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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11264#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2205 fasta sequence
[GACAAAGTTGTTACTTTCCAGAGCCGGTCGTATGATCTTCCTGCTTGGTCGGTCAGTATCCTGCCTGACTGCAAGAATGTGGCGTTCAACACTGCAAAGGTGCGATCTCAAACTCTGATGATGGATATGGTCCCTGCAAATTTGGAATCATCAAAAGTTGATGGGTGGAGCATTTTCAGAGAGAAATATGGGATTTGGGGTAATATCGACTTAGTCCGAAATGGATTTGTAGACCATATTAATACAACAAAAGACTCTACTGACTACCTATGGTACACAACAAGTTTTGACGTAGATGGAAGTCATCTGGCAGGTGGCAACCATGTTCTTCATATTGAATCCAAAGGCCATGCTGTTCAGGCTTTCCTGAACAATGAGCTTATAGGTAGTGCATATGGTAATGGCTCAAAATCAAATTTCAGCGTGGAAATGCCCGTCAATTTGAGGGCTGGGAAGAACAAACTTTCCCTATTGAGTATGACTGTTGGTTTGCAAAATGGAGGACCCATGTACGAATGGGCAGGAGCCGGCATTACAAGTGTGAAGATCTCAGGAATGGAAAACAGAATAATTGACTTGTCTTCCAATAAATGGGAATACAAGATTGGATTGGAAGGGGAATATTATAGTTTGTTCAAGGCAGATAAGGGGAAGGACATAAGGTGGATGCCACAGTCTGAGCCACCAAAAAATCAACCAATGACATGGTACAAGGTAAACGTTGATGTTCCCCAAGGAGATGATCCAGTTGGATTAGATATGCAGTCTATGGGGAAAGGCCTGGCTTGGTTGAATGGAAATGCCATTGGGAGGTATTGGCCCAGGATAAGTCCTGTCAGTGACAGGTGTACTTCCAGTTGTGACTATAGAGGAACGTTTTCTCCAAATAAGTGCAGGAGAGGATGTGGGCAGCCAACTCAAAGATGGTACCATGTCCCACGGTCATGGTTTCATCCATCAGGAAACACCCTTGTGATTTTTGAGGAGAAGGGAGGGGATCCTACAAAGATCACATTCTCAAGAAGAACTGTGGCAAGTGTGTGCTCCTTCGTGTCAGAGCACTACCCTTCCATTGACTTGGAATCCTGGGATAGGAATACCCAAAATGATGGTAGAGACGCAGCAAAAGTACAGTTGTCTTGCCCCAAGGGTAAAAGTATCTCTTCTGTTAAGTTTGTGAGTTTTGGAAACCCCAGTGGAACCTGCAGATCTTACCAACAAGGAAGCTGCCACCATCCGAACTCAATATCTGTTGTTGAGAAGGCCTGTCTGAACATGAATGGCTGTACCGTCTCCTTGTCAGACGAGGGATTTGGAGAAGATTTATGCCCTGGGGTCACCAAAACACTTGCGATTGAGGCAGACTGCTCTTAAGGAGTTTAACTCAGCAATGAGATCCATCGCTACAGATTCGCTCATCAACTTGAAGCTTATAGTGCTTGGTACCCTTGACGGGTCGCCATTGTGGATGCTAACCATCCACCCGAGCAAAGGAATTAATTGCACTGCATTCCCAGGTTTGCAATGGACTACTGTATGATTCAGAAACATGAAGGCATGAACGAGCTTCTATGAGCCCAAAAGGAATGGGATATAATAATATGATATATTGCGATGCCCATGAAACATTTCATAATTGTCATTTTCTTCGTGTTTAGACTTGCTGATATGTAGACACCAGATCGCACTGGAGAAAGTTCTTGGATTGCTCTCTTCATGTTGTGTCGCGTCATGATATTTCTGGATTAACCTGTGAATGAATCTATGGTTGAGGCAGCAGGTGGTCAACACAGTAGTTCATCTCTCGTTATGATTGGGGAGACAAAAATAAGTTGCTCACTGTGCGGGTACTGTGATGTTGCTAAGATCACAGTGCGGAAGAAACCACTAGCTTGTGGCTCCATTGGCCGTAGATTCTGGATAAGATTAAGTAAGATCTGCATTCCATTCCATGGCGTACGGAATGGATGTTATTAAATCTTTGATTAGCCATGGATTAAGGAGCCGGGGCCTTTGACTGGATGCCGCTTCATGTTTTCCTTGTCATGTGAGTATTATTTAGGGGCCCTCGAATTAAGTCCTAATCACCCACAGCCTGTTCCCTTCCTCTTCTCCCTTCTTCCGTAGTGGTTTCATGACTCCATTGATAGGCCATGGTACTTGTACAGTATCAGGGAATAAATAAATATTGGAGGAATCATCTCC]
[+] EMBL AK101399 [GACAAAGTTGTTACTTTCCAGAGCCGGTCGTATGATCTTCCTGCTTGGTCGGTCAGTATCCTGCCTGACTGCAAGAATGTGGCGTTCAACACTGCAAAGGTGCGATCTCAAACTCTGATGATGGATATGGTCCCTGCAAATTTGGAATCATCAAAAGTTGATGGGTGGAGCATTTTCAGAGAGAAATATGGGATTTGGGGTAATATCGACTTAGTCCGAAATGGATTTGTAGACCATATTAATACAACAAAAGACTCTACTGACTACCTATGGTACACAACAAGTTTTGACGTAGATGGAAGTCATCTGGCAGGTGGCAACCATGTTCTTCATATTGAATCCAAAGGCCATGCTGTTCAGGCTTTCCTGAACAATGAGCTTATAGGTAGTGCATATGGTAATGGCTCAAAATCAAATTTCAGCGTGGAAATGCCCGTCAATTTGAGGGCTGGGAAGAACAAACTTTCCCTATTGAGTATGACTGTTGGTTTGCAAAATGGAGGACCCATGTACGAATGGGCAGGAGCCGGCATTACAAGTGTGAAGATCTCAGGAATGGAAAACAGAATAATTGACTTGTCTTCCAATAAATGGGAATACAAGATTGGATTGGAAGGGGAATATTATAGTTTGTTCAAGGCAGATAAGGGGAAGGACATAAGGTGGATGCCACAGTCTGAGCCACCAAAAAATCAACCAATGACATGGTACAAGGTAAACGTTGATGTTCCCCAAGGAGATGATCCAGTTGGATTAGATATGCAGTCTATGGGGAAAGGCCTGGCTTGGTTGAATGGAAATGCCATTGGGAGGTATTGGCCCAGGATAAGTCCTGTCAGTGACAGGTGTACTTCCAGTTGTGACTATAGAGGAACGTTTTCTCCAAATAAGTGCAGGAGAGGATGTGGGCAGCCAACTCAAAGATGGTACCATGTCCCACGGTCATGGTTTCATCCATCAGGAAACACCCTTGTGATTTTTGAGGAGAAGGGAGGGGATCCTACAAAGATCACATTCTCAAGAAGAACTGTGGCAAGTGTGTGCTCCTTCGTGTCAGAGCACTACCCTTCCATTGACTTGGAATCCTGGGATAGGAATACCCAAAATGATGGTAGAGACGCAGCAAAAGTACAGTTGTCTTGCCCCAAGGGTAAAAGTATCTCTTCTGTTAAGTTTGTGAGTTTTGGAAACCCCAGTGGAACCTGCAGATCTTACCAACAAGGAAGCTGCCACCATCCGAACTCAATATCTGTTGTTGAGAAGGCCTGTCTGAACATGAATGGCTGTACCGTCTCCTTGTCAGACGAGGGATTTGGAGAAGATTTATGCCCTGGGGTCACCAAAACACTTGCGATTGAGGCAGACTGCTCTTAAGGAGTTTAACTCAGCAATGAGATCCATCGCTACAGATTCGCTCATCAACTTGAAGCTTATAGTGCTTGGTACCCTTGACGGGTCGCCATTGTGGATGCTAACCATCCACCCGAGCAAAGGAATTAATTGCACTGCATTCCCAGGTTTGCAATGGACTACTGTATGATTCAGAAACATGAAGGCATGAACGAGCTTCTATGAGCCCAAAAGGAATGGGATATAATAATATGATATATTGCGATGCCCATGAAACATTTCATAATTGTCATTTTCTTCGTGTTTAGACTTGCTGATATGTAGACACCAGATCGCACTGGAGAAAGTTCTTGGATTGCTCTCTTCATGTTGTGTCGCGTCATGATATTTCTGGATTAACCTGTGAATGAATCTATGGTTGAGGCAGCAGGTGGTCAACACAGTAGTTCATCTCTCGTTATGATTGGGGAGACAAAAATAAGTTGCTCACTGTGCGGGTACTGTGATGTTGCTAAGATCACAGTGCGGAAGAAACCACTAGCTTGTGGCTCCATTGGCCGTAGATTCTGGATAAGATTAAGTAAGATCTGCATTCCATTCCATGGCGTACGGAATGGATGTTATTAAATCTTTGATTAGCCATGGATTAAGGAGCCGGGGCCTTTGACTGGATGCCGCTTCATGTTTTCCTTGTCATGTGAGTATTATTTAGGGGCCCTCGAATTAAGTCCTAATCACCCACAGCCTGTTCCCTTCCTCTTCTCCCTTCTTCCGTAGTGGTTTCATGACTCCATTGATAGGCCATGGTACTTGTACAGTATCAGGGAATAAATAAATATTGGAGGAATCATCTCC]
consensusID : consensus_11264#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1734 fasta sequence
[GACAAAGTTGTTACTTTCCAGAGCCGGTCGTATGATCTTCCTGCTTGGTCGGTCAGTATCCTGCCTGACTGCAAGAATGTGGCGTTCAACACTGCAAAGGTGCGATCTCAAACTCTGATGATGGATATGGTCCCTGCAAATTTGGAATCATCAAAAGTTGATGGGTGGAGCATTTTCAGAGAGAAATATGGGATTTGGGGTAATATCGACTTAGTCCGAAATGGATTTGTAGACCATATTAATACAACAAAAGACTCTACTGACTACCTATGGTACACAACAAGTTTTGACGTAGATGGAAGTCATCTGGCAGGTGGCAACCATGTTCTTCATATTGAATCCAAAGGCCATGCTGTTCAGGCTTTCCTGAACAATGAGCTTATAGGTAGTGCATATGGTAATGGCTCAAAATCAAATTTCAGCGTGGAAATGCCCGTCAATTTGAGGGCTGGGAAGAACAAACTTTCCCTATTGAGTATGACTGTTGGTTTGCAAAATGGAGGACCCATGTACGAATGGGCAGGAGCCGGCATTACAAGTGTGAAGATCTCAGGAATGGAAAACAGAATAATTGACTTGTCTTCCAATAAATGGGAATACAAGATTGGATTGGAAGGGGAATATTATAGTTTGTTCAAGGCTGATAAGGGGAAGGACATAAGGTGGATGCCACAGTCTGAGCCACCAAAAAATCAACCAATGACATGGTACAAGGTAAACGTTGATGTTCCCCAAGGAGATGATCCAGTTGGATTAGATATGCAGTCTATGGGGAAAGGCCTGGCTTGGTTGAATGGAAATGCCATTGGGAGGTATTGGCCCAGGATAAGTCCTGTCAGTGACAGGTGTACTTCCAGTTGTGACTATAGAGGAACGTTTTCTCCAAATAAGTGCAGGAGAGGATGTGGGCAGCCAACTCAAAGATGGTACCATGTCCCACGGTCATGGTTTCATCCATCAGGAAACACCCTTGTGATTTTTGAGGAGAAGGGAGGGGATCCTACAAAGATCACATTCTCAAGAAGAACTGTGGCAAGTGTGTGCTCCTTCGTGTCAGAGCACTACCCTTCCATTGACTTGGAATCCTGGGATAGGAATACCCAAAATGATGGTAGAGACGCAGCAAAAGTACAGTTGTCTTGCCCCAAGGGTAAAAGTATCTCTTCTGTTAAGTTTGTGAGTTTTGGAAACCCCAGTGGAACCTGCAGATCTTACCAACAAGGAAGCTGCCACCATCCGAACTCAATATCTGTTGTTGAGAAGGCCTGTCTGAACATGAATGGCTGTACCGTCTCCTTGTCAGACGAGGGATTTGGAGAAGATTTATGCCCTGGGGTCACCAAAACACTTGCGATTGAGGCAGACTGCTCTTAAGGAGTTTAACTCAGCAATGAGATCCATCGCTACAGATTCGCTCATCAACTTGAAGCTTATAGTGCTTGGTACAGTAGCATACTACAACAACTTCGAAGTGAAATCCTACCTAGATTTAGATTACGACCTGTTATGAGCATGATTTGGCACTTTGTTTCTTTGACTTCTCTTTTGCTCAACAATATGTCCAGGTACCCTTGACGGGTCGCCATTGTGGATGCTAACCATCCACCCGAGCAAAGGAATTAATTGCACTGCATTCCCAGGTTTGCAATGGACTACTGTATGATTCAGAAACATGAAGGCATGAACGAGCTTCTATGAGCCCAAAAGGAATGGGATATAATATAATATGATATA]
[+] EMBL AK102715 [GACAAAGTTGTTACTTTCCAGAGCCGGTCGTATGATCTTCCTGCTTGGTCGGTCAGTATCCTGCCTGACTGCAAGAATGTGGCGTTCAACACTGCAAAGGTGCGATCTCAAACTCTGATGATGGATATGGTCCCTGCAAATTTGGAATCATCAAAAGTTGATGGGTGGAGCATTTTCAGAGAGAAATATGGGATTTGGGGTAATATCGACTTAGTCCGAAATGGATTTGTAGACCATATTAATACAACAAAAGACTCTACTGACTACCTATGGTACACAACAAGTTTTGACGTAGATGGAAGTCATCTGGCAGGTGGCAACCATGTTCTTCATATTGAATCCAAAGGCCATGCTGTTCAGGCTTTCCTGAACAATGAGCTTATAGGTAGTGCATATGGTAATGGCTCAAAATCAAATTTCAGCGTGGAAATGCCCGTCAATTTGAGGGCTGGGAAGAACAAACTTTCCCTATTGAGTATGACTGTTGGTTTGCAAAATGGAGGACCCATGTACGAATGGGCAGGAGCCGGCATTACAAGTGTGAAGATCTCAGGAATGGAAAACAGAATAATTGACTTGTCTTCCAATAAATGGGAATACAAGATTGGATTGGAAGGGGAATATTATAGTTTGTTCAAGGCTGATAAGGGGAAGGACATAAGGTGGATGCCACAGTCTGAGCCACCAAAAAATCAACCAATGACATGGTACAAGGTAAACGTTGATGTTCCCCAAGGAGATGATCCAGTTGGATTAGATATGCAGTCTATGGGGAAAGGCCTGGCTTGGTTGAATGGAAATGCCATTGGGAGGTATTGGCCCAGGATAAGTCCTGTCAGTGACAGGTGTACTTCCAGTTGTGACTATAGAGGAACGTTTTCTCCAAATAAGTGCAGGAGAGGATGTGGGCAGCCAACTCAAAGATGGTACCATGTCCCACGGTCATGGTTTCATCCATCAGGAAACACCCTTGTGATTTTTGAGGAGAAGGGAGGGGATCCTACAAAGATCACATTCTCAAGAAGAACTGTGGCAAGTGTGTGCTCCTTCGTGTCAGAGCACTACCCTTCCATTGACTTGGAATCCTGGGATAGGAATACCCAAAATGATGGTAGAGACGCAGCAAAAGTACAGTTGTCTTGCCCCAAGGGTAAAAGTATCTCTTCTGTTAAGTTTGTGAGTTTTGGAAACCCCAGTGGAACCTGCAGATCTTACCAACAAGGAAGCTGCCACCATCCGAACTCAATATCTGTTGTTGAGAAGGCCTGTCTGAACATGAATGGCTGTACCGTCTCCTTGTCAGACGAGGGATTTGGAGAAGATTTATGCCCTGGGGTCACCAAAACACTTGCGATTGAGGCAGACTGCTCTTAAGGAGTTTAACTCAGCAATGAGATCCATCGCTACAGATTCGCTCATCAACTTGAAGCTTATAGTGCTTGGTACAGTAGCATACTACAACAACTTCGAAGTGAAATCCTACCTAGATTTAGATTACGACCTGTTATGAGCATGATTTGGCACTTTGTTTCTTTGACTTCTCTTTTGCTCAACAATATGTCCAGGTACCCTTGACGGGTCGCCATTGTGGATGCTAACCATCCACCCGAGCAAAGGAATTAATTGCACTGCATTCCCAGGTTTGCAATGGACTACTGTATGATTCAGAAACATGAAGGCATGAACGAGCTTCTATGAGCCCAAAAGGAATGGGATATAATATAATATGATATA]
[+] EMBL CF323757 [ GATGCCACAGTCTGAGCCACCAAAAAATCAACCAATGACATGGTACAAGGTAAACGTTGATGTTCCCCAAGGAGATGATCCAGTTGGATTAGATATGCAGTCTATGGGGAAAGGCCTGGCTTGGTTGAATGGAAATGCCATTGGGAGGTATTGGCCCAGGATAAGTCCTGTCAGTGACAGGTGTACTTCCAGTTGTGACTATAGAGGAACGTTTTCTCCAAATAAGTGCAGGAGAGGATGTGGGCAGCCAACTCAAAGATGGTACCATGTCCCACGGTCATGGTTTCATCCATCAGGAAACACCCTTGTGATTTTTGAGGAGAAGGGAGGGGATCCTACAAAGATCACATTCTCAAGAAGAACTGTGGCAAGTGTGTGCTCCTTCGTGTCAGAGCACTACCCTTCCATTGACTTGGAATCCTGGGATAGGAATACCCAAAATGATGGTA ]
[+] EMBL CA762921 [ TGGCTTGGTTGAATGGAAATGCCATTGGGAGGTATTGGCCCAGGATAAGTCCTGTCAGTGACAGGTGTACTTCCAGTTGTGACTATAGAGGAACGTTTTCTCCAAATAAGTGCAGGAGAGGATGTGGGCAGCCAACTCAAAGATGGTACCATGTCCCACGGTCATGGTTTCATCCATCAGGAAACACCCTTGTGATTTTTGAGGAGAAGGGAGGGGATCCTACAAAGATCACATTC ]
consensusID : consensus_11264#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 981 fasta sequence
[AAGGTGGATGCCACAGTCTGAGCCCCAAAAAATAACCATGACATGGTACAAGGTAAACGTTGATGTTCCCCAAGGAGATGATCCAGNTGGATTAGATATGCAGTCTATGGGGAAAGGCCTGGCTTGGTTGAATGGAAATGCCATTGGGAGGTATTGGCCCAGGATAAGTCCTGTCAGTGACAGGTGTACTTCCAGTTGTGACTATAGAGGAACGTTTTCTCCAAATAAGTGCAGGAGAGGATGTGGGCAGCCAACTCAAAGATGGTACCATGTCCCACGGTCATGGTTTCATCCATCAGGAAACACCC-TTGTGATTTTTGAGGAGAAGGGAGGGGATCCTA-CAAAGAT-CACATTCTCAAGAAGAACTGTGGCAAGTGTGTGCTCCTTCGTGTCAGAGCACTACCCTTCCATT-GAC-TTGGAATCCTGGGATAGGAAT-ACCCAAAATGATGGTAGAGACGCAGCAAAAGTACAGTTGTCTTG-CCCCAAGGGT-AAAAGTATCTCTTCTGTTAAGTTTGCGAGTTTTGGAAACCCCAGTGGAA-CCTGCAGATCTTACCAACAAGGAAGCTGCCACCAT-CCGAACTCAATATCTGTTGTTGAGAAGGCCT-GTCTGAACATGAATGGCTGTACCCTCTCCTTGTCAGACGAGGGATTTGGAGAAGATTTATGCCCTGGGGTCACCAAAACACTTGCGATTGAGGCAGACTGCTCTTAAGGAGTTTAAC-TCAGCAATGAGATCCATCGCTACAGA-TTCGCTCATCAACTTGAAGCTTATAGTGCTTGGTACAGTAGCATACTACAACAACTTCGAAGTGAAATCCTACCTAGATTTAGATTACGACCTGTTATGAGCATGATTTGGCACTTTGTTTCTTTGACTTCTCTTTAGCTC-ACAATATGTCCA-GTACCCTTGACGGGTCCCCATTGTGGATGCTAACCATCCACCCGAGCAAAGGAATTAATTGCACTGCAAAAAAAAAAAAA]
[+] EMBL CA765806 [AAGGTGGATGCCACAGTCTGAGCCCCAAAAAATAACCATGACATGGTACAAGGTAAACGTTGATGTTCCCCAAGGAGATGATCCAGNTGGATTAGATATGCAGTCTATGGGGAAAGGCCTGGCTTGGTTGAATGGAAATGCCATTGGGAGGTATTGGCCCAGGATAAGTCCTGTCAGTGACAGGTGTACTTCCAGTTGTGACTATAGAGGAACGTTTTCTCCAAATAAGTGCAGGAGAGGATGTGGGCAGCCAACTCAAAGATGGTACCATGTCCCACGGTCATGGTTTCATCCATCAGGAAACACCC TTGTGATTTTTGAGGAGAAGGGAGGGGATCCTA CGAAGAT CACATTCTCAAGAAGAACTGTGGCAAGTGTGTGCTCCTTCGTGTCAGAGCACTACCCTTCCATT GAC TTGGAATCCTGGGATAGGAAT ACCCAAAATGATGGTAGAGACGCAGCAAAAGTACAGTTGTCTTG CCCCAAGGGT AAAAGTATCTCTTCTGNTAAGTTTGCGAGTTTTGGAAACCCCAGTGGAA CCTGCAGATCTTACCAACAAGGAAGCTGCCACCAT CCGAACTCAATATCTGTTGTTGAGAAGGCCT GTCTGAACATGAATGGCTGTACCCTCTCCTTGTCAGACGAGGGATTTGGAGAANATTTATGCCCTGGGGTCACCAAAACACTTGCGATTGAGGCAGACTGCTCTTAAGGAGTTTAAC TCAGCAATGAGATCCATCGCTACAGATTTCGCTCATCAACTTGAAGCTTATAGGGCTTGGTACAGTAGCATACTACA ]
[+] EMBL BE040410 [ TGGCTTGGTTGAATGGAAATGCCATTGGGAGGTATTGGCCCAGGATAAGTCCTGTCAGTGACAGGTGTACTTCCAGTTGTGACTATAGAGGAACGTTTTCTCCAAATAAGTGCAGGAGAGGATGTGGGCAGCCAACTCAAAGATGGTACCATGTCCCACGGTCATGGTTTCATCCATCAGGAAACACCC TTGTGATTTTTGAGGAGAAGGGAGGGGATCCTA CAAAGAT CACATTCTCAAGAAGAACTGTGGCAAGTGTGTGCTCCTTCGTGTCAGAGCACTACCCTTCCATT GAC TTGGAATCCTGGGATAGGAAT ACCCAAAATGATGGTAGAGACGCAGCAAAAGTACAGTTGTCTTG CCCCAAGGGT AAAAGTATCTCTTCTGTTAAGTTTGCGAGTTTTGGAAACCCCAGTGGAA CCTGCAGATCTTACCAACAAGGAAGCTGCCACCAT CCGAACTCAATATCTGTTGTTGAGAAGGCCT GTCTGAACATGAATGGCTGTACCCTCTCCTTGTCAGACGAGGGATTTGGAGAAGATTTATGCCCTGGGGTCACCAAAACACTTGCGATTGAGGCAGACTGCTCTTAAGGAGTTTAACTTCAGC ATGAGATCCATCGCTACAGA TTCGCTCATCAACTTGAAGCTTATAGTGCTTGGTACAGTAGCATACTACAACAACTTCGAAGTG AATCCTACCTAGATTTAGATTACGACCTTGTATGAGCATGATTT GCACTTTTGTTCTTTGACTTCTC TTAACTC ACAATATGTCCA GTACCCTTGACGGGTCCC ]
[+] EMBL BE040411 [ TGGCTTGGTTGAATGGAAATGCCATTGGGAGGTATTGGCCCAGGATAAGTCCTGTCAGTGACAGGTGTACTTCCAGTTGTGACTATAGAGGAACGTTTTCTCCAAATAAGTGCAGGAGAGGATGTGGGCAGCCAACTCAAAGATGGTACCATGTCCCACGGTCATGGTTTCATCCATCAGGAAACACCC TTGTGATTTTTGAGGAGAAGGGAGGGGATCCTA CAAAGAT CACATTCTCAAGAAGAACTGTGGCAAGTGTGTGCTCCTTCGTGTCAGAGCACTACCCTTCCATT GAC TTGGAATCCTGGGATAGGAAT ACCCAAAATGATGGTAGAGACGCAGCAAAAGTACAGTTGTCTTG CCCCAAGGGT AAAAGTATCTCTTCTGTTAAGTTTGCGAGTTTTGGAAACCCCAGTGGAA CCTGCAGATCTTACCAACAAGGAAGCTGCCACCAT CCGAACTCAATATCTGTTGTTGAGAAGGCCT GTCTGAACATGAATGGCTGTACCCTCTCCTTGTCAGACGAGGGATTTGGAGAAGATTTATGCCCTGGGGTCACCAAAACACTTGCGATTGAGGCAGACTGCTCTTAAGGAGTTTAAC TCAGCAATGAGATCCATCGCTACAGA TTCGCTCATCAACTTGAAGCTTATAGTGCTTGGTACAGTAGCATACTACAACAACTTCGAAGTGAAATCCTACCTAGATTTAGATTACGACCTGTTATGAGCATGGATTGGCACTTTGTTTC TTGACTTCT TTTAGCTC ACAATA ]
[+] EMBL AU089696 [ AACCCCCCTTTGTGATTTTTAAGGAGAAGGGNAGGGATCCTACCAAAGATNCACATTCTCAAGAANAACTGTGGCAAGTGTGTGCCCCTTCGTGTCAGAGCA TACCCTTCCATTGGACNTTGGAATCCTGGGATAGGAATNCCCCAAAATGATGGTAGAGNCGCAGCAAAAGTACAGTTGTCTTGCCCCCAAGGGTAAAAAGTANCTCTTCTGTTAAGTTTGTGAGTTTTGGAACCCCCANTGGAACCCTGCAGATCTTACCAACAAGGAAGCTGCCACCATCCCGAACTCAATANCTGTTGTTGAGAAGGCCTGGTCTGAACATGAATGGCTGTACCGTCTCCTTGTCAGACGAGGGATTTGGAGAAGATTTATGCCCTGGGGTCACCAAAACACTTGCGATTGAGGCAGACTGCTCTTAAGGAGTTTAAC TCAGCAATGAGATCCATCGCTACAGA TTCGCTCATCAACTTGAAGCTTATAGTGCTTGGTACAGTAGCATACTACAACAACTTCGAAGTGAAATCCTACCTAGATTTAGATTACGACCTGTTATGAGCATGATTTGGCACTTTGTTTCTTTGACTTCTCTTTTGCTCAACAATATGTCCAGGTACCCTTGACGGGTCGCCATTGTGGATGCTAACCATCCACCCGAGCAAAGGAATTAATTGCACTGCAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11264#1 GACAAAGTTGTTACTTTCCAGAGCCGGTCGTATGATCTTCCTGCTTGGTCGGTCAGTATC 60
consensus_11264#2 ------------------------------------------------------------
consensus_11264#0 GACAAAGTTGTTACTTTCCAGAGCCGGTCGTATGATCTTCCTGCTTGGTCGGTCAGTATC 60
consensus_11264#1 CTGCCTGACTGCAAGAATGTGGCGTTCAACACTGCAAAGGTGCGATCTCAAACTCTGATG 120
consensus_11264#2 ------------------------------------------------------------
consensus_11264#0 CTGCCTGACTGCAAGAATGTGGCGTTCAACACTGCAAAGGTGCGATCTCAAACTCTGATG 120
consensus_11264#1 ATGGATATGGTCCCTGCAAATTTGGAATCATCAAAAGTTGATGGGTGGAGCATTTTCAGA 180
consensus_11264#2 ------------------------------------------------------------
consensus_11264#0 ATGGATATGGTCCCTGCAAATTTGGAATCATCAAAAGTTGATGGGTGGAGCATTTTCAGA 180
consensus_11264#1 GAGAAATATGGGATTTGGGGTAATATCGACTTAGTCCGAAATGGATTTGTAGACCATATT 240
consensus_11264#2 ------------------------------------------------------------
consensus_11264#0 GAGAAATATGGGATTTGGGGTAATATCGACTTAGTCCGAAATGGATTTGTAGACCATATT 240
consensus_11264#1 AATACAACAAAAGACTCTACTGACTACCTATGGTACACAACAAGTTTTGACGTAGATGGA 300
consensus_11264#2 ------------------------------------------------------------
consensus_11264#0 AATACAACAAAAGACTCTACTGACTACCTATGGTACACAACAAGTTTTGACGTAGATGGA 300
consensus_11264#1 AGTCATCTGGCAGGTGGCAACCATGTTCTTCATATTGAATCCAAAGGCCATGCTGTTCAG 360
consensus_11264#2 ------------------------------------------------------------
consensus_11264#0 AGTCATCTGGCAGGTGGCAACCATGTTCTTCATATTGAATCCAAAGGCCATGCTGTTCAG 360
consensus_11264#1 GCTTTCCTGAACAATGAGCTTATAGGTAGTGCATATGGTAATGGCTCAAAATCAAATTTC 420
consensus_11264#2 ------------------------------------------------------------
consensus_11264#0 GCTTTCCTGAACAATGAGCTTATAGGTAGTGCATATGGTAATGGCTCAAAATCAAATTTC 420
consensus_11264#1 AGCGTGGAAATGCCCGTCAATTTGAGGGCTGGGAAGAACAAACTTTCCCTATTGAGTATG 480
consensus_11264#2 ------------------------------------------------------------
consensus_11264#0 AGCGTGGAAATGCCCGTCAATTTGAGGGCTGGGAAGAACAAACTTTCCCTATTGAGTATG 480
consensus_11264#1 ACTGTTGGTTTGCAAAATGGAGGACCCATGTACGAATGGGCAGGAGCCGGCATTACAAGT 540
consensus_11264#2 ------------------------------------------------------------
consensus_11264#0 ACTGTTGGTTTGCAAAATGGAGGACCCATGTACGAATGGGCAGGAGCCGGCATTACAAGT 540
consensus_11264#1 GTGAAGATCTCAGGAATGGAAAACAGAATAATTGACTTGTCTTCCAATAAATGGGAATAC 600
consensus_11264#2 ------------------------------------------------------------
consensus_11264#0 GTGAAGATCTCAGGAATGGAAAACAGAATAATTGACTTGTCTTCCAATAAATGGGAATAC 600
consensus_11264#1 AAGATTGGATTGGAAGGGGAATATTATAGTTTGTTCAAGGCTGATAAGGGGAAGGACATA 660
consensus_11264#2 -----------------------------------------------------------A 1
consensus_11264#0 AAGATTGGATTGGAAGGGGAATATTATAGTTTGTTCAAGGCAGATAAGGGGAAGGACATA 660
*
consensus_11264#1 AGGTGGATGCCACAGTCTGAGCCACCAAAAAATCAACCAATGACATGGTACAAGGTAAAC 720
consensus_11264#2 AGGTGGATGCCACAGTCTGAGCC-CCAAAAAAT-AACCA-TGACATGGTACAAGGTAAAC 58
consensus_11264#0 AGGTGGATGCCACAGTCTGAGCCACCAAAAAATCAACCAATGACATGGTACAAGGTAAAC 720
*********************** ********* ***** ********************
consensus_11264#1 GTTGATGTTCCCCAAGGAGATGATCCAGTTGGATTAGATATGCAGTCTATGGGGAAAGGC 780
consensus_11264#2 GTTGATGTTCCCCAAGGAGATGATCCAGNTGGATTAGATATGCAGTCTATGGGGAAAGGC 118
consensus_11264#0 GTTGATGTTCCCCAAGGAGATGATCCAGTTGGATTAGATATGCAGTCTATGGGGAAAGGC 780
**************************** *******************************
consensus_11264#1 CTGGCTTGGTTGAATGGAAATGCCATTGGGAGGTATTGGCCCAGGATAAGTCCTGTCAGT 840
consensus_11264#2 CTGGCTTGGTTGAATGGAAATGCCATTGGGAGGTATTGGCCCAGGATAAGTCCTGTCAGT 178
consensus_11264#0 CTGGCTTGGTTGAATGGAAATGCCATTGGGAGGTATTGGCCCAGGATAAGTCCTGTCAGT 840
************************************************************
consensus_11264#1 GACAGGTGTACTTCCAGTTGTGACTATAGAGGAACGTTTTCTCCAAATAAGTGCAGGAGA 900
consensus_11264#2 GACAGGTGTACTTCCAGTTGTGACTATAGAGGAACGTTTTCTCCAAATAAGTGCAGGAGA 238
consensus_11264#0 GACAGGTGTACTTCCAGTTGTGACTATAGAGGAACGTTTTCTCCAAATAAGTGCAGGAGA 900
************************************************************
consensus_11264#1 GGATGTGGGCAGCCAACTCAAAGATGGTACCATGTCCCACGGTCATGGTTTCATCCATCA 960
consensus_11264#2 GGATGTGGGCAGCCAACTCAAAGATGGTACCATGTCCCACGGTCATGGTTTCATCCATCA 298
consensus_11264#0 GGATGTGGGCAGCCAACTCAAAGATGGTACCATGTCCCACGGTCATGGTTTCATCCATCA 960
************************************************************
consensus_11264#1 GGAAACACCCTTGTGATTTTTGAGGAGAAGGGAGGGGATCCTACAAAGATCACATTCTCA 1020
consensus_11264#2 GGAAACACCCTTGTGATTTTTGAGGAGAAGGGAGGGGATCCTACAAAGATCACATTCTCA 358
consensus_11264#0 GGAAACACCCTTGTGATTTTTGAGGAGAAGGGAGGGGATCCTACAAAGATCACATTCTCA 1020
************************************************************
consensus_11264#1 AGAAGAACTGTGGCAAGTGTGTGCTCCTTCGTGTCAGAGCACTACCCTTCCATTGACTTG 1080
consensus_11264#2 AGAAGAACTGTGGCAAGTGTGTGCTCCTTCGTGTCAGAGCACTACCCTTCCATTGACTTG 418
consensus_11264#0 AGAAGAACTGTGGCAAGTGTGTGCTCCTTCGTGTCAGAGCACTACCCTTCCATTGACTTG 1080
************************************************************
consensus_11264#1 GAATCCTGGGATAGGAATACCCAAAATGATGGTAGAGACGCAGCAAAAGTACAGTTGTCT 1140
consensus_11264#2 GAATCCTGGGATAGGAATACCCAAAATGATGGTAGAGACGCAGCAAAAGTACAGTTGTCT 478
consensus_11264#0 GAATCCTGGGATAGGAATACCCAAAATGATGGTAGAGACGCAGCAAAAGTACAGTTGTCT 1140
************************************************************
consensus_11264#1 TGCCCCAAGGGTAAAAGTATCTCTTCTGTTAAGTTTGTGAGTTTTGGAAACCCCAGTGGA 1200
consensus_11264#2 TGCCCCAAGGGTAAAAGTATCTCTTCTGTTAAGTTTGCGAGTTTTGGAAACCCCAGTGGA 538
consensus_11264#0 TGCCCCAAGGGTAAAAGTATCTCTTCTGTTAAGTTTGTGAGTTTTGGAAACCCCAGTGGA 1200
************************************* **********************
consensus_11264#1 ACCTGCAGATCTTACCAACAAGGAAGCTGCCACCATCCGAACTCAATATCTGTTGTTGAG 1260
consensus_11264#2 ACCTGCAGATCTTACCAACAAGGAAGCTGCCACCATCCGAACTCAATATCTGTTGTTGAG 598
consensus_11264#0 ACCTGCAGATCTTACCAACAAGGAAGCTGCCACCATCCGAACTCAATATCTGTTGTTGAG 1260
************************************************************
consensus_11264#1 AAGGCCTGTCTGAACATGAATGGCTGTACCGTCTCCTTGTCAGACGAGGGATTTGGAGAA 1320
consensus_11264#2 AAGGCCTGTCTGAACATGAATGGCTGTACCCTCTCCTTGTCAGACGAGGGATTTGGAGAA 658
consensus_11264#0 AAGGCCTGTCTGAACATGAATGGCTGTACCGTCTCCTTGTCAGACGAGGGATTTGGAGAA 1320
****************************** *****************************
consensus_11264#1 GATTTATGCCCTGGGGTCACCAAAACACTTGCGATTGAGGCAGACTGCTCTTAAGGAGTT 1380
consensus_11264#2 GATTTATGCCCTGGGGTCACCAAAACACTTGCGATTGAGGCAGACTGCTCTTAAGGAGTT 718
consensus_11264#0 GATTTATGCCCTGGGGTCACCAAAACACTTGCGATTGAGGCAGACTGCTCTTAAGGAGTT 1380
************************************************************
consensus_11264#1 TAACTCAGCAATGAGATCCATCGCTACAGATTCGCTCATCAACTTGAAGCTTATAGTGCT 1440
consensus_11264#2 TAACTCAGCAATGAGATCCATCGCTACAGATTCGCTCATCAACTTGAAGCTTATAGTGCT 778
consensus_11264#0 TAACTCAGCAATGAGATCCATCGCTACAGATTCGCTCATCAACTTGAAGCTTATAGTGCT 1440
************************************************************
consensus_11264#1 TGGTACAGTAGCATACTACAACAACTTCGAAGTGAAATCCTACCTAGATTTAGATTACGA 1500
consensus_11264#2 TGGTACAGTAGCATACTACAACAACTTCGAAGTGAAATCCTACCTAGATTTAGATTACGA 838
consensus_11264#0 TGGTACCCTTG-ACGGGTCGCCATTGTGGATGCTAACCATCCACCCGAGCAAAGGAATTA 1499
****** * * * * ** * ** * ** * ** * * *
consensus_11264#1 CCTGTTATGAGCATGATTTGGCACTTTGTTTCTTTGACTTCTCTTTTGCTCAACAATATG 1560
consensus_11264#2 CCTGTTATGAGCATGATTTGGCACTTTGTTTCTTTGACTTCTCTTTAGCTCA-CAATATG 897
consensus_11264#0 ATTGCACT--GCATTCCCAGG---TTTGCAA--TGGACTACTGTATGATTCAGAAACATG 1552
** * **** ** **** * **** ** * * *** ** ***
consensus_11264#1 TCCAGGTACCCTTGACGGGTCGCCATTGTGGATGCTAACCATCCACCCGAGCAAAGGAAT 1620
consensus_11264#2 TCCAG-TACCCTTGACGGGTCCCCATTGTGGATGCTAACCATCCACCCGAGCAAAGGAAT 956
consensus_11264#0 ---AA--GGCATGAACGAGCTTCTAT-GAGCCCAAAAGGAATGGGATATAATAATATGAT 1606
* * * *** * * ** * * * ** * ** **
consensus_11264#1 TAATTGCACTGCATTCCCAGGTTTGCAATGGACTACTGTATGATTCAGAAACATGAAGGC 1680
consensus_11264#2 TAATTGCACTGCAAAAAAAAAAAAA----------------------------------- 981
consensus_11264#0 ATATTGCGATGCCCATGAAACATTTCATAATTGTCATTTTCTTCGTGTTTAGACTTGCTG 1666
***** *** *
consensus_11264#1 ATGAACGAGCTTCTATGAGCCCAAAAGGAATGGGATATAATATAATATGATATA------ 1734
consensus_11264#2 ------------------------------------------------------------
consensus_11264#0 ATATGTAGACACCAGATCGCACTGGAGAAAGTTCTTGGATTGCTCTCTTCATGTTGTGTC 1726
consensus_11264#1 ------------------------------------------------------------
consensus_11264#2 ------------------------------------------------------------
consensus_11264#0 GCGTCATGATATTTCTGGATTAACCTGTGAATGAATCTATGGTTGAGGCAGCAGGTGGTC 1786
consensus_11264#1 ------------------------------------------------------------
consensus_11264#2 ------------------------------------------------------------
consensus_11264#0 AACACAGTAGTTCATCTCTCGTTATGATTGGGGAGACAAAAATAAGTTGCTCACTGTGCG 1846
consensus_11264#1 ------------------------------------------------------------
consensus_11264#2 ------------------------------------------------------------
consensus_11264#0 GGTACTGTGATGTTGCTAAGATCACAGTGCGGAAGAAACCACTAGCTTGTGGCTCCATTG 1906
consensus_11264#1 ------------------------------------------------------------
consensus_11264#2 ------------------------------------------------------------
consensus_11264#0 GCCGTAGATTCTGGATAAGATTAAGTAAGATCTGCATTCCATTCCATGGCGTACGGAATG 1966
consensus_11264#1 ------------------------------------------------------------
consensus_11264#2 ------------------------------------------------------------
consensus_11264#0 GATGTTATTAAATCTTTGATTAGCCATGGATTAAGGAGCCGGGGCCTTTGACTGGATGCC 2026
consensus_11264#1 ------------------------------------------------------------
consensus_11264#2 ------------------------------------------------------------
consensus_11264#0 GCTTCATGTTTTCCTTGTCATGTGAGTATTATTTAGGGGCCCTCGAATTAAGTCCTAATC 2086
consensus_11264#1 ------------------------------------------------------------
consensus_11264#2 ------------------------------------------------------------
consensus_11264#0 ACCCACAGCCTGTTCCCTTCCTCTTCTCCCTTCTTCCGTAGTGGTTTCATGACTCCATTG 2146
consensus_11264#1 -----------------------------------------------------------
consensus_11264#2 -----------------------------------------------------------
consensus_11264#0 ATAGGCCATGGTACTTGTACAGTATCAGGGAATAAATAAATATTGGAGGAATCATCTCC 2205
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||