cluster # 11221

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Oryza sativa
cluster # 11221 cluster # 11221 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11221#0 length = 1749 sequences # 8
consensusID : consensus_11221#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1749
fasta sequence
                              [TTTTCTTCTTTCCATCATCTTATGCTCATGGATCTTTGTTGTAGTGTCCTGGAAAAAGCTCAATTGCATGAGGCGAAGGCTTCCACCTGGACCTCCAAGGTGGCCAATCTTTGGTAACCTTCTCCAGTTGAGCCCTCTTCCCCACAAAGACTTCGCTCGATTCTGCACCAAGTATGGCCCCCTGGTCTATCTTCGTCTTGGAACCATCGATGCCATCACCACTGATGACCCTGAAGTCATCCGTGAGATACTCATCCGGCAAGATGAGGTATTTGCTTCACGGCCTCGGACCTTGGCCGCTGTTCACCTTGCCTATGGGTGCGGTGATGTGGCCCTTGCT-CCGCTGGGG-CCGAAC-TGG-AAGAGGA-TGAGGAGGGTTTGCATGGAGCACTTGC-TGACAACCAAGCGGCTTGAATCTTTTGCTGC-TCACCG-AGCACTGGAGGCTG-AGCACCTCTGTC-AGTTTGTGTGGGCTAAAGCCCAGTCAGGGAAACCTGTGAATCTCAGAGAGGTTCTTGGGGCCTTCTCGATGAACAACGTGACAAGGATGTTGCTAGGGAAACAGTACTTTGGTCTGCAGTCAGCAGGCCCTGGTGAAGCAATGGAGTTCATGCACATCACCCATGAACTGTTCTGGCTGCTGGGCCTGATCTATCTTGGGGACTACTTGCCAGCCTGGAGGTGGCTTGATCCATATGGGTGTGAGAAGAAGATGAGGGAGGTTG-AGAAGAAGGTGGACGAC-TTCCACCAGAAGATTA-TTGATGAGCACAGGAAGGCTAGGGAGGCCAAGAAGAGTGCATCCCTTGATGATGATAACAAAGAAGACATGGACTTTGTTGATGTACTGCTTTCTTTGCCCGGCGAGAACGGAAAAGAGCACATGGACGACGTCGAGATCAAAGCTTTGATGCAGGACATGATTGCTGCTGCCACCGACACATCATCGGTGACCAACGAGTGGGTGATGGCGGAGGTGATCAAGAACC-CCC-GG-GTG-T-CCGCAAGATCCA-GGA-GGA-GCTCGACGGCGTCGTCGGCCGCGGCCGCATGGTGGCGGAGTCGGACCTCGGCCAGCTGACCTACCTCCGGTGCGTCGTCCGCGAGTCCTTCCGGATGCACCCGGCGGGGCCATTCCTGATCCCCCACGAGTCCCTGAAGCCGACGACGATCATGGGCTACGACATCCCGGCGCGGACGAGGATCTTCATCAACACCCACGCGCTCGGCCGGAACACCCGCATCTGGGACGACGTCGACGCGTTCCGGCCGGAGAGGCACCTGCCGGCATCGGCGGACGGCGGCCGGGTGGAGATCAGCCACCTGCCGGACTTCAAGATCCTCCCCTTCAGCGCCGGCAAGCGCAAGTGCCCCGGCGCGCCGCTCGGCGTCATCCTGGTGCTCATGGCGCTCGCCAGGCTCTTCCACTGCTTCGACTGGTCGCCGCCGGACGGCCTCCGCCCCGACGACATCGACACCCAGGAGGTGTACGGCATGACCATGCCCAAGGCCAAGCCGCTCGTCGCCGTCGCCACGCCGCGCCTGCCGCCGCAGATGTACGGTCGCCATGGCAAGCAAGTTTGAGCTAGGCGTCGTGTGGACAATAATGCAGACAGGAGAAGCCGATCGAGCTATGCAGCTTAACGTAATTAAGAGTGAATTAATTCTACATGTATCTATCAAATCAATCACACATGTAGACAGTGACGATGAATGCAAGTGCTGATGAATCAAAGAAATTAAGCATCAGCTGATGAATCTCAC]

[+] EMBL AK106843             [TTTTCTTCTTTCCATCATCTTATGCTCATGGATCTTTGTTGTAGTGTCCTGGAAAAAGCTCAATTGCATGAGGCGAAGGCTTCCACCTGGACCTCCAAGGTGGCCAATCTTTGGTAACCTTCTCCAGTTGGGCCCTCTTCCCCACAAAGACTTCGCTCGATTCTGCACCAAGTATGGCCCCCTGGTCTATCTTCGTCTTGGAACCATCGATGCCATCACCACTGATGACCCTGAAGTCATCCGTGAGATACTCATCCGGCAAGATGAGGTATTTGCTTCACGGCCTCGGACCTTGGCCGCTGTTCACCTTGCCTATGGGTGCGGTGATGTGGCCCTTGCT CCGCTGGGG CCGAAC TGG AAGAGGA TGAGGAGGGTTTGCATGGAGCACTTGC TGACAACCAAGCGGCTTGAATCTTTTGCTGC TCACCG AGCACTGGAGGCTG AGCACCTCTGTC AGTTTGTGTGGGCTAAAGCCCAGTCAGGGAAACCTGTGAATCTCAGAGAGGTTCTTGGGGCCTTCTCGATGAACAACGTGACAAGGATGTTGCTAGGGAAACAGTACTTTGGTCTGCAGTCAGCAGGCCCTGGTGAAGCAATGGAGTTCATGCACATCACCCATGAACTGTTCTGGCTGCTGGGCCTGATCTATCTTGGGGACTACTTGCCAGCCTGGAGGTGGCTTGATCCATATGGGTGTGAGAAGAAGATGAGGGAGGTTG AGAAGAAGGTGGACGAC TTCCACCAGAAGATTA TTGATGAGCACAGGAAGGCTAGGGAGGCCAAGAAGAGTGCATCCCTTGATGATGATAACAAAGAAGACATGGACTTTGTTGATGTACTGCTTTCTTTGCCCGGCGAGAACGGAAAAGAGCACATGGACGACGTCGAGATCAAAGCTTTGATGCAGGACATGATTGCTGCTGCCACCGACACATCATCGGTGACCAACGAGTGGGTGATGGCGGAGGTGATCAAGAACC CCC GG GTGCT CCGCAAGATCCA GGA GGA GCTCGACGGCGTCGTCGGCCGCGGCCGCATGGTGGCGGAGTCGGACCTCGGCCAGCTGACCTACCTCCGGTGCGTCGTCCGCGAGTCCTTCCGGATGCACCCGGCGGGGCCATTCCTGATCCCCCACGAGTCCCTGAAGCCGACGACGATCATGGGCTACGACATCCCGGCGCGGACGAGGATCTTCATCAACACCCACGCGCTCGGCCGGAACACCCGCATCTGGGACGACGTCGACGCGTTCCGGCCGGAGAGGCACCTGCCGGCATCGGCGGACGGCGGCCGGGTGGAGATCAGCCACCTGCCGGACTTCAAGATCCTCCCCTTCAGCGCCGGCAAGCGCAAGTGCCCCGGCGCGCCGCTCGGCGTCATCCTGGTGCTCATGGCGCTCGCCAGGCTCTTCCACTGCTTCGACTGGTCGCCGCCGGACGGCCTCCGCCCCGACGACATCGACACCCAGGAGGTGTACGGCATGACCATGCCCAAGGCCAAGCCGCTCGTCGCCGTCGCCACGCCGCGCCTGCCGCCGCAGATGTACGGTCGCCATGGCAAGCAAGTTTGAGCTAGGCGTCGTGTGGACAATAATGCAGACAGGAGAAGCCGATCGAGCTATGCAGCTTAACGTAATTAAGAGTGAATTAATTCTACATGTATCTATCAAATCAATCACACATGTAGACAGTGACGATGAATGCAAGTGCTGATGAATCAAAGAAATTAAGCATCAGCTGATGAATCTCAC]
[+] EMBL C73739               [     TTCTTTCCATCATCTTATGCTCATGGATCTTTGTTGTAGTGTCCTGGAAAAAGCTCAATTGCATGAGGCGAAGGCTTCCACCTGGACCTCCAAGGTGGCCAATCTTTGGTAACCTTCTCCAGTTGAGCCCTCTTCCCCACAAAGACTTCGCTCGATTCTGCACCAAGTATGGCCCCCTGGTCTATCTTCGTCTTGGAACCATCGATGCCATCACCACTGATGACCCTGAAGTCATCCGTGAGATACTCATCCGGCAAGATGAGGTATTTGCTTCACGGCCTCGGACCTTGGCCGCTGTTCANCTTGCCTATGGGTGCGGTGATGTGGCCCTTGCT CCGCTGGGG CCGAACTTGG AAGAGGA TGAGGAGGGTTTGCATGGAGCACTTGCTTGACAACCAAGCGGCTTGAATCTTTTGCTGCTTAACCG AGCACTTGAGGCTG A                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU064265             [                                    TGTTGTAGTGTCCTGGAAAAAGCTCAATTGCATGAGGCGAAGGCTTCCACCTGGACCTCCAAGGTGGCCAATCTTTGGTAACCTTCTCCAGTTGAGCCCTCTTCCCCACAAAGACTTCGCTCGATTCTGCATCAAGTATGGCCCCCTGGTCTATCTTCGTCTTGGAACCATCGATGCCATCACCACTGATGACCCTGAAGTCATCCGTGAGATACTCATCCGGCAAGATGAGGTATTTGCTTCACGGCCTCGGACCTTGGCCGCTGTTCACCTTGCCTATGGGTGCGGTGATGTGGCCCTTGCT CCGCTGGGG CCGAAC TGG AAGAGGA TGAGGAGGGTTTGCATGGAGCACTTGC TGACAACCAAGCGGCTTGAATCTTTTGCTGC TNACCG AGCACTTGAGGCTN AGCAACTCTGTCAAGTTTGTGTGGGCTAAAGCCag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL C99519               [                                                                                                                                                                                                                                                                                                                                           GCCCCTTCTCCCGCTGGGGCCCAAAC TGGAAAGAGGATTGAGGAGGGTTTGCATGGAGCACTTGC TGACAACCAAGCGGCTTG ATCTTTTGCTGC TCACCGAAGCACTGGAGGCTGAAGCACCTCTGTC AGTTTGTGTGGGCTAAAGCCCAGTCAGGGAAACCTGTGAATCTCAGAGAGGTTCTTGGGGCCTTCTCGATGAACAACGTGACAAGGATGTTGCTAGGGAAACAGTACTTTGGTCTGCAGTCAGCAGGCCCTGGTGAAGCAATGGAGTTCATGCACATCACCCATGAACTGTTCTGGCTGCTGGGCCTGATCTATCTTGGGGACTACTTGCCAGCCTGGAGGTGGCTTGATCCATATGGGTGTGAGAAGAAGATGAGGGAGGTTG AGAAGAAGGTGGACGAC TTCCACCAGAAGATTA TTGATGAGCACAGGAAGGCTAGGGAGGCCAAGAAGAGTGCATCCCTTGATGATGATAACAAAGAAGACATGGACTTTGTTGATGTACTGCTTTCTTTGCCCGGCGAGAACGGAAAAGAGCACATGGACGACGTCGAGATCAAAGCTTTGATGCAGGACATGATTGCTGCTGCCACCGACACATCATCGGTGACCAACGAGTGGGTGATGGCGGAGGTGATCAAGAACC CCC GG GTG T CCGCAAGATCCA GGA GGA GCTCGACGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C73767               [                                                                                                                                                                                                                                                                                                                                                                                                                      AAGCGGCTTGAATCTTTTGCTGC TCACCG AGCACTGGAGGCTG AGCACCTCTGTC AGTTTGTGTGGGCTAAAGCCCAGTCAGGGAAACCTGTGAATCTCAGAGAGGTTCTTGGGGCCTTCTCGATGAACAACGTGACAAGGATGTTGCTAGGGAAACAGTACTTTGGTCTGCAGTCAGCAGGCCCTGGTGAAGCAATGGAGTTCATGCACATCACCCATGAACTGTTCTGGCTGCTGGGCCTGATCTATCTTGGGGACTACTTGCCAGCCTGGAGGTGGCTTGATCCATATGGGTGTGAGAAGAAGATGAGGGAGGTTG AGAAGAAGGTGGACGGCTTTCCACCAGAAGATTATTTGATGAGCACAGGAAGGTTAGGGAGGCCAAGAAGAGTTCATNCCTTGATGATG TTACAAAG AGGCATGG CTTTGTTGA GTACTGtt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU094669             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCTGGTGAAGCAATGGAGTTCATGCACATCACCCATGAACTGTTCTGGCTGCTGGGCCTGATCTATCTTGGGGACTACTTGCCAGCCTGGAGGTGGCTTGATCCATATGGGTGTGAGAAGAAGATGAGGGAGGTTG AGAAGAAGGTGGACGAC TTCCACCAGAAGATTA TTGATGAGCACAGGAAGGCTAGGGAGGCCAAGAAGAGTGCATCCCTTGATGATGATAACAAAGAAGACATGGACTTTGTTGATGTACTGCTTTCTTTGCCCGGCGAGAACGGAAAAGAGCACATGGACGACGTCGAGATCAAAGCTTTGATGCAGGACATGATTGCTGCTGCCACCGACACATCATCGGTGACCAACGAGTGGGTGATGGCGGAGGTGATCAAGAACC CCC GG GTG T CCGCAAGATCCA GGA GGA GCTCGACGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU164173             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTGTAGAAGAAGGTGGACGA  TTCCACCAGAAGATTA TTGATGAGCACAGGAAGGCTAGGGAGGCCAAGAAGAGTGCATCCCTTGATGATGATAACAAAGAAGACATGGACTTTGTTGATGTACTGCTTTCTTTGCCCGGCGAGAACGGAAAAGAGCACATGGACGACGTCGAGATCAAAGCTTTGATGCAGNACATGATTGCTGCTGCCACCGANACATCATCGGTGACCAACGAGTGGGTGATGGCGGAGGTGATCAAGAACCACCCNGGNGTG TCCCGCAAGATCCACGGACGGANGCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU176480             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGCTGACCTACCTCCGGTGCGTCGTCCGCGAGTCCTTCCGGATGCACCCGGCGGGGCCATTCCTGATCCCCCACGAGTCCCTGAAGCCGACGACGATCATGGGCTACGACATCCCGGCGCGGACGAGGATCTTCATCAACACCCACGCGCTCGGCCGGAACACCCGCATCTGGGACGACGTCGACGCGTTCCGGCCGGAGAGGCACCTGCCGGCATCGGCGGACGGCGGCCGGGTGGAGATCAGCCACCTGCCGGACTTCAAGATCCTCCCCTTCAGCGCC                                                                                                                                                                                                                                                                                                                                                                                                                        ]




>consensus_11221#0
TTTTCTTCTTTCCATCATCTTATGCTCATGGATCTTTGTTGTAGTGTCCTGGAAAAAGCT
CAATTGCATGAGGCGAAGGCTTCCACCTGGACCTCCAAGGTGGCCAATCTTTGGTAACCT
TCTCCAGTTGAGCCCTCTTCCCCACAAAGACTTCGCTCGATTCTGCACCAAGTATGGCCC
CCTGGTCTATCTTCGTCTTGGAACCATCGATGCCATCACCACTGATGACCCTGAAGTCAT
CCGTGAGATACTCATCCGGCAAGATGAGGTATTTGCTTCACGGCCTCGGACCTTGGCCGC
TGTTCACCTTGCCTATGGGTGCGGTGATGTGGCCCTTGCTCCGCTGGGGCCGAACTGGAA
GAGGATGAGGAGGGTTTGCATGGAGCACTTGCTGACAACCAAGCGGCTTGAATCTTTTGC
TGCTCACCGAGCACTGGAGGCTGAGCACCTCTGTCAGTTTGTGTGGGCTAAAGCCCAGTC
AGGGAAACCTGTGAATCTCAGAGAGGTTCTTGGGGCCTTCTCGATGAACAACGTGACAAG
GATGTTGCTAGGGAAACAGTACTTTGGTCTGCAGTCAGCAGGCCCTGGTGAAGCAATGGA
GTTCATGCACATCACCCATGAACTGTTCTGGCTGCTGGGCCTGATCTATCTTGGGGACTA
CTTGCCAGCCTGGAGGTGGCTTGATCCATATGGGTGTGAGAAGAAGATGAGGGAGGTTGA
GAAGAAGGTGGACGACTTCCACCAGAAGATTATTGATGAGCACAGGAAGGCTAGGGAGGC
CAAGAAGAGTGCATCCCTTGATGATGATAACAAAGAAGACATGGACTTTGTTGATGTACT
GCTTTCTTTGCCCGGCGAGAACGGAAAAGAGCACATGGACGACGTCGAGATCAAAGCTTT
GATGCAGGACATGATTGCTGCTGCCACCGACACATCATCGGTGACCAACGAGTGGGTGAT
GGCGGAGGTGATCAAGAACCCCCGGGTGTCCGCAAGATCCAGGAGGAGCTCGACGGCGTC
GTCGGCCGCGGCCGCATGGTGGCGGAGTCGGACCTCGGCCAGCTGACCTACCTCCGGTGC
GTCGTCCGCGAGTCCTTCCGGATGCACCCGGCGGGGCCATTCCTGATCCCCCACGAGTCC
CTGAAGCCGACGACGATCATGGGCTACGACATCCCGGCGCGGACGAGGATCTTCATCAAC
ACCCACGCGCTCGGCCGGAACACCCGCATCTGGGACGACGTCGACGCGTTCCGGCCGGAG
AGGCACCTGCCGGCATCGGCGGACGGCGGCCGGGTGGAGATCAGCCACCTGCCGGACTTC
AAGATCCTCCCCTTCAGCGCCGGCAAGCGCAAGTGCCCCGGCGCGCCGCTCGGCGTCATC
CTGGTGCTCATGGCGCTCGCCAGGCTCTTCCACTGCTTCGACTGGTCGCCGCCGGACGGC
CTCCGCCCCGACGACATCGACACCCAGGAGGTGTACGGCATGACCATGCCCAAGGCCAAG
CCGCTCGTCGCCGTCGCCACGCCGCGCCTGCCGCCGCAGATGTACGGTCGCCATGGCAAG
CAAGTTTGAGCTAGGCGTCGTGTGGACAATAATGCAGACAGGAGAAGCCGATCGAGCTAT
GCAGCTTAACGTAATTAAGAGTGAATTAATTCTACATGTATCTATCAAATCAATCACACA
TGTAGACAGTGACGATGAATGCAAGTGCTGATGAATCAAAGAAATTAAGCATCAGCTGAT
GAATCTCAC
clustalw multiple alignements is not computed in this case