cluster # 1127

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Oryza sativa
cluster # 1127 cluster # 1127 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1127#0 length = 919 sequences # 2

consensusID : consensus_1127#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 919
fasta sequence

                              [GCAATTGTTGGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTCGGATCGCGGCGACGGGGGCGGTTCGCCGCCCCCGACGTCGCGAGAAGTCCATTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTCCGCCATTTCCTCCTCCACCGCCTACCGCATCTCCTCGCGTTCACACCACGCACCCGAATCTTCCGCGCCTACCGGACGCCGGTGGGCCACGCCGCGCTTCGGTCGGCGCGTCGCCGGAGGAAGGAGGAGGAGCCGTCTCGTTGCCATGAAGTGGGGGATCGCCGCCGCCGTCGGGAGGTGCGACGCCTTCCTCGTCCGCCACAACCAGGGTTCGTCGTTGTCAAGGGACGCGGAACGCGCGGCGGCGGCGGCGGCGGGGGAGCAGCGTGTGGAGGGGAAGAAGTTCGCGCCGCGGTTCGACGGCCTCCGATTCATCGAGACGCTCGTCACGGCGCACCGCTGAACTGGGGCTGAGATTCCTTCCTTCCTTCCTCCCGTGATTCGGCGGAGGAA---GAGGAGGAGGAGACGCCAGATGCGCGCGTGATCCTTCGGCGATTTAGATGCAGCGCCAAGAAGTTTTGTTAGGACAATTGAGAAATTGAGGCTTTGAAATCTTTCCTCTTCTTTCTGTTTGCTTTTCTTTCTAATTTCTTCTTATTTTCCCCCCTTTCTATTGTTACTGCTATTGCTGTTGACAATTATGGTGATCCTTGTTAAG-CTGAGGCGATAATTGTGATGATTTATGTAAATTGCGAGCCATGATTGATTCTTCATCCAATTTCTTAGGAC]

[+] EMBL AK109445             [GCAATTGTTGGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTCGGATCGCGGCGACGGGGGCGGTTCGCCGCCCCCGACGTCGCGAGAAGTCCATTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTCCGCCATTTCCTCCTCCACCGCCTACCGCATCTCCTCGCGTTCACACCACGCACCCGAATCTTCCGCGCCTACCGGACGCCGGTGGGCCACGCCGCGCTTCGGTCGGCGCGTCGCCGGAGGAAGGAGGAGGAGCCGTCTCGTTGCCATGAAGTGGGGGATCGCCGCCGCCGTCGGGAGGTGCGACGCCTTCCTCGTCCGCCACAACCAGGGTTCGTCGTTGTCAAGGGACGCGGAACGCGCGGCGGCGGCGGCGGCGGGGGAGCAGCGTGTGGAGGGGAAGAAGTTCGCGCCGCGGTTCGACGGCCTCCGATTCATCGAGACGCTCGTCACGGCGCACCGCTGAACTGGGGCTGAGATTCCTTCCTTCCTTCCTCCCGTGATTCGGCGGAGGAA   GAGGAGGAGGAGACGCCAGATGCGCGCGTGATCCTTCGGCGATTTAGATGCAGCGCCAAGAAGTTTTGTTAGGACAATTGAGAAATTGAGGCTTTGAAATCTTTCCTCTTCTTTCTGTTTGCTTTTCTTTCTAATTTCTTCTTATTTTCCCCCCTTTCTATTGTTACTGCTATTGCTGTTGACAATTATGGTGATCCTTGTTAAG CTGAGGCGATAATTGTGATGATTTATGTAAATTGCGAGCCATGATTGATTCTTCATCCAATTTCTTAGGAC]
[+] EMBL BM037782             [                                                                                                                                                                                                                                                                                                                                                                                                                                            TGCGA  CCTTCCTCGTCCGCCACAACCAGGGTTCGTCGTT TCAA GGACGCGGAACGCGCGGC    GC GC GCGGGGGAGCAGCGTGTGGAGGGGAAGAAGTTCGCGCCGCGGTTCGACGGCCTCCGATTCATCGAGACGCTCGTCACGGCGCACCGCTGAAC CGGGCTGAGATTCCTTCCTTCCTTCCTCCCGTGATTCGGCGGAGGAAGAGGAGGAGGAGGAGACGCCAGATGCGCGCGTGATCCTTCGGCGATTTAGATGCAGCGCCGAGAAGTTTTGTTAGGACAATTGAGAAATTGAGGCTTTGAAATCTTTCCTCTTCTTTCTGTTTGCTTTTCTTTCTAATTTCTTCTTATTTTCCCCCCTTTCTATTGTTACTGCTATTGCTGTTGACAATTATGGTGATCCTTGTTAAGCCTGAGGCGATAATTGTGATGATTTATGTAAATTGCGAGCCATGATTGATTCTTCAaaaaaaa         ]




>consensus_1127#0
GCAATTGTTGGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGAC
TACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAA
GTGTTCGGATCGCGGCGACGGGGGCGGTTCGCCGCCCCCGACGTCGCGAGAAGTCCATTG
AACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGA
AGGATCATTCCGCCATTTCCTCCTCCACCGCCTACCGCATCTCCTCGCGTTCACACCACG
CACCCGAATCTTCCGCGCCTACCGGACGCCGGTGGGCCACGCCGCGCTTCGGTCGGCGCG
TCGCCGGAGGAAGGAGGAGGAGCCGTCTCGTTGCCATGAAGTGGGGGATCGCCGCCGCCG
TCGGGAGGTGCGACGCCTTCCTCGTCCGCCACAACCAGGGTTCGTCGTTGTCAAGGGACG
CGGAACGCGCGGCGGCGGCGGCGGCGGGGGAGCAGCGTGTGGAGGGGAAGAAGTTCGCGC
CGCGGTTCGACGGCCTCCGATTCATCGAGACGCTCGTCACGGCGCACCGCTGAACTGGGG
CTGAGATTCCTTCCTTCCTTCCTCCCGTGATTCGGCGGAGGAAGAGGAGGAGGAGACGCC
AGATGCGCGCGTGATCCTTCGGCGATTTAGATGCAGCGCCAAGAAGTTTTGTTAGGACAA
TTGAGAAATTGAGGCTTTGAAATCTTTCCTCTTCTTTCTGTTTGCTTTTCTTTCTAATTT
CTTCTTATTTTCCCCCCTTTCTATTGTTACTGCTATTGCTGTTGACAATTATGGTGATCC
TTGTTAAGCTGAGGCGATAATTGTGATGATTTATGTAAATTGCGAGCCATGATTGATTCT
TCATCCAATTTCTTAGGAC

clustalw multiple alignements is not computed in this case