These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11230#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2060 fasta sequence [AATCTGCCATGTCGCCGCCATGGATCCCCTAATCGAGGACCCCCCCAACCTAGCGGAGACGAAGAAGAACGAGAAGGGAAGCCCACCGCGTCGCCATCATTAACTCCTCCTCTCCTCTCGTCTCCCTCGAAAGCACCACCGGATCCGACGACCCCCTCCTCCCCTTTCTCCCCTCCTCACGAAACCGCCTCGCCTTCCTCTTCTTTTCTTTTTCGCTCGCTTCGCATCGCTCACATGCCCCTGCCTGCCGCCGCAGACGGGGCGCCATGTCGCGTAGCGGGGTGGAGGTGGTCGTGAGCAGGGGTTGCTCCAGGCTCGTCCTCCCCGGGATGCAGCCTTCCTCCGCCTCCGCCGCTTCCTCCTCCTCCTTCTCGCGCGGCGGACATGGCGGCGGCGGCGACCGGAGGCCGCTGCCCG-ATGGCCCCTTCGCCGGATTGGTCATCTG-CGTCACCGGGCTATCCAAAGAGGCGAGGACTCAGGTGAAGGAGGCG-ACTGAGAGGATGGGAGGCGAGTACAGCGGGAGCCTGCATCCCAAGTGCACCCACCTA-GTGGTTCAGAGCTTCGCCGGCCGCAAGTTTGAGCACGCGGTCAAGCATGGCGCGAAGAATGGCCTCTTTGTTGTAACACTTGGTTGGCTTGTGGATTGCGTGCGGAGGAGCATGAGGTTGGATGAATCGTTATATAGCATCAAGAACATTGGGGAGAATGGAATGCCACTCGGGGAGTTCAACCGGCTTGTCGGCGCTCCTGTTAGTGGGAATTCTTGCCTTCCACCGATGATGTTTCAGGAAAAAACATTTTCAGACACGACCGAAAAGCATCGGCTTCAGACATCTAGAAAAGAACATGACCATGATGAATTTCTCTTTACAAACGACTCGATCTACATTGACCCTGGGATATCTGGTGAAATGAGGAAGAAGGTATCTG-ATGCTGCTACTAGAGAAGGTGCAAAATTGTTGGACCACTGGTTTATTGGCTGTCATGCGACATATGTTGTGTGTGAGGACGCTTCTGTCAAGAGATATGTTGGTCATTCAGACAACATTGTAACTCCACTTTGGATATTGAAAACCGCAAAGGAAAAAGGTTTGCAGCGTCTTGTCCATTTGTCTTCGGACCTGGCTAGGCAGGTTGCCACGATTCTTGAAAATGCCCAGACATTTCAAGAGAATAGAAAAATTGGGGATGTTCCTTCTGTCAATTCAAACTCCAGTGGAGTACCATCAACCCAAGGGGAGATAGATGAAATTCATCAAGAGAGGCAAAAATTTGTTGAAGTAGCAAAGAAAAATGTCCGAGATCGCCGTGCTCGCCGTATGCAGTCATGTGAAGTACCAATCCATCCAATCACGCCTGTGAAACTTATGGAATCAATCTGTTGGACCGTATCTGAGCCAACTACGTCCGCATGCATTTATACGGAGTTTTCATGGTCAGACGATGCCTTTGAGCAACAAAGCACTACTTTCTTCGATGCGAATGGGGATGGCAAGGATGATCAGTCAAGCGATAGTTTCACCCGCCCACTAAGAGAAAGTGAGAAGAGTGAAGTGATCTTTAAGAACCACTTCCTTACCGTACTCTTCCCCATTGATCGTTTTGGTGAGCTTGGACCTTCCTCAAGGACATTCTTCAGCAATGGTGGTTTCACACGCATACAAGTGCTTGATCACATCTACAAC-TTCTACCAGGAAAATATGTCTTCCGATGAGATAAATGTAGCCCTGCAAACGGATTCACGACATGCTGATCGACTTCGCTCGCTGTACGCAAGTACTGAATCAGCAGAAAGAGGTTTTGTAACATTCAAAAGAATTGATTTTTTGGGAAGCCGAAGAAGTTTTGAGGGGCT-AAAACGCCTCAGCAGAGAGAACAATAGCAATGTATATGAGCTTGTGATTAGGGCATAAACTGCACCATACTCGGTGTTATTTAGTCAAATTTGTTTGTTGTTTACAGGTTGATAGTGATGTACTACCATGTATGCACGCCGAATAAAATTGTAGGAGATAATGATATATTTATAGATCAATGAAAAAGATCATGTTGGGCAAAAA] [+] EMBL AK073097 [AATCTGCCATGTCGCCGCCATGGATCCCCTAATCGAGGACCCCCCCAACCTAGCGGAGACGAAGAAGAACGAGAAGGGAAGCCCACCGCGTCGCCATCATTAACTCCTCCTCTCCTCTCGTCTCCCTCGAAAGCACCACCGGATCCGACGACCCCCTCCTCCCCTTTCTCCCCTCCTCACGAAACCGCCTCGCCTTCCTCTTCTTTTCTTTTTCGCTCGCTTCGCATCGCTCACATGCCCCTGCCTGCCGCCGCAGACGGGGCGCCATGTCGCGTAGCGGGGTGGAGGTGGTCGTGAGCAGGGGTTGCTCCAGGCTCGTCCTCCCCGGGATGCAGCCTTCCTCCGCCTCCGCCGCTTCCTCCTCCTCCTTCTCGCGCGGCGGACATGGCGGCGGCGGCGACCGGAGGCCGCTGCCCG ATGGCCCCTTCGCCGGATTGGTCATCTG CGTCACCGGGCTATCCAAAGAGGCGAGGACTCAGGTGAAGGAGGCG ACTGAGAGGATGGGAGGCGAGTACAGCGGGAGCCTGCATCCCAAGTGCACCCACCTA GTGGTTCAGAGCTTCGCCGGCCGCAAGTTTGAGCACGCGGTCAAGCATGGCGCGAAGAATGGCCTCTTTGTTGTAACACTTGGTTGGCTTGTGGATTGCGTGCGGAGGAGCATGAGGTTGGATGAATCGTTATATAGCATCAAGAACATTGGGGAGAATGGAATGCCACTCGGGGAGTTCAACCGGCTTGTCGGCGCTCCTGTTAGTGGGAATTCTTGCCTTCCACCGATGATGTTTCAGGAAAAAACATTTTCAGACACGACCGAAAAGCATCGGCTTCAGACATCTAGAAAAGAACATGACCATGATGAATTTCTCTTTACAAACGACTCGATCTACATTGACCCTGGGATATCTGGTGAAATGAGGAAGAAGGTATCTG ATGCTGCTACTAGAGAAGGTGCAAAATTGTTGGACCACTGGTTTATTGGCTGTCATGCGACATATGTTGTGTGTGAGGACGCTTCTGTCAAGAGATATGTTGGTCATTCAGACAACATTGTAACTCCACTTTGGATATTGAAAACCGCAAAGGAAAAAGGTTTGCAGCGTCTTGTCCATTTGTCTTCGGACCTGGCTAGGCAGGTTGCCACGATTCTTGAAAATGCCCAGACATTTCAAGAGAATAGAAAAATTGGGGATGTTCCTTCTGTCAATTCAAACTCCAGTGGAGTACCATCAACCCAAGGGGAGATAGATGAAATTCATCAAGAGAGGCAAAAATTTGTTGAAGTAGCAAAGAAAAATGTCCGAGATCGCCGTGCTCGCCGTATGCAGTCATGTGAAGTACCAATCCATCCAATCACGCCTGTGAAACTTATGGAATCAATCTGTTGGACCGTATCTGAGCCAACTACGTCCGCATGCATTTATACGGAGTTTTCATGGTCAGACGATGCCTTTGAGCAACAAAGCACTACTTTCTTCGATGCGAATGGGGATGGCAAGGATGATCAGTCAAGCGATAGTTTCACCCGCCCACTAAGAGAAAGTGAGAAGAGTGAAGTGATCTTTAAGAACCACTTCCTTACCGTACTCTTCCCCATTGATCGTTTTGGTGAGCTTGGACCTTCCTCAAGGACATTCTTCAGCAATGGTGGTTTCACACGCATACAAGTGCTTGATCACATCTACAAC TTCTACCAGGAAAATATGTCTTCCGATGAGATAAATGTAGCCCTGCAAACGGATTCACGACATGCTGATCGACTTCGCTCGCTGTACGCAAGTACTGAATCAGCAGAAAGAGGTTTTGTAACATTCAAAAGAATTGATTTTTTGGGAAGCCGAAGAAGTTTTGAGGGGCTAAAAACGCCTCAGCAGAGAGAACAATAGCAATGTATATGAGCTTGTGATTAGGGCATAAACTGCACCATACTCGGTGTTATTTAGTCAAATTTGTTTGTTGTTTACAGGTTGATAGTGATGTACTACCATGTATGCACGCCGAATAAAATTGTAGGAGATAATGATATATTTATAGATCAATGAAAAAGAT ] [+] EMBL CB636917 [ GAAGGGAAGCCCACCGCGTCGCCATCATTAACTCCTCCTCTCCTCTCGTCTCCCTCGAAAGCACCACCGGATCCGACGACCCCCTCCTCCCCTTTCTCCCCTCCTCACGAAACCGCCTCGCCTTCCTCTTCTTTTCTTTTTCGCTCGCTTCGCATCGCTCACATGCCCCTGCCTGCCGCCGCAGACGGGGCGCCATGTCGCGTAGCGGGGTGGAGGTGGTCGTGAGCAGGGGTTGCTCCAGGCTCGTCCTCCCCGGGATGCAGCCTTCCTCCGCCTCCGCCGCTTCCTCCTCCTCCTTCTCGCGCGGCGGACATGGCGGCGGCGGCGACCGGAGGCCGCTGCCCG ATGGCCCCTTCGCCGGATTGGTCATCTG CGTCACCGGGCTATCCAAAGAGGCGAGGACTCAGGTGAAGGAGGCG ACTGANAGGATGGGAGGCGAGTACAGCGGGAGCCTGCATCCCAAGTGCACCCACCTA GTGGTTCAGAGCTTCGCCGGCCGCAAGTTTGAGCACGCGGTCAAGCATGGCGCGAAGAATGGCCTCTTTGTTGTAACACTTGGTTGGCTTGTGGATTGCGTG ] [+] EMBL CB641255 [ GAAGGGAAGCCCACCGCGTGGCCATCATTAACTCCTCCTCTCCTCTCGTCTCCCTCGAAAGCACCACCGGATCCGACGACCCCCTCCTCCCCTTTCTCCCCTCCTCACGAAACCGCCTCGCCTTCCTCTTCTTTTCTTTTTCGCTCGCTTCGCATCGCTCACATGCCCCTGCCTGCCGCCGCAGACGGGGCGCCATGTCGCGTANCGGGGTGGAGGTGGTCGTGAGCAGGGGTTGCTCCAGGCTCGTCCTCCCCGGGATGCAACCTTCCTCCGCCTCCGCCGCTTCCTCCTCCTCCTTCTCGCGCGGCGGACATGGCGGCGGCGGCGACCGGAGGCCGCTGCCCG ATGGCCCCTTCGCCGGATTGGGCATCTGCCGT ACCGGGCTATCCAAA ] [+] EMBL OSC190 [ ACCACCGGATCCGACGACCNCCTCCTCCCCTTTNTCCCCTCCTCACGAAACCGCCTCGCCTTCCTCTTCTTTTCTTTTTCGCTCGCTTCGCATCGCTCACATGCCCCTGCCTGCCGCCGCAGACGGGGCGCCATGTCGCGTA GGGNTGGAGGTNGTCGTGAGCAGGGGTTGCTCCAGGCTCGTCCTCCCCGGGATGCAGCCTTCCTNCGCCTCCGCCGCTTCCTCCTCCTCCTTCTCGCGCNGC GACATNGCGGCGGCGGCGACCGGA GCCG TGCCNGAATGGCCCCT ] [+] EMBL AY224539 [ GCGGCGACCGGAGGCCGCTGCCCG ATGGCCCCTTCGCCGGATTGGTCATCTG CGTCACCGGGCTATCCAAAGA GCGAGGACTCAGGTGAAGGAGGCGAACTGAGAGGATGGGAGGCGAGTACAGCGGGAGCCTGCATCCCAAGTGCACCCACCTACGCGCAGCACAGCTTCGCCGGCCGCAAGTTTGAGCACGCGGTCAAGCATGGCGCGAAGAATGGCCTCTTTGTTGTAACACTTGGTTGGCTTGTGGATTGCGTGCGGAGGAGCATGAGGTTGGATGAATCGTTATATAGCATCAAGAACATTGGGGAGAATGGAATGCCACTCGGGGAGTTCAACCGGCTTGTCGGCGCTCCTGTTAGTGGGAATTCTTGCCTTCCACCGATGATGTTTCAGGAAAAAACATTTTCAGACACGACCGAAAAGCATCGGCTTCAGACATCTAGAAAAGAACATGACCATGATGAATTTCTCTTTACAAACGACTCGATCTACATTGACCCTGGGATATCTGGTGAAATGAGGAAGAA GTATCTGAATGCTGCTACTAGAGAAGGTGCAAAATTGTTGGACCACTGGTTTATTGGCTGTCATGCGACATATGTTGTGTGTGAGGACGCTTCTGTCAAGAGATATGTTGGTCATTCAGACAACATTGTAACTCCACTTTGGATATTGAAAACCGCAAAGGAAAAAGGTTTGCAGCGTCTTGTCCATTTGTCTTCGGACCTGGCTAGGCAGGTTGCCACGATTCTTGAAAATGCCCAGACATTTCAAGAGAATAGAAAAATTGGGGATGTTCCTTCTGTCAATTCAAACTCCAGTGGAGTACCATCAACCCAAGGGGAGATAGATGAAATTCATCAAGAGAGGCAAAAATTTGTTGAAGTAGCAAAGAAAAATGTCCGAGATCGCCGTGCTCGCCGTATGCAGTCATGTGAAGTACCAATCCATCCAATCACGCCTGTGAAACTTATGGAATCAATCTGTTGGACCGTATCTGAGCCAACTACGTCCGCATGCATTTATACGGAGTTTTCATGGTCAGACGATGCCTTTGAGCAACAAAGCACTACTTTCTTCGATGCGAATGGGGATGGCAAGGATGATCAGTCAAGCGATAGTTTCACCCGCCCACTAAGAGAAAGTGAGAAGAGTGAAGTGATCTTTAAGAACCACTTCCTTACCGTACTCTTCCCCATTGATCGTTTTGGTGAGCTTGGACCTTCCTCAAGGACATTCTTCAGCAATGGTGGTTTCACACGCATACAAGTGCTTGATCACATCTACAAC TTCTACCAGGAAAATATGTCTTCCGATGAGATAAATGTAGCCCTGCAAACGGATTCACGACATGCTGATCGACTTCGCTCGCTGTACGCAAGTACTGAATCAGCAGAAAGAGGTTTTGTAACATTCAAAAGAATTGATTTTTTGGGAAGCCGAAGAAGTTTTGAGGGGCT AAAACGCCTCAGCAGAGAGAACAATAGCAATGTATATGAGCTTGTGAT ] [+] EMBL AK063852 [ AACATTTTCAGACACGACCGAAAAGCATCGGCTTCAGACATCTAGAAAAGAACATGACCATGATGAATTTCTCTTTACAAACGACTCGATCTACATTGACCCTGGGATATCTGGTGAAATGAGGAAGAAGGTATCTG ATGCTGCTACTAGAGAAGGTGCAAAATTGTTGGACCACTGGTTTATTGGCTGTCATGCGACATATGTTGTGTGTGAGGACGCTTCTGTCAAGAGATATGTTGGTCATTCAGACAACATTGTAACTCCACTTTGGATATTGAAAACCGCAAAGGAAAAAGGTTTGCAGCGTCTTGTCCATTTGTCTTCGGACCTGGCTAGGCAGGTTGCCACGATTCTTGAAAATGCCCAGACATTTCAAGAGAATAGAAAAATTGGGGATGTTCCTTCTGTCAATTCAAACTCCAGTGGAGTACCATCAACCCAAGGGGAGATAGATGAAATTCATCAAGAGAGGCAAAAATTTGTTGAAGTAGCAAAGAAAAATGTCCGAGATCGCCGTGCTCGCCGTATGCAGTCATGTGAAGTACCAATCCATCCAATCACGCCTGTGAAACTTATGGAATCAATCTGTTGGACCGTATCTGAGCCAACTACGTCCGCATGCATTTATACGGAGTTTTCATGGTCAGACGATGCCTTTGAGCAACAAAGCACTACTTTCTTCGATGCGAATGGGGATGGCAAGGATGATCAGTCAAGCGATAGTTTCACCCGCCCACTAAGAGAAAGTGAGAAGAGTGAAGTGATCTTTAAGAACCACTTCCTTACCGTACTCTTCCCCATTGATCGTTTTGGTGAGCTTGGACCTTCCTCAAGGACATTCTTCAGCAATGGTGGTTTCACACGCATACAAGTGCTTGATCACATCTACAAC TTCTACCAGGAAAATATGTCTTCCGATGAGATAAATGTAGCCCTGCAAACGGATTCACGACATGCTGATCGACTTCGCTCGCTGTACGCAAGTACTGAATCAGCAGAAAGAGGTTTTGTAACATTCAAAAGAATTGATTTTTTGGGAAGCCGAAGAAGTTTTGAGGGGCT AAAACGCCTCAGCAGAGAGAACAATAGCAATGTATATGAGCTTGTGATTAGGGCATAAACTGCACCATACTCGGTGTTATTTAGTCAAATTTGTTTGTTGTTTACAGGTTGATAGTGATGTACTACCATGTATGCACGCCGAATAAAATTGTAGGAGATAATGATATATTTATAGATCAATGAAAAAGATCATGTTGGGCA ] [-] EMBL CB636918 [ GAACCACTTCTTTACCGTACTTTTCCCCATTGATCGTTTTGGTGAGCTTGGACTTTCCTCAAGGACATTCTTCAGCAATGGTGGTTTCACACGCATACAAGTGCTTGATCACATCTACAAC TTCTACCAGGAAAATATGTCTTCCGATGAGATAAATGTAGCCCTGCAAACGGATTCACGACATGCTGATCGACTTCGCTCGCTGTACGCAAGTATTGAATCAGCAGAAAGAGGTTTTGTAACATTCAAAAGAATTGATTTTTTGGGAAGCCGAAGAAGTTTTGAGGGGTT AAAACGCCTCAGCAGAGAGACCAATAGCAATGTATATGAGCTTGTGATTAGGGCATAAACTGCACCATACTCGGTGTTATTTAGTCAAATTTGTTTGTTGTTTACAGGTTGATAGTGATGTACTACCATGTATGCACGCCGAATAAAATTGTAGGAGATAATGATATATTTATAGATCAATGAAAAAGATC ] [+] EMBL AU094371 [ CTTCCTCAAGGACATTCTTCAGCAATGGTGGTTTCACACGCATACAAGTGCTTGATCACATCTACAACTTTCTACCAGGAAAATATGTCTTCCGATGAGATAAATGTAGCCCTGCAAACGGATTCACGACATGCTGATCGACTTCGCTCGCTGTACGCAAGTACTGAATCAGCAGAAAGAGGTTTTGTAACATTCAAAAGAATTGATTTTTTGGGAAGCCGAAGAAGTTTTGAGGGGCT AAAACGCCTCAGCAGAGAGAACAATAGCAATGTATATGAGCTTGTGATTAGGGCATAAACTGCACCATACTCGGTGTTATTTAGTCAAATTTGTTTGTTGTTTACAGGTTGATAGTGATGTACTACCATGTATGCACGCCGAATAAAATTGTAGGAGATAATGATATATTTATAGATCAATGAAAAAGATCATGTTGGGCAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||