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Oryza sativa
cluster # 11236 cluster # 11236       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11236#0 length = 2127 sequences # 1  
consensus_11236#1 length = 2073 sequences # 6  
consensus_11236#2 length = 793 sequences # 1  

consensusID : consensus_11236#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2127
fasta sequence
                              [TCAATGCTCTCTCATATTTCTACATGGTCTGTTCTTGGGGAGGTTACACATTCATCATCAACCTTATTCCAATTCATGTACTGTTGTGCATTGTCACTGGTCGTTATTCTTCACGGCTTTACATTGCTTATGCTCCCCTTGTTATACTGGGAACACTTCTGGCAGCCTTAGTACCCGTGGTTGGTTTTAATGCAGTGATGACGTCTGAGCACTTTGCATCATTTCTGGTGTTCATAATCCTTCATGTGGTTGCTCTTGTGTATTACATAAAAGGACTTCTAACTCCCAGGCTGTTCAAAGTAGCTATGACTCTTGTCATAACAGTTGGCTTGGCTGTTTGTTTTGCAGTAATAGCTATACTCATCGCTTTGGTGGCATCTAGCCCCACAAAAGGATGGAGTGGGCGCAGTTTGAGTCTACTTGATCCAACCTATGCAAGCAAGTACATCCCTATTATTGCTAGTGTCAGCGAACATCAACCCCCTACCTGGCCCTCCTATTTCATGGATATCAACGTGTTGGCCTTCTTGATTCCTGCTGGGATCATTTCATGCTTCTTGCCTTTATCTGATGCAAGCTCCTTCGTGGTCTTGTACTTGGTCACCGCAGTATATTTTTCTGGAGTAATGGTGCGGCTTATGCTTGTCCTTGCTCCTGCTGCGTGCATTTTATCTGGAATCGCTCTTTCTGAGGCTTTCGACGTCCTCACAAGATCCGTTAAATATCAGCTATCAAAATTATTTGATGACAGCCCTGCTGCTTCAGGGGATAGTAGTGCAGAGAGTTCTAGCGCTAGTACTGTCTCCACAAATTCAAAAAAATGAGACTAGACCTGAAAAAACTGAAACAGCCCCAAAGGAAAAACCATCAAAGAAAAACCGGAAGAAGGAAAAGGAAGTGGCTGAAAGTGTTCCTGTAAAGCCTAAAAAGGAAAAGAAGCTTTTGGTACTTCCTATGGAGGCATCTGTTTTGGGCATTTTGTTGCTGATCGTGTTAGGTGGTTTCTATGTGGTCCATTGTGTGTGGGCAGCAGCTGAGGCGTACTCAGCTCCTTCAATTGTGTTGACTTCTCGTTCGCGTGATGGATTGCATGTTTTTGATGATTTCCGTGAAGCCTATGCATGGCTCAGCCATAACACAGATGTTGATGACAAGGTTGCGTCCTGGTGGGATTATGGTTATCAAACAACTGCAATGGCCAACAGGACTGTAATTGTAGACAATAATACTTGGAATAATACCCACATAGCAACAGTTGGAACAGCGATGTCATCTCCAGAAAAAGCAGCTTGGGAGATCTTCAATTCTTTAGATGTCAAATATGTCCTTGTTGTATTTGGAGGTCTTGTTGGCTACCCTAGCGATGATATTAACAAGTTCCTTTGGATGGTTCGCATAGGAGGTGGTGTATTCCCTCACATCAAGGAACCTGATTATCTTAGGGATGGTAACTATCGTGTTGATGCTCAAGGCACCCCAACTATGCTGAATTGCCTCATGTACAAGCTTTGCTATTACAGGTTTGACAAACAGAATTCAATAGATAACGTTTAGTTGTCATCAATATTTTTTTTTTTACATTTGGCTGTTTTCCTTGTTTCCTCCAGGTTCGTTGAGACCGATGGCAAAGGTTTTGATAGAGTAAGAGGATATGAAATAGGAAAGAAGCATTTCAAACTAACACATTTTGAGGAGGTTTTCACAACCCACCACTGGATGGTCCGTATATATAAACTGAAACCTCAAAAGAATAGGGTTCGGGGCAAGTTGAAGAAGTTGAAATCTGGCTCCAAAGCTAGCTCAACGAATGCGGCGGGCCGAAAGAAGAACCCATGGCAATAAAAATGAGTAAATGCGAAAAGCGACGTGGCTGCTTGGAATTTGCTTTTGCTAGCTCAACTGCAACTAAGCTCAAAAGAACTAGAAAACCACAGGCCTAGGATTAGAGATTGCTGCGTTATTGCACTCAGTATTTGACACCCCTAATATGTTTTTGGGACCAGCAGGAGTGCTGAAGAAATTTTTGATAGACTGCTCTAAGCTTTTTGGCCCCATTGTTTGCAACACGCGGTTTAGTGTCTTTTATACTCCTTTTGCACTGAAGATGTTTAGGCGGACGTACAATGG]

[+] EMBL AK101078             [TCAATGCTCTCTCATATTTCTACATGGTCTGTTCTTGGGGAGGTTACACATTCATCATCAACCTTATTCCAATTCATGTACTGTTGTGCATTGTCACTGGTCGTTATTCTTCACGGCTTTACATTGCTTATGCTCCCCTTGTTATACTGGGAACACTTCTGGCAGCCTTAGTACCCGTGGTTGGTTTTAATGCAGTGATGACGTCTGAGCACTTTGCATCATTTCTGGTGTTCATAATCCTTCATGTGGTTGCTCTTGTGTATTACATAAAAGGACTTCTAACTCCCAGGCTGTTCAAAGTAGCTATGACTCTTGTCATAACAGTTGGCTTGGCTGTTTGTTTTGCAGTAATAGCTATACTCATCGCTTTGGTGGCATCTAGCCCCACAAAAGGATGGAGTGGGCGCAGTTTGAGTCTACTTGATCCAACCTATGCAAGCAAGTACATCCCTATTATTGCTAGTGTCAGCGAACATCAACCCCCTACCTGGCCCTCCTATTTCATGGATATCAACGTGTTGGCCTTCTTGATTCCTGCTGGGATCATTTCATGCTTCTTGCCTTTATCTGATGCAAGCTCCTTCGTGGTCTTGTACTTGGTCACCGCAGTATATTTTTCTGGAGTAATGGTGCGGCTTATGCTTGTCCTTGCTCCTGCTGCGTGCATTTTATCTGGAATCGCTCTTTCTGAGGCTTTCGACGTCCTCACAAGATCCGTTAAATATCAGCTATCAAAATTATTTGATGACAGCCCTGCTGCTTCAGGGGATAGTAGTGCAGAGAGTTCTAGCGCTAGTACTGTCTCCACAAATTCAAAAAAATGAGACTAGACCTGAAAAAACTGAAACAGCCCCAAAGGAAAAACCATCAAAGAAAAACCGGAAGAAGGAAAAGGAAGTGGCTGAAAGTGTTCCTGTAAAGCCTAAAAAGGAAAAGAAGCTTTTGGTACTTCCTATGGAGGCATCTGTTTTGGGCATTTTGTTGCTGATCGTGTTAGGTGGTTTCTATGTGGTCCATTGTGTGTGGGCAGCAGCTGAGGCGTACTCAGCTCCTTCAATTGTGTTGACTTCTCGTTCGCGTGATGGATTGCATGTTTTTGATGATTTCCGTGAAGCCTATGCATGGCTCAGCCATAACACAGATGTTGATGACAAGGTTGCGTCCTGGTGGGATTATGGTTATCAAACAACTGCAATGGCCAACAGGACTGTAATTGTAGACAATAATACTTGGAATAATACCCACATAGCAACAGTTGGAACAGCGATGTCATCTCCAGAAAAAGCAGCTTGGGAGATCTTCAATTCTTTAGATGTCAAATATGTCCTTGTTGTATTTGGAGGTCTTGTTGGCTACCCTAGCGATGATATTAACAAGTTCCTTTGGATGGTTCGCATAGGAGGTGGTGTATTCCCTCACATCAAGGAACCTGATTATCTTAGGGATGGTAACTATCGTGTTGATGCTCAAGGCACCCCAACTATGCTGAATTGCCTCATGTACAAGCTTTGCTATTACAGGTTTGACAAACAGAATTCAATAGATAACGTTTAGTTGTCATCAATATTTTTTTTTTTACATTTGGCTGTTTTCCTTGTTTCCTCCAGGTTCGTTGAGACCGATGGCAAAGGTTTTGATAGAGTAAGAGGATATGAAATAGGAAAGAAGCATTTCAAACTAACACATTTTGAGGAGGTTTTCACAACCCACCACTGGATGGTCCGTATATATAAACTGAAACCTCAAAAGAATAGGGTTCGGGGCAAGTTGAAGAAGTTGAAATCTGGCTCCAAAGCTAGCTCAACGAATGCGGCGGGCCGAAAGAAGAACCCATGGCAATAAAAATGAGTAAATGCGAAAAGCGACGTGGCTGCTTGGAATTTGCTTTTGCTAGCTCAACTGCAACTAAGCTCAAAAGAACTAGAAAACCACAGGCCTAGGATTAGAGATTGCTGCGTTATTGCACTCAGTATTTGACACCCCTAATATGTTTTTGGGACCAGCAGGAGTGCTGAAGAAATTTTTGATAGACTGCTCTAAGCTTTTTGGCCCCATTGTTTGCAACACGCGGTTTAGTGTCTTTTATACTCCTTTTGCACTGAAGATGTTTAGGCGGACGTACAATGG]


>consensus_11236#0 TCAATGCTCTCTCATATTTCTACATGGTCTGTTCTTGGGGAGGTTACACATTCATCATCA ACCTTATTCCAATTCATGTACTGTTGTGCATTGTCACTGGTCGTTATTCTTCACGGCTTT ACATTGCTTATGCTCCCCTTGTTATACTGGGAACACTTCTGGCAGCCTTAGTACCCGTGG TTGGTTTTAATGCAGTGATGACGTCTGAGCACTTTGCATCATTTCTGGTGTTCATAATCC TTCATGTGGTTGCTCTTGTGTATTACATAAAAGGACTTCTAACTCCCAGGCTGTTCAAAG TAGCTATGACTCTTGTCATAACAGTTGGCTTGGCTGTTTGTTTTGCAGTAATAGCTATAC TCATCGCTTTGGTGGCATCTAGCCCCACAAAAGGATGGAGTGGGCGCAGTTTGAGTCTAC TTGATCCAACCTATGCAAGCAAGTACATCCCTATTATTGCTAGTGTCAGCGAACATCAAC CCCCTACCTGGCCCTCCTATTTCATGGATATCAACGTGTTGGCCTTCTTGATTCCTGCTG GGATCATTTCATGCTTCTTGCCTTTATCTGATGCAAGCTCCTTCGTGGTCTTGTACTTGG TCACCGCAGTATATTTTTCTGGAGTAATGGTGCGGCTTATGCTTGTCCTTGCTCCTGCTG CGTGCATTTTATCTGGAATCGCTCTTTCTGAGGCTTTCGACGTCCTCACAAGATCCGTTA AATATCAGCTATCAAAATTATTTGATGACAGCCCTGCTGCTTCAGGGGATAGTAGTGCAG AGAGTTCTAGCGCTAGTACTGTCTCCACAAATTCAAAAAAATGAGACTAGACCTGAAAAA ACTGAAACAGCCCCAAAGGAAAAACCATCAAAGAAAAACCGGAAGAAGGAAAAGGAAGTG GCTGAAAGTGTTCCTGTAAAGCCTAAAAAGGAAAAGAAGCTTTTGGTACTTCCTATGGAG GCATCTGTTTTGGGCATTTTGTTGCTGATCGTGTTAGGTGGTTTCTATGTGGTCCATTGT GTGTGGGCAGCAGCTGAGGCGTACTCAGCTCCTTCAATTGTGTTGACTTCTCGTTCGCGT GATGGATTGCATGTTTTTGATGATTTCCGTGAAGCCTATGCATGGCTCAGCCATAACACA GATGTTGATGACAAGGTTGCGTCCTGGTGGGATTATGGTTATCAAACAACTGCAATGGCC AACAGGACTGTAATTGTAGACAATAATACTTGGAATAATACCCACATAGCAACAGTTGGA ACAGCGATGTCATCTCCAGAAAAAGCAGCTTGGGAGATCTTCAATTCTTTAGATGTCAAA TATGTCCTTGTTGTATTTGGAGGTCTTGTTGGCTACCCTAGCGATGATATTAACAAGTTC CTTTGGATGGTTCGCATAGGAGGTGGTGTATTCCCTCACATCAAGGAACCTGATTATCTT AGGGATGGTAACTATCGTGTTGATGCTCAAGGCACCCCAACTATGCTGAATTGCCTCATG TACAAGCTTTGCTATTACAGGTTTGACAAACAGAATTCAATAGATAACGTTTAGTTGTCA TCAATATTTTTTTTTTTACATTTGGCTGTTTTCCTTGTTTCCTCCAGGTTCGTTGAGACC GATGGCAAAGGTTTTGATAGAGTAAGAGGATATGAAATAGGAAAGAAGCATTTCAAACTA ACACATTTTGAGGAGGTTTTCACAACCCACCACTGGATGGTCCGTATATATAAACTGAAA CCTCAAAAGAATAGGGTTCGGGGCAAGTTGAAGAAGTTGAAATCTGGCTCCAAAGCTAGC TCAACGAATGCGGCGGGCCGAAAGAAGAACCCATGGCAATAAAAATGAGTAAATGCGAAA AGCGACGTGGCTGCTTGGAATTTGCTTTTGCTAGCTCAACTGCAACTAAGCTCAAAAGAA CTAGAAAACCACAGGCCTAGGATTAGAGATTGCTGCGTTATTGCACTCAGTATTTGACAC CCCTAATATGTTTTTGGGACCAGCAGGAGTGCTGAAGAAATTTTTGATAGACTGCTCTAA GCTTTTTGGCCCCATTGTTTGCAACACGCGGTTTAGTGTCTTTTATACTCCTTTTGCACT GAAGATGTTTAGGCGGACGTACAATGG



consensusID : consensus_11236#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2073
fasta sequence
                              [TCAATGCTCTCTCATATTTCTACATGGTCTGTTCTTGGGGAGGTTACACATTCATCATCAACCTTATTCCAATTCATGTACTGTTGTGCATTGTCACTGGTCGTTATTCTTCACGGCTTTACATTGCTTATGCTCCCCTTGTTATACTGGGAACACTTCTGGCAGCCTTAGTACCCGTGGTTGGTTTTAATGCAGTGATGACGTCTGAGCACTTTGCATCATTTCTGGTGTTCATAATCCTTCATGTGGTTGCTCTTGTGTATTACATAAAAGGACTTCTAACTCCCAGGCTGTTCAAAGTAGCTATGACTCTTGTCATAACAGTTGGCTTGGCTGTTTGTTTTGCAGTAATAGCTATACTCATCGCTTTGGTGGCATCTAGCCCCACAAAAGGATGGAGTGGGCGCAGTTTGAGTCTACTTGATCCAACCTATGCAAGCAAGTACATCCCTATTATTGCTAGTGTCAGCGAACATCAACCCCCTACCTGGCCCTCCTATTTCATGGATATCAACGTGTTGGCCTTCTTGATTCCTGCTGGGATCATTTCATGCTTCTTGCCTTTATCTGATGCAAGCTCCTTCGTGGTCTTGTACTTGGTCACCGCAGTATATTTTTCTGGAGTAATGGTGCGGCTTATGCTTGTCCTTGCTCCTGCTGCGTGCATTTTATCTGGAATCGCTCTTTCTGAGGCTTTCGACGTCCTCACAAGATCCGTTAAATATCAGCTATCAAAA-TTATTTGATGACAGCCCTGCTGCTTCAGGGGATAGTAGTGCAGAGAGTTCTAGCGCTAGTACTGTCTCCACAAATTCAGCAAAAAATGAGACTAGACCTGAAAAAACTGAAACAGCCCCAAAGGAAAAACCATCAAAGAAAAACCGGAAGAAGGAAAAGGAAGTGGCTGAAAGTGTTCCTGTAAAGCCTAAAAAGGAAAAGAAGCTTTTGGTACTTCCTATGGAGGCATCTGTTTTGGGCATTTTGTTGCTGATCGTGTTAGGTGGTTTCTATGTGGTCCATTGTGTGTGGGCAGCAGCTGAGGCGTACTCAGCTCCTTCAATTGTGTTGACTTCTCGTTCGCGTGATGGATTGCATGTTTTTGATGATTTCCGTGAAGCCTATGCATGGCTCAGCCATAACACAGATGTTGATGACAAGGTTGCGTCCTGGTGGGATTATGGTTATCAAACAACTGCAATGGCCAACAGGACTGTAATTGTAGACAATAATACTTGGAATAATACCCACATAGCAACAGTTGGAACAGCGATGTCATCTCCAGAAAAAGCAGCTTGGGAGATCTTCAATTCTTTAGATGTCAAATATGTCCTTGTTGTATTTGGAGGTCTTGTTGGCTACCCTAGCGATGATATTAACAAGTTCCTTTGGATGGTTCGCATAGGAGGTGGTGTATTCCCTCACATCAAGGAACCTGATTATCTTAGGGATGGTAACTATCGTGTTGATGCTCAAGGCACCCCAACTATGCTGAATTGCCTCATGTACAAGCTTTGCTATTACAGGTTCGTTGAGACCGATGGCAAAGGTTTTGATAGAGTAAGAGGATATGAAATAGGAAAGAAGCATTTCAAACTAACACATTTTGAGGAGGTTTTCACAACCCACCACTGGATGGTCCGTATATATAAACTGAAACCTCAAAAGAATAGGGTTCGGGGCAAGTTGAAGAAGTTGAAATCTGGCTCCAAAGCTAGCTCAACGAATGCGGCGGGCCGAAAGAAGAACCCATGGCAATAAAAATGAGTAAATGCGAAAAGCGACGTGGCTGCTTGGAATTTGCTTTTGCTAGCTCAACTGCAACTAAGCTCAAAAGAACTAGAAAACCACAGGCCTAGGATTAGAGATTGCTGCGTTATTGCACTCAGTATTTGACACCCCTAATATGTTTTTGGGACCAGCAGGAGTGCTGAAGAAATTTTTGATAGACTGCTCTAAGCTTTTTGGCCCCATTGTTTGCAACACGCGGTTTAGTGTCTTTTATACTCCTTTTGCACTGAAGATGTTTAGGCGGACGTACAATGGAAGTTTATTTAGAAAAATGAGAACGTGGCTA]

[+] EMBL AK067224             [TCAATGCTCTCTCATATTTCTACATGGTCTGTTCTTGGGGAGGTTACACATTCATCATCAACCTTATTCCAATTCATGTACTGTTGTGCATTGTCACTGGTCGTTATTCTTCACGGCTTTACATTGCTTATGCTCCCCTTGTTATACTGGGAACACTTCTGGCAGCCTTAGTACCCGTGGTTGGTTTTAATGCAGTGATGACGTCTGAGCACTTTGCATCATTTCTGGTGTTCATAATCCTTCATGTGGTTGCTCTTGTGTATTACATAAAAGGACTTCTAACTCCCAGGCTGTTCAAAGTAGCTATGACTCTTGTCATAACAGTTGGCTTGGCTGTTTGTTTTGCAGTAATAGCTATACTCATCGCTTTGGTGGCATCTAGCCCCACAAAAGGATGGAGTGGGCGCAGTTTGAGTCTACTTGATCCAACCTATGCAAGCAAGTACATCCCTATTATTGCTAGTGTCAGCGAACATCAACCCCCTACCTGGCCCTCCTATTTCATGGATATCAACGTGTTGGCCTTCTTGATTCCTGCTGGGATCATTTCATGCTTCTTGCCTTTATCTGATGCAAGCTCCTTCGTGGTCTTGTACTTGGTCACCGCAGTATATTTTTCTGGAGTAATGGTGCGGCTTATGCTTGTCCTTGCTCCTGCTGCGTGCATTTTATCTGGAATCGCTCTTTCTGAGGCTTTCGACGTCCTCACAAGATCCGTTAAATATCAGCTATCAAAA TTATTTGATGACAGCCCTGCTGCTTCAGGGGATAGTAGTGCAGAGAGTTCTAGCGCTAGTACTGTCTCCACAAATTCAGCAAAAAATGAGACTAGACCTGAAAAAACTGAAACAGCCCCAAAGGAAAAACCATCAAAGAAAAACCGGAAGAAGGAAAAGGAAGTGGCTGAAAGTGTTCCTGTAAAGCCTAAAAAGGAAAAGAAGCTTTTGGTACTTCCTATGGAGGCATCTGTTTTGGGCATTTTGTTGCTGATCGTGTTAGGTGGTTTCTATGTGGTCCATTGTGTGTGGGCAGCAGCTGAGGCGTACTCAGCTCCTTCAATTGTGTTGACTTCTCGTTCGCGTGATGGATTGCATGTTTTTGATGATTTCCGTGAAGCCTATGCATGGCTCAGCCATAACACAGATGTTGATGACAAGGTTGCGTCCTGGTGGGATTATGGTTATCAAACAACTGCAATGGCCAACAGGACTGTAATTGTAGACAATAATACTTGGAATAATACCCACATAGCAACAGTTGGAACAGCGATGTCATCTCCAGAAAAAGCAGCTTGGGAGATCTTCAATTCTTTAGATGTCAAATATGTCCTTGTTGTATTTGGAGGTCTTGTTGGCTACCCTAGCGATGATATTAACAAGTTCCTTTGGATGGTTCGCATAGGAGGTGGTGTATTCCCTCACATCAAGGAACCTGATTATCTTAGGGATGGTAACTATCGTGTTGATGCTCAAGGCACCCCAACTATGCTGAATTGCCTCATGTACAAGCTTTGCTATTACAGGTTCGTTGAGACCGATGGCAAAGGTTTTGATAGAGTAAGAGGATATGAAATAGGAAAGAAGCATTTCAAACTAACACATTTTGAGGAGGTTTTCACAACCCACCACTGGATGGTCCGTATATATAAACTGAAACCTCAAAAGAATAGGGTTCGGGGCAAGTTGAAGAAGTTGAAATCTGGCTCCAAAGCTAGCTCAACGAATGCGGCGGGCCGAAAGAAGAACCCATGGCAATAAAAATGAGTAAATGCGAAAAGCGACGTGGCTGCTTGGAATTTGCTTTTGCTAGCTCAACTGCAACTAAGCTCAAAAGAACTAGAAAACCACAGGCCTAGGATTAGAGATTGCTGCGTTATTGCACTCAGTATTTGACACCCCTAATATGTTTTTGGGACCAGCAGGAGTGCTGAAGAAATTTTTGATAGACTGCTCTAAGCTTTTTGGCCCCATTGTTTGCAACACGCGGTTTAGTGTCTTTTATACTCCTTTTGCACTGAAGATGTTTAGGCGGACGTACAATGGAAGTTTATTTAGAAAAATGAGAACGTGGCTA]
[+] EMBL AK070919             [TCAATGCTCTCTCATATTTCTACATGGTCTGTTCTTGGGGAGGTTACACATTCATCATCAACCTTATTCCAATTCATGTACTGTTGTGCATTGTCACTGGTCGTTATTCTTCACGGCTTTACATTGCTTATGCTCCCCTTGTTATACTGGGAACACTTCTGGCAGCCTTAGTACCCGTGGTTGGTTTTAATGCAGTGATGACGTCTGAGCACTTTGCATCATTTCTGGTGTTCATAATCCTTCATGTGGTTGCTCTTGTGTATTACATAAAAGGACTTCTAACTCCCAGGCTGTTCAAAGTAGCTATGACTCTTGTCATAACAGTTGGCTTGGCTGTTTGTTTTGCAGTAATAGCTATACTCATCGCTTTGGTGGCATCTAGCCCCACAAAAGGATGGAGTGGGCGCAGTTTGAGTCTACTTGATCCAACCTATGCAAGCAAGTACATCCCTATTATTGCTAGTGTCAGCGAACATCAACCCCCTACCTGGCCCTCCTATTTCATGGATATCAACGTGTTGGCCTTCTTGATTCCTGCTGGGATCATTTCATGCTTCTTGCCTTTATCTGATGCAAGCTCCTTCGTGGTCTTGTACTTGGTCACCGCAGTATATTTTTCTGGAGTAATGGTGCGGCTTATGCTTGTCCTTGCTCCTGCTGCGTGCATTTTATCTGGAATCGCTCTTTCTGAGGCTTTCGACGTCCTCACAAGATCCGTTAAATATCAGCTATCAAAA TTATTTGATGACAGCCCTGCTGCTTCAGGGGATAGTAGTGCAGAGAGTTCTAGCGCTAGTACTGTCTCCACAAATTCAGCAAAAAATGAGACTAGACCTGAAAAAACTGAAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB648818             [                                                           AACCTTATTGCAATTCATGTACTGTTGTGCATTGTCACTGGTCGTTATTCTTCACGGCTTTACATTGCTTATGCTCCCGTTGTTATACTGGGAACACTTCTGGCAGCCTTAGTACCCGTGGTTGGTTTTAATGCAGTGATGACGTCTGAGCACTTTGCATCATTTCTGGTGTTCATAATCCTTCATGTGGTTGCTCTCGTGTATTACATAAAAGGACTTCTATCTCCCAGGCTGTTCAAAGTAGCTATGACTCTTGTCATAACAGTTGGCTTGGCTGTTTGTTTCGCAGTAATAGCTATACTCATCGCTTTGGTGGCATCTAGCCCCACAAAAGGATGGAGTGGGCGCAGTTTGAGTCTACTTGATCCAACCTATGCAAGCAAGTACATCCCTATTATTGCTAGTGTCAGGGAACATCAACCCCCTACCTGGCCCTCATATTTCATGGATATCAACGTGTTGGCCTTCTGGATTCCTGCTGGGATCATTTCATGCTTTTTGCCTTTATGTGATGCAAGCTCCTTCGTGGTCTTGTACTTGGTCACCGCAGTATATTTTTCTGGAGTAATGGTGCGGCTTATGCTTGTCCTTGCTCGTGGTGGGTGCATTTTATCTGGAATCGCTCTTTGTGAGGCTTTAGAGGTCCTCACAAGATCCGTTAAATATCAGCTATCAAAAGTTATTTGATGACAGCCCTGCTGCTTCAGGGGATAGTAGTGCAGAGAGTTCTAGCGTTAGTACTGTCTCCCCAAATTCAGCAAAAAAggga                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB663559             [                                                                                                                                                                                                                                                                                                                                                            TAATAGCTATACTCATCGCTTTGGTGGCATCTAGCCCCACAAAAGGATGGAGTGGGCGCAGTTTGAGTCTACTTGATCCAACCTATGCAAGCAAGTACATCCCTATTATTGCTAGTGTCAGCGAACATCAACCCCCTACCTGGCCCTCCTATTTCATGGATATCAACGTGTTGGCCTTCTTGATTCCTGCTGGGATCATTTCATGCTTCTTGCCTTTATCTGATGCAAGCTCCTTCGTGGTCTTGTACTTGGTCACCGCAGTATATTTTTCTGGAGTAATGGTGCGGCTTATGCTTGTCCTTGCTCCTGCTGCGTGCATTTTATCTGGAATCGCTCTTTCTGAGGCTTTCGACGTCCTCACAAGATCCGTTAAATATCAGCTATCAAAA TTATTTGATGACAGCCCTGCTGCTTCAGGGGATAGTAGTGCAGAGAGTTCTAGCGCTAGTACTGTCTCCACAAATTCAGCAAAAAATGAGACTAGACCTGAAAAAACTGAAACAGCCCCAAAGGAAAAACCATCAAAGAAAAACCGGAAGAAGGAAAAGGAAGTGGCTGAAAGTGTTCCTGTAAAGCCTAAAAAGGAAAAGAAGCTTTTGGTACTTCCTATGGAGGCATCTGTTTTGGGCATTTTGTTGCTGATCGTGTTAGGTGGTTTCTATGTGGTCCATTGTGTGTGGGCAGCAGCTGAGGCGTACTCAGCTCCTTCAATTGTGTTGACTTCTCGTTCGCGTGATGGATTGCATGTTTTTGATGATTTCCGTGAAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB635991             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CAATAATACTTGGAATAATACCCACATAGCAACAGTTGGAACAGCGATGTCATCTCCAGAAAAAGCAGCTTGGGAGATCTTCAATTCTTTAGATGTCAAATATGTCCTTGTTGTATTTGGAGGTCTTGTTGGCTACCCTAGCGATGATATTAACAAGTTCCTTTGGATGGTTCGCATAGGAGGTGGTGTATTCCCTCACATCAAGGAACCTGATTATCTTAGGGATGGTAACTATCGTGTTGATGCTCAAGGCACCCCAACTATGCTGAATTGCCTCATGTACAAGCTTTGCTATTACAGGTTCGTTGAGACCGATGGCAAAGGTTTTGATAGAGTAAGAGGATATGAAATAGGAAAGAAGCATTTCAAACTAACACATTTTGAGGAGGTTTTCACAACCCACCACTGGATGGTCCGTATATATAAACTGAAACCTCAAAAGAATAGGGTTCGGGGCAAGTTGAAGAAGTTGAAATCTGGCTCCAAAGCTAGCTCAACGAATGCGGCGGGCCGAAAGAAGAACCCATGGCAATAAAAATGAGTAAATGCGAAAAGCGACGTGGCTGCTTGGAATTTGCTTTTGCTAGCTCAACTGCAACTAAGCTCAAAAGAACTAGAAAACCACAGGCCTAGGATTAGAGATTGCTGCGTTATTGCACTCAGTATTTGACACCCCTAATATGTTTTTGGGACCAGCAGGAGTGCTGAAGAAATTTTTGATAGACTGCTCTAAGCTTTTTGGCCCCATTGTTTGCAACACGCGGTTTAGTGTCTTTTATACTCCTTTTGCACTGAAGATGTTTAGGCGGACGTACAATGAAAGTTTATTTAAAAAAAAGA           ]
[+] EMBL CA305806             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ACAGGTTCGTTGAGACCGATGGCAAAGGTTTTGATAGAGTAAGAGGATATGAAATAGGAAAGAAGCATTTCAAACTAACACATTTTGAGGAGGTTTTCACAACCCACCACTGGATGGTCCGTATATATAAACTGAAACCTCAAAAGAATAGGGTTCGGGGCAAGTTGAAGAAGTTGAAATCTGGCTCCAAAGCTAGCTCAACGAATGCGGCGGGCCGAAAGAAGAACCCATGGCAAT AAAATGAGTAAATGCGAAAAGCGACGTGGCTGCTTGGAATTTGCTTTTGCTAGCTCAACTGCAACTAAGCTCAAAAGAACTAGAAAACCACAGGCCTAGGATTAGAGATTGCTGCGTTATTGCACTCAGTATTTGACACCCCTAATATGTTTTTGGGACCAGCAGGAGTGCTGAAGAAATTTTTGATAGACTGCTCTAAGCTTTTTGGCCCCATTGTTTGCAACACGCGGTTTAGTGNCTTTTATACTCCTTTTGCACTGAAGATGTTTAGGCGGACGTACctcggtc                             ]


>consensus_11236#1 TCAATGCTCTCTCATATTTCTACATGGTCTGTTCTTGGGGAGGTTACACATTCATCATCA ACCTTATTCCAATTCATGTACTGTTGTGCATTGTCACTGGTCGTTATTCTTCACGGCTTT ACATTGCTTATGCTCCCCTTGTTATACTGGGAACACTTCTGGCAGCCTTAGTACCCGTGG TTGGTTTTAATGCAGTGATGACGTCTGAGCACTTTGCATCATTTCTGGTGTTCATAATCC TTCATGTGGTTGCTCTTGTGTATTACATAAAAGGACTTCTAACTCCCAGGCTGTTCAAAG TAGCTATGACTCTTGTCATAACAGTTGGCTTGGCTGTTTGTTTTGCAGTAATAGCTATAC TCATCGCTTTGGTGGCATCTAGCCCCACAAAAGGATGGAGTGGGCGCAGTTTGAGTCTAC TTGATCCAACCTATGCAAGCAAGTACATCCCTATTATTGCTAGTGTCAGCGAACATCAAC CCCCTACCTGGCCCTCCTATTTCATGGATATCAACGTGTTGGCCTTCTTGATTCCTGCTG GGATCATTTCATGCTTCTTGCCTTTATCTGATGCAAGCTCCTTCGTGGTCTTGTACTTGG TCACCGCAGTATATTTTTCTGGAGTAATGGTGCGGCTTATGCTTGTCCTTGCTCCTGCTG CGTGCATTTTATCTGGAATCGCTCTTTCTGAGGCTTTCGACGTCCTCACAAGATCCGTTA AATATCAGCTATCAAAATTATTTGATGACAGCCCTGCTGCTTCAGGGGATAGTAGTGCAG AGAGTTCTAGCGCTAGTACTGTCTCCACAAATTCAGCAAAAAATGAGACTAGACCTGAAA AAACTGAAACAGCCCCAAAGGAAAAACCATCAAAGAAAAACCGGAAGAAGGAAAAGGAAG TGGCTGAAAGTGTTCCTGTAAAGCCTAAAAAGGAAAAGAAGCTTTTGGTACTTCCTATGG AGGCATCTGTTTTGGGCATTTTGTTGCTGATCGTGTTAGGTGGTTTCTATGTGGTCCATT GTGTGTGGGCAGCAGCTGAGGCGTACTCAGCTCCTTCAATTGTGTTGACTTCTCGTTCGC GTGATGGATTGCATGTTTTTGATGATTTCCGTGAAGCCTATGCATGGCTCAGCCATAACA CAGATGTTGATGACAAGGTTGCGTCCTGGTGGGATTATGGTTATCAAACAACTGCAATGG CCAACAGGACTGTAATTGTAGACAATAATACTTGGAATAATACCCACATAGCAACAGTTG GAACAGCGATGTCATCTCCAGAAAAAGCAGCTTGGGAGATCTTCAATTCTTTAGATGTCA AATATGTCCTTGTTGTATTTGGAGGTCTTGTTGGCTACCCTAGCGATGATATTAACAAGT TCCTTTGGATGGTTCGCATAGGAGGTGGTGTATTCCCTCACATCAAGGAACCTGATTATC TTAGGGATGGTAACTATCGTGTTGATGCTCAAGGCACCCCAACTATGCTGAATTGCCTCA TGTACAAGCTTTGCTATTACAGGTTCGTTGAGACCGATGGCAAAGGTTTTGATAGAGTAA GAGGATATGAAATAGGAAAGAAGCATTTCAAACTAACACATTTTGAGGAGGTTTTCACAA CCCACCACTGGATGGTCCGTATATATAAACTGAAACCTCAAAAGAATAGGGTTCGGGGCA AGTTGAAGAAGTTGAAATCTGGCTCCAAAGCTAGCTCAACGAATGCGGCGGGCCGAAAGA AGAACCCATGGCAATAAAAATGAGTAAATGCGAAAAGCGACGTGGCTGCTTGGAATTTGC TTTTGCTAGCTCAACTGCAACTAAGCTCAAAAGAACTAGAAAACCACAGGCCTAGGATTA GAGATTGCTGCGTTATTGCACTCAGTATTTGACACCCCTAATATGTTTTTGGGACCAGCA GGAGTGCTGAAGAAATTTTTGATAGACTGCTCTAAGCTTTTTGGCCCCATTGTTTGCAAC ACGCGGTTTAGTGTCTTTTATACTCCTTTTGCACTGAAGATGTTTAGGCGGACGTACAAT GGAAGTTTATTTAGAAAAATGAGAACGTGGCTA



consensusID : consensus_11236#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 793
fasta sequence
                              [GGAACAGCGATGTCATCTCCAGAAAAAGCAGCTTGGGAGATCTTCAATTCTTTAGATGTCAAATATGTCCTTGTTGTATTTGGAGGTTGATGCTTTGTGGACTTCTTTAGAACAAATCAATAACTAGTGGCCCCAGATCCCTGACGTTGGGTGTTTACTTTACAGGTCTTGTTGGCTACCCTAGCGATGATATTAACAAGTTCCTTTGGATGGTTCGCATAGGAGGTGGTGTATTCCCTCACATCAAGGAACCTGATTATCTTAGGGATGGTAACTATCGTGTTGATGCTCAAGGCACCCCAACTATGCTGAATTGCCTCATGTACAAGCTTTGCTATTACAGGTTCGTTGAGACCGATGGCAAAGGTTTTGATAGAGTAAGAGGATATGAAATAGGAAAGAAGCATTTCAAACTAACACATTTTGAGGAGGTTTTCACAACCCACCACTGGATGGTCCGTATATATAAACTGAAACCTCAAAAGAATAGGGTTCGGGGCAAGTTGAAGAAGTTGAAATCTGGCTCCAAAGCTAGCTCAACGAATGCGGCGGGCCGAAAGAAGAACCCATGGCAATAAAAATGAGTAAATGCGAAAAGCGACGTGGCTGCTTGGAATTTGCTTTTGCTAGCTCAACTGCAACTAAGCTCAAAAGAACTAGAAAACCACAGGCCTAGGATTAGAGATTGCTGCGTTATTGCACTCAGTATTTGACACCCCTAATATGTTTTTGGGACCAGCAGGAGTGCTGAAGAAATTTTTGATAGACTGCTCTAAGCTTTTTGGCCCCCATT]

[-] EMBL CB663560             [GGAACAGCGATGTCATCTCCAGAAAAAGCAGCTTGGGAGATCTTCAATTCTTTAGATGTCAAATATGTCCTTGTTGTATTTGGAGGTTGATGCTTTGTGGACTTCTTTAGAACAAATCAATAACTAGTGGCCCCAGATCCCTGACGTTGGGTGTTTACTTTACAGGTCTTGTTGGCTACCCTAGCGATGATATTAACAAGTTCCTTTGGATGGTTCGCATAGGAGGTGGTGTATTCCCTCACATCAAGGAACCTGATTATCTTAGGGATGGTAACTATCGTGTTGATGCTCAAGGCACCCCAACTATGCTGAATTGCCTCATGTACAAGCTTTGCTATTACAGGTTCGTTGAGACCGATGGCAAAGGTTTTGATAGAGTAAGAGGATATGAAATAGGAAAGAAGCATTTCAAACTAACACATTTTGAGGAGGTTTTCACAACCCACCACTGGATGGTCCGTATATATAAACTGAAACCTCAAAAGAATAGGGTTCGGGGCAAGTTGAAGAAGTTGAAATCTGGCTCCAAAGCTAGCTCAACGAATGCGGCGGGCCGAAAGAAGAACCCATGGCAATAAAAATGAGTAAATGCGAAAAGCGACGTGGCTGCTTGGAATTTGCTTTTGCTAGCTCAACTGCAACTAAGCTCAAAAGAACTAGAAAACCACAGGCCTAGGATTAGAGATTGCTGCGTTATTGCACTCAGTATTTGACACCCCTAATATGTTTTTGGGACCAGCAGGAGTGCTGAAGAAATTTTTGATAGACTGCTCTAAGCTTTTTGGCCCCCATT]


>consensus_11236#2 GGAACAGCGATGTCATCTCCAGAAAAAGCAGCTTGGGAGATCTTCAATTCTTTAGATGTC AAATATGTCCTTGTTGTATTTGGAGGTTGATGCTTTGTGGACTTCTTTAGAACAAATCAA TAACTAGTGGCCCCAGATCCCTGACGTTGGGTGTTTACTTTACAGGTCTTGTTGGCTACC CTAGCGATGATATTAACAAGTTCCTTTGGATGGTTCGCATAGGAGGTGGTGTATTCCCTC ACATCAAGGAACCTGATTATCTTAGGGATGGTAACTATCGTGTTGATGCTCAAGGCACCC CAACTATGCTGAATTGCCTCATGTACAAGCTTTGCTATTACAGGTTCGTTGAGACCGATG GCAAAGGTTTTGATAGAGTAAGAGGATATGAAATAGGAAAGAAGCATTTCAAACTAACAC ATTTTGAGGAGGTTTTCACAACCCACCACTGGATGGTCCGTATATATAAACTGAAACCTC AAAAGAATAGGGTTCGGGGCAAGTTGAAGAAGTTGAAATCTGGCTCCAAAGCTAGCTCAA CGAATGCGGCGGGCCGAAAGAAGAACCCATGGCAATAAAAATGAGTAAATGCGAAAAGCG ACGTGGCTGCTTGGAATTTGCTTTTGCTAGCTCAACTGCAACTAAGCTCAAAAGAACTAG AAAACCACAGGCCTAGGATTAGAGATTGCTGCGTTATTGCACTCAGTATTTGACACCCCT AATATGTTTTTGGGACCAGCAGGAGTGCTGAAGAAATTTTTGATAGACTGCTCTAAGCTT TTTGGCCCCCATT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11236#0      TCAATGCTCTCTCATATTTCTACATGGTCTGTTCTTGGGGAGGTTACACATTCATCATCA 60
consensus_11236#1      TCAATGCTCTCTCATATTTCTACATGGTCTGTTCTTGGGGAGGTTACACATTCATCATCA 60
consensus_11236#2      ------------------------------------------------------------
                                                                                   

consensus_11236#0      ACCTTATTCCAATTCATGTACTGTTGTGCATTGTCACTGGTCGTTATTCTTCACGGCTTT 120
consensus_11236#1      ACCTTATTCCAATTCATGTACTGTTGTGCATTGTCACTGGTCGTTATTCTTCACGGCTTT 120
consensus_11236#2      ------------------------------------------------------------
                                                                                   

consensus_11236#0      ACATTGCTTATGCTCCCCTTGTTATACTGGGAACACTTCTGGCAGCCTTAGTACCCGTGG 180
consensus_11236#1      ACATTGCTTATGCTCCCCTTGTTATACTGGGAACACTTCTGGCAGCCTTAGTACCCGTGG 180
consensus_11236#2      ------------------------------------------------------------
                                                                                   

consensus_11236#0      TTGGTTTTAATGCAGTGATGACGTCTGAGCACTTTGCATCATTTCTGGTGTTCATAATCC 240
consensus_11236#1      TTGGTTTTAATGCAGTGATGACGTCTGAGCACTTTGCATCATTTCTGGTGTTCATAATCC 240
consensus_11236#2      ------------------------------------------------------------
                                                                                   

consensus_11236#0      TTCATGTGGTTGCTCTTGTGTATTACATAAAAGGACTTCTAACTCCCAGGCTGTTCAAAG 300
consensus_11236#1      TTCATGTGGTTGCTCTTGTGTATTACATAAAAGGACTTCTAACTCCCAGGCTGTTCAAAG 300
consensus_11236#2      ------------------------------------------------------------
                                                                                   

consensus_11236#0      TAGCTATGACTCTTGTCATAACAGTTGGCTTGGCTGTTTGTTTTGCAGTAATAGCTATAC 360
consensus_11236#1      TAGCTATGACTCTTGTCATAACAGTTGGCTTGGCTGTTTGTTTTGCAGTAATAGCTATAC 360
consensus_11236#2      ------------------------------------------------------------
                                                                                   

consensus_11236#0      TCATCGCTTTGGTGGCATCTAGCCCCACAAAAGGATGGAGTGGGCGCAGTTTGAGTCTAC 420
consensus_11236#1      TCATCGCTTTGGTGGCATCTAGCCCCACAAAAGGATGGAGTGGGCGCAGTTTGAGTCTAC 420
consensus_11236#2      ------------------------------------------------------------
                                                                                   

consensus_11236#0      TTGATCCAACCTATGCAAGCAAGTACATCCCTATTATTGCTAGTGTCAGCGAACATCAAC 480
consensus_11236#1      TTGATCCAACCTATGCAAGCAAGTACATCCCTATTATTGCTAGTGTCAGCGAACATCAAC 480
consensus_11236#2      ------------------------------------------------------------
                                                                                   

consensus_11236#0      CCCCTACCTGGCCCTCCTATTTCATGGATATCAACGTGTTGGCCTTCTTGATTCCTGCTG 540
consensus_11236#1      CCCCTACCTGGCCCTCCTATTTCATGGATATCAACGTGTTGGCCTTCTTGATTCCTGCTG 540
consensus_11236#2      ------------------------------------------------------------
                                                                                   

consensus_11236#0      GGATCATTTCATGCTTCTTGCCTTTATCTGATGCAAGCTCCTTCGTGGTCTTGTACTTGG 600
consensus_11236#1      GGATCATTTCATGCTTCTTGCCTTTATCTGATGCAAGCTCCTTCGTGGTCTTGTACTTGG 600
consensus_11236#2      ------------------------------------------------------------
                                                                                   

consensus_11236#0      TCACCGCAGTATATTTTTCTGGAGTAATGGTGCGGCTTATGCTTGTCCTTGCTCCTGCTG 660
consensus_11236#1      TCACCGCAGTATATTTTTCTGGAGTAATGGTGCGGCTTATGCTTGTCCTTGCTCCTGCTG 660
consensus_11236#2      ------------------------------------------------------------
                                                                                   

consensus_11236#0      CGTGCATTTTATCTGGAATCGCTCTTTCTGAGGCTTTCGACGTCCTCACAAGATCCGTTA 720
consensus_11236#1      CGTGCATTTTATCTGGAATCGCTCTTTCTGAGGCTTTCGACGTCCTCACAAGATCCGTTA 720
consensus_11236#2      ------------------------------------------------------------
                                                                                   

consensus_11236#0      AATATCAGCTATCAAAATTATTTGATGACAGCCCTGCTGCTTCAGGGGATAGTAGTGCAG 780
consensus_11236#1      AATATCAGCTATCAAAATTATTTGATGACAGCCCTGCTGCTTCAGGGGATAGTAGTGCAG 780
consensus_11236#2      ------------------------------------------------------------
                                                                                   

consensus_11236#0      AGAGTTCTAGCGCTAGTACTGTCTCCACAAATTCA--AAAAAATGAGACTAGACCTGAAA 838
consensus_11236#1      AGAGTTCTAGCGCTAGTACTGTCTCCACAAATTCAGCAAAAAATGAGACTAGACCTGAAA 840
consensus_11236#2      ------------------------------------------------------------
                                                                                   

consensus_11236#0      AAACTGAAACAGCCCCAAAGGAAAAACCATCAAAGAAAAACCGGAAGAAGGAAAAGGAAG 898
consensus_11236#1      AAACTGAAACAGCCCCAAAGGAAAAACCATCAAAGAAAAACCGGAAGAAGGAAAAGGAAG 900
consensus_11236#2      ------------------------------------------------------------
                                                                                   

consensus_11236#0      TGGCTGAAAGTGTTCCTGTAAAGCCTAAAAAGGAAAAGAAGCTTTTGGTACTTCCTATGG 958
consensus_11236#1      TGGCTGAAAGTGTTCCTGTAAAGCCTAAAAAGGAAAAGAAGCTTTTGGTACTTCCTATGG 960
consensus_11236#2      ------------------------------------------------------------
                                                                                   

consensus_11236#0      AGGCATCTGTTTTGGGCATTTTGTTGCTGATCGTGTTAGGTGGTTTCTATGTGGTCCATT 1018
consensus_11236#1      AGGCATCTGTTTTGGGCATTTTGTTGCTGATCGTGTTAGGTGGTTTCTATGTGGTCCATT 1020
consensus_11236#2      ------------------------------------------------------------
                                                                                   

consensus_11236#0      GTGTGTGGGCAGCAGCTGAGGCGTACTCAGCTCCTTCAATTGTGTTGACTTCTCGTTCGC 1078
consensus_11236#1      GTGTGTGGGCAGCAGCTGAGGCGTACTCAGCTCCTTCAATTGTGTTGACTTCTCGTTCGC 1080
consensus_11236#2      ------------------------------------------------------------
                                                                                   

consensus_11236#0      GTGATGGATTGCATGTTTTTGATGATTTCCGTGAAGCCTATGCATGGCTCAGCCATAACA 1138
consensus_11236#1      GTGATGGATTGCATGTTTTTGATGATTTCCGTGAAGCCTATGCATGGCTCAGCCATAACA 1140
consensus_11236#2      ------------------------------------------------------------
                                                                                   

consensus_11236#0      CAGATGTTGATGACAAGGTTGCGTCCTGGTGGGATTATGGTTATCAAA--CAACTGCAAT 1196
consensus_11236#1      CAGATGTTGATGACAAGGTTGCGTCCTGGTGGGATTATGGTTATCAAA--CAACTGCAAT 1198
consensus_11236#2      ----------------------GGAACAGCGATGTCATCTCCAGAAAAAGCAGCTTGGGA 38
                                             *     * *   * **    *  ***  ** **     

consensus_11236#0      GGCCAACAGGACTGTAATTGTAGACAATAATACTTGGAATAATACCCACATAGCAACAGT 1256
consensus_11236#1      GGCCAACAGGACTGTAATTGTAGACAATAATACTTGGAATAATACCCACATAGCAACAGT 1258
consensus_11236#2      GATCTTCAATTCTTTAGATGTCAAATATG-TCCTTGTTGTATT----------TGGAGGT 87
                       *  *  **   ** **  ***  *  **  * ****   ** *               **

consensus_11236#0      TGGAACAGCGATGTCATCTCCAGAAAAAGCAGCTTGGGAG-ATCTTCAATTCTTTAGATG 1315
consensus_11236#1      TGGAACAGCGATGTCATCTCCAGAAAAAGCAGCTTGGGAG-ATCTTCAATTCTTTAGATG 1317
consensus_11236#2      TGATGCTTTGTGGACTTCTTTAGAACAAATCAATAACTAGTGGCCCCAGATCCCT-GACG 146
                       **   *   *  * * ***  **** **     *    **   *  **  **  * ** *

consensus_11236#0      TCAAATATGTCCTTGTTGTATTTGGAGGTCTTGTTGGCTACCCTAGCGATGATATTAACA 1375
consensus_11236#1      TCAAATATGTCCTTGTTGTATTTGGAGGTCTTGTTGGCTACCCTAGCGATGATATTAACA 1377
consensus_11236#2      TTGGGTGTTTACTT--------TACAGGTCTTGTTGGCTACCCTAGCGATGATATTAACA 198
                       *    * * * ***        *  ***********************************

consensus_11236#0      AGTTCCTTTGGATGGTTCGCATAGGAGGTGGTGTATTCCCTCACATCAAGGAACCTGATT 1435
consensus_11236#1      AGTTCCTTTGGATGGTTCGCATAGGAGGTGGTGTATTCCCTCACATCAAGGAACCTGATT 1437
consensus_11236#2      AGTTCCTTTGGATGGTTCGCATAGGAGGTGGTGTATTCCCTCACATCAAGGAACCTGATT 258
                       ************************************************************

consensus_11236#0      ATCTTAGGGATGGTAACTATCGTGTTGATGCTCAAGGCACCCCAACTATGCTGAATTGCC 1495
consensus_11236#1      ATCTTAGGGATGGTAACTATCGTGTTGATGCTCAAGGCACCCCAACTATGCTGAATTGCC 1497
consensus_11236#2      ATCTTAGGGATGGTAACTATCGTGTTGATGCTCAAGGCACCCCAACTATGCTGAATTGCC 318
                       ************************************************************

consensus_11236#0      TCATGTACAAGCTTTGCTATTACAGGTTTGACAAACAGAATTCAATAGATAACGTTTAGT 1555
consensus_11236#1      TCATGTACAAGCTTTGCTATTACAGGTT-------------------------------- 1525
consensus_11236#2      TCATGTACAAGCTTTGCTATTACAGGTT-------------------------------- 346
                       ****************************                                

consensus_11236#0      TGTCATCAATATTTTTTTTTTTACATTTGGCTGTTTTCCTTGTTTCCTCCAGGTTCGTTG 1615
consensus_11236#1      -------------------------------------------------------CGTTG 1530
consensus_11236#2      -------------------------------------------------------CGTTG 351
                                                                              *****

consensus_11236#0      AGACCGATGGCAAAGGTTTTGATAGAGTAAGAGGATATGAAATAGGAAAGAAGCATTTCA 1675
consensus_11236#1      AGACCGATGGCAAAGGTTTTGATAGAGTAAGAGGATATGAAATAGGAAAGAAGCATTTCA 1590
consensus_11236#2      AGACCGATGGCAAAGGTTTTGATAGAGTAAGAGGATATGAAATAGGAAAGAAGCATTTCA 411
                       ************************************************************

consensus_11236#0      AACTAACACATTTTGAGGAGGTTTTCACAACCCACCACTGGATGGTCCGTATATATAAAC 1735
consensus_11236#1      AACTAACACATTTTGAGGAGGTTTTCACAACCCACCACTGGATGGTCCGTATATATAAAC 1650
consensus_11236#2      AACTAACACATTTTGAGGAGGTTTTCACAACCCACCACTGGATGGTCCGTATATATAAAC 471
                       ************************************************************

consensus_11236#0      TGAAACCTCAAAAGAATAGGGTTCGGGGCAAGTTGAAGAAGTTGAAATCTGGCTCCAAAG 1795
consensus_11236#1      TGAAACCTCAAAAGAATAGGGTTCGGGGCAAGTTGAAGAAGTTGAAATCTGGCTCCAAAG 1710
consensus_11236#2      TGAAACCTCAAAAGAATAGGGTTCGGGGCAAGTTGAAGAAGTTGAAATCTGGCTCCAAAG 531
                       ************************************************************

consensus_11236#0      CTAGCTCAACGAATGCGGCGGGCCGAAAGAAGAACCCATGGCAATAAAAATGAGTAAATG 1855
consensus_11236#1      CTAGCTCAACGAATGCGGCGGGCCGAAAGAAGAACCCATGGCAATAAAAATGAGTAAATG 1770
consensus_11236#2      CTAGCTCAACGAATGCGGCGGGCCGAAAGAAGAACCCATGGCAATAAAAATGAGTAAATG 591
                       ************************************************************

consensus_11236#0      CGAAAAGCGACGTGGCTGCTTGGAATTTGCTTTTGCTAGCTCAACTGCAACTAAGCTCAA 1915
consensus_11236#1      CGAAAAGCGACGTGGCTGCTTGGAATTTGCTTTTGCTAGCTCAACTGCAACTAAGCTCAA 1830
consensus_11236#2      CGAAAAGCGACGTGGCTGCTTGGAATTTGCTTTTGCTAGCTCAACTGCAACTAAGCTCAA 651
                       ************************************************************

consensus_11236#0      AAGAACTAGAAAACCACAGGCCTAGGATTAGAGATTGCTGCGTTATTGCACTCAGTATTT 1975
consensus_11236#1      AAGAACTAGAAAACCACAGGCCTAGGATTAGAGATTGCTGCGTTATTGCACTCAGTATTT 1890
consensus_11236#2      AAGAACTAGAAAACCACAGGCCTAGGATTAGAGATTGCTGCGTTATTGCACTCAGTATTT 711
                       ************************************************************

consensus_11236#0      GACACCCCTAATATGTTTTTGGGACCAGCAGGAGTGCTGAAGAAATTTTTGATAGACTGC 2035
consensus_11236#1      GACACCCCTAATATGTTTTTGGGACCAGCAGGAGTGCTGAAGAAATTTTTGATAGACTGC 1950
consensus_11236#2      GACACCCCTAATATGTTTTTGGGACCAGCAGGAGTGCTGAAGAAATTTTTGATAGACTGC 771
                       ************************************************************

consensus_11236#0      TCTAAGCTTTTTGGCCCC-ATTGTTTGCAACACGCGGTTTAGTGTCTTTTATACTCCTTT 2094
consensus_11236#1      TCTAAGCTTTTTGGCCCC-ATTGTTTGCAACACGCGGTTTAGTGTCTTTTATACTCCTTT 2009
consensus_11236#2      TCTAAGCTTTTTGGCCCCCATT-------------------------------------- 793
                       ****************** ***                                      

consensus_11236#0      TGCACTGAAGATGTTTAGGCGGACGTACAATGG--------------------------- 2127
consensus_11236#1      TGCACTGAAGATGTTTAGGCGGACGTACAATGGAAGTTTATTTAGAAAAATGAGAACGTG 2069
consensus_11236#2      ------------------------------------------------------------
                                                                                   

consensus_11236#0      ----
consensus_11236#1      GCTA 2073
consensus_11236#2      ----
                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)