These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11270#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1220 fasta sequence [ACAAATGTTAAACAGGGTGCATAGAAATGCCATGTCCCAGGTACCAGCGGAAACAGCAGCCACTACACTAAAGTGTAAAGACAAGCACTTTGCAAATTGCAAAATTGCAACCCAAAGATACACATTGCAATAGAAGCCTAGGATGGCGGTTGAAACATAAGCTGGTTCGATAAAAATGAAGCCAACTCCACCCTAGTTGCTTAGAGTACAGCACTCAAAACGGGATCACACTAACCAAGCGTGAAACCACACAAAACTTGACAGACAAACGTGATCCTACATAAGATAAGGAAGAGTTTGTGTGATCACATCCTATCCTCTCTCCTGCGTGGGGCACAAGTTATGATCTCATCAACCCTGAGAATCATCTCAGCCGCCTCGGTGGCGGAGAGAAGGATGGCTTGCTTCACCTTGAAGGCCTCCGATATGCCTCGCTTTTGCATGTCTCCAACGCTGCCTGTGATGACATCGATTCCAGCAGTGCAATTCTCCTTGTGGTGCTCAGCTCGGAGCTGAGAGATCAGCTCAGCACTGTCCAGACCAGCATTATCAGCTATGATTGTTGGGATGGCTTGCAGGGCACGTGAAAAGGCATCGATAGCATGAGATTTCTTCCCAGGGGTCTTCCTTGCGAGATCATCCACAGCTTTGGCCATCACCATCTCCGGCCAACCACCCCCAAATAAGACACGGGTGTCATTTACTGTCTGGGAAAGCACACATAAGGCATCGTGCAAGGACCTCTCAGCCTCGTCAAGCACATGCTCACTTGCTCCTCTTAAAACAATGGTGCAAGCCTGGCCCATCGCGACACCAGAGAAGTGAATAAGTTTGTCCT-CCCC-AATC-ATAATCTCTTCAATGACATTGCAATGCCCAAGCTTAACAGACTCTGGGTTGTCAAAAGTTGATGC-AATGTCACCACCGGTGACAAGAGCTAGCCGTTCAATGCCCTCAAAGTCAGCATGCTCAATTGCAAGTATGCCAGCATCAGCAAAAAGTTCTTCAGGGAAGTTATAGATCAACTGCCTATTGACAAAGCAGTTAATTCCATGACCAATGATTTTCTGAACTTTCTCTCTCATTTTCTGCTTTTCGGCAGCTTCAATTTCTGCGACCTTAGCCATCGAATCCACTCGGACACGTGCCCCATATATCTTTACTTTGTCTGTGTCCATAGCTGTGTTTGCAACTAAAATTTTGGCATTCTCAATTCTCTTTGG] [+] EMBL CB653322 [ACAAATGTTAAACAGGGTGCATAGAAATGCCATGTCCCAGGTACCAGCGGAAACAGCAGCCACTACACTAAAGTGTAAAGACAAGCACTTTGCAAATTGCAAAATTGCAACCCAAAGATACACATTGCAATAGAAGCCTAGGATGGCGGTTGAAACATAAGCTGGTTCGATAAAAATGAAGCCAACTCCACCCTAGTTGCTTAGAGTACAGCACTCAAAACGGGATCACACTAACCAAGCGTGAAACCACACAAAACTTGACAGACAAACGTGATCCTACATAAGATAAGGAAGAGTTTGTGTGATCACATCCTATCCTCTCTCCTGCGTGGGGCACAAGTTATGATCTCATCAACCCTGAGAATCATCTCAGCCGCCTCGGTGGCGGAGAGAAGGATGGCTTGCTTCACCTTGAAGGCCTCCGATATGCCTCGCTTTTGCATGTCTCCAACGCTGCCTGTGATGACATCGATTCCAGCAGTGCAATTCTCCTTGTGGTGCTCAGCTCGGAGCTGAGAGATCAGCTCAGCACTGTCCAGACCAGCATTATCAGCTATGATTGTTGGGATGGCTTGCAGGGCACGTGAAAAGGCATCGATAGCATGAGATTTCTTCCCAGGGGTCTTCCTTGCGAGATCATCCACAGCTTTGGCCATCACCATCTCCGGCCAACCACCCCCAAATAAGACACGGGTGTCATTTACTGTCTGGGAAAGCACACATAAGGCATCGTGCAAGGACCTCTCAGCCTCGTCAAGCACATGCTCACTTGCTCCTCTTAAAACAATGGTGCAAGCCTG ] [-] EMBL AU093126 [ tttttTAAAGTGTAAAGACAAGCACTTTGCAAATTGCAAAATTGCAACCCAAAGATACACATTGCAATANAAGCCTAGGATGGCGGTTGAAACATAAGCTGGTTCGATAAAAATGAAGCCAACTCCACCCTAGTTGCTTAGAGTACAGCACTCAAAACGGGATCACACTAACCAAGCGTGAAACCACACAAAACTTGACAGACAAACGTGATCCTACATAAGATAAGGAAGAGTTTGTGTGATCACATCCTATCCTCTCTCCTGCGTGGGGCACAAGTTATGATCTCATCAACCCTGAGAATCATCTCANCCGCCTCGGTGG ] [+] EMBL CB673129 [ AGACAAGCACTTTGCAAATTGCAAAATTGCAACCCAAAGATACACATTGCAATAGAAGCCTAGGATGGCGGTTGAAACATAAGCTGGTTCGATAAAAATGAAGCCAACTCCACCCTAGTTGCTTAGAGTACAGCACTCAAAACGGGATCACACTAACCAAGCGTGAAACCACACAAAACTTGACAGACAAACGTGATCCTACATAAGATAAGGAAGAGTTTGTGTGATCACATCCTATCCTCTCTCCTGCGTGGGGCACAAGTTATGATCTCATCAACCCTGAGAATCATCTCAGCCGCCTCGGTGGCGGAGAGAAGGATGGCTTGCTTCACCTTGAAGGCCTCCGATATGCCTCGCTTTTGCATGTCTCCAACGCTGCCTGTGATGACATCGATTCCAGCAGTGCAATTCTCCTTGTGGTGCTCAGCTCGGAGCTGAGAGATCAGCTCAGCACTGTCCAGACCAGCATTATCAGCTATGATTGTTGGGATGGCTTGCAGGGCACGTGAAAAGGCATCGATAGCATGAGATTTCTTCCCAGGGGTCTTCCTTGCGAGATCATCCACAGCTTTGGCCATCACCATCTCCGGCCAACCACCCCCAAATAAGACACGGGTGTCATTTACTGTCTGGGAAAGCACACATAAGGCATCGTGCAAGGACCTCTCAGCCTCGTCAAGCACATGCTCACTTGCTCCTCTTAAAACAATGGTGCAAGCCTGGCCCATCGCGACACCAGAGAAGTGAATAAGTTTGTCCT CCCC AATC ATAATC ] [+] EMBL CB621358 [ AAAATTGCAACCCAAAGATCCACATTGCAATAGAAGCCTAGGATGGCGGTTGAAACATAAGCTGGTTCGATAAAAATGAAGCCAACTCCACCCTAGTTGCTTAGAGTACAGCACTCAAAACGGGATCACACTAACCAAGCGTGAAACCGCACAAAACTTG AGACAAACGTGATCCTACATAAGATAAGGAAGAGTTTGTGTGATCACATCCTATCCTCTCTCCTGCGTGGGGCACAAGTTATGATCTCATCAACCCTGAGAATCATCTCAGCCGCCTCAGTGGCGGAGAGAAGGATGGCTTGCTTCACCTTGAAGGCCTCCGATATGCCTCGCTTTTGCATGTCTCCAACGCTGCCTGTGATGACATCGATTCCAGCAGTGCAATTCTCCTTGTGGTGCTCAGCTCGGAGCTGAGAGATCAGCTCAGCACTGTCCAGACCAGCATTATCAGCTATGATTGTTGGGATGGCTTGCAGGGCACGTGAAAAGGCATCGATAGCATGAGATTTCTTCCCAGGGGTCTTCCTTGCAAGATCATCCACAGCTTTGGCCATCACCATCTCCGGCCAACCACCCCCAAATAAGACACGGGTGTCATTTACTGTCTGGGAAAGCACACATAAGGCATCGTGCAAGGACCTCTCAGCCTCGTCAAGCACATGCTCACTTGCTCCTCTTAAAACAATGGTGCAAGCCTGGCCCATCGCGACACCAGAGAAGTGAATAAGTTTGTCCT CCCC AATC ATAATCTCTTCAATGACATTGCAATGCCCAAGCTTAACAGACTCTGGGTTGTCAAAAGTT ] [-] EMBL CA997934 [ CGTGCAAGAACCTCTCAGCCTCGTCAAGCACATGCTCACTTGCTCGTCTTAAAACAATGGTGCAAGCCTGGCCCATCGCGACACCAGAGAAGTGAATAAGTTTGTCCT CCCC AATC ATAATCTCTTCAATGACATTGCAATGCCCAAGCTTAACAGACTCTGGGTTGTCAAAAGTTGATGC AATGTCACCACCGGTGACAAGAGCTAGCCGTTCAATGCCCTCAAAGTCAGCATGCTCAATTGCAAGTATGCCAGCATCAGCAAAAAGTTCTTCAGGGAAGTTATAGATCAACTGCCTATTGACAAAGCAGTTAATTCCATAACCAATGATTATCTGAACTTTCTCTCTCATTTTCTGCTTTTCGGCAGCTTCAATTTCTGCGACCTTAGCCATCGAATCCACTCGGACACGTGCCCCATATATCTTTACTTTGTCTGTGTCCATAGCTGTGTTTGCAACTAAAATTTTGGCATTCTCAAT ] [-] EMBL C72845 [ gCCTNTCAGCCTCGTCAAGCACATGNTCACTTGCCCCTCTTAAAACAATGGTGCAAGCNTGGCCCATCGCGACACCAGAGAAGTGAATAAGTTTGTCCTCCCCC AATC ATAATCTCTTCAATGACATTGCAATGCCCAAGCTTAACAGACTCTGGGTTGTCAAAAGTTGATGC AAATNCACCACCGGTNACAAGAGCTAGCCGTTCAATGCCCTCAAAGTCAGCATGCTCAATTGCAAGTATGCCAGCATCAGCAAAAAGTTCTTCAGGGAAGTTATAGATCAACTGCCTATTGACAAAGCAGTTAATTCCATGACCAATGATTTTCTGAACTTTCTCTCTCATTTTCTGCTTTTCGGCAGCTTCAATTTCTGCGACCTTAGCCATCGAATCCACTCGGACACGTGCCCCATATATCTTTACT ] [-] EMBL C28864 [ TCGGGACACCAGAGAAGTGAATAAG TTGGCCT CCCCAAATCAATAATCTCTTCAATGACATTGCAATGCCCAAGCTTAACAGACTCTGGGTTGTCAAAAGTTGATGCAAATG CACCACCGGTGACAAGAGCTAGCCGTTCAATGCCCTCAAAGTCAGCATGCTCAATTGCAAGTATGCCAGCATCAGCAAAAAGTTCTTCAGGGAAGTTATAGATCAACTGCCTATTGACAAAGCAGTTAATTCCATGACCAATGATTTTCTGAACTTTCTCTCTCATTTTCTGCTTTNCGNCAGCTTCAATTTCTGCGACCTTAGCCATCGAATCCACTCGGACACGTGCCCCATATATCTTTACTTTGTCTGTGTCCATAGCTGTGTTTGCAACTAAAATTTTGGCATTCTCAATTCTCTTTGG] [-] EMBL CB000202 [ GTGAATAAGTTTGTCCT CGGC AATC ATAATGTCTTCAATGACATTGCAATGCGCAAGCTTAACAGACTCTGGGTTGTCAAAAGGTGATGC AATGTCACCGCCGGTGACAAGAGGTAGCCGTTCAATGCCCTCAAAGTCAGCATGGTCAATTGCAAGTATGCCAGCATCAGCAAAAAGTTCTTCAGGGAAGTTATAGATCAGGTGCCTATCGACAAAGCAGTTAATTCCAT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||