAACGCAATGGTCATTGTCATGGCACTTGGTGGGTCTACTAATGCTGTTTTGCATTTAATTGCTATCGCTAGGTCTGTAGGTCTGCAATTAACTCTTGATGATTTTCAGAAGGTCAGTGACCAAGTTCCTTTCCTTGCGGACCTTAAGCCTAGTGGCAAATATGTCATGGAGGATCTGCATAAGATTGGTGGAACACCTGCAGTAATTCATTATCTTCTGGAGCAAGGTCTTCTTGATGGTGATTGTATGACCGTCACTGGGAAAACTCTAGCGGAAAATGCTAAAATCTTCCCTCCTCTGTCCGAAGGAC AGCAAAT AATAAGGCCCCTGGACAACCCAATCAAATCAACTGGTCATATACAAATACTTTATGGCAATCTTGCACCAGAAGGTTCTGTAGCAAAAATTACTGGCAAAGAGGGGATGTTTTTCTCAGGCCCTGCACTAGTGTTTGAGGGTGAAGAATCTATGATTACAGCTATATCAGAAAACCCAGCGAATTTCAAGGGGAAGGTAGTAGTGATACGAGGAGAAGGACCGAAAGGTGGACCAGGGATGCCTGAAATGCTGACTCCAACTAGTGCAATAATGGGTGCTGGTCTTGGGAAGGAGTGTGCCCTGCTGACCGATGGCAGATTTTCTGGAGGATCACATGGATTTGTTGTAGGCCACATTTGTCCTGAAGCACAGGAGGGAGGTCCAATTGGTCTTGTTCAAAACGGTGACAAAATTA CCATTGATGTTGTGAAGAGAGTAATTGATGTTGAACTGACTGAAGC TGAGCTGGAAGAAAGACGGAGGAAA TGGACGCCGCCGCCACACAAGGCTGCCCGTGGAGCGCTTTGGAAGTACACGAAGCTCGTGTCCCCTGCATCAAGAGGATGCGTCACCGATGAGTAGATCCTGCTGCTGCTGCTCGAGTAATAAAAAATAAAAAATAAAAAAGAGGAGGAATAGGAGGAGGTTTTTGAGGAACAGTTTGCATGTAACAGTAGTTCATGGTGGTGATTGGTGAAGGCTGATTGTGATGGTAGTTCCCTTCAATAAAATGGCAGTTTCCTAGGTGCTCAAGCAATGCCGAGGGAACTGCTTGCTGAATAATCCATTGTCTGTTGCTGTGTTGGACAAGTTTTGTCTGAAAATCGCCTGATGCTTGAGAAAAAAAAAA]
[+] EMBL AK058527             [                                       TCATCTCGCCACCCAAAACCCTAAACCTCCCTCCCATTTCCGCCGCCGCCGCCATGCAGTCGCTTGCCCTCACCTCCCCCTCCCTTCCGGCGCCGGCGACCGCATCCGGCCGCCGCCGCCGCCGCCTGGAGCGCATCCGCGCCACCGCGGTGTCCGACGAGCCGAAGCTGAACAAGTACAGCGCGCGCATCACGGAGCCCAAGTCGCAGGGGGCGTCGCAGGCGGTGCTCTACGGCGTGGGGCTCACCGACGCCGACCTCCGCAAGCCGCAGGTGGGCGTCTCCTCCGTCTGGTACGAGGGCAACACCTGCAACATGCACCTTCTCCGCCTCGCCGAGGCCGTCAGGGACGGCGTCCGCGAGGCCGGCATGGTGGCCTTCCGCTTCAACGCCGTCGGGGTCAGCGACGCCATCTCCATGGGCACCCGGGGCATGTGCTACAGCCTCCAGTCGCGCGACCTCATCGCCGACAGCATCGAGACCGTCATGGGCGCGCAGCACTACGACGCCAACATCTCCATTCCTGGATGCGACAAGAACATGCCAGGAACAATAATGGCAATGGGGCGGCTGAACCGACCAAGTATCATGATATATGGTGGAACTATTAAGCCTGGTCATTTTCAGGGTAATTCTTATGACATAGTATCTGCTTTCCAGTGCTATGGAGAATTTGTTACCGGATCAATCAGTGATGAGCAAAGAAAGAATGTGCTCCGCAACTCATGCCCAGGAGCAGGTGCGTGTGGTGGTATGTACACCGCAAATACAATGGCATCCGCCATCGAGACCATGGGTATGAGCCTTCCGTACAGTTCTTCAACCCCTGCTGAAGACCCACTAAAGCTAGAGGAATGCCGTCTTGCTGGGAAGTATCTTTTAGAATTGTTAAAGATGGATTTGAAGCCTAAAGACATTATCACTGAGAAATCTTTGCGGAACGCAATGGTCATTGTCATGGCACTTGGTGGGTCTACTAATGCTGTTTTGCATTTAATTGCTATCGCTAGGTCTGTAGGTCTGCAATTAACTCTTGATGATTTTCAGAAGGTCAGTGACCAAGTTCCTTCCCTTGCGGACCTTAAGCCTAGTGGCAAATATGTCATGGAGGATCTGCATAAGATTGGTGGAACACCTGCAGTAATTCATTATCTTCTGGAGCAAGGTCTTCTTGATGGTGATTGTATGACCGTCACTGGGAAAACTCTAGCGGAAAATGCTAAAATCTTCCCTCCTCTGTCCGAAGGAC AGCAAAT AATAAGGCCCCTGGACAACCCAATCAAATCAACTGGTCATATACAAATACTTTATGGCAATCTTGCACCAGAAGGTTCTGTAGCAAAAATTACTGGCAAAGAGGGGATGTTTTTCTCAGGCCCTGCACTAGTGTTTGAGGGTGAAGAATCTATGATTACAGCTATATCAGAAAACCCAGCGAATTTCAAGGGGAAGGTAGTAGTGATACGAGGAGAAGGACCGAAAGGTGGACCAGGGATGCCTGAAATGCTGACTCCAACTAGTGCAATAATGGGTGCTGGTCTTGGGAAGGAGTGTGCCCTGCTGACCGATGGCAGATTTTCTGGAGGATCACATGGATTTGTTGTAGGCCACATTTGTCCTGAAGCACAGGAGGGAGGTCCAATTGGTCTTGTTCAAAACGGTGACAAAATTA CCATTGATGTTGTGAAGAGAGTAATTGATGTTGAACTGACTGAAGC TGAGCTGGAAGAAAGACGGAGGAAA TGGACGCCGCCGCCACACAAGGCTGCCCGTGGAGCGCTTTGGAAGTACACGAAGCTCGTGTCCCCTGCATCAAGAGGATGCGTCACCGATGAGTAGATCCTGCTGCTGCTG                                                                                                                                                                                                                                                             ]
[+] EMBL C25839               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTTGATGATTTTCAGAAGGTCAGTGACCAAGTTCCTTTCCTTGCGGACCTTAAGCCTAGTGGCAAATATGTCATGGAGGATCTGCATAAGATTGGTGGAACA CTGCAGTAATTCATTATCTTCTGGAGCAAGGTCTTCTTGATGGTGATTGTATGACCGTCACTGGGAAAACTCTAGCGGAAAATGCTAAAATCTTCCCTCCTCTGTCCGAA GACNAG AGATNAATAAGGCCCCTGGACAACCCAATCAAATCAACTGGTCATATACAAATACTTTATGGCAATCTTGCACCAGAAGGTTCTGTAGCAAAAATTACTGGCAAAGAGGGGATGTTTTTCTCAGGCCCTGCACTAGTGTTTGAGGGTNAAGAATCTATGATTACAGCTATATCAG AAACCCAGCG ATTTCAAGGGG AGGTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU032418             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGAGAAGGACCGAAAGGTGGACCAGGGATGCCTGAAATGCTGACTCCAACTAGTGCAATAATGGGTGCTGGTCTTGGGAAGGAGTGTGCCCTGCTGACCGATGGCAGATTTTCTGGAGGATCACATGGATTTGTTGTAGGCCACATTTGTCCTGAAACACAGGAGGGANGTCCAATTGGTCTTGTTCAAAACGGTGACAAAATTACCCATTGATGTTGTNAAAAGAGTAATTGATGTTGNACTNACTTAAGCTTGACCTGGAAGAAAGACGGAGGAAATTGGACGCCGCCGCCAnaa                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU095583             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAATGCTGACTCCAACTAGTGCAATAATGGGTGCTGGTCTTGGGAAGGAGTGTNCCCTGCTGACCGATGGCAGATTTTCTGGAGGATCACATGGATTTGTTGTAGGCCACATTTGTCCTGAAGCACAGGAGGGAGGTCCAATTGGTCTTGTTCAAAACGGTGACAAAATTA CCATTGATGTTGTGAAGAGAGTAATTGATGTTGAACTGACTGAAGC TGAGCTGGAAGAAAGACGGAGGAAA TGGACGCCGCCGCCACACAAGGCTGCCCGTGGAGCGCTTTGGAAGTACACGAAGCTCGTGTCCCCTGCATCAAGAGGATGCGTCACCGATGAGTAGATCCTGCTGCTGCTGCTCGAGTAATAAAAAATAAAAA                                                                                                                                                                                                                                       ]
[+] EMBL AU070913             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTGACTCCAACTAGTGCAATAATGGGTGCTGGTCTTGGGAAGGAGTGTGCCCTGCTGACCGATGGCAGATTTTCTGGAGGATCACATGGATTTGTTGTAGGCCACATTTGTCCTGAAGCACAGGAGGGAGGTCCAATTGGTCTTGTTCAAAACGGTGACAAAATTA CCATTGATGTTGTGAAGAGAGTAATTGATGTTGAACTGACTGAAGC TGAGCTGGAAGAAAGACGGAGGAAA TGGACGCCGCCGCCACACAAGGCTGCCCGTGGAGCGCTTTGGAAGTACACGAAGCTCGTGTCCCCTGCATCAAGAGGATGCGTC                                                                                                                                                                                                                                                                                        ]


>consensus_11179#0 GGCTTCCTCTCGCCGCACCCATCGATATCCATCTCCATCTCATCTCGCCACCCAAAACCC TAAACCTCCCTCCCATTTCCGCCGCCGCCGCCATGCAGTCGCTTGCCCTCACCTCCCCCT CCCTTCCGGCGCCGGCGACCGCATCCGGCCGCCGCCGCCGCCGCCTGGAGCGCATCCGCG CCACCGCGGTGTCCGACGAGCCGAAGCTGAACAAGTACAGCGCGCGCATCACGGAGCCCA AGTCGCAGGGGGCGTCGCAGGCGGTGCTCTACGGCGTGGGGCTCACCGACGCCGACCTCC GCAAGCCGCAGGTGGGCGTCTCCTCCGTCTGGTACGAGGGCAACACCTGCAACATGCACC TTCTCCGCCTCGCCGAGGCCGTCAGGGACGGCGTCCGCGAGGCCGGCATGGTGGCCTTCC GCTTCAACACCGTCGGGGTCAGCGACGCCATCTCCATGGGCACCCGGGGCATGTGCTACA GCCTCCAGTCGCGCGACCTCATCGCCGACAGCATCGAGACCGTCATGGGCGCGCAGCACT ACGACGCCAACATCTCCATTCCTGGATGCGACAAGAACATGCCAGGAACAATAATGGCAA TGGGGCGGCTGAACCGACCAAGTATCATGATATATGGTGGAACTATTAAGCCTGGTCATT TTCAGGGTAATTCTTATGACATAGTATCTGCTTTCCAGTGCTATGGAGAATTTGTTACCG GATCAATCAGTGATGAGCAAAGAAAGAATGTGCTCCGCAACTCATGCCCAGGAGCAGGTG CGTGTGGTGGTATGTACACCGCAAATACAATGGCATCCGCCATCGAGACCATGGGTATGA GCCTTCCGTACAGTTCTTCAACCCCTGCTGAAGACCCACTAAAGCTAGAGGAATGCCGTC TTGCTGGGAAGTATCTTTTAGAATTGTTAAAGATGGATTTGAAGCCTAAAGACATTATCA CTGAGAAATCTTTGCGGAACGCAATGGTCATTGTCATGGCACTTGGTGGGTCTACTAATG CTGTTTTGCATTTAATTGCTATCGCTAGGTCTGTAGGTCTGCAATTAACTCTTGATGATT TTCAGAAGGTCAGTGACCAAGTTCCTTTCCTTGCGGACCTTAAGCCTAGTGGCAAATATG TCATGGAGGATCTGCATAAGATTGGTGGAACACCTGCAGTAATTCATTATCTTCTGGAGC AAGGTCTTCTTGATGGTGATTGTATGACCGTCACTGGGAAAACTCTAGCGGAAAATGCTA AAATCTTCCCTCCTCTGTCCGAAGGACAGCAAATAATAAGGCCCCTGGACAACCCAATCA AATCAACTGGTCATATACAAATACTTTATGGCAATCTTGCACCAGAAGGTTCTGTAGCAA AAATTACTGGCAAAGAGGGGATGTTTTTCTCAGGCCCTGCACTAGTGTTTGAGGGTGAAG AATCTATGATTACAGCTATATCAGAAAACCCAGCGAATTTCAAGGGGAAGGTAGTAGTGA TACGAGGAGAAGGACCGAAAGGTGGACCAGGGATGCCTGAAATGCTGACTCCAACTAGTG CAATAATGGGTGCTGGTCTTGGGAAGGAGTGTGCCCTGCTGACCGATGGCAGATTTTCTG GAGGATCACATGGATTTGTTGTAGGCCACATTTGTCCTGAAGCACAGGAGGGAGGTCCAA TTGGTCTTGTTCAAAACGGTGACAAAATTACCATTGATGTTGTGAAGAGAGTAATTGATG TTGAACTGACTGAAGCTGAGCTGGAAGAAAGACGGAGGAAATGGACGCCGCCGCCACACA AGGCTGCCCGTGGAGCGCTTTGGAAGTACACGAAGCTCGTGTCCCCTGCATCAAGAGGAT GCGTCACCGATGAGTAGATCCTGCTGCTGCTGCTCGAGTAATAAAAAATAAAAAATAAAA AAGAGGAGGAATAGGAGGAGGTTTTTGAGGAACAGTTTGCATGTAACAGTAGTTCATGGT GGTGGTTGGTGAAGGCTGATTGTGATGGTAGTTCCCTTCAATAAAATGGCAGTTTCCTAG GTGCTCAAGCAATGCCGAGGGAACTGCTTGCTGAATAATCCATTGTCTGTTGCTGTGTTG GACAAGTTTTGTCTGAAAATCGCCTGATGCTTGAGAAAAAAAAAA



consensusID : consensus_11179#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 671
fasta sequence
                              [TAAGGTGGCCGGGTTCGATTATGCCTGTTTGCCAGAGGCCCACGCCAAGGGGAAGTTTGTTTGTTCCGAGGATAAGGCCCCAAAGGGGGCCCAGGGATGCCTAAATCGTGACTCCAACTAGTGCAATAATGGGTGCTGGTCTTGGGAAAGAGTGGGCCCTTCTGCCCGATGGCAGATTTTCTGGAGGATCCCATGGATTTGTGGTAGGCCCCATTTGTCCTGAAGCCCCGGAGGGGGGTCCAATTGGTCTTGTTCAAAACGGGGACAAAATTCCCATTGATGTTGTGAAGAGAGTAATTGATGTTGAACTGACTGAACCTGACCTGGAAGAAAACCGGAGGAAATGGGCGCCGCCGCCACCCAAGGCTGCCCGTGGAGCGCTTTGGAAGTACACGAAGCTCGTGTCCCCTGCATCAAGAGGATGCGTCCCCGATGAGTAGATCGTGCTGCTGCTGCTCGGGTAATAAAAAATAAAAAATAAAAAAGGGGGGGAATAGGAGGAGGCTTTTGAGGAACAGTTTGCATGTACCCGTAGTTCATGGTGGTGATTGGTGAAGGCTGATTGAGATGGTAGTTCCCTTCAATAAAATGGCAGTTTCCTAGGTGCTCAAGCAATGCCGAGGGAACTGCTTTCTGAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA763553             [TAAGGTGGCCGGGTTCGATTATGCCTGTTTGCCAGAGGCCCACGCCAAGGGGAAGTTTGTTTGTTCCGAGGATAAGGCCCCAAAGGGGGCCCAGGGATGCCTAAATCGTGACTCCAACTAGTGCAATAATGGGTGCTGGTCTTGGGAAAGAGTGGGCCCTTCTGCCCGATGGCAGATTTTCTGGAGGATCCCATGGATTTGTGGTAGGCCCCATTTGTCCTGAAGCCCCGGAGGGGGGTCCAATTGGTCTTGTTCAAAACGGGGACAAAATTCCCATTGATGTTGTGAAGAGAGTAATTGATGTTGAACTGACTGAACCTGACCTGGAAGAAAACCGGAGGAAATGGGCGCCGCCGCCACCCAAGGCTGCCCGTGGAGCGCTTTGGAAGTACACGAAGCTCGTGTCCCCTGCATCAAGAGGATGCGTCCCCGATGAGTAGATCGTGCTGCTGCTGCTCGGGTAATAAAAAATAAAAAATAAAAAAGGGGGGGAATAGGAGGAGGCTTTTGAGGAACAGTTTGCATGTACCCGTAGTTCATGGTGGTGATTGGTGAAGGCTGATTGAGATGGTAGTTCCCTTCAATAAAATGGCAGTTTCCTAGGTGCTCAAGCAATGCCGAGGGAACTGCTTTCTGAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_11179#1 TAAGGTGGCCGGGTTCGATTATGCCTGTTTGCCAGAGGCCCACGCCAAGGGGAAGTTTGT TTGTTCCGAGGATAAGGCCCCAAAGGGGGCCCAGGGATGCCTAAATCGTGACTCCAACTA GTGCAATAATGGGTGCTGGTCTTGGGAAAGAGTGGGCCCTTCTGCCCGATGGCAGATTTT CTGGAGGATCCCATGGATTTGTGGTAGGCCCCATTTGTCCTGAAGCCCCGGAGGGGGGTC CAATTGGTCTTGTTCAAAACGGGGACAAAATTCCCATTGATGTTGTGAAGAGAGTAATTG ATGTTGAACTGACTGAACCTGACCTGGAAGAAAACCGGAGGAAATGGGCGCCGCCGCCAC CCAAGGCTGCCCGTGGAGCGCTTTGGAAGTACACGAAGCTCGTGTCCCCTGCATCAAGAG GATGCGTCCCCGATGAGTAGATCGTGCTGCTGCTGCTCGGGTAATAAAAAATAAAAAATA AAAAAGGGGGGGAATAGGAGGAGGCTTTTGAGGAACAGTTTGCATGTACCCGTAGTTCAT GGTGGTGATTGGTGAAGGCTGATTGAGATGGTAGTTCCCTTCAATAAAATGGCAGTTTCC TAGGTGCTCAAGCAATGCCGAGGGAACTGCTTTCTGAATAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11179#0      GGCTTCCTCTCGCCGCACCCATCGATATCCATCTCCATCTCATCTCGCCACCCAAAACCC 60
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      TAAACCTCCCTCCCATTTCCGCCGCCGCCGCCATGCAGTCGCTTGCCCTCACCTCCCCCT 120
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      CCCTTCCGGCGCCGGCGACCGCATCCGGCCGCCGCCGCCGCCGCCTGGAGCGCATCCGCG 180
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      CCACCGCGGTGTCCGACGAGCCGAAGCTGAACAAGTACAGCGCGCGCATCACGGAGCCCA 240
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      AGTCGCAGGGGGCGTCGCAGGCGGTGCTCTACGGCGTGGGGCTCACCGACGCCGACCTCC 300
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      GCAAGCCGCAGGTGGGCGTCTCCTCCGTCTGGTACGAGGGCAACACCTGCAACATGCACC 360
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      TTCTCCGCCTCGCCGAGGCCGTCAGGGACGGCGTCCGCGAGGCCGGCATGGTGGCCTTCC 420
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      GCTTCAACACCGTCGGGGTCAGCGACGCCATCTCCATGGGCACCCGGGGCATGTGCTACA 480
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      GCCTCCAGTCGCGCGACCTCATCGCCGACAGCATCGAGACCGTCATGGGCGCGCAGCACT 540
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      ACGACGCCAACATCTCCATTCCTGGATGCGACAAGAACATGCCAGGAACAATAATGGCAA 600
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      TGGGGCGGCTGAACCGACCAAGTATCATGATATATGGTGGAACTATTAAGCCTGGTCATT 660
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      TTCAGGGTAATTCTTATGACATAGTATCTGCTTTCCAGTGCTATGGAGAATTTGTTACCG 720
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      GATCAATCAGTGATGAGCAAAGAAAGAATGTGCTCCGCAACTCATGCCCAGGAGCAGGTG 780
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      CGTGTGGTGGTATGTACACCGCAAATACAATGGCATCCGCCATCGAGACCATGGGTATGA 840
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      GCCTTCCGTACAGTTCTTCAACCCCTGCTGAAGACCCACTAAAGCTAGAGGAATGCCGTC 900
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      TTGCTGGGAAGTATCTTTTAGAATTGTTAAAGATGGATTTGAAGCCTAAAGACATTATCA 960
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      CTGAGAAATCTTTGCGGAACGCAATGGTCATTGTCATGGCACTTGGTGGGTCTACTAATG 1020
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      CTGTTTTGCATTTAATTGCTATCGCTAGGTCTGTAGGTCTGCAATTAACTCTTGATGATT 1080
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      TTCAGAAGGTCAGTGACCAAGTTCCTTTCCTTGCGGACCTTAAGCCTAGTGGCAAATATG 1140
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      TCATGGAGGATCTGCATAAGATTGGTGGAACACCTGCAGTAATTCATTATCTTCTGGAGC 1200
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      AAGGTCTTCTTGATGGTGATTGTATGACCGTCACTGGGAAAACTCTAGCGGAAAATGCTA 1260
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      AAATCTTCCCTCCTCTGTCCGAAGGACAGCAAATAATAAGGCCCCTGGACAACCCAATCA 1320
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      AATCAACTGGTCATATACAAATACTTTATGGCAATCTTGCACCAGAAGGTTCTGTAGCAA 1380
consensus_11179#1      ------------------------------------------------------------
                                                                                   

consensus_11179#0      AAATTACTGGCAAAGAGGGGATGTTTTTCTCAGGCCCTGCACTAGTGTTTGAGGGTGAAG 1440
consensus_11179#1      -------------------------------------------------TAAGGTGGCCG 11
                                                                        * ***  *  *

consensus_11179#0      AATCTATGATTACAGCTATATCAGAAAACCCAGCGAATTTCAAGGGGAAGGTAGTAGTGA 1500
consensus_11179#1      GGTT--CGATTATGCCTGTTTGCCAGAGGCCCACG----CCAAGGGGAAGTTTGTT-TGT 64
                         *    *****   ** * *   * *  **  **     ********** * **  ** 

consensus_11179#0      TACGAGGAGAAGGACCGAAAGGTGGACCAGGGATGCCTGAAATGCTGACTCCAACTAGTG 1560
consensus_11179#1      TCCGAGGATAAGGCCCCAAAGGGGGCCCAGGGATGCCT-AAATCGTGACTCCAACTAGTG 123
                       * ****** **** ** ***** ** ************ ****  ***************

consensus_11179#0      CAATAATGGGTGCTGGTCTTGGGAAGGAGTGTGCCCTGCTGACCGATGGCAGATTTTCTG 1620
consensus_11179#1      CAATAATGGGTGCTGGTCTTGGGAAAGAGTGGGCCCTTCTGCCCGATGGCAGATTTTCTG 183
                       ************************* ***** ***** *** ******************

consensus_11179#0      GAGGATCACATGGATTTGTTGTAGGCCACATTTGTCCTGAAGCACAGGAGGGAGGTCCAA 1680
consensus_11179#1      GAGGATCCCATGGATTTGTGGTAGGCCCCATTTGTCCTGAAGCCCCGGAGGGGGGTCCAA 243
                       ******* *********** ******* *************** * ****** *******

consensus_11179#0      TTGGTCTTGTTCAAAACGGTGACAAAATTACCATTGATGTTGTGAAGAGAGTAATTGATG 1740
consensus_11179#1      TTGGTCTTGTTCAAAACGGGGACAAAATTCCCATTGATGTTGTGAAGAGAGTAATTGATG 303
                       ******************* ********* ******************************

consensus_11179#0      TTGAACTGACTGAAGCTGAGCTGGAAGAAAGACGGAGGAAATGGACGCCGCCGCCACACA 1800
consensus_11179#1      TTGAACTGACTGAACCTGACCTGGAAGAAAACCGGAGGAAATGGGCGCCGCCGCCACCCA 363
                       ************** **** **********  ************ ************ **

consensus_11179#0      AGGCTGCCCGTGGAGCGCTTTGGAAGTACACGAAGCTCGTGTCCCCTGCATCAAGAGGAT 1860
consensus_11179#1      AGGCTGCCCGTGGAGCGCTTTGGAAGTACACGAAGCTCGTGTCCCCTGCATCAAGAGGAT 423
                       ************************************************************

consensus_11179#0      GCGTCACCGATGAGTAGATCCTGCTGCTGCTGCTCGAGTAATAAAAAATAAAAAATAAAA 1920
consensus_11179#1      GCGTCCCCGATGAGTAGATCGTGCTGCTGCTGCTCGGGTAATAAAAAATAAAAAATAAAA 483
                       ***** ************** *************** ***********************

consensus_11179#0      AAGAGGAGGAATAGGAGGAGGTTTTTGAGGAACAGTTTGCATGTAACAGTAGTTCATGGT 1980
consensus_11179#1      AAGGGGGGGAATAGGAGGAGGCTTTTGAGGAACAGTTTGCATGTACCCGTAGTTCATGGT 543
                       *** ** ************** *********************** * ************

consensus_11179#0      GGTGGTTGGTGAAGGCTGATTGTGATGGTAGTTCCCTTCAATAAAATGGCAGTTTCCTAG 2040
consensus_11179#1      GGTGATTGGTGAAGGCTGATTGAGATGGTAGTTCCCTTCAATAAAATGGCAGTTTCCTAG 603
                       **** ***************** *************************************

consensus_11179#0      GTGCTCAAGCAATGCCGAGGGAACTGCTTGCTGAATAATCCATTGTCTGTTGCTGTGTTG 2100
consensus_11179#1      GTGCTCAAGCAATGCCGAGGGAACTGCTTTCTGAATAAAAAAAAAAAAAAAAAAAAAAAA 663
                       ***************************** ********   *                  

consensus_11179#0      GACAAGTTTTGTCTGAAAATCGCCTGATGCTTGAGAAAAAAAAAA 2145
consensus_11179#1      AAAAAAAA------------------------------------- 671
                        * **                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)