cluster # 11232

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Oryza sativa
cluster # 11232 cluster # 11232 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11232#0 length = 1507 sequences # 8
consensusID : consensus_11232#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1507
fasta sequence
                              [GCAAAACCACCCGACGCGACG-GAGGCTTCCACTCCGCCACCGCCACCGCCACCGCCGCGCCTCCCCTCCCCGNCGGCGACGG-TGCCATCCCACCGGCCACCGGGAGCAGGAAGCCAGGAACCCCACCGCACCAGCAGCTTACGCCGCAACCAGCCCATGGGCAGCATCGGCGGCGACGAGGCGGCGGTGCTGCGGGCGGAGGAGTCGGCGTCGGGGGGCGTCGACGTGTGGAGCGACGCCGTCTCCTCCCACGACCCCGACCACCTCCTCGTCATGGTCCACGGCATCCTCGGCAGTAATGCTGACTGGCAATATGCGGCTAACGAATTTGTAAAGCAACTTCCTGATGATGTAATCGTGCACTGCAGTTAGAAAAACATTAATACCTTGACTCTAG-AAGGTGTAGATGTTAT--GGGGGAACGTTTAGCAGATGAGGTGATCGATGTAATCATTCGAAAGCCAGAACTCACTAAGATTTCCTTTCTTGCACACTCTGTTGGAGGATTAGCAGCAAGATATGCAATTGCAAAGCTTTGTAGACATCCAAGTGACACATCCAAGAGTGAAACGAAAGGAACCATCGGCGGGTTGGAAGCAATGAACTTTATAACCGTAGCAACACCTCACCTTGGGTCTCGAGGGAACAATCAGGTTCCCCTTCTCTTTGGGTCCATTGCAATGGAAAATTTTGCTTCTCGTGTGGTCCATTGGATATTTAGGAGAACTGGGAAACATCTTTTTCTCACTGATGATGATGAGGGAGAACCACCATTATTGCAGCGCATGGCTGAAGATTATGGTGATCTTTATTTCATATCTGCTTTGCATGCATTTAGACGACGAGTGGCTTATGCAAATGCCGACTGCGATCACATTGTTGGCTGGAGAACATCGTCTATCAGAAGAAAGACTGAGCTGCCTAAGTGGGAGGAATCGATATCTGAAAAGTACCCCCACATTGTACATGAGGAATACTCAGAAGAACTCGGTGATGAAACATGTCAAAATTCGGCAACAGTTTGTGATTCAGACATATTGGAAGAAAAAATGGTGACAGGACTTCG-ACGAGTATCATGGGAAAAAGTAGATGTTAGCTTCCATACCAGCATGCAGAGATTTGCTGCACACAGCATAATCCAGGTCAAGTACCAGTTTATGAACGAAGGCGCGGATGTCATACAGCACATAATAGACCACTTCCAAGTCTGATAGTTCCTCACTCTTGGAAACATGGAGCAGAGCTGCAGATGGTTTTCCACTCTACTTACAGAAAATTAGAATCCAGATTT-GCTTTGTTGTACACCAAAATCTCCCAGAGCTGTACATAAGAGGAATATCATAGAAAAAAACAAAAATCTTATAAGACTCTTTCAGAGAATGGCCACTGTTGACCTGACAATGTTCATTTCCCCCAGAGAACTTCTCATGTGGAATGTAACAACATTGCATGAGATATACGTCAGGCACCCTTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACT]

[+] EMBL OSC102081            [GCAAAACCACCCGACGCGACG GAGGCTTCCACTCCGCCACCGCCACCGCCACCGCCGCGCCTCCCCTCCCCGNCGGCGACGG TGCCATCCCACCGGCCACCGGGAGCAGGAAGCCAGGAACCCCACCGCACCAGCAGCTTACGCCGCAACCAGCCCATGGGCAGCATCGGCGGCGACGAGGCGGCGGTGCTGCGGGCGGAGGAGTCGGCGTCGGGGGGCGTCGACGTGTGGAGCGACGCCGTCTCCTCCCACGACCCCGACCACCTCCTCGTCATGGTCCACGGCATCCTCGGCAGTAATGCTGACTGGCAATATGCGGCTAACGAATTTGTAAAGCAACTTCCTGATGATGTAATCGTGCACTGCAGTTAGAAAAACATTAATACCTTGACTCTAGAAAGGTGTAGATGTTATTGGGGGGAACGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK106434             [     ACCACCCGACGCGACGCGAGGCTTCCACTCCGCCACCGCCACCGCCACCGCCGCGCCTCCCCTCCCCGCCGGCGACGGCTGCCATCCCACCGGCCACCGGGAGCAGGAAGCCAGGAACCCCACCGCACCAGCAGCTTACGCCGCAACCAGCCCATGGGCAGCATCGGCGGCGACGAGGCGGCGGTGCTGCGGGCGGAGGAGTCGGCGTCGGGGGGCGTCGACGTGTGGAGCGACGCCGTCTCCTCCCACGACCCCGACCACCTCCTCGTCATGGTCCACGGCATCCTCGGCAGTAATGCTGACTGGCAATATGCGGCTAACGAATTTGTAAAGCAACTTCCTGATGATGTAATCGTGCACTGCAGTGAGAAAAACATTAATACCTTGACTCTAG AAGGTGTAGATGTTAT  GGGGGAACGTTTAGCAGATGAGGTGATCGATGTAATCATTCGAAAGCCAGAACTCACTAAGATTTCCTTTCTTGCACACTCTGTTGGAGGATTAGCAGCAAGATATGCAATTGCAAAGCTTTGTAGACATCCAAGTGACACATCCAAGAGTGAAACGAAAGGAACCATCGGCGGGTTGGAAGCAATGAACTTTATAACCGTAGCAACACCTCACCTTGGGTCTCGAGGGAACAATCAGGTTCCCCTTCTCTTTGGGTCCATTGCAATGGAAAATTTTGCTTCTCGTGTGGTCCATTGGATATTTAGGAGAACTGGGAAACATCTTTTTCTCACTGATGATGATGAGGGAGAACCACCATTATTGCAGCGCATGGCTGAAGATTATGGTGATCTTTATTTCATATCTGCTTTGCATGCATTTAGACGACGAGTGGCTTATGCAAATGCCGACTGCGATCACATTGTTGGCTGGAGAACATCGTCTATCAGAAGAAAGACTGAGCTGCCTAAGTGGGAGGAATCGATATCTGAAAAGTACCCCCACATTGTACATGAGGAATACTCAGAAGAACTCGGTGATGAAACATGTCAAAATTCGGCAACAGTTTGTGATTCAGACATATTGGAAGAAAAAATGGTGACAGGACTTCG ACGAGTATCATGGGAAAAAGTAGATGTTAGCTTCCATACCAGCATGCAGAGATTTGCTGCACACAGCATAATCCAGGTCAAGTACCAGTTTATGAACGAAGGCGCGGATGTCATACAGCACATAATAGACCACTTCCAAGTCTGATAGTTCCTCACTCTTGGAAACATGGAGCAGAGCTGCAGATGGTTTTCCACTCTACTTACAGAAAATTAGAATCCAGATTT GCTTTGTTGTACACCAAAATCTCCCAGAGCTGTACATAAGAGGAATATCATAGAAAAAAACAAAAATCTTATAAGACTCTTTCAGAGAATGGCCACTGTTGACCTGACAATGTTCATTTCCCCCAGAGAACTTCTCATGTGGAATGTAACAACATTGCATGAGATATACGTCAGGCACCCT                                     ]
[+] EMBL CF329964             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTGGCTGGAGAACATCGTCTATCAGAAGAAAGACTGAGCTGCCTAAGTGGGAGGAATCGATATCTGAAAAGTACCCCCACATTGTACATGAGGAATACTCAGAAGAACTCGGTGATGAAACATGTCAAAATTCGGCAACAGTTTGTGATTCAGACATATTGGAAGAAAAAATGGTGACAGGACTTCG ACGAGTATCATGGGAAAAAGTAGATGTTAGCTTCCATACCAGCATGCAGAGATTTGCTGCACACAGCATAATCCAGGTCAAGTACCAGTTTATGAACGAAGGCGCGGATGTCATACAGCACATAATAGACCACTTCCAAGTCTGATAGTTCCTCACTCTTGGAAACATGGAGCAGAGCTGCAGATGGTTTTCCACTCTACTTACAGAAAATTAGAATCCAGATTTNGCTTTGTTGTACGCCAAAATCTCCCAGAGCTGTACATAAGAGGAATATCATAGAAAAAAACAAAAATCT                                                                                                                                                     ]
[-] EMBL CF329963             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGGAATACTCAGAAGAACTCGGTGATGAAACATGTCAAAATTCGGCAACAGTTTGTGATTCAGACATATTGGAAGAAAAAATGGTGACAGGACTTCG ACGAGTATCATGGGAAAAAGTAGATGTTAGCTTCCATACCAGCATGCAGAGATTTGCTGCACACAGCATAATCCAGGTCAAGTACCAGTTTATGAACGAAGGCGCGGATGTCATACAGCACATAATAGACCACTTCCAAGTCTGATAGTTCCTCACTCTTGGAAACATGGAGCAGAGCTGCAGATGGTTTTCCACTCTACTTACAGAAAATTAGAATCCAGATTT GCTTTGTTGTACGCCAAAATCTCCCAGAGCTGTACATAAGAGGAATATCATAGAAAAAAACAAAAATCTTATAAGACTCTTTCAGAGAATGGCCACTGTTGACCTGACAATGTTCATTTCCCCCAGAGAACTTCTCATGTGGAATGTAACAACATTGCATGAGATAaaaaaaa                                             ]
[-] EMBL CF325109             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAACATGTCAAAATTCGGCAACAGTTTGTGATTCAGACATATTGGAAGAAAAAATGGTGACAGGACTTCGAACGAGTATCATGGGAAAAAGTAGATGTTAGCTTCCATACCAGCATGCAGAGATTTGCTGCACACAGCATAATCCAGGTCAAGTACCAGTTTATGAACGAAGGCGCGGATGTCATACAGCACATAATAGACCACTTCCAAGTTTGATAGTTCCTCACTTTTGGAAACATGGAGCAAAGCTGCAAATGGTTTTCCACTTTACTTACAGAAAATTAGAATCCAGATTT GCTTTGTTGTACACCAAAATTTCCCAGAGCTGTACATAAGAGGAATATCATAGAAAAAAACAAAAATTTTATAAGACTTTTTCAAAGAATGGCCACTGTTGACCTGACAATGTTCATTTCCCCCAAAGAACTTTTCATGTGGAATGTAACAACATTGCATGAGATATACGTCAGGCACCCTTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACT]
[+] EMBL AU166269             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CATGGGAAAAAGTAGATGTTAGCTTCCATACCAGCATGCAGAGATTTGCTGCACACAGCATAATCCAGGTCAAGTACCAGTTTATGAACGAAGGCGCGGATGTCATACAGCACATAATAGACCACTTCCAAGTCTGATAGTTCCTCACTCTTGGAAACATGGAGCAGAGCTGCAGATGGTTTTCCACTCTACTTACAGAAAATTAGAATCCAGATTT GCTTTGTTGTACACCAAAATCTCCCAGAGCTGTACATAAGAGGAATATCATAGAAAAAAACAAAAATCTTATAAGACTCTTTCAGAGAATGGCCACTGTTGACCTGACAATGTTCATTTCCCCCAGAGAACTTCTCATGTGGAATGTAACAACATTGCATGAGATATACGTCAGGCACCCTTTGAAAACGTAAAAAAA                    ]
[-] EMBL CF325084             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGAAAAAGTAGATGTTAGCTTCCAAACCAGCATGCAGAGATTTGCTGCACACAGCATAATCCAGGTCAAGTACCAGTTTATGAACGAAGGCGCGGATGTCATACAGCACATAATAGACCACTTCCAAATTTGATAGTTCCTCACTCTTGGAAACATGGAGCAAAGCTGCAGATGGTTTTCCACTTTACTTACAGAAAATTAGAATCCAGATTT GCTTTGTTGTACACCAAAATTTCCCAGAGCTGTACATAAGAGGAATATCATAGAAAAAAACAAAAATTTTATAAGACTCTTTCACAGAATGGCCACTGTTAACCTGACAATGTTCATTTCCCCCAAAGAACTTTTCATGTGGAATGTAACAACATTGCATGAGATATACGTCAGGCACCCTTTG AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACT]
[-] EMBL CF325015             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTTGGAAACATGGAGCAAAGCTGCAAATGGTTTTCCCCTTTACTTACAGAAAATTAGAATCCAGATTT GCTTTGTTGTACACCAAAATTTCCCAGAGCTGTACATAAGAGGAATATCATAGAAAAAAACAAAAATTTTATAAGACTTTTTCAAAGAATGGCCACTGTTGACCTGACAATGTTCATTTCCCCCAAAAAACTTTTCATGTGGAATGTAACAACATTGCATTAGATATACGTCAGGCACCCTTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACT]




>consensus_11232#0
GCAAAACCACCCGACGCGACGGAGGCTTCCACTCCGCCACCGCCACCGCCACCGCCGCGC
CTCCCCTCCCCGNCGGCGACGGTGCCATCCCACCGGCCACCGGGAGCAGGAAGCCAGGAA
CCCCACCGCACCAGCAGCTTACGCCGCAACCAGCCCATGGGCAGCATCGGCGGCGACGAG
GCGGCGGTGCTGCGGGCGGAGGAGTCGGCGTCGGGGGGCGTCGACGTGTGGAGCGACGCC
GTCTCCTCCCACGACCCCGACCACCTCCTCGTCATGGTCCACGGCATCCTCGGCAGTAAT
GCTGACTGGCAATATGCGGCTAACGAATTTGTAAAGCAACTTCCTGATGATGTAATCGTG
CACTGCAGTTAGAAAAACATTAATACCTTGACTCTAGAAGGTGTAGATGTTATGGGGGAA
CGTTTAGCAGATGAGGTGATCGATGTAATCATTCGAAAGCCAGAACTCACTAAGATTTCC
TTTCTTGCACACTCTGTTGGAGGATTAGCAGCAAGATATGCAATTGCAAAGCTTTGTAGA
CATCCAAGTGACACATCCAAGAGTGAAACGAAAGGAACCATCGGCGGGTTGGAAGCAATG
AACTTTATAACCGTAGCAACACCTCACCTTGGGTCTCGAGGGAACAATCAGGTTCCCCTT
CTCTTTGGGTCCATTGCAATGGAAAATTTTGCTTCTCGTGTGGTCCATTGGATATTTAGG
AGAACTGGGAAACATCTTTTTCTCACTGATGATGATGAGGGAGAACCACCATTATTGCAG
CGCATGGCTGAAGATTATGGTGATCTTTATTTCATATCTGCTTTGCATGCATTTAGACGA
CGAGTGGCTTATGCAAATGCCGACTGCGATCACATTGTTGGCTGGAGAACATCGTCTATC
AGAAGAAAGACTGAGCTGCCTAAGTGGGAGGAATCGATATCTGAAAAGTACCCCCACATT
GTACATGAGGAATACTCAGAAGAACTCGGTGATGAAACATGTCAAAATTCGGCAACAGTT
TGTGATTCAGACATATTGGAAGAAAAAATGGTGACAGGACTTCGACGAGTATCATGGGAA
AAAGTAGATGTTAGCTTCCATACCAGCATGCAGAGATTTGCTGCACACAGCATAATCCAG
GTCAAGTACCAGTTTATGAACGAAGGCGCGGATGTCATACAGCACATAATAGACCACTTC
CAAGTCTGATAGTTCCTCACTCTTGGAAACATGGAGCAGAGCTGCAGATGGTTTTCCACT
CTACTTACAGAAAATTAGAATCCAGATTTGCTTTGTTGTACACCAAAATCTCCCAGAGCT
GTACATAAGAGGAATATCATAGAAAAAAACAAAAATCTTATAAGACTCTTTCAGAGAATG
GCCACTGTTGACCTGACAATGTTCATTTCCCCCAGAGAACTTCTCATGTGGAATGTAACA
ACATTGCATGAGATATACGTCAGGCACCCTTTGTAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAACT
clustalw multiple alignements is not computed in this case