cluster # 11272

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Oryza sativa
cluster # 11272 cluster # 11272 Sequences # 8 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11272#0 length = 2754 sequences # 7

consensus_11272#1 length = 672 sequences # 1

consensusID : consensus_11272#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2754
fasta sequence

                              [TGCTGAAATTGATATACGATCAATTGTTGTCGGTGATCATACATTGTCTGTCTTGGAGATATGGGGTGCTGAGTACCAGGAACAAGATGCACTTCTGGTGAAGCCTGAGAGCAGAAGCCTGTTAGAGTCACTTTGTGAAAGGGAAAGGGTTTCAATGGCTGTCATTGGTACAATTGATGGATGTGGAAAGATTGTTTTGATTGACAGTGCTGCTATGGAGCATGCCAAGATAAATGGCCTTCCTCCTCCAACCCCTGTTGAGGATCTTGAACTTGAAAAGGTTCTAGGAGATATGCCCCAAAAGACCTTTGAATTCAAGCGAGTGTCTCTAGTCAGCGAGCCCTTAGACATTGCCCCTGGAGTAACAATCATGGATGCTCTGAAGCGAGTATTGAGTCTTCCGTCCATATGTTCTAAGCGTTTCTTAACCACAAAAGTTGACAGGTGTGTGACAGGTCTTGTTGCACAACAGCAGACAGTTGGACCTCTCCAACTTCCTCTCGCAGATGTGGCTGTGATTGCACAGACATATACTGACTTGACAGGTGGTGCCTGTGCCATTGGAGAACAACCAGCAAAAGGTTTACTTAATCCCAAGGCCATGGCAAGACTTGCTGTTGGGGAGGCCTTGACTAATCTGGTCTGGGCTAAAGTTTCATCACTTTCTGATGTCAAAGCAAGTGGTAACTGGATGTATGCTGCAAAGCTTGATGGAGAAGGTGCAGATATGTATGATGCTGCTGTTGCATTGGCTGACTGCATGATTCAACTTGGTATTGCAATCGATGGGGGAAAGGACAGTCTTTCCATGGCAGCTCAATGTGATGGTGAGGTTGTCAAGGCTCCTGGAAATCTGGTCATCAGTGCTTATGTGACATGTCCTGATATAACATTGACAGTAACTCCTGATTTGAAGCTTGGCAATGATGGAGTTTTGCTGCACATTGACCTGGGCAAAGGAAAGCGCAGGCTTGGTGGTTCTGCTCTTGCACAGGCTTTTGATCAAATTGGAAATGACTGCCCAGACATTGATGATGTTCCCTACTTAAAGAAAGCTTTTGAGGCCGTTCAGGAATTGCTTAGTCAGCGCCTTATCTCAGCTGGCCATGACATTAGTGATGGGGGTCTTATTGTGAGTGTTCTTGAGATGGCATTTGCTGGTAATTGCGGTGTTAAGCTGAACATTGACTCAGAAGATTCGGGCCTTCTTCAAGCACTCTTTGCCGAGGAGCTTGGCCTTCTTCTTGAAGTGCACTTGAAAGATCTCAGTGTTGTGAAGCAAAAGCTTGAAGCAGGAGGCATTTCCGCTAATGTAATTGGACAAGTTACAGCATCACCAGATATTGAGCTAGTTGTTGATGGCAGGCTGCATCTCAAGGAAAAAACTTCAGATCTCAGGGATATCTGGGAGGAAACAAGCTTCCAGCTTGAGGGGCTACAACGCCTGAAATCTTGTGTCAGACTTGAGAAAGAAGGACTAAAGCACAGAACATCACCATCGT-GGTCTTTGTCTTTCACTCCCAAATTTACAGATGAAAAACTGCTGACTGCTTCCTCAAAGCCAAAAGTTGCCATCATTCGTGAAGAAGGGAGCAATGGTGATA-GGGAGATGGCTGCTGCATTCTATGCTGCTGGATTTGAACCATGGGATATCACAATGTCAGACCTCTTAGCT-GGGAAGTCTTCTCTAGAGGAGTACCGTGGGATTGCATTTGTTGGTGGTTTTAGCTATGCAGATGTTCTTGATTCAGCTAAAGGGTGGGCTGCATCAATCAGGTTTAATCAGCCCCTCATACAGCAGTTCCAGAATTTCTATAATAGGCCAGATACTTTCAGCCTTGGAGTGTGCAATGGTTGTCAGCTAATGGCTCTTCTTGGCTGGGTACCAGGATCAGATGTCGGAAGTTCTCTTGGTTCAGGTGGGGACATGTCCCAGCCAAGATTTATTCACAATGAATCTGGTCGTTTTGAGTGTCGGTTTACAAGTGTCTCTATAGGGACCTCTCCTGCTATCATGTTCAAAGGAATGGAAGGTTCTACACTGGGCATTTGGAGTGCTCATGGTGAGGGGAGAGCTTTCTTCCCAGATGAAAATGTTCTAGCTAGTGTTGTGAACTCTAACCTGGCTCCTGTGCGGTACTGTGACGATGCTAATAACATTACCGAAGTCTACCCGTTCAATCCCAATGGCTCTCCCCTTGGCATTGCAGCCCTTTGCTCCCCTGATGGAAGACATCTTGCTATGATGCCACACCCAGAGCGTTGCTTCATGATGTGGCAATATCCATGGTATCCCAAGGAATGGCAGCTTGAGAAGTGTGGTCCCAGTCCCTGGCTGCGCATGTTCCAGAATGCCAGAGAATGGTGTTTGTAGTGCAGGTACCTAATTGATGGCCATATGATGAATATAAAAGCTTGGAGCTGTGGACTCATTTGGATACCGAAACGTGGTGATATCAGATGCTGGTGCGATGCGCTCAGCAGTCAGCATTGTTGTTACTGAGGATCGAATAAATGGGTTCAGCGAAATAATTAAAAGCAGATTTTATGATTCTTTCTTGCAGCTCTGAATCTTGCTGCTGGTTTGAAACTAGGAATCCTGTAAGGCTAGTAGTGTTTTATTAGGCAGAGGTGAGGAGGCCTCAGGCCTGCAATGCTGTTAATGAGAATAATCCTGTTGGCCCTGCAGTGCTGCTTTGAGAATACTATAGCAGAACAGGACACATGCCCATAATGTGTTGTTCGATTGTCCCA]

[+] EMBL AK106608             [TGCTGAAATTGATATACGATCAATTGTTGTCGGTGATCATACATTGTCTGTCTTGGAGATATGGGGTGCTGAGTACCAGGAACAAGATGCACTTCTGGTGAAGCCTGAGAGCAGAAGCCTGTTAGAGTCACTTTGTGAAAGGGAAAGGGTTTCAATGGCTGTCATTGGTACAATTGATGGATGTGGAAAGATTGTTTTGATTGACAGTGCTGCTATGGAGCATGCCAAGATAAATGGCCTTCCTCCTCCAACCCCTGTTGAGGATCTTGAACTTGAAAAGGTTCTAGGAGATATGCCCCAAAAGACCTTTGAATTCAAGCGAGTGTCTCTAGTCAGCGAGCCCTTAGACATTGCCCCTGGAGTAACAATCATGGATGCTCTGAAGCGAGTATTGAGTCTTCCGTCCATATGTTCTAAGCGTTTCTTAACCACAAAAGTTGACAGGTGTGTGACAGGTCTTGTTGCACAACAGCAGACAGTTGGACCTCTCCAACTTCCTCTCGCAGATGTGGCTGTGATTGCACAGACATATACTGACTTGACAGGTGGTGCCTGTGCCATTGGAGAACAACCAGCAAAAGGTTTACTTAATCCCAAGGCCATGGCAAGACTTGCTGTTGGGGAGGCCTTGACTAATCTGGTCTGGGCTAAAGTTTCATCACTTTCTGATGTCAAAGCAAGTGGTAACTGGATGTATGCTGCAAAGCTTGATGGAGAAGGTGCAGATATGTATGATGCTGCTGTTGCATTGGCTGACTGCATGATTCAACTTGGTATTGCAATCGATGGGGGAAAGGACAGTCTTTCCATGGCAGCTCAATGTGATGGTGAGGTTGTCAAGGCTCCTGGAAATCTGGTCATCAGTGCTTATGTGACATGTCCTGATATAACATTGACAGTAACTCCTGATTTGAAGCTTGGCAATGATGGAGTTTTGCTGCACATTGACCTGGGCAAAGGAAAGCGCAGGCTTGGTGGTTCTGCTCTTGCACAGGCTTTTGATCAAATTGGAAATGACTGCCCAGACATTGATGATGTTCCCTACTTAAAGAAAGCTTTTGAGGCCGTTCAGGAATTGCTTAGTCAGCGCCTTATCTCAGCTGGCCATGACATTAGTGATGGGGGTCTTATTGTGAGTGTTCTTGAGATGGCATTTGCTGGTAATTGCGGTGTTAAGCTGAACATTGACTCAGAAGATTCGGGCCTTCTTCAAGCACTCTTTGCCGAGGAGCTTGGCCTTCTTCTTGAAGCGCACTTGAAAGATCTCAGTGTTGTGAAGCAAAAGCTTGAAGCAGGAGGCATTTCCGCTAATGTAATTGGACAAGTTACAGCATCACCAGATATTGAGCTAGTTGTTGATGGCAGGCTGCATCTCAAGGAAAAAACTTCAGATCTCAGGGATATCTGGGAGGAAACAAGCTTCCAGCTTGAGGGGCTACAACGCCTGAAATCTTGTGTCAGACTTGAGAAAGAAGGACTAAAGCACAGAACATCACCGTCGT GGTCTTTGTCTTTCACTCCCAAATTTACAGATGAAAAACTGCTGACTGCTTCCTCAAAGCCAAAAGTTGCCATCATTCGTGAAGAAGGGAGCAATGGTGATA GGGAGATGGCTGCTGCATTCTATGCTGCTGGATTTGAACCATGGGATATCACAATGTCAGACCTCTTAGCT GGGAAGTCTTCTCTAGAGGAGTACCGTGGGATTGCATTTGTTGGTGGTTTTAGCTATGCAGATGTTCTTGATTCAGCTAAAGGGTGGGCTGCATCAATCAGGTTTAATCAGCCCCTCATACAGCAGTTCCAGAATTTCTATAATAGGCCAGATACTTTCAGCCTTGGAGTGTGCAATGGTTGTCAGCTAATGGCTCTTCTTGGCTGGGTACCAGGATCAGATGTCGGAAGTTCTCTTGGTTCAGGTGGGGACATGTCCCAGCCAAGATTTATTCACAATGAATCTGGTCGTTTTGAGTGTCGGTTTACAAGTGTCTCTATAGGGACCTCTCCTGCTATCATGTTCAAAGGAATGGAAGGTTCTACACTGGGCATTTGGAGTGCTCATGGTGAGGGGAGAGCTTTCTTCCCAGATGAAAATGTTCTAGCTAGTGTTGTGAACTCTAACCTGGCTCCTGTGCGGTACTGTGACGATGCTAATAACATTACCGAAGTCTACCCGTTCAATCCCAATGGCTCTCCCCTTGGCATTGCAGCCCTTTGCTCCCCTGATGGAAGACATCTTGCTATGATGCCACACCCAGAGCGTTGCTTCATGATGTGGCAATATCCATGGTATCCCAAGGAATGGCAGCTTGAGAAGTGTGGTCCCAGTCCCTGGCTGCGCATGTTCCAGAATGCCAGA AATGGTGTTTGTAGTGCAGGTACCTAATTGATGGCCATATGATGAATATAAAAGCTTGGAGCTGTGGACTCATTTGGATACCGAAACGTGGTGATATCAGATGCTGGTGCGATGCGCTCAGCAGTCAGCATTGTTGTTACTGAGGATCGAATAAATGGGTTCAGCGAAATAATTAAAAGCAGATTTTATGATTCTTTCTTGCAGCTCTGAATCTTGCTGCTGGTTTGAAACTAGGAATCCTGTAAGGCTAGTAGTGTTTTATTAGGCAGAGGTGAGGAGGCCTCAGGCCTGCAATGCTGTTAATGAGAATAATCCTGTTGGCCCTGCAGTGCTGCTTTGAGAATACTATAGCAGAACAGGACACATGCCCATAATGTGTTGTTCGATTGTCCCA]
[+] EMBL CB632004             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGATGTCAAAGCAAGTGGCAACTGGATGTATGCTGCAAAGCTTGATGGAGAAGGTGCACATATGTATGATGCTGCTGTTGCATTGGCTGACTGCATGATTCAACTTGGGATTGCAATCGATGGGGGAAAGGACAGTCTTTCCATGGCAGCTCAATGTGATGGTGATGTTGTCAAGGCTCCTGGAAATCTGGTCATCAGTGCTTATGTGACATGTCCTGATATAACATTGACAGTAACTCCTGATATAAACCTTGGCAATGATGGAGTTTTGCTGCACATTGACCTGag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF306654             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGATATAACATTGACAGTAACTCCTGATTTGAAGCTTGGCAATGATGGAGTTTTGCTGCACATTGACCTGGGCAAAGGAAAGCGCAGGCTTGGTGGTTCTGCTCTTGCACAGGCTTTTGATCAAATTGGAAATGACTGCCCAGACATTGATGATGTTCCCTACTTAAAGAAAGCTTTTGAGGCCGTTCAGGAATTGCTTAGTCAGCGCCTTATCTCAGCTGGCCATGACATTAGTGATGGGGGTCTTATTGTGAGTGTTCTTGAGATGGCATTTGCTGGTAATTGCGGTGTTAAGCTGAACATTGACTCAGAAGATTCGGGCCTTCTTCAAGCACTCTTTGCCGAGGAGCTTGGCCTTCTTCTTGAAGTGCACTTGAAAGATCTCAGTGTTGTGAAGCAAAAGCTTGAAGCAGGAGGCATTTCCGCTAATGTAATTGGACAAGTTACAGCATCACCAGATATTGAGCTAGTTGTTGATGGCAGGCTGCATCTCAAGGAAAAAACTTCAGATCTCAGGGATATCTGGGAGGAAACAAGCTTCCAGCTTGAGGGGCTACAACGCCTGAAATCTTGTGTCAGACTTGAGAAAGAAGGACTAAAGCACAGAACATCACCATCGTGGGTCTTTGTCTTTCACTCCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB629812             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTGGTTATGATGGAGTTTTGCTGCACATTGACCTGGGCAAAGGAAAGCGCAGGCTTGGTGGTTCTGCTCTTGCACAGGCTTTTGATCAAATTGGAAATGACTGCCCAGACATTGATGATGTTCCCTACTTAAAGAAAGCTTTTGAGGCCGTTCAGGAATTGCTTAGTCAGCGCCTTATCTCAGCTGGCCATGACATTAGTGATGGGGGTCTTATTGTGAGTGTTCTTGAGATGGCATTTGCTGGTAATTGCGGTGTTAAGCTGAACATTGACTCAGAAGATTCGGGCCTTCTTCAAGCACTCTTTGCCGAGGAGCTTGGCCTTCTTCTTGAAGTGCACTTGAAAGATCTCAGTGTTGTGAAGCAAAAGCTTGAAGCAGGAGGCATTTCCGCTAATGTAATTGGACAAGTTACAGCATCACCAGATATTGAGCTAGTTGTTGATGGCAGGCTGCATCTCAAGGAAAAAACTTCAGATCTCAGGGATATCTGGGAGGAAACAAGCTTCCAGCTTGAGGGGCTACAACGCCTGAAATCTTGTGTCAGACTTGAGAAAGAAGGACTAAAGCACAGAACATCACCATCGT GGTCTTTGTCTTTCACTCCCAAATTTACAGATGAAAAACTGCTGACTGCTTCCTCAAAGCCAAAAGTTGCCATCATTCGTGAAGAAGGGAGCAATGGTGATA GGGAGATGGCTGCTGCATTCTATGCTGCTGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF323676             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              tctaGCCTTCTTCAAGCACTATTTGCCGAGGAGCTTGGCCTTCTACTTGAAGTGCATTTGAAAGATCTGAGTGTTGTGAAACAAAAGCTTCAAGCAGGAGGCATTTCCGCTAATGTAATTGGAAAAGTTACAGCATCACCAGATATTGAGCTGGTTGTTGATGGCAGGCTGCATCTTAAGGAAAAAACTTCAGATCTCAGGGATATCTGGGAGGAAACAAGCTTCCAGCTTGAGGGGCTACAACGTCTGAAATCTTGTGTCAGACTTGAGAAAGAAGGATTAAAGCACAGAACATCACCATCAT GGTCTTTGTCTTTCACTCCCAAATTTACAGATGAAAAACTGCTGACTGCATCCTCAAAGCCAAAAGTTGCCATCCTTCGTGAAGAAGGGAGCAATGGTGATAGGGGAGATGGCTGCTGCATTCTATGCTGCTGGATTCGAACCATGGGATATCACAATGTCAGACCTCTTAGCTGGGGAAGTCTTCTCTAGAGGATTACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB632005             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCAGCCAAGATTTATTCACAATGAATCTGGTCGTTTTGAGTGTCGGTTTACAAGTGTCTCTATAGGGACCTCTCCTGCTATCATGTTCAAAGGAATGGAAGGTTCTACACTGGGCATTTGGAGTGCTCATGGTGAGGGGAGAGCTTTCTTCCCAGATGAAAATGTTCTAGCTAGTGTTGTGAACTCTAACCTGGCTCCTGTGCGGTACTGTGACGATGCTAATAACATTACCGAAGTCTACCCGTTCAATCCCAATGGCTCTCCCCTTGGCATTGCAGCCCTTTGCTCCCCTGATGGAAGACATCTTGCTATGATGCCACACCCAGAGCGTTGCTTCATGATGTGGCAATATCCATGGTATCCCAAGGAATGGCAGCTTGAGAAGTGTGGTCCCAGTCCCTGGCTGCGCATGTTCCAGAATGCCAGAGAATGGTGTTTGTAGTGCAGGTACCTAATTGATGGCCATATGATGAATATAAAAGCTTGGAGCTGTGGACTCATTTGGATACCGAAACGTGGTGATATCAGATGCTGGTGCGATGCGCTCAGCAGTCAGCATTGTTGTTACTGAGGATCGAATAAATGGGTTCAGCGAAATAATTAAAAGCAGATTTTATGATTCTTTCTTGCAGCTCTGAATCTTGCTGCTGGTTTGAAACTAGGAATCCTGTAAGGCTAGTAGTGTTTTATTAGGCAGAGGTGAGGAGGCCTCAGGCCTGCAAAGGGGTTAATGAGAATAATCCTGTTGGCCCTGCAa                                                                 ]
[-] EMBL CB629813             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGACGATGCTAATAACATTACCGAAGTCTACCCGTTCAATCCCAATGGCTCTCCCCTTGGCATTGCAGCCCTTTGCTCCCCTGATGGAAGACATCTTGCTATGATGCCACACCCAGAGCGTTGCTTCATGATGTGGCAATATCCATGGTATCCCAAGGAATGGCAGCTTGAGAAGTGTGGTCCCAGTCCCTGGCTGCGCATGTTCCAGAATGCCAGAGAATGGTGTTTGTAGTGCAGGTACCTAATTGATGGCCATATGATGAATATAAAAGCTTGGAGCTGTGGACTCATTTGGATACCGAAACGTGGTGATATCAGATGCTGGTGCGATGCGCTCAGCAATCAGCATTGTTGTTACTGAGGATCGAATAAATGGGTTCAGCGAAATAATTAAAAGCAGATTTTATGATTCTTTCTTGCAGCTCTGAATCTTGCTGCTGGTTTGAAACTAGGAATCCTGTAAGGCTAGTAGTGTTTTATTAGGCAGAGGTGAGGAGGCCTCAGGCCTGCAATGCTGTTAATGAGAATAATCCTGTTGGCCCTGCAGTGCTGGGGGGAGAATACTATAGCAGAACAGGACACATGCCCATAATGTGTTGTTCGATT      ]




>consensus_11272#0
TGCTGAAATTGATATACGATCAATTGTTGTCGGTGATCATACATTGTCTGTCTTGGAGAT
ATGGGGTGCTGAGTACCAGGAACAAGATGCACTTCTGGTGAAGCCTGAGAGCAGAAGCCT
GTTAGAGTCACTTTGTGAAAGGGAAAGGGTTTCAATGGCTGTCATTGGTACAATTGATGG
ATGTGGAAAGATTGTTTTGATTGACAGTGCTGCTATGGAGCATGCCAAGATAAATGGCCT
TCCTCCTCCAACCCCTGTTGAGGATCTTGAACTTGAAAAGGTTCTAGGAGATATGCCCCA
AAAGACCTTTGAATTCAAGCGAGTGTCTCTAGTCAGCGAGCCCTTAGACATTGCCCCTGG
AGTAACAATCATGGATGCTCTGAAGCGAGTATTGAGTCTTCCGTCCATATGTTCTAAGCG
TTTCTTAACCACAAAAGTTGACAGGTGTGTGACAGGTCTTGTTGCACAACAGCAGACAGT
TGGACCTCTCCAACTTCCTCTCGCAGATGTGGCTGTGATTGCACAGACATATACTGACTT
GACAGGTGGTGCCTGTGCCATTGGAGAACAACCAGCAAAAGGTTTACTTAATCCCAAGGC
CATGGCAAGACTTGCTGTTGGGGAGGCCTTGACTAATCTGGTCTGGGCTAAAGTTTCATC
ACTTTCTGATGTCAAAGCAAGTGGTAACTGGATGTATGCTGCAAAGCTTGATGGAGAAGG
TGCAGATATGTATGATGCTGCTGTTGCATTGGCTGACTGCATGATTCAACTTGGTATTGC
AATCGATGGGGGAAAGGACAGTCTTTCCATGGCAGCTCAATGTGATGGTGAGGTTGTCAA
GGCTCCTGGAAATCTGGTCATCAGTGCTTATGTGACATGTCCTGATATAACATTGACAGT
AACTCCTGATTTGAAGCTTGGCAATGATGGAGTTTTGCTGCACATTGACCTGGGCAAAGG
AAAGCGCAGGCTTGGTGGTTCTGCTCTTGCACAGGCTTTTGATCAAATTGGAAATGACTG
CCCAGACATTGATGATGTTCCCTACTTAAAGAAAGCTTTTGAGGCCGTTCAGGAATTGCT
TAGTCAGCGCCTTATCTCAGCTGGCCATGACATTAGTGATGGGGGTCTTATTGTGAGTGT
TCTTGAGATGGCATTTGCTGGTAATTGCGGTGTTAAGCTGAACATTGACTCAGAAGATTC
GGGCCTTCTTCAAGCACTCTTTGCCGAGGAGCTTGGCCTTCTTCTTGAAGTGCACTTGAA
AGATCTCAGTGTTGTGAAGCAAAAGCTTGAAGCAGGAGGCATTTCCGCTAATGTAATTGG
ACAAGTTACAGCATCACCAGATATTGAGCTAGTTGTTGATGGCAGGCTGCATCTCAAGGA
AAAAACTTCAGATCTCAGGGATATCTGGGAGGAAACAAGCTTCCAGCTTGAGGGGCTACA
ACGCCTGAAATCTTGTGTCAGACTTGAGAAAGAAGGACTAAAGCACAGAACATCACCATC
GTGGTCTTTGTCTTTCACTCCCAAATTTACAGATGAAAAACTGCTGACTGCTTCCTCAAA
GCCAAAAGTTGCCATCATTCGTGAAGAAGGGAGCAATGGTGATAGGGAGATGGCTGCTGC
ATTCTATGCTGCTGGATTTGAACCATGGGATATCACAATGTCAGACCTCTTAGCTGGGAA
GTCTTCTCTAGAGGAGTACCGTGGGATTGCATTTGTTGGTGGTTTTAGCTATGCAGATGT
TCTTGATTCAGCTAAAGGGTGGGCTGCATCAATCAGGTTTAATCAGCCCCTCATACAGCA
GTTCCAGAATTTCTATAATAGGCCAGATACTTTCAGCCTTGGAGTGTGCAATGGTTGTCA
GCTAATGGCTCTTCTTGGCTGGGTACCAGGATCAGATGTCGGAAGTTCTCTTGGTTCAGG
TGGGGACATGTCCCAGCCAAGATTTATTCACAATGAATCTGGTCGTTTTGAGTGTCGGTT
TACAAGTGTCTCTATAGGGACCTCTCCTGCTATCATGTTCAAAGGAATGGAAGGTTCTAC
ACTGGGCATTTGGAGTGCTCATGGTGAGGGGAGAGCTTTCTTCCCAGATGAAAATGTTCT
AGCTAGTGTTGTGAACTCTAACCTGGCTCCTGTGCGGTACTGTGACGATGCTAATAACAT
TACCGAAGTCTACCCGTTCAATCCCAATGGCTCTCCCCTTGGCATTGCAGCCCTTTGCTC
CCCTGATGGAAGACATCTTGCTATGATGCCACACCCAGAGCGTTGCTTCATGATGTGGCA
ATATCCATGGTATCCCAAGGAATGGCAGCTTGAGAAGTGTGGTCCCAGTCCCTGGCTGCG
CATGTTCCAGAATGCCAGAGAATGGTGTTTGTAGTGCAGGTACCTAATTGATGGCCATAT
GATGAATATAAAAGCTTGGAGCTGTGGACTCATTTGGATACCGAAACGTGGTGATATCAG
ATGCTGGTGCGATGCGCTCAGCAGTCAGCATTGTTGTTACTGAGGATCGAATAAATGGGT
TCAGCGAAATAATTAAAAGCAGATTTTATGATTCTTTCTTGCAGCTCTGAATCTTGCTGC
TGGTTTGAAACTAGGAATCCTGTAAGGCTAGTAGTGTTTTATTAGGCAGAGGTGAGGAGG
CCTCAGGCCTGCAATGCTGTTAATGAGAATAATCCTGTTGGCCCTGCAGTGCTGCTTTGA
GAATACTATAGCAGAACAGGACACATGCCCATAATGTGTTGTTCGATTGTCCCA

consensusID : consensus_11272#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 672
fasta sequence

                              [CCTCGAGTTTCCGAGTATCGATAACCTTGATTGCTCTACGAGGCAAGCGGGGCTCTCCACGTTGGCATTGCAGCACTTTGCTCCCCTGATGGAATACCTCTTGTTATGATGCCACGCCCAGAGCGTTGCTTCATGATGTGGCAATATCGGTGGTATCCCAAAGAATGGCCGCTTAAGAAGTGTGGTCCCTGTCCCGGGCTGGGCATGTTCCAGAAGTCCACAGAATGGTGTTCGTAGTGCAGGTACCTAATTGATGGCCATACGATCAATATAAAAGCTTGGATCTGTGGGCTCATTTGCAAAACGAAAAGTGGTGATTTCACATAGTGGTGCGATGCGATCACCAGTCAAAATTGATGTTGGTGAGGTTCGAATAAATGGGTTAAACTGGATAATTAAAAGCAGATTGTATGCTTCTTTCACGCAGCTGTGAATTTTGCCCCCGGTTTGATCCTAGGAATACTGTAAGGCTGGTAGTGTTTTATTAGGCAAAGGCGAGGAGGACTCAGGCCTGCAATGCTGATAATGAGAATCCTTCTGTAGGCCTTTCAGTGGTGCTTTGAGAATAGTATAGCAGAACCGGGCGCATGTCCTTAATGTGCGTTAAGATTGTTCCCTGATACAGTCATCTGTCCTCAATGGCAAGCCGGTTTCCAAAAAAAAAAAAAAAAA]

[-] EMBL CA762958             [CCTCGAGTTTCCGAGTATCGATAACCTTGATTGCTCTACGAGGCAAGCGGGGCTCTCCACGTTGGCATTGCAGCACTTTGCTCCCCTGATGGAATACCTCTTGTTATGATGCCACGCCCAGAGCGTTGCTTCATGATGTGGCAATATCGGTGGTATCCCAAAGAATGGCCGCTTAAGAAGTGTGGTCCCTGTCCCGGGCTGGGCATGTTCCAGAAGTCCACAGAATGGTGTTCGTAGTGCAGGTACCTAATTGATGGCCATACGATCAATATAAAAGCTTGGATCTGTGGGCTCATTTGCAAAACGAAAAGTGGTGATTTCACATAGTGGTGCGATGCGATCACCAGTCAAAATTGATGTTGGTGAGGTTCGAATAAATGGGTTAAACTGGATAATTAAAAGCAGATTGTATGCTTCTTTCACGCAGCTGTGAATTTTGCCCCCGGTTTGATCCTAGGAATACTGTAAGGCTGGTAGTGTTTTATTAGGCAAAGGCGAGGAGGACTCAGGCCTGCAATGCTGATAATGAGAATCCTTCTGTAGGCCTTTCAGTGGTGCTTTGAGAATAGTATAGCAGAACCGGGCGCATGTCCTTAATGTGCGTTAAGATTGTTCCCTGATACAGTCATCTGTCCTCAATGGCAAGCCGGTTTCCAAAAAAAAAAAAAAAAA]




>consensus_11272#1
CCTCGAGTTTCCGAGTATCGATAACCTTGATTGCTCTACGAGGCAAGCGGGGCTCTCCAC
GTTGGCATTGCAGCACTTTGCTCCCCTGATGGAATACCTCTTGTTATGATGCCACGCCCA
GAGCGTTGCTTCATGATGTGGCAATATCGGTGGTATCCCAAAGAATGGCCGCTTAAGAAG
TGTGGTCCCTGTCCCGGGCTGGGCATGTTCCAGAAGTCCACAGAATGGTGTTCGTAGTGC
AGGTACCTAATTGATGGCCATACGATCAATATAAAAGCTTGGATCTGTGGGCTCATTTGC
AAAACGAAAAGTGGTGATTTCACATAGTGGTGCGATGCGATCACCAGTCAAAATTGATGT
TGGTGAGGTTCGAATAAATGGGTTAAACTGGATAATTAAAAGCAGATTGTATGCTTCTTT
CACGCAGCTGTGAATTTTGCCCCCGGTTTGATCCTAGGAATACTGTAAGGCTGGTAGTGT
TTTATTAGGCAAAGGCGAGGAGGACTCAGGCCTGCAATGCTGATAATGAGAATCCTTCTG
TAGGCCTTTCAGTGGTGCTTTGAGAATAGTATAGCAGAACCGGGCGCATGTCCTTAATGT
GCGTTAAGATTGTTCCCTGATACAGTCATCTGTCCTCAATGGCAAGCCGGTTTCCAAAAA
AAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11272#0      TGCTGAAATTGATATACGATCAATTGTTGTCGGTGATCATACATTGTCTGTCTTGGAGAT 60
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      ATGGGGTGCTGAGTACCAGGAACAAGATGCACTTCTGGTGAAGCCTGAGAGCAGAAGCCT 120
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      GTTAGAGTCACTTTGTGAAAGGGAAAGGGTTTCAATGGCTGTCATTGGTACAATTGATGG 180
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      ATGTGGAAAGATTGTTTTGATTGACAGTGCTGCTATGGAGCATGCCAAGATAAATGGCCT 240
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      TCCTCCTCCAACCCCTGTTGAGGATCTTGAACTTGAAAAGGTTCTAGGAGATATGCCCCA 300
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      AAAGACCTTTGAATTCAAGCGAGTGTCTCTAGTCAGCGAGCCCTTAGACATTGCCCCTGG 360
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      AGTAACAATCATGGATGCTCTGAAGCGAGTATTGAGTCTTCCGTCCATATGTTCTAAGCG 420
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      TTTCTTAACCACAAAAGTTGACAGGTGTGTGACAGGTCTTGTTGCACAACAGCAGACAGT 480
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      TGGACCTCTCCAACTTCCTCTCGCAGATGTGGCTGTGATTGCACAGACATATACTGACTT 540
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      GACAGGTGGTGCCTGTGCCATTGGAGAACAACCAGCAAAAGGTTTACTTAATCCCAAGGC 600
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      CATGGCAAGACTTGCTGTTGGGGAGGCCTTGACTAATCTGGTCTGGGCTAAAGTTTCATC 660
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      ACTTTCTGATGTCAAAGCAAGTGGTAACTGGATGTATGCTGCAAAGCTTGATGGAGAAGG 720
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      TGCAGATATGTATGATGCTGCTGTTGCATTGGCTGACTGCATGATTCAACTTGGTATTGC 780
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      AATCGATGGGGGAAAGGACAGTCTTTCCATGGCAGCTCAATGTGATGGTGAGGTTGTCAA 840
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      GGCTCCTGGAAATCTGGTCATCAGTGCTTATGTGACATGTCCTGATATAACATTGACAGT 900
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      AACTCCTGATTTGAAGCTTGGCAATGATGGAGTTTTGCTGCACATTGACCTGGGCAAAGG 960
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      AAAGCGCAGGCTTGGTGGTTCTGCTCTTGCACAGGCTTTTGATCAAATTGGAAATGACTG 1020
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      CCCAGACATTGATGATGTTCCCTACTTAAAGAAAGCTTTTGAGGCCGTTCAGGAATTGCT 1080
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      TAGTCAGCGCCTTATCTCAGCTGGCCATGACATTAGTGATGGGGGTCTTATTGTGAGTGT 1140
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      TCTTGAGATGGCATTTGCTGGTAATTGCGGTGTTAAGCTGAACATTGACTCAGAAGATTC 1200
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      GGGCCTTCTTCAAGCACTCTTTGCCGAGGAGCTTGGCCTTCTTCTTGAAGTGCACTTGAA 1260
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      AGATCTCAGTGTTGTGAAGCAAAAGCTTGAAGCAGGAGGCATTTCCGCTAATGTAATTGG 1320
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      ACAAGTTACAGCATCACCAGATATTGAGCTAGTTGTTGATGGCAGGCTGCATCTCAAGGA 1380
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      AAAAACTTCAGATCTCAGGGATATCTGGGAGGAAACAAGCTTCCAGCTTGAGGGGCTACA 1440
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      ACGCCTGAAATCTTGTGTCAGACTTGAGAAAGAAGGACTAAAGCACAGAACATCACCATC 1500
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      GTGGTCTTTGTCTTTCACTCCCAAATTTACAGATGAAAAACTGCTGACTGCTTCCTCAAA 1560
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      GCCAAAAGTTGCCATCATTCGTGAAGAAGGGAGCAATGGTGATAGGGAGATGGCTGCTGC 1620
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      ATTCTATGCTGCTGGATTTGAACCATGGGATATCACAATGTCAGACCTCTTAGCTGGGAA 1680
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      GTCTTCTCTAGAGGAGTACCGTGGGATTGCATTTGTTGGTGGTTTTAGCTATGCAGATGT 1740
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      TCTTGATTCAGCTAAAGGGTGGGCTGCATCAATCAGGTTTAATCAGCCCCTCATACAGCA 1800
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      GTTCCAGAATTTCTATAATAGGCCAGATACTTTCAGCCTTGGAGTGTGCAATGGTTGTCA 1860
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      GCTAATGGCTCTTCTTGGCTGGGTACCAGGATCAGATGTCGGAAGTTCTCTTGGTTCAGG 1920
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      TGGGGACATGTCCCAGCCAAGATTTATTCACAATGAATCTGGTCGTTTTGAGTGTCGGTT 1980
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      TACAAGTGTCTCTATAGGGACCTCTCCTGCTATCATGTTCAAAGGAATGGAAGGTTCTAC 2040
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      ACTGGGCATTTGGAGTGCTCATGGTGAGGGGAGAGCTTTCTTCCCAGATGAAAATGTTCT 2100
consensus_11272#1      ------------------------------------------------------------
                                                                                   

consensus_11272#0      AGCTAGTGTTGTGAACTCTAACCTGGCTCCTGTGCGGTACTGTGACGATGCTAATAACAT 2160
consensus_11272#1      ---------------------------------------CCTCGAGTTTCCGAGTATCGA 21
                                                              *   **   * * * ** *  

consensus_11272#0      TACCGAAGTCTACCCGTTCAATCCCAATGGCTCTCCCC---TTGGCATTGCAGCCCTTTG 2217
consensus_11272#1      TAACCTTGATTGCTC-TACGAGGCAAGCGGGGCTCTCCACGTTGGCATTGCAGCACTTTG 80
                       ** *   *  * * * * * *  * *  **  *** **   ************* *****

consensus_11272#0      CTCCCCTGATGGAAGACATCTTGCTATGATGCCACACCCAGAGCGTTGCTTCATGATGTG 2277
consensus_11272#1      CTCCCCTGATGGAATACCTCTTGTTATGATGCCACGCCCAGAGCGTTGCTTCATGATGTG 140
                       ************** ** ***** *********** ************************

consensus_11272#0      GCAATATCCATGGTATCCCAAGGAATGGCAGCTTGAGAAGTGTGGTCCCAGTCCCTGGCT 2337
consensus_11272#1      GCAATATCGGTGGTATCCCAAAGAATGGCCGCTTAAGAAGTGTGGTCCCTGTCCCGGGCT 200
                       ********  *********** ******* **** ************** ***** ****

consensus_11272#0      GCGCATGTTCCAGAATGCCAGAGAATGGTGTTTGTAGTGCAGGTACCTAATTGATGGCCA 2397
consensus_11272#1      GGGCATGTTCCAGAAGTCCACAGAATGGTGTTCGTAGTGCAGGTACCTAATTGATGGCCA 260
                       * *************  *** *********** ***************************

consensus_11272#0      TATGATGAATATAAAAGCTTGGAGCTGTGGACTCATTTGGATACCGAAACGTGGTGATAT 2457
consensus_11272#1      TACGATCAATATAAAAGCTTGGATCTGTGGGCTCATTTGCAAAACGAAAAGTGGTGATTT 320
                       ** *** **************** ****** ******** * * ***** ******** *

consensus_11272#0      CAGATGCTGGTGCGATGCGCTCAGCAGTCAGCATTGTTGTTACTGAGGATCGAATAAATG 2517
consensus_11272#1      CACATAGTGGTGCGATGCGATCACCAGTCAAAATTGATGTTGGTGAGGTTCGAATAAATG 380
                       ** **  ************ *** ******  **** ****  ***** ***********

consensus_11272#0      GGTTCAGCGAAATAATTAAAAGCAGATTTTATGATTCTTTCTTGCAGCTCTGAATCTTGC 2577
consensus_11272#1      GGTTAAACTGGATAATTAAAAGCAGATTGTATGCTTCTTTCACGCAGCTGTGAATTTTGC 440
                       **** * *   ***************** **** *******  ****** ***** ****

consensus_11272#0      TGCTGGTTTGAAACTAGGAATCCTGTAAGGCTAGTAGTGTTTTATTAGGCAGAGGTGAGG 2637
consensus_11272#1      CCCCGGTTTGATCCTAGGAATACTGTAAGGCTGGTAGTGTTTTATTAGGCAAAGGCGAGG 500
                         * *******  ******** ********** ****************** *** ****

consensus_11272#0      AGGCCTCAGGCCTGCAATGCTGTTAATGAGAATAATCCTGTTGGCCCTGCAGTGCTGCTT 2697
consensus_11272#1      AGGACTCAGGCCTGCAATGCTGATAATGAGAATCCTTCTGTAGGCCTTTCAGTGGTGCTT 560
                       *** ****************** **********  * **** **** * ***** *****

consensus_11272#0      TGAGAATACTATAGCAGAACAGGACACATGCCCATAATGTGTTGTTCGATTGTCCCA--- 2754
consensus_11272#1      TGAGAATAGTATAGCAGAACCGGGCGCATGTCCTTAATGTGCGTTAAGATTGTTCCCTGA 620
                       ******** *********** ** * **** ** *******   *  ****** **    

consensus_11272#0      ----------------------------------------------------
consensus_11272#1      TACAGTCATCTGTCCTCAATGGCAAGCCGGTTTCCAAAAAAAAAAAAAAAAA 672