These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11227#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2198 fasta sequence [CCAGTGCCGCCGCTTCCTAGGCAGCGCCGGCGACGCCGCCACTCTCCCTAGCGCCGGCTACCGCGCCCCACTCCGGCGACCCCTCAAGCAGATGTCCCGCAGCCGCGAATCGGTTTCTTGGCTCCACGCTTCTCTGCCCCTAAGCTAAACCTAACTTCCAACCTCCTCAATCCTAAATGCAGCCGCCGGCAAAACTCCGGCGAGGTAAGGATTCAGAGGAAGTTCCCAGGCCCCTACCGCTGCTACCACTTCGATTCCTCCCTTCTATCTCCTTTTCCCTGATCTCTAGTGTGTTATACTGGTAAGGTGTTCTTTCCCTTATGATTTATGGTTGTGATGCACTGATGATACTTGGAGACTAATCCTAATGATCAACTTGATGACTCTATGCTATTGATTGTATTTACTAGTTTTAGGGTTCTAGATCAATTCATTTGCTAGATTGGATGATGCCTGTATGCCCATGATGAATGAATGCTCATATGAATATATCTTATGAAAATGCAGGACTGAAATTAAAAGCACACTAACATGATCAAGTCCCTATGGATATTACTGCTTCCTGATAATTCGTAAGCTACTACTAATTTTGCACTTAAACTGAAAAAAATGAAGATTTACATATGCACATTTTACACATATAAATCCCATAGAATTAGTAAACTCATGCATTGTTTATCCTTGATATTACTAGTGTCCAGATTTTCATCTCTATATGCTTGTGTGATTAATAACCAAATTTATACATTATTTAATTACAGTGGTTGATGAGGACATGGATTAAGCTATTGGTCAACTAATTATATACATATCCACTTGATTCAGATGCTATGCTCTAACCTCTTCTCTAGATTATTTTCTGTAAGAACCTATGGTTTTCTGTTTGGTATCCTTAATTGCTCAGTTCTATTCTTTTTACTAAAACCTGCTGCTACATGATCTTCTATATTTTAATCTGAAATACCAGTGCTTCCTGAACTTGGTATTATATATAAATGAATGTTTCACCCTAAATCCAATTATATGGTGATTCTATACAATCTAAAATATATACTACTGTTTACTAATTGAACTAGCCTAATTGATAGAGTTGTTATGGTCCTTATGTTTCTTGATAAATTGAATATGTGCTAGGGTTCAGATACTAATTTCCAAGTCCATGGCTAAATCTAAAATCTGATTTTATCTATATGTCAAGAATATCAATATTTGTACTATGAATAAAGATCTGCAGTTACTAAATTTGATAAAGACATAAGACTGATGATATCTTTATATACATTCTACTGTTTCTTGATTTATCACCTGAGCACCTGTTTATCTATAGTAAAATTTTAGTTACACAAACCGTTCTGAAGATCAAACTATTAATGTGAATATTTTACTGAATCAGAGATGTTCTGGTTCAGCTTCTAATGGATGCAAATGCAACACCCAAGGCCTACACATACTAGTATATGCACAGATCAACATAGCTGCCATCTCCTGAGGTTCATTTTTCAGGTTTAATGCATATAACTAAATTACCTTATTTGATGGTTCTACTGTGGCTGTGGAAGACTAATGACCGTGTGACTCTCCTCTGGTTCTACAGCTTCTTTTGAAATTGGTCAGGGTGTTGCTCCTCCTCTTGTTTACTGCTGCCCTTCCGGATCTGCTACTTGTTTCTCCTCTTTAAATTGAAACCCCTTGCTCTTCTTGAAACACATGCATCCCCTTTCTTTTCCTTCTACTCTCTCACCCTGGTTGTTTTTCTATGGCTGCTGCTATTGAGATTTGGTGTAACTGTGGTGCCGGATTACTAGCTACTGCTCTGCTATCTCTCTCTTTTGAGATGGTTTTGCATACNAACTGCTTGCTGCTACTGCTGTTGCGGCTGAGGCTGCTGCGACATGGCTGTGCTCTTGCTGTTGCTACTACTACTGCCACTGCTTGCTGCCTATGCTGATCTGCACGACCAAACCGAGGCTGGTTCACAGATAGCTGAGTTAATATATGTGGGAATTTTTAGTGAAAGCTAAGTGACTCACCTACTTGGGCTAGATGGCTGCTCCTAGCTTTGACACCTATGCAGTGCTTGATCGGTGGAGTATTGTAGGGTTTCACTAATTTTTTTTATTAGATAGCCTGATATAATTAGGTACTTTTGCACTTGAGTCCCTCAGAGTCTCTAATATTGAGGGTTGCTTTGAGATTAG] [+] EMBL AK064491 [CCAGTGCCGCCGCTTCCTAGGCAGCGCCGGCGACGCCGCCACTCTCCCTAGCGCCGGCTACCGCGCCCCACTCCGGCGACCCCTCAAGCAGATGTCCCGCAGCCGCGAATCGGTTTCTTGGCTCCACGCTTCTCTGCCCCTAAGCTAAACCTAACTTCCAACCTCCTCAATCCTAAATGCAGCCGCCGGCAAAACTCCGGCGAGGTAAGGATTCAGAGGAAGTTCCCAGGCCCCTACCGCTGCTACCACTTCGATTCCTCCCTTCTATCTCCTTTTCCCTGATCTCTAGTGTGTTATACTGGTAAGGTGTTCTTTCCCTTATGATTTATGGTTGTGATGCACTGATGATACTTGGAGACTAATCCTAATGATCAACTTGATGACTCTATGCTATTGATTGTATTTACTAGTTTTAGGGTTCTAGATCAATTCATTTGCTAGATTGGATGATGCCTGTATGCCCATGATGAATGAATGCTCATATGAATATATCTTATGAAAATGCAGGACTGAAATTAAAAGCACACTAACATGATCAAGTCCCTATGGATATTACTGCTTCCTGATAATTCGTAAGCTACTACTAATTTTGCACTTAAACTGAAAAAAATGAAGATTTACATATGCACATTTTACACATATAAATCCCATAGAATTAGTAAACTCATGCATTGTTTATCCTTGATATTACTAGTGTCCAGATTTTCATCTCTATATGCTTGTGTGATTAATAACCAAATTTATACATTATTTAATTACAGTGGTTGATGAGGACATGGATTAAGCTATTGGTCAACTAATTATATACATATCCACTTGATTCAGATGCTATGCTCTAACCTCTTCTCTAGATTATTTTCTGTAAGAACCTATGGTTTTCTGTTTGGTATCCTTAATTGCTCAGTTCTATTCTTTTTACTAAAACCTGCTGCTACATGATCTTCTATATTTTAATCTGAAATACCAGTGCTTCCTGAACTTGGTATTATATATAAATGAATGTTTCACCCTAAATCCAATTATATGGTGATTCTATACAATCTAAAATATATACTACTGTTTACTAATTGAACTAGCCTAATTGATAGAGTTGTTATGGTCCTTATGTTTCTTGATAAATTGAATATGTGCTAGGGTTCAGATACTAATTTCCAAGTCCATGGCTAAATCTAAAATCTGATTTTATCTATATGTCAAGAATATCAATATTTGTACTATGAATAAAGATCTGCAGTTACTAAATTTGATAAAGACATAAGACTGATGATATCTTTATATACATTCTACTGTTTCTTGATTTATCACCTGAGCACCTGTTTATCTATAGTAAAATTTTAGTTACACAAACCGTTCTGAAGATCAAACTATTAATGTGAATATTTTACTGAATCAGAGATGTTCTGGTTCAGCTTCTAATGGATGCAAATGCAACACCCAAGGCCTACACATACTAGTATATGCACAGATCAACATAGCTGCCATCTCCTGAGGTTCATTTTTCAGGTTTAATGCATATAACTAAATTACCTTATTTGATGGTTCTACTGTGGCTGTGGAAGACTAATGACCGTGTGACTCTCCTCTGGTTCTACAGCTTCTTTTGAAATTGGTCAGGGTGTTGCTCCTCCTCTTGTTTACTGCTGCCCTTCCGGATCTGCTACTTGTTTCTCCTCTTTAAATTGAAACCCCTTGCTC ] [+] EMBL CA753961 [ GGTTCTACAGCTTCTTTTGAAATTGGTCAGGGTGTTGCTCCTCCTCTTGTTTACTGCTGCCCTTCCGGATCTGCTACTTGTTTCTCCTCTTTAAATTGAAACCCCTTGCTCTTCTTGAAACACATGCATCCCCTTTCTTTTCCTTCTACTCTCTCACCCTGGTTGTTTTTCTATGGCTGCTGCTATTGAGATTTGGTGTAACTGTGGTGCCGGATTACTAGCTACTGCTCTGCTATCTCTCTCTTTTGAGATGGTTTTGCATACNAACTGCTTGCTGCTACTGCTGTTGCGGCTGAGGCTGCTGCGACATGGCTGTGCTCTTGCTGTTGCTACTACTACTGCCACTGCTTGCTGCCTATGCTGATCTGCACGACCAAACCGAGGCTGGTTCACAGATAGCTGAGTTAATATATGTGGGAATTTTTAGTGAAAGCTAAGTGACTCACCTACTTGGGCTAGATGGCTGCTCCTAGCTTTGACACCTATGCAGTGCTTGATCGGTGGAGTATTGTAGGGTTTCACTAATTTTTTTTATTAGATAGCCTGATATAATTAGGTACTTTTGCACTTGAGTCCCTCAGAGTCTCTAATATTGAGGGTTGCTTTGAGATTAG] consensusID : consensus_11227#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1138 fasta sequence [CTCCAGCGCCGCCGCTTCCTAGGCAGCGCCAGCGACCTCCCCTGCGCCGGCTGCCACACCCCACTCCGGCGACCCCTCTAGCCGTCGCCGGGCTGAATCAGCTTCTTGGCTCCTTACTTCTCTGCCCCTAAGCTAACCCTAGCCTCTGACCTCTTCAACCTAAGATGCAACCGGCGGCCAATTCTGGCGAGATAAGGATTTAGGGAAGTTTCCCAGGCCCCTACCGCTGGATCTACTCTCCTCCCCTATTTTAATTTTTGGTTACCTCTGATGATTCTACCGTGATTGAAAAATATGTGGTCCAGCTCCTCCTTCAGAAATCCAAGTCTTCTCTTCTACTGCTGCTCTTCTGGATCTAAGGTGATTTTGCTAGAACTGAGCTTCTCCACCTTGAGCTTGGTTGATTGTTCCCCCTCCTGAACTGAACCCCCTGCTCTACTTGGAACTCAGGTAATTCTCCTCCTTGGCTCTTGCTCTACTGGTAATACTTGACTGCTTCCTGACAGGATCTGCTACTGGTGATTCTCTTCCTCCTCTTGAGACTAATCCTCTTTCTTGATTTTCGCTCTATCTTGCTTCTTGACCTGAGTTTCATCTCCTCCCATAGTTGGAGTTCATCCAAGAACTGAACACCTCTACTTTTCCTTCAGATTT-GGTTCACCACTCTCTGATTGCTTGGCCATGGTTACTACTACTTGTTGATTCATGTATT-GGTTTGAGCTGGACTTCAGTTGAGCTATTTCTGTCCGGGTGAAGCTAACATTCTAGCTGATTTTCCTAAGCTTGGTTCTATGATTCTAACTACTACT-GCCGCAGCTGCTGCTATTGCTCTACTGCGGTAGGTGCCTGAGGTGGTTTTCCGGCCGATGCAACCGAGGCTGGGGTTCACTGAATAGCTTGGTTGATATATATGTGAATTTGGTGAAGACTAGGTGACTCACCTACTTTAGTTTTGGTGGTTGTTTCACTGACTGACACCTAAGCAGTGCTTGATCGGTGGAGTAATGTGGGATTTCCCTAAATTTTTCTAGTTACATAAATTTTGATACAATTAGGTACTTTTGCACTTGAGTCCCTCGGGGTCTCTAAAATTGAAGTTTACTCTGAGATTAGGGACTGATTTGTAATTGTTCTAGAA] [+] EMBL CA767091 [CTCCAGCGCCGCCGCTTCCTAGGCAGCGCCAGCGACCTCCCCTGCGCCGGCTGCCACACCCCACTCCGGCGACCCCTCTAGCCGTCGCCGGGCTGAATCAGCTTCTTGGCTCCTTACTTCTCTGCCCCTAAGCTAACCCTAGCCTCTGACCTCTTCAACCTAAGATGCAACCGGCGGCCAATTCTGGCGAGATAAGGATTTAGGGAAGTTTCCCAGGCCCCTACCGCTGGATCTACTCTCCTCCCCTATTTTAATTTTTGGTTACCTCTGATGATTCTACCGTGATTGAAAAATATGTGGTCCAGCTCCTCCTTCAGAAATCCAAGTCTTCTCTTCTACTGCTGCTCTTCTGGATCTAAGGTGATTTTGCTAGAACTGAGCTTCTCCACCTTGAGCTTGGTTGATTGTTCCCCCTCCTGAACTGAACCCCCTGCTCTACTTGGAACTCAGGTAATTCTCCTCCTTGGCTCTTGCTCTACTGGTAATACTTGACTGCTTCCTGACAGGATCTGCTACTGGTGATTCTCTTCCTCCTCTTGAGACTAATCCTCTTTCTTGATTTTCGCTCTATCTTGCTTCTTGACCTGAGTTTCATCTCCTCCCATAGTTGGAGTTCATCCAAGAACTGAACACCTCTACTTTTCCTTCAGATTTGGGTTCACCACTCTCTGATTGCTTGGCCATGGGTACTACTACTTGGTGATTCATGNATTGGGTTGGAGCTGGACTTCAGTTGAGCTATTTCTGTCCGGGTGAAGCTAAAATTCTAGCTGATTTTCCTAAGCTTGGNTCTATGANTCTAACTACTACTGGCCGCAGCTGCTGCTATg ] [-] EMBL CA761880 [ TACTTGACTGCTTCCTGACAGGATCTGCTACTGGTGATTCTCTTCCTCCTCTTGAGACTAATCCTCTTTCTTGATTTTCGCTCTATCTTGCTTCTTGACCTGAGTTTCATCTCCTCCCATAGTTGGAGTTCATCCAAGAACTGAACACCTCTACTTTTCCTTCAGATTT GGTTCACCACTCTCTGATTGCTTGGCCATGGTTACTACTACTTGTTGATTCATGTATT GGTTTGAGCTGGACTTCAGTTGAGCTATTTCTGTCCGGGTGAAGCTAACATTCTAGCTGATTTTCCTAAGCTTGGTTCTATGATTCTAACTACTACT GCCGCAGCTGCTGCTATTGCTCTACTGCGGTAGGTGCCTGAGGTGGTTTTCCGGCCGATGCAACCGAGGCTGGGGTTCACTGAATAGCTTGGTTGATATATATGTGAATTTGGTGAAGACTAGGTGACTCACCTACTTTAGTTTTGGTGGTTGTTTCACTGACTGACACCTAAGCAGTGCTTGATCGGTGGAGTAATGTGGGATTTCCCTAAATTTTTCTAGTTACATAAATTTTGATACAATTAGGTACTTTTGCACTTGAGTCCCTCGGGGTCTCTAAAATTGAAGTTTACTCTGAGATTAGGGACTGATTTGTAATTGTTCTAGAA] [-] EMBL CF327118 [ ATTT GGTTCACCACTCTCTGATTGCTTGGCCATGGTTACTACTACTTGTTGATTCATGTATT GGTTTGAGCTGGACTTCAGTTGAGCTATTTCTGTCCGGGTGGAGCTAACATTCTAGCTGATTTTCCTAAGCTTGGTTCTATGATTCTAACTACTACT GCCGCAGCTGCTGCTATTGCTCTACTGCGGTAGGTGCTTGAGGTGGTTTTCCAGCCGATGCAACCGAGGCTGGGGTTCACTGAATAGTTTGGTTGATATATATGTGAATTTGGTGAAGACTAGGTGACTCACCTACTTTAGTTTTGGTGGTTGTTTCACTGACTGACACCTAAGCAGTGCTTGATCGGTGGAGTAATGTGGGATTTCACTAAATTTTTCTAGTTACATAAATTCTGATACAATTAGGTACTTTTGCACTTGAGTCCCTCGGGGTCTCTAAAATTGAAGTTTACTCTGAGATTAGGGACTGATTTGTAATTGTTCTAGAA] consensusID : consensus_11227#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1119 fasta sequence [TCCTCGTTCTCCCCTTCTCTCCCTCACGGCTCACGCTCTCCCAGTGCCGCCGCTTCTTAGGCAGCGCCGGCGACGCCGCCGCTCTCCCTAGCGCCGGCTACCGCGCCCCACTCCGGCGACCCCTCAAGCAGATGTCCCGCAGCCGCGAATCGGTTTATTGGCTCCACGCTTCTCTGCCCCTAAGCTAACCCCAGCCACCAGTCTCCTGCTGCTGCTGCCGCCGTGGAGATGGCTGGTGGAAACACAGCGCAACTCCGGTGGCTGCATCCCTTTCCCCCATAGGATCTACTCTCCTCCCCTATTTTAATTTTTTGGTTACCTCGGTTGATTCTACCGTGATTGAAAAATGTGTGGTTCAGCTCCTCCTCCAGAACTCCAAGTCTTCTCTTCTACTGCTGCTCTTCTGGATCTAAGGTGATTTTGCTAGAACTGAGCTTCTCCACCTTGAGCTTGACTGATTGTTTCCCCCCTCTTGAACTGAACCCCCCATGCTCTACTTGGAACTCAGGTAATTCTCCTCCTTGGCTCTTGCTCTACT-GGTAATATTTGACTGC-TTCCTGACATCTTCCTTGATC-TGCTTCTGGTGATTCTCT-TCCTCCTCTTCAGACTGATCCTCTTGCTTGATTTTCGCTCCATCTTGCTTCTTGACCTGAGTTTCATCTCTTCCTAGAGCTGAAACCCTTCTTCATCCAAGAACTAAACAACCCTGCTTCTCCTTCAGATTTGGTTTTCCTCTCTCTGATTACTTGGCCATGGTTACTACTACTGTTGGTTCATGTATTGGTTTGAGCTGGACTTCAGTTGAGCTATTTCTCTCTGGGTGGAGCTAACACTTAAGCTAATTTTTCCTGGAGCTTGGTTCTATGGTTGTAACTACTACTGCCGCAGCTGCTGCTTGTTTTGGTTTGCACGACCAACCCGAGACTTGGGTTGGAAATGATTCACA-CAAATTATTTTATCAATGATAAATATTGTACTGGTGATTCACCTGCTTGCATGGCTATTCCCATCCTGTACTTGTGACACCTCAACATGGCTTGTTCGGTGGGATAACCTAAAGCTATTTGTTAATTTCCTTAATTAATGGAAAATTTGGTAGAGTCTGAGGTGTTTAAAAAA] [+] EMBL AK061382 [TCCTCGTTCTCCCCTTCTCTCCCTCACGGCTCACGCTCTCCCAGTGCCGCCGCTTCTTAGGCAGCGCCGGCGACGCCGCCGCTCTCCCTAGCGCCGGCTACCGCGCCCCACTCCGGCGACCCCTCAAGCAGATGTCCCGCAGCCGCGAATCGGTTTATTGGCTCCACGCTTCTCTGCCCCTAAGCTAACCCCAGCCACCAGTCTCCTGCTGCTGCTGCCGCCGTGGAGATGGCTGGTGGAAACACAGCGCAACTCCGGTGGCTGCATCCCTTTCCCCCATAGGATCTACTCTCCTCCCCTATTTTAATTTTTTGGTTACCTCGGTTGATTCTACCGTGATTGAAAAATGTGTGGTTCAGCTCCTCCTCCAGAACTCCAAGTCTTCTCTTCTACTGCTGCTCTTCTGGATCTAAGGTGATTTTGCTAGAACTGAGCTTCTCCACCTTGAGCTTGACTGATTGTTTCCCCCCTCTTGAACTGAACCCCCCATGCTCTACTTGGAACTCAGGTAATTCTCCTCCTTGGCTCTTGCTCTACT GGTAATATTTGACTGC TTCCTGACATCTTCCTTGATC TGCTTCTGGTGATTCTCT TCCTCCTCTTCAGACTGATCCTCTTGCTTGATTTTCGCTCCATCTTGCTTCTTGACCTGAGTTTCATCTCTTCCTAGAGCTGAAACCCTTCTTCATCCAAGAACTAAACAACCCTGCTTCTCCTTCAGATTTGGTTTTCCTCTCTCTGATTACTTGGCCATGGTTACTACTACTGTTGGTTCATGTATTGGTTTGAGCTGGACTTCAGTTGAGCTATTTCTCTCTGGGTGGAGCTAACACTTAAGCTAATTTTTCCTGGAGCTTGGTTCTATGGTTGTAACTACTACTGCCGCAGCTGCTGCTTGTTTTGGTTTGCACGACCAACCCGAGACTTGGGTTGGAAATGATTCACA CAAATTATTTTATCAATGATAAATATTGTACTGGTGATTCACCTGCTTGCATGGCTATTCCCATCCTGTACTTGTGACACCTCAACATGGCTTGTTCGGTGGGATAACCTAAAGCTATTTGTTAATTTCCTTAATTAATGG ] [+] EMBL BM037845 [ cgcTGGACTGGA CCCCATGCTNTAC TGGACCTCAGGT ATTCTCCCNCCTGGCTCTTGCTCTACTGGGTAATATTT ACTGCTTTCCTGACATCTGTCTTGATCTTGCTTCTGGTGATTCTCTGTCCTCCTCTTCAGACTGATCCTCTTGCTTGATTTTCGCTCCATCTTGCTTCTTGACCTGAGTTTCATCTCTTCCTAGAGCTGAAACCCTTCTTCATCCAAGAACTAAACAACCCTGCTTCTCCTTCAGATTTGGTTTTCCTCTCTCTGATTACTTGGCCATGGTTACTACTACTGTTGGTTCATGTATTGGTTTGAGCTGGACTTCAGTTGAGCTATTTCTCTCTGGGTGGAGCTAACACTTAAGCTAATTTTTCCTGGAGCTTGGTTCTATGGTTGTAACTACTACTGCCGCAGCTGCTGCTTGTTTTGGTTTGCACGACCAACCCGAGACTTGGGTTGGAAATGATTCACACCNACNTATTTTATCAATGATAAATATTGTACTGGTGATTCACCTGCTTGCATGGCTATTCCCATCCTGTACTTGTGACACCTCAACATGGCTTGTTCGGTGGGATAACCTAAAGCTATTTGTTAATTTCCTTAATTAATGGAAAATTTGGTAGAGTCTGAGGTGTTTAAAAAA] consensusID : consensus_11227#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 330 fasta sequence [GGCTCCACGCTTCTCTGCCNCTAAGCTAACCCCAGCCACCAGTCTCCTGCTGCTGCAGCCGCCGTGGAAGATGGCTGGTGGAAACACAGCGCAACTCCGGTGGCTGCATCCCTTTCCCCCATAGGGATCTACTCTCCTCCCCTATTTTAATTTTTTGGTTACCTCGGTTGATTCTACCGTGATTGAAAAATGTGTGGTTCANCTCCTCCTCCANAAACTCCAAGTCTTCTCTTCTACTGCTGCTCTTCTGGATCTAAGGTGATTTTGCTANAAACTGAAACTTCTCCACCTTGAAGCTTGACCTCGTGCCGAAATTCGGNNCGATAAAAA] [+] EMBL BE228742 [GGCTCCACGCTTCTCTGCCNCTAAGCTAACCCCAGCCACCAGTCTCCTGCTGCTGCAGCCGCCGTGGAAGATGGCTGGTGGAAACACAGCGCAACTCCGGTGGCTGCATCCCTTTCCCCCATAGGGATCTACTCTCCTCCCCTATTTTAATTTTTTGGTTACCTCGGTTGATTCTACCGTGATTGAAAAATGTGTGGTTCANCTCCTCCTCCANAAACTCCAAGTCTTCTCTTCTACTGCTGCTCTTCTGGATCTAAGGTGATTTTGCTANAAACTGAAACTTCTCCACCTTGAAGCTTGACCTCGTGCCGAAATTCGGNNCGATAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11227#2 TCCTCGTTCTCCCCTTCTCTCCCTCACGGCTCACGCTCTCCCAGTGCCGCCGCTTCTTAG 60 consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 --------------------------------------CTCCAGCGCCGCCGCTTCCTAG 22 consensus_11227#0 ----------------------------------------CCAGTGCCGCCGCTTCCTAG 20 consensus_11227#2 GCAGCGCCGGCGACGCCGCCGCTCTCCCTAGCGCCGGCTACCGCGCCCCACTCCGGCGAC 120 consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 GCAGCGCCAGCGAC---------CTCCCCTGCGCCGGCTGCCACACCCCACTCCGGCGAC 73 consensus_11227#0 GCAGCGCCGGCGACGCCGCCACTCTCCCTAGCGCCGGCTACCGCGCCCCACTCCGGCGAC 80 consensus_11227#2 CCCTCAAGCAGATGTCCCGCAGCCGCGAATCGGTTTATTGGCTCCACGCTTCTCTGCCCC 180 consensus_11227#3 ---------------------------------------GGCTCCACGCTTCTCTGCCNC 21 consensus_11227#1 CCCTCTAGCCGTCGCCGGGC-----TGAATCAGCTTCTTGGCTCCTTACTTCTCTGCCCC 128 consensus_11227#0 CCCTCAAGCAGATGTCCCGCAGCCGCGAATCGGTTTCTTGGCTCCACGCTTCTCTGCCCC 140 ****** ********** * consensus_11227#2 TAAGCTAACCCCAGCCACCAGTCTCCTGCTGCTGCTGCCGCCGTGGA-GATGGC-TGGTG 238 consensus_11227#3 TAAGCTAACCCCAGCCACCAGTCTCCTGCTGCTGCAGCCGCCGTGGAAGATGGC-TGGTG 80 consensus_11227#1 TAAGCTAACCCTAGCCTCTGACCTCTT-CAACCTAAGATGCAACCGGCGGCCAA-TTCTG 186 consensus_11227#0 TAAGCTAAACCTAACTTCCAACCTCCT-CAATCCTAAATGCAGCCGCCGGCAAAACTCCG 199 ******** ** * * * *** * * ** * * * consensus_11227#2 GAAACACAGCGCAACTCCGGTGGCTGCATCCCTTTCCCCCATAGG-ATCTACTC---TCC 294 consensus_11227#3 GAAACACAGCGCAACTCCGGTGGCTGCATCCCTTTCCCCCATAGGGATCTACTC---TCC 137 consensus_11227#1 GCGAGATAA-GGATTTAGGGAAGTTTCCCAGGCCCCTACCGCTGG-ATCTACTC---TCC 241 consensus_11227#0 GCGAGGTAA-GGATTCAGAGGAAGTTCCCAGGCCCCTACCGCTGCTACCACTTCGATTCC 258 * * * * * * * * * ** * * * ** *** consensus_11227#2 TCCCCTATTTTAATTTTTTGGTTACCTCGGTTG-ATTCTACCG----------------- 336 consensus_11227#3 TCCCCTATTTTAATTTTTTGGTTACCTCGGTTG-ATTCTACCG----------------- 179 consensus_11227#1 TCCCCTATTTTAATTTTT-GGTTACCTCTGATG-ATTCTACCG----------------- 282 consensus_11227#0 TCCCTTCTATCTCCTTTTCCCTGATCTCTAGTGTGTTATACTGGTAAGGTGTTCTTTCCC 318 **** * * * **** * * *** ** ** *** * consensus_11227#2 ---TGATTGAAAAATGTGTGGTTCAGCTCCTCCTCCAGAA---CTCCAAGTCTTCTCTTC 390 consensus_11227#3 ---TGATTGAAAAATGTGTGGTTCANCTCCTCCTCCANAAA--CTCCAAGTCTTCTCTTC 234 consensus_11227#1 ---TGATTGAAAAATATGTGGTCCAGCTCCTCCTTCAGAA---ATCCAAGTCTTCTCTTC 336 consensus_11227#0 TTATGATTTATGGTTGTGATGCACTGATGATACTTGGAGACTAATCCTAATGATCAACTT 378 ***** * * ** * * * * ** * *** * * ** * consensus_11227#2 TACTGCTGC-TCTTCTGGATCTAAGGTGATTTTGCTAGAA-CTGAG-CTTCTCCACCTTG 447 consensus_11227#3 TACTGCTGC-TCTTCTGGATCTAAGGTGATTTTGCTANAAACTGAAACTTCTCCACCTTG 293 consensus_11227#1 TACTGCTGC-TCTTCTGGATCTAAGGTGATTTTGCTAGAA-CTGAG-CTTCTCCACCTTG 393 consensus_11227#0 GATGACTCTATGCTATTGATTGTATTTACTAGTTTTAGGGTTCTAGATCAATTCATTTGC 438 * ** * * * *** * * * * ** * * ** * consensus_11227#2 A-GCTTGACTGATTGTTTC--CCCCCTCTTGAACTGAACCCCCCATGC-----TCTACTT 499 consensus_11227#3 AAGCTTGACCTCGTGCCGA--AATTCGGNNCGATAAAAA--------------------- 330 consensus_11227#1 A-GCTTGGTTGATTGTT----CCCCCTCCTGAACTGAACCCCC--TGC-----TCTACTT 441 consensus_11227#0 TAGATTGGATGATGCCTGTATGCCCATGATGAATGAATGCTCATATGAATATATCTTATG 498 * *** * * consensus_11227#2 GGAACTCAGGT----AATTCTCCTCCTTGGCTCTTGCTCTACTGGTAAT--ATTTGACTG 553 consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 GGAACTCAGGT----AATTCTCCTCCTTGGCTCTTGCTCTACTGGTAAT--ACTTGACTG 495 consensus_11227#0 AAAATGCAGGACTGAAATTAAAAGCACACTAACATGATCAAGTCCCTATGGATATTACTG 558 consensus_11227#2 CTTCCTGACATCTTCCTTGATCTGCTTCTGGTGATTCTCTTCCTCCTCTTCAGACTGATC 613 consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 CTTCCTGACAG-------GATCTGCTACTGGTGATTCTCTTCCTCCTCTTGAGACTAATC 548 consensus_11227#0 CTTCCTGATAA-----TTCGTAAGCTACTACTAATTTTGCACTTAAACTGAAAAAAATGA 613 consensus_11227#2 CTCTTGCTTGATTTTCGCTCCATCTTGCTTCTTGACCTGAGTTTCATCTCTTCCTAGAGC 673 consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 CTCTTTCTTGATTTTCGCTCTATCTTGCTTCTTGACCTGAGTTTCATCTCCTCCCATAGT 608 consensus_11227#0 AGATTTACATATGCACATTTTACACATATAAATCCCATAGAATTAGTAAACTCATGCATT 673 consensus_11227#2 TGAAACCCTTCTTCATCCAAGAACTAAACAACCCTGCTTCTCCTTCAGATTTGGTTTTCC 733 consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 TGGAG------TTCATCCAAGAACTGAACACCTCTACTTTTCCTTCAGATTTGGTTCACC 662 consensus_11227#0 GTTTATCCTTGATATTACTAGTGTCCAGATTTTCATCTCTATATGCTTGTGTGATTAATA 733 consensus_11227#2 TCTCTCTGATTACTTGGCCATGGTTACTACTACT-GTTGGTTCATGTATTGGTTTGAGCT 792 consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 ACTCTCTGATTGCTTGGCCATGGTTACTACTACTTGTTGATTCATGTATTGGTTTGAGCT 722 consensus_11227#0 ACCAAATTTATACATTATT-TAATTACAGTGGTTGATGAGGACATGGATTAAGCTATTGG 792 consensus_11227#2 GGACTTCAGTTGAGCTATTTCTCTCTGGGTGGAGC-TAACACTTAAGCTAATTTTTCCTG 851 consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 GGACTTCAGTTGAGCTATTTCTGTCCGGGTGAAGC-TAACATTCTAGCTGATTTTCCT-- 779 consensus_11227#0 TCAACTAATTATATACATATCCACTTGATTCAGATGCTATGCTCTAACCTCTTCTCTAGA 852 consensus_11227#2 GAGCTT-------GGTTCTATGGTTGTAACTACTACTGCCGCAGCTGCT--GCTTGTTTT 902 consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 AAGCTT-------GGTTCTATGATTCTAACTACTACTGCCGCAGCTGCT--GCTATTGCT 830 consensus_11227#0 TTATTTTCTGTAAGAACCTATGGTTTTCTGTTTGGTATCCTTAATTGCTCAGTTCTATTC 912 consensus_11227#2 GGTTTGCACGACCAACCCGAG--------------------ACTTGGGTTGGAAATGATT 942 consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 CTACTGCGGTAGGTGCCTGAGGTGGTTTTCCGGCCGATGCAACCGAGGCTGGGGTTCACT 890 consensus_11227#0 TTTTTACTAAAACCTGCTGCTACATGATCTTCTATATTTTAATCTGAAATACCAGTGCTT 972 consensus_11227#2 CACACAAATTAT-TTTATCAATGATAAATATTGTA-----CTGGTGATT-CACCTGCTTG 995 consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 GAATAGCTTGGT-TGATATATATGTGAATTTGGTGAAGACTAGGTGACT-CACCTACTTT 948 consensus_11227#0 CCTGAACTTGGTATTATATATAAATGAATGTTTCACCCTAAATCCAATTATATGGTGATT 1032 consensus_11227#2 CATGGCTATTCCCATCCTGTACTTGTGACACCTCAACATGGCTTGTTCGGTGGGATAACC 1055 consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 AGTTTTGGTGGTTGTTTCAC-TGACTGACACCTAAGCAGTGCTTGATCGGTGGAGTAATG 1007 consensus_11227#0 CTATACAATCTAAAATATATACTACTGTTTACT-AATTGAACTAGCCTAATTGA-TAGAG 1090 consensus_11227#2 TAAAGCTATTTGTTAATTTCCTTAATTAATGGAAAATTTGGTAGAGTCTGAGGTGTTTAA 1115 consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 TGGGATT--TCCCTAAATTTTTCTAGTTACATAAATTTTGATACAATTAGGTACTTTTGC 1065 consensus_11227#0 TTGTTATGGTCCTTATGTTTCTTGATAAATTGAATATGTGCTAGGGTTCAG-ATACTAAT 1149 consensus_11227#2 AAAA-------------------------------------------------------- 1119 consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 ACTTGAGTCCCTCGGGGTCTCTAAAATTGAAGTTTACTCTGAGATTAGGGACTGATTTGT 1125 consensus_11227#0 TTCCAAGTCCATGGCTAAATCTAAAATCTGATTTTATCTATATGTCAAGAATATCAATAT 1209 consensus_11227#2 ------------------------------------------------------------ consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 AATTGTTCTAGAA----------------------------------------------- 1138 consensus_11227#0 TTGTACTATGAATAAAGATCTGCAGTTACTAAATTTGATAAAGACATAAGACTGATGATA 1269 consensus_11227#2 ------------------------------------------------------------ consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 ------------------------------------------------------------ consensus_11227#0 TCTTTATATACATTCTACTGTTTCTTGATTTATCACCTGAGCACCTGTTTATCTATAGTA 1329 consensus_11227#2 ------------------------------------------------------------ consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 ------------------------------------------------------------ consensus_11227#0 AAATTTTAGTTACACAAACCGTTCTGAAGATCAAACTATTAATGTGAATATTTTACTGAA 1389 consensus_11227#2 ------------------------------------------------------------ consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 ------------------------------------------------------------ consensus_11227#0 TCAGAGATGTTCTGGTTCAGCTTCTAATGGATGCAAATGCAACACCCAAGGCCTACACAT 1449 consensus_11227#2 ------------------------------------------------------------ consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 ------------------------------------------------------------ consensus_11227#0 ACTAGTATATGCACAGATCAACATAGCTGCCATCTCCTGAGGTTCATTTTTCAGGTTTAA 1509 consensus_11227#2 ------------------------------------------------------------ consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 ------------------------------------------------------------ consensus_11227#0 TGCATATAACTAAATTACCTTATTTGATGGTTCTACTGTGGCTGTGGAAGACTAATGACC 1569 consensus_11227#2 ------------------------------------------------------------ consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 ------------------------------------------------------------ consensus_11227#0 GTGTGACTCTCCTCTGGTTCTACAGCTTCTTTTGAAATTGGTCAGGGTGTTGCTCCTCCT 1629 consensus_11227#2 ------------------------------------------------------------ consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 ------------------------------------------------------------ consensus_11227#0 CTTGTTTACTGCTGCCCTTCCGGATCTGCTACTTGTTTCTCCTCTTTAAATTGAAACCCC 1689 consensus_11227#2 ------------------------------------------------------------ consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 ------------------------------------------------------------ consensus_11227#0 TTGCTCTTCTTGAAACACATGCATCCCCTTTCTTTTCCTTCTACTCTCTCACCCTGGTTG 1749 consensus_11227#2 ------------------------------------------------------------ consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 ------------------------------------------------------------ consensus_11227#0 TTTTTCTATGGCTGCTGCTATTGAGATTTGGTGTAACTGTGGTGCCGGATTACTAGCTAC 1809 consensus_11227#2 ------------------------------------------------------------ consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 ------------------------------------------------------------ consensus_11227#0 TGCTCTGCTATCTCTCTCTTTTGAGATGGTTTTGCATACNAACTGCTTGCTGCTACTGCT 1869 consensus_11227#2 ------------------------------------------------------------ consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 ------------------------------------------------------------ consensus_11227#0 GTTGCGGCTGAGGCTGCTGCGACATGGCTGTGCTCTTGCTGTTGCTACTACTACTGCCAC 1929 consensus_11227#2 ------------------------------------------------------------ consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 ------------------------------------------------------------ consensus_11227#0 TGCTTGCTGCCTATGCTGATCTGCACGACCAAACCGAGGCTGGTTCACAGATAGCTGAGT 1989 consensus_11227#2 ------------------------------------------------------------ consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 ------------------------------------------------------------ consensus_11227#0 TAATATATGTGGGAATTTTTAGTGAAAGCTAAGTGACTCACCTACTTGGGCTAGATGGCT 2049 consensus_11227#2 ------------------------------------------------------------ consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 ------------------------------------------------------------ consensus_11227#0 GCTCCTAGCTTTGACACCTATGCAGTGCTTGATCGGTGGAGTATTGTAGGGTTTCACTAA 2109 consensus_11227#2 ------------------------------------------------------------ consensus_11227#3 ------------------------------------------------------------ consensus_11227#1 ------------------------------------------------------------ consensus_11227#0 TTTTTTTTATTAGATAGCCTGATATAATTAGGTACTTTTGCACTTGAGTCCCTCAGAGTC 2169 consensus_11227#2 ----------------------------- consensus_11227#3 ----------------------------- consensus_11227#1 ----------------------------- consensus_11227#0 TCTAATATTGAGGGTTGCTTTGAGATTAG 2198 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||