Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 11239 cluster # 11239       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11239#0 length = 1268 sequences # 6  
consensus_11239#1 length = 745 sequences # 1  
consensus_11239#2 length = 463 sequences # 1  

consensusID : consensus_11239#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1268
fasta sequence
                              [TCTCCTCCTCTCCTCCGCTCCGCCCACCAACCCTCCCCTCCTCTCGCCTACTACTAAAATCCACCATCGCCATGCTCCTCGTCAGATCCCACCACCTCCTCCTCCACCGCCACCACCACGCCGCCCGCCTCTCCCCGCGCCTCCACCGCCTCCTCCTCCGCCACCCGCCGCCGCTCCCCCGCGCCGCCTCCGCGGCCAGTAGGCTCCGCCCGCCACGCATGTCGTCGGCCTCCTCCTCCAACGCCAGCTCCCCCGCCCCCTCGCCGCCTCCCCCCGTGGTGCCCAAGTCAAAGATACGCTTTTGCCCATCTTGTGGAAGCCCGACGAAACTGGCTATTCCAGATGGAGATGAAAAGATGAGGGCTGTCTGCTCTTCTTGTGGAAGAGTTCACTATGAGAACCCCAAAATGGTTGTTGGCTGTCTTGTGGAACATGATAACAAAGTACTCCTTTGCAGAAGAAAGATCGAACCAGCTTATGGCCTTTGGACTCTTCCTGCTGGTTATTTGGAGGTTGGAGAGTCTGCAGCGGAAGGAGCCTCCCGGGAAACATTGGAGGAAGCTTGTGCAGATGTAGAGATACTTTCACCTTTTGCTCAGTTGGATATTCCACTGATTGGCCAA---AGTTACATTATTTTCCGAGCAAGATTGAAGACCCCCAACTTCTCACCTGGACCTGAATCGCTAGAATGTGCACTTTTTGCCTTGGATGACATACCATTTGATTCTCTAGCATTTTCTTCGATCATTGTCACCTTGAGGATGTATCTTGAAGATGTCAAGTCCGGAAATATCAAATTCCACTACTGCACTATAAACAAAAGGATAGGAACTGGTGCTTCAGATCTTCGCAGTTTTGATATTGACAACCACTTGGCTGTGTGAACTTGAGAAGTCTGGTGACTAATCATGTTGCATGATGAGATTAATTTCGGGATATACAGCAGTCATAATCAACACAGCGATCGCATCGGTCATGGATTTGGAACTGTTGTCTGAGTGTCGAATCTCTGTTCAAGCCTTGCATGGCATCTCGCCACACTGGAATAGATTCTAGGCGCTGGAATTGTAAATGTTCGGTTTCTTGAAGTGTTTATTTTAGCCTTCTAGAGATGTTGCTTTTTTTTTCTTTTTCAATTTTTGTGGAAGGACCAGAGGTTGTAACGTGGCATATGCTGGGAATTTCACAGCTTGGATTGAGTGATCCTGCGCGATGTGGATGGTTTATTCCAGTTGCAAAGCGATTTTATGGGGCAACATGTTACTATA]

[+] EMBL AK109549             [TCTCCTCCTCTCCTCCGCTCCGCCCACCAACCCTCCCCTCCTCTCGCCTACTACTAAAATCCACCATCGCCATGCTCCTCGTCAGATCCCACCACCTCCTCCTCCACCGCCACCACCACGCCGCCCGCCTCTCCCCGCGCCTCCACCGCCTCCTCCTCCGCCACCCGCCGCCGCTCCCCCGCGCCGCCTCCGCGGCCAGTAGGCTCCGCCCGCCACGCATGTCGTTGGCCTCCTCCTCCAACGCCAGCTCCCCCGCCCCCTCGCCGCCTCCCCCCGTGGTGCCCAAGTCAAAGATACGCTTTTGCCCATCTTGTGGAAGCCCGACGAAACTGGCTATTCCAGATGGAGATGAAAAGATGAGGGCTGTCTGCTCTTCTTGTGGAAGAGTTCACTATGAGAACCCCAAAATGGTTGTTGGCTGTCTTGTGGAACATGATAACAAAGTACTCCTTTGCAGAAGAAAGATCGAACCAGCTTATGGCCTTTGGACTCTTCCTGCTGGTTATTTGGAGGTTGGAGAGTCTGCAGCGGAAGGAGCCTCCCGGGAAACATTGGAGGAAGCTTGTGCAGATGTAGAGATACTTTCACCTTTTGCTCAGTTGGATATTCCACTGATTGGCCAATAGAGTTACATTATTTTCCGAGCAAGATTGAAGACCCCCAACTTCTCACCTGGACCTGAATCGCTAGAATGTGCACTTTTTGCCTTGGATGACATACCATTTGATTCTCTAGCATTTTCTTCGATCATTGTCACCTTGAGGGTGTATCTTGAAGATGTCAAGTCCGGAAATATCAAATTCCACTACTGCACTATAAACAAAAGGATAGGAACTGGTGCTTCAGATCTTCGCAGTTTTGATATTGACAACCACTTGGCTGTGTGAACTTGAGAAGTCTGGTGACTAATCATGTTGCATGATGAGATTAATTTCGGGATATACAGCAGTCATAATCAACACAGCGATCGCATCGGTCATGGATTTGGAACTGTTGTCTGAGTGTCGAATCTCTGTTCAAGCCTTGCGTGGCATCTCGCCACACTGGAATAGATTCTAGGCGCTGGAATTGTAAATGTTCGGTTTCTTGAAGTGTTTATTTTAGCCTTCTAGAGATGTTGCTTTTTTTTTCTTTTTCAATTTTTGTGGAAGGACCAGAGGTTGTAACGTGGCATATGCTGGGAATTTCACAGCTTGGATTGAGTGATCCTGCGCGATG                                                     ]
[+] EMBL CF303558             [                                                                                                                                                                                                              CGCCCGCCACGCATGTCGTCGGCCTCCTCCTCCAACGCCAGCTCCCCCGCCCCCTCGCCGCCTCCCCCCGTGGTGCCCAAGTCAAAGATACGCTTTTGCCCATCTTGTGGAAGCCCGACGAAACTGGCTATTCCATATGGAGATGAAAAGATGAGGGCTGTCTGCTCTTCTTGTGGAAGAGTTCACTATGAGAACCCCAAAATGGTTGTTGGCTGTCTTGTGGAACATGATAACAAAGTACTCCTTTGCAGAAGAAAGATCGAACCAGCTTATGGCCTTTGGACTCTTCCTGCTGGTTATTTGGAGGTTGGAGAGTCTGCAGCGGAAGGAGCCTCCCGGGAAACATTGGAGGAAGCTTGTGCAGATGTAGAGATACTTTCACCTTTTGCTCAGTTGGATATTCCACTGATTGGCCAA   AGTTACATTATTTTCCGAGCAAGATTGAAGACCCCCAACTTCTCACCTGGACCTGAATCGCTAGAATGTGCACTTTTTGCCTTGGATGACATACCATTTGATTCTCTAGCATTTTCTTCGATCATTGTCACCTTGAGGATGTATCTTGAAGATGTCAAGTCCGGAAATATCAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF304262             [                                                                                                                                                                                                              CGCCCGCCACGCATGTCGTCGGCCTCCTCCTCCAACGCCAGCTCCCCCGCCCCCTCGCCGCCTCCCCCCGTGGTGCCCAAGTCAAAGATACGCTTTTGCCCATCTTGTGGAAGCCCGACGAAACTGGCTATTCCATTTTTTTATGAAAAGATGAGGGCTGTCTGCTCTTCTTGTGGAAGAGTTCACTATGAGAACCCCAAAATGGTTGTTGGCTGTCTTGTGGAACATGATAACAAAGTACTCCTTTGCAGAAGAAAGATCGAACCAGCTTATGGCCTTTGGACTCTTCCTGCTGGTTATTTGGAGGTTGGAGAGTCTGCAGCGGAAGGAGCCTCCCGGGAAACATTGGAGGAAGCTTGTGCAGATGTAGAGATACTTTCACCTTTTGCTCAGTTGGATATTCCACTGATTGGCCAA   AGTTACATTATTTTCCGAGCAAGATTGAAGACCCCCAACTTCTCACCTGGACCTGAATCGCTAGAATGTGCACTTTTTGCCTTGGATGACATACCATTTGATTCTCTAGCATTTTCTTCGATCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF304243             [                                                                                                                                                                                                              CGCCCGCCACGCATGTCGTCGGCCTCCTCCTCCAACGCCAGCTCCCCCGCCCCCTCGCCGCCTCCCCCCGTGGTGCCCAAGTCAAAGATACGCTTTTGCCCATCTTGTGGAAGCCCGACGAAACTGGCTATTCCAGATGGTTATGAAAAGATGAGGGCTGTCTGCTCTTCTTGTGGAAGAGTTCACTATGAGAACCCCAAAATGGTTGTTGGCTGTCTTGTGGAACATGATAACAAAGTACTCCTTTGCAGAAGAAAGATCGAACCAGCTTATGGCCTTTGGACTCTTCCTGCTGGTTATTTGGAGGTTGGAGAGTCTGCAGCGGAAGGAGCCTCCCGGGAAACATTGGAGGAAGCTTGTGCAGATGTAGAGATACTTTCACCTTTTGCTCAGTTGGATATTCCACTGATTGGCCAA   AGTTACATTATTTTCCGAGCAAGATTGAAGACCCCCAACTTCTCACCTGGACCTGAATCGCTAGAATGTGCACTTTTTGCCTTGGATGACATACCATTTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB668529             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGAAGCTTGTGCAGATGTAGAGATACTTTCACCTTTTGCTCAGTTGGATATTCCACTGATTGGCCAATAGAGTTACATTATTTTCCGAGCAAGATTGAAGACCCCCAACTTCTCACCTGGACCTGAATCGCTAGAATGTGCACTTTTTGCCTTGGATGACATACCATTTGATTCTCTAGCATTTTCTTCGATCATTGTCACCTTGAGGATGTATCTTGAAGATGTCAAGTCCGGAAATATCAAATTCCACTACTGCACTATAAACAAAAGGATAGGAACTGGTGCTTCAGATCTTCGCAGTTTTGATATTGACAACCACTTGGCTGTGTGAACTTGAGAAGTCTGGTGACTAATCATGTTGCATGATGAGATTAATTTCGGGATATACAGCAGTCATAATCAACACAGCGATCGCATCGGTCATGGATTTGGAACTGTTGTCTGAGTGTCGAATCTCTGTTCAAGCCTTGCATGGCATCTCGCCACACTGGAATAGATTTTAGGCGCTGGAATTGTAAATGTTCGGTTTCTTGAAGTGTTTATTTTAGCCTTCTAGAGATGTTGCTTTTTTTTTCTTTTTCAATTTTTGTGGAAGGACCAGAGGTTGTAACGTGGCATTTTTGGGGAATTTCACAGCTTGGATTGAGTGATCCTGCGCGATGTGGATGGTTTATTCCAGTTGCAAAGCGATTTTATGGGGCAACATGTTACTATA]
[+] EMBL CA752610             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AACAAAAGGATAGGAACTGGTGCTTCAGATCTTCGCAGTTTTGATATTGACAACCACTTGGCTGTGTGAACTTGAGAAGTCTGGTGACTAATCATGTTGCATGATGAGATTAATTTCGGGATATACAGCAGTCATAATCAACACAGCGATCGCATCGGTCATGGATTTGGAACTGTTGTCTGAGTGTCGAATCTCTGTTCAAGCCTTGCATGGCATCTCGCCACACTGGAATAGATTCTAGGCGCTGGAATTGTAAATGTTCGGTTTCTTGAAGTGTTTATTTTAGCCTTCTAGAGATGTTGCTTTTTTTTTCTTTTTCAATTTTTGTGGAAGGACCAGAGGTTGTAACGTGGCATATGCTGGGAATTTCACAGCTTGGATTGAGTGATCCTGCGCGATGTGGATGGTTTATTCCAGTTGCAAAGCGAgtattt                   ]


>consensus_11239#0 TCTCCTCCTCTCCTCCGCTCCGCCCACCAACCCTCCCCTCCTCTCGCCTACTACTAAAAT CCACCATCGCCATGCTCCTCGTCAGATCCCACCACCTCCTCCTCCACCGCCACCACCACG CCGCCCGCCTCTCCCCGCGCCTCCACCGCCTCCTCCTCCGCCACCCGCCGCCGCTCCCCC GCGCCGCCTCCGCGGCCAGTAGGCTCCGCCCGCCACGCATGTCGTCGGCCTCCTCCTCCA ACGCCAGCTCCCCCGCCCCCTCGCCGCCTCCCCCCGTGGTGCCCAAGTCAAAGATACGCT TTTGCCCATCTTGTGGAAGCCCGACGAAACTGGCTATTCCAGATGGAGATGAAAAGATGA GGGCTGTCTGCTCTTCTTGTGGAAGAGTTCACTATGAGAACCCCAAAATGGTTGTTGGCT GTCTTGTGGAACATGATAACAAAGTACTCCTTTGCAGAAGAAAGATCGAACCAGCTTATG GCCTTTGGACTCTTCCTGCTGGTTATTTGGAGGTTGGAGAGTCTGCAGCGGAAGGAGCCT CCCGGGAAACATTGGAGGAAGCTTGTGCAGATGTAGAGATACTTTCACCTTTTGCTCAGT TGGATATTCCACTGATTGGCCAAAGTTACATTATTTTCCGAGCAAGATTGAAGACCCCCA ACTTCTCACCTGGACCTGAATCGCTAGAATGTGCACTTTTTGCCTTGGATGACATACCAT TTGATTCTCTAGCATTTTCTTCGATCATTGTCACCTTGAGGATGTATCTTGAAGATGTCA AGTCCGGAAATATCAAATTCCACTACTGCACTATAAACAAAAGGATAGGAACTGGTGCTT CAGATCTTCGCAGTTTTGATATTGACAACCACTTGGCTGTGTGAACTTGAGAAGTCTGGT GACTAATCATGTTGCATGATGAGATTAATTTCGGGATATACAGCAGTCATAATCAACACA GCGATCGCATCGGTCATGGATTTGGAACTGTTGTCTGAGTGTCGAATCTCTGTTCAAGCC TTGCATGGCATCTCGCCACACTGGAATAGATTCTAGGCGCTGGAATTGTAAATGTTCGGT TTCTTGAAGTGTTTATTTTAGCCTTCTAGAGATGTTGCTTTTTTTTTCTTTTTCAATTTT TGTGGAAGGACCAGAGGTTGTAACGTGGCATATGCTGGGAATTTCACAGCTTGGATTGAG TGATCCTGCGCGATGTGGATGGTTTATTCCAGTTGCAAAGCGATTTTATGGGGCAACATG TTACTATA



consensusID : consensus_11239#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 745
fasta sequence
                              [ACCCCCTTAAGCTCCTCGTCAGATCCCACCACCTCCTCCTCCACCGCCACCACCACGCCGCCCGCCTCTCCCCGCGCCTCCACCGCCTCCTCCTCCGCCACCCGCCGCCGCTCCCCCGCGCCGCCTCCGCGGCCAGTAGGCTCCGCCCGCCACGCATGTCGTCGGCCTCCTCCTCCAACGCCAGCTCCCCCGCCCCCTCGCCGCCTCCCCCCGTGGTGCCCAAGACAAAGATACGCTTTTGCCCATCTTGTGGAAGCCCGACGAAACTGGCTATTCCAGATGGAGATGAAAAGATGAGGGCTGTCTGCTCTTCTTGTGGAAGAGTTCACTATGAGAACCCCAAAATGGTTGTTGGCTGTCTTGTGGAACATGATAACAAAGTACTCCTTTGCAGAAGAAAGATCGAACCAACTTATGGCCTTTGGACTCTTCCTGCTGGTTATTTGGAGGTTGGAGAGTCTGCAGCGGAAGGAGCCTCCCGGGAAACATTGGAGGAAGCTTGTGCAGATGTAGAGATACTTTCACCTTTTGCTCAGGTGGATATTCCACTGATTGGCCAATAGAGTTACATTATTTTCCGAGCAAGATTGAAGACCCCCAACTTCTCACCTGGACCTGAATCGCTAGAATGTGCACTTTTTGCCTTGGATGACATACCATTTGATTCTCTAGCATTTTCTTCGATCATTGTCACCTTGAGGATGTATCTTGAAGATGAGAAGCCCGGAAATATCAAATTCCACTA]

[+] EMBL CB668528             [ACCCCCTTAAGCTCCTCGTCAGATCCCACCACCTCCTCCTCCACCGCCACCACCACGCCGCCCGCCTCTCCCCGCGCCTCCACCGCCTCCTCCTCCGCCACCCGCCGCCGCTCCCCCGCGCCGCCTCCGCGGCCAGTAGGCTCCGCCCGCCACGCATGTCGTCGGCCTCCTCCTCCAACGCCAGCTCCCCCGCCCCCTCGCCGCCTCCCCCCGTGGTGCCCAAGACAAAGATACGCTTTTGCCCATCTTGTGGAAGCCCGACGAAACTGGCTATTCCAGATGGAGATGAAAAGATGAGGGCTGTCTGCTCTTCTTGTGGAAGAGTTCACTATGAGAACCCCAAAATGGTTGTTGGCTGTCTTGTGGAACATGATAACAAAGTACTCCTTTGCAGAAGAAAGATCGAACCAACTTATGGCCTTTGGACTCTTCCTGCTGGTTATTTGGAGGTTGGAGAGTCTGCAGCGGAAGGAGCCTCCCGGGAAACATTGGAGGAAGCTTGTGCAGATGTAGAGATACTTTCACCTTTTGCTCAGGTGGATATTCCACTGATTGGCCAATAGAGTTACATTATTTTCCGAGCAAGATTGAAGACCCCCAACTTCTCACCTGGACCTGAATCGCTAGAATGTGCACTTTTTGCCTTGGATGACATACCATTTGATTCTCTAGCATTTTCTTCGATCATTGTCACCTTGAGGATGTATCTTGAAGATGAGAAGCCCGGAAATATCAAATTCCACTA]


>consensus_11239#1 ACCCCCTTAAGCTCCTCGTCAGATCCCACCACCTCCTCCTCCACCGCCACCACCACGCCG CCCGCCTCTCCCCGCGCCTCCACCGCCTCCTCCTCCGCCACCCGCCGCCGCTCCCCCGCG CCGCCTCCGCGGCCAGTAGGCTCCGCCCGCCACGCATGTCGTCGGCCTCCTCCTCCAACG CCAGCTCCCCCGCCCCCTCGCCGCCTCCCCCCGTGGTGCCCAAGACAAAGATACGCTTTT GCCCATCTTGTGGAAGCCCGACGAAACTGGCTATTCCAGATGGAGATGAAAAGATGAGGG CTGTCTGCTCTTCTTGTGGAAGAGTTCACTATGAGAACCCCAAAATGGTTGTTGGCTGTC TTGTGGAACATGATAACAAAGTACTCCTTTGCAGAAGAAAGATCGAACCAACTTATGGCC TTTGGACTCTTCCTGCTGGTTATTTGGAGGTTGGAGAGTCTGCAGCGGAAGGAGCCTCCC GGGAAACATTGGAGGAAGCTTGTGCAGATGTAGAGATACTTTCACCTTTTGCTCAGGTGG ATATTCCACTGATTGGCCAATAGAGTTACATTATTTTCCGAGCAAGATTGAAGACCCCCA ACTTCTCACCTGGACCTGAATCGCTAGAATGTGCACTTTTTGCCTTGGATGACATACCAT TTGATTCTCTAGCATTTTCTTCGATCATTGTCACCTTGAGGATGTATCTTGAAGATGAGA AGCCCGGAAATATCAAATTCCACTA



consensusID : consensus_11239#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 463
fasta sequence
                              [TTTTGCCCATCTTGTGGAAGCCCGACGAAACTGGCTATTCCAGATGGAGATGAAAAGATGAGGGCTGTCTGCTCTTCTTGTGGAAGAGTTCACTATGAGAACCCCAAAATGGTACGAACTGTAGAACGAAATTTAGGACCAAAGACCATCTTCGAAGATGCATATGCATTTAGACTTGAGAATTTAGCCACTGTAACTTGCTTGATTCAAATAGAGTTCCAGCTCCTTCGGAGTTCTTCTGTGCATATCTGCTCTGTTTTTTTTACTACACACATATATCTTTGTTGAAGGCGTATATATGTTTAATAGTATGACTTGGCTTTCGTCTTCCATTTTGCCATTAACCTATGTCATATTGATAGGTTGTTGGCTGTCTTGTGGAACATGATAACAAAGTACTCCTTTGCAGAAGAAAGATCGAACCAGCTTATGGCCTTTGGTAAGCTACTTTTATCAACTCCAT]

[+] EMBL CF303059             [TTTTGCCCATCTTGTGGAAGCCCGACGAAACTGGCTATTCCAGATGGAGATGAAAAGATGAGGGCTGTCTGCTCTTCTTGTGGAAGAGTTCACTATGAGAACCCCAAAATGGTACGAACTGTAGAACGAAATTTAGGACCAAAGACCATCTTCGAAGATGCATATGCATTTAGACTTGAGAATTTAGCCACTGTAACTTGCTTGATTCAAATAGAGTTCCAGCTCCTTCGGAGTTCTTCTGTGCATATCTGCTCTGTTTTTTTTACTACACACATATATCTTTGTTGAAGGCGTATATATGTTTAATAGTATGACTTGGCTTTCGTCTTCCATTTTGCCATTAACCTATGTCATATTGATAGGTTGTTGGCTGTCTTGTGGAACATGATAACAAAGTACTCCTTTGCAGAAGAAAGATCGAACCAGCTTATGGCCTTTGGTAAGCTACTTTTATCAACTCCAT]


>consensus_11239#2 TTTTGCCCATCTTGTGGAAGCCCGACGAAACTGGCTATTCCAGATGGAGATGAAAAGATG AGGGCTGTCTGCTCTTCTTGTGGAAGAGTTCACTATGAGAACCCCAAAATGGTACGAACT GTAGAACGAAATTTAGGACCAAAGACCATCTTCGAAGATGCATATGCATTTAGACTTGAG AATTTAGCCACTGTAACTTGCTTGATTCAAATAGAGTTCCAGCTCCTTCGGAGTTCTTCT GTGCATATCTGCTCTGTTTTTTTTACTACACACATATATCTTTGTTGAAGGCGTATATAT GTTTAATAGTATGACTTGGCTTTCGTCTTCCATTTTGCCATTAACCTATGTCATATTGAT AGGTTGTTGGCTGTCTTGTGGAACATGATAACAAAGTACTCCTTTGCAGAAGAAAGATCG AACCAGCTTATGGCCTTTGGTAAGCTACTTTTATCAACTCCAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11239#0      TCTCCTCCTCTCCTCCGCTCCGCCCACCAACCCTCCCCTCCTCTCGCCTACTACTAAAAT 60
consensus_11239#1      ------------------------------------------------------------
consensus_11239#2      ------------------------------------------------------------
                                                                                   

consensus_11239#0      CCACCATCGCCATGCTCCTCGTCAGATCCCACCACCTCCTCCTCCACCGCCACCACCACG 120
consensus_11239#1      --ACC-CCCTTAAGCTCCTCGTCAGATCCCACCACCTCCTCCTCCACCGCCACCACCACG 57
consensus_11239#2      ------------------------------------------------------------
                                                                                   

consensus_11239#0      CCGCCCGCCTCTCCCCGCGCCTCCACCGCCTCCTCCTCCGCCACCCGCCGCCGCTCCCCC 180
consensus_11239#1      CCGCCCGCCTCTCCCCGCGCCTCCACCGCCTCCTCCTCCGCCACCCGCCGCCGCTCCCCC 117
consensus_11239#2      ------------------------------------------------------------
                                                                                   

consensus_11239#0      GCGCCGCCTCCGCGGCCAGTAGGCTCCGCCCGCCACGCATGTCGTCGGCCTCCTCCTCCA 240
consensus_11239#1      GCGCCGCCTCCGCGGCCAGTAGGCTCCGCCCGCCACGCATGTCGTCGGCCTCCTCCTCCA 177
consensus_11239#2      ------------------------------------------------------------
                                                                                   

consensus_11239#0      ACGCCAGCTCCCCCGCCCCCTCGCCGCCTCCCCCCGTGGTGCCCAAGTCAAAGATACGCT 300
consensus_11239#1      ACGCCAGCTCCCCCGCCCCCTCGCCGCCTCCCCCCGTGGTGCCCAAGACAAAGATACGCT 237
consensus_11239#2      -----------------------------------------------------------T 1
                                                                                  *

consensus_11239#0      TTTGCCCATCTTGTGGAAGCCCGACGAAACTGGCTATTCCAGATGGAGATGAAAAGATGA 360
consensus_11239#1      TTTGCCCATCTTGTGGAAGCCCGACGAAACTGGCTATTCCAGATGGAGATGAAAAGATGA 297
consensus_11239#2      TTTGCCCATCTTGTGGAAGCCCGACGAAACTGGCTATTCCAGATGGAGATGAAAAGATGA 61
                       ************************************************************

consensus_11239#0      GGGCTGTCTGCTCTTCTTGTGGAAGAGTTCACTATGAGAACCCCAAAATGGTTGTTGGCT 420
consensus_11239#1      GGGCTGTCTGCTCTTCTTGTGGAAGAGTTCACTATGAGAACCCCAAAATGGTTGTTGGCT 357
consensus_11239#2      GGGCTGTCTGCTCTTCTTGTGGAAGAGTTCACTATGAGAACCCCAAAATGGT-ACGAACT 120
                       ****************************************************      **

consensus_11239#0      GTCTTGTGGAACATGATAACAAAGTACTCCTTTGCAGAAGAAAGATCGAACCAGCTTATG 480
consensus_11239#1      GTCTTGTGGAACATGATAACAAAGTACTCCTTTGCAGAAGAAAGATCGAACCAACTTATG 417
consensus_11239#2      GTAGAACGAAATTTAGGACCAAAGACCATCTTCGAAGA--------TGCATATGCATTTA 172
                       **     * **  *   * *****  *  *** * ***         * *    * * * 

consensus_11239#0      GCCTTTGGACTCTTCCTGCTGGTTATTTGGAGGTTGGAGAGTCTGCAGCGGAAGGAGCCT 540
consensus_11239#1      GCCTTTGGACTCTTCCTGCTGGTTATTTGGAGGTTGGAGAGTCTGCAGCGGAAGGAGCCT 477
consensus_11239#2      GACTTGAGAATTTAGCCACTG-TAACTTG------------CTTGATTCAAATAGAGTTC 219
                       * ***  ** * *  *  *** * * ***              **   *  *  ***   

consensus_11239#0      CCCGGGAAACATTGGAGGAAGCTTGTGCAGATGTAGAGATACTTTCACCTTTTGCTCAGT 600
consensus_11239#1      CCCGGGAAACATTGGAGGAAGCTTGTGCAGATGTAGAGATACTTTCACCTTTTGCTCAGG 537
consensus_11239#2      C---AGCTCCTTCGGAGTTCTTCTGTGCATATCTG------CTCTGTTTTTTTTACTACA 270
                       *    *   * * ****      ****** ** *       ** *    ****    *  

consensus_11239#0      TGGATATTCCACTGATTGGCCAA---AGTTACATTATTTTCCGAGCAAGATTGAAGACCC 657
consensus_11239#1      TGGATATTCCACTGATTGGCCAATAGAGTTACATTATTTTCCGAGCAAGATTGAAGACCC 597
consensus_11239#2      CACATATATCTTTGTTGAAGGCG------TATATATGTTTAATAGTATGACT--TGGCTT 322
                          ****  *  ** *             ** **   ***   ** * ** *   * *  

consensus_11239#0      CCAACTTCTCACCTGGACCTGAATCGCTAGAATGTGCACTTTTTGCCTTGGATGACATAC 717
consensus_11239#1      CCAACTTCTCACCTGGACCTGAATCGCTAGAATGTGCACTTTTTGCCTTGGATGACATAC 657
consensus_11239#2      TCGTCTTC-CATTTTGCCATTAACCTATGTCATATTGATAGGTTGTTGGCTGTCTTGTGG 381
                        *  **** **  * * * * ** *  *   ** *  *    ***       *    *  

consensus_11239#0      CATTTGATTCTCTAGCATTTTCTTCGATCATTGTCACCTTGAGGATGTATCTTGAAGATG 777
consensus_11239#1      CATTTGATTCTCTAGCATTTTCTTCGATCATTGTCACCTTGAGGATGTATCTTGAAGATG 717
consensus_11239#2      AACATGATAACAAAGTACTCCTTTGCAGAA--GAAAGATCGAACCAGCTTATGGCCTTTG 439
                        *  ****     ** * *   **  *  *  *  *  * **    *  * * *    **

consensus_11239#0      TCAAGTCCGGAAATATCAAATTCCACTACTGCACTATAAACAAAAGGATAGGAACTGGTG 837
consensus_11239#1      AGAAGCCCGGAAATATCAAATTCCACTA-------------------------------- 745
consensus_11239#2      GTAAG-CTACTTTTATCAA-CTCCAT---------------------------------- 463
                         *** *      ******  ****                                   

consensus_11239#0      CTTCAGATCTTCGCAGTTTTGATATTGACAACCACTTGGCTGTGTGAACTTGAGAAGTCT 897
consensus_11239#1      ------------------------------------------------------------
consensus_11239#2      ------------------------------------------------------------
                                                                                   

consensus_11239#0      GGTGACTAATCATGTTGCATGATGAGATTAATTTCGGGATATACAGCAGTCATAATCAAC 957
consensus_11239#1      ------------------------------------------------------------
consensus_11239#2      ------------------------------------------------------------
                                                                                   

consensus_11239#0      ACAGCGATCGCATCGGTCATGGATTTGGAACTGTTGTCTGAGTGTCGAATCTCTGTTCAA 1017
consensus_11239#1      ------------------------------------------------------------
consensus_11239#2      ------------------------------------------------------------
                                                                                   

consensus_11239#0      GCCTTGCATGGCATCTCGCCACACTGGAATAGATTCTAGGCGCTGGAATTGTAAATGTTC 1077
consensus_11239#1      ------------------------------------------------------------
consensus_11239#2      ------------------------------------------------------------
                                                                                   

consensus_11239#0      GGTTTCTTGAAGTGTTTATTTTAGCCTTCTAGAGATGTTGCTTTTTTTTTCTTTTTCAAT 1137
consensus_11239#1      ------------------------------------------------------------
consensus_11239#2      ------------------------------------------------------------
                                                                                   

consensus_11239#0      TTTTGTGGAAGGACCAGAGGTTGTAACGTGGCATATGCTGGGAATTTCACAGCTTGGATT 1197
consensus_11239#1      ------------------------------------------------------------
consensus_11239#2      ------------------------------------------------------------
                                                                                   

consensus_11239#0      GAGTGATCCTGCGCGATGTGGATGGTTTATTCCAGTTGCAAAGCGATTTTATGGGGCAAC 1257
consensus_11239#1      ------------------------------------------------------------
consensus_11239#2      ------------------------------------------------------------
                                                                                   

consensus_11239#0      ATGTTACTATA 1268
consensus_11239#1      -----------
consensus_11239#2      -----------
                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)