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Oryza sativa
cluster # 11275 cluster # 11275       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11275#0 length = 1396 sequences # 8  

consensusID : consensus_11275#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1396
fasta sequence
                              [AAAAAGAAAACGTAGAAAAGTTTTTCGCAGCCGCGGCGGCCAGCCAACCAACCAACCCAACCAGCCAACGCGGATCGCCTCTCGAGCACCAAACCCTACCCGGATCGCCAGCGCAGCCACTCACCAAGCCTTCCCCCCCACCCTGCTTCTGCTGCTCGCGCCGGGATTCTTGGCTCGTCTGCTCTTCGCGGTCGGTGTCGCGCCATCAGCAACCATGGAGGGCGAGAGGAGGGCGGTGAGGACGGTGCGGGTGCGGAACATCTCAGATCTGGCAGGGGAGCGGGAGGTGCGGGAGTTCTTCTCCTTCTCCGGCGAAATCGAGCACGTCGACATCAGATGCGATGGGGTGGCGACGGGGAGGACGGCCTACGTCACGTTCAAGGATCCCAAGGCCCTAGAGATCGCGCTGCTGCTGTCGGGAGCAACAATTGTGGATC-GGGTTGTCAACATAACCCCTGCTGAAGACTACATCTACATCCCTGTTACT-GACCAGCAACTTGTGGTCAGTGAGGTGGTCGGTGAGGTGACAAGTACGGCTCCTAATGCAGATTTGGACCAACCTACCGAGGCCAATGCCAGCCCCACTACTGGCCGTGTTTATGTCAGCAAGGCTCATGATGTCATGACAACTGTGATTGCAAGGGGTTCAGCAATGCGACAAGATGCTGTGAACAAAGCTAAAGCATTCGATGAGAAACATCAATTGAGGGCAAATGCATCGGCCAAGATCAATTCCTTTGATAAGCGTGTTGG-AATTTCAGA-GAAGATAAACAGCGGGATAACAGTTGTAAATGAGAAAGTGAAATCTGTAGACCAAAGGCTACATGTTTCTGACAAAACAATGGCTGCTTTGCTGGCTGCAGAGCGCAAGCTAAATGACACTGGCTCTGCTGTGAAAACCAACAGGTATGTGTCTGCTGGAACAAGCTGGCTAAATGGTGCCTTCAGCAAGGTTGCTAAGGCTGGTCATGTTGCTGGCT-CAAGAACAAGAGAGAAGTTCCAAATAGCTGTGTCCAATCTAACAGCGAAAGGTCCTGCTGTTGTTGCTTGAGCTGCTGTGGTCCTGGTTTTGGAAGCTCTTCTTCCTGGGAGAAAAGTCGATCATAAAGCATCGTGCAATCACCTTCACTCAGAGTGTATCGACAGTGTGGCTTGTAACTGTGTATTTCACTGTTCCCATTTTTTCTTCGGGGAGGTTTTTCCAGTGAGCCATGTCAGATTTGGTACATAGAGGATCTCATGTTTTTGGAACTTTAGAGTCGCCATTCTTTTCTTTGTAGTGTCGATGTTAAATTGATTATAGGTGATAGTGATATTCTGGGCCATATGTTGTTGACTCGGTATGGATTATTGGTTATTGAATGTCTATGCTTGTGCCAAAAAAAAAAAAAAAAAA]

[+] EMBL AK061165             [AAAAAGAAAACGTAGAAAAGTTTTTCGCAGCCGCGGCGGCCAGCCAACCAACCAACCCAACCAGCCAACGCGGATCGCCTCTCGAGCACCAAACCCTACCCGGATCGCCAGCGCAGCCACTCACCAAGCCTTCCCCCCCACCCTGCTTCTGCTGCTCGCGCCGGGATTCTTGGCTCGTCTGCTCTTCGCGGTCGGTGTCGCGCCATCAGCAACCATGGAGGGCGAGAGGAGGGCGGTGAGGACGGTGCGGGTGCGGAACATCTCAGATCTGGCAGGGGAGCGGGAGGTGCGGGAGTTCTTCTCCTTCTCCGGCGAAATCGAGCACGTCGACATCAGATGCGATGGGGTGGCGACGGGGAGGACGGCCTACGTCACGTTCAAGGATCCCAAGGCCCTAGAGATCGCGCTGCTGCTGTCGGGAGCAACAATTGTGGATC GGGTTGTCAACATAACCCCTGCTGAAGACTACATCTACATCCCTGTTACT GACCAGCAACTTGTGGTCAGTGAGGTGGTCGGTGAGGTGACAAGTACGGCTCCTAATGCAGATTTGGACCAACCTACCGAGGCCAATGCCAGCCCCACTACTGGCCGTGTTTATGTCAGCAAGGCTCATGATGTCATGACAACTGTGATTGCAAGGGGTTCAGCAATGCGACAAGATGCTGTGAACAAAGCTAAAGCATTCGATGAGAAACATCAATTGAGGGCAAATGCATCGGCCAAGATCAATTCCTTTGATAAGCGTGTTGG AATTTCAGA GAAGATAAACAGCGGGATAACAGTTGTAAATGAGAAAGTGAAATCTGTAGACCAAAGGCTACATGTTTCTGACAAAACAATGGCTGCTTTGCTGGCTGCAGAGCGCAAGCTAAATGACACTGGCTCTGCTGTGAAAACCAACAGGTATGTGTCTGCTGGAACAAGCTGGCTAAATGGTGCCTTCAGCAAGGTTGCTAAGGCTGGTCATGTTGCTGGCT CAAGAACAAGAGAGAAGTTCCAAATAGCTGTGTCCAATCTAACAGCGAAAGGTCCTGCTGTTGTTGCTTGAGCTGCTGTGGTCCTGGTTTTGGAAGCTCTTCTTCCTGGGAGAAAAGTCGATCATAAAGCATCGTGCAATCACCTTCACTCAGAGTGTATCGACAGTGTGGCTTGTAACTGTGTATTTCACTGTTCCCATTTTTTCTTCGGGGAGGTTTTTCCAGTGAGCCATGTCAGATTTGGTACATAGAGGATCTCATGTTTTTGGAACTTTAGAGTCGCCATTCTTTTCTTTGTAGTGTCGATGTTAAATTGATTATAGGTGATAGTGATATTCTGGGCCATATGTTGTTGACTCGGTATGGATTATTGGTTATTGAATGTCTATGCTTGTGCCAtgtt             ]
[+] EMBL CF276901             [    AGAAAACGTAGAAAAGTTTTTCGCAGCCGCGGCGGCCAGCCAACCAACCAACCCAACCAGCCAACGCGGATCGCCTCTCGAGCACCAAACCCTACCCGGATCGCCAGCGCAGCCACTCACCAAGCCTTCCCCCCCACCCTGCTTCTGCTGCTCGCGCCGGGATTCTTGGCTCGTCTGCTCTTCGCGGTCGGTGTCGCGCCATCAGCAACCATGGAGGGCGAGAGGAGGGCGGTGAGGACGGTGCGGGTGCGGAACATCTCAGATCTGGCAGGGGAGCGGGAGGTGCGGGAGTTCTTCTCCTTCTCCGGCGAAATCGAGCACGTCGACATCA ATGCGATGGGG GGCGAC GGGAGGACGGCCTACGTCACGTTCAAGGATCCCAAGGCCCTAGAGATCGCGCTGCTGCTGTCGGGAGCAACAATTGTGGATCGGGGTTGTCAACATAACCCCTGCTGAAGACTACATCTACATCCCTGTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF298683             [                                                     AACCCAACCAGCCAACGCGGATCGCCTCTCGAGCACCAAACCCTACCCGGATCGCCAGCGCAGCCACTCACCAAGCCTTCCCCCCCACCCTGCTTCTGCTGCTCGCGCCGGGATTCTTGGCTCGTCTGCTCTTCGCGGTCGGTGTCGCGCCATCAGCAACCATGGAGGGCGAGAGGAGGGCGGTGAGGACGGTGCGGGTGCGGAACATCTCAGATCTGGCAGGGGAGCGGGAGGTGCGGGAGTTCTTCTCCTTCTCCGGCGAAATCGAGCACGTCGACATCAGATGCGATGGGGTGGCGACGGGGAGGACGGCCTACGTCACGTTCAAGGATCCCAAGGCCCTAGAGATCGCGCTGCTGCTGTCGGGAGCAACAATTGTGGATC GGGTTGTCAACATAACCCCTGCTGAAGACTACATCTACATCCCTGTTACT GACCAGCAACTTGTGGTCAGTGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL C26286               [                                                                            GCCTCTCGAGCACCAAACCCTACCCGGTTCGCNAGCGCA NCACTCACCAAGCCTTCCCCCCCACCCTGCTTCTGCTGCTCGCGCCGGGATTCTTGGCTCGTNTGCTCTTCGCGGTCGGTGTCGCGCCATCAGCAACCATGGAGGGCGAGAGGAGGGCGGTGAGGACGGTGCGGGTGCGGAACATCTCANATCTGGCAGGGGAGCGGGAGGTGCGGGAGTTCTTCTCCTTCTCCGGCGAAATCGAGCACGTCGACATCAGATGCNATGGGGTGGCGACGGGGAGGACGGCCTACGTCACGTTCAAGGNTCCCAAGGCCCTAGAGATCGCGCTGCTGCTGTCGGGAGCAACAATTGTGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL C28004               [                                                                                                                                                                                 TCTGCTCTTCGCGGTCGGTGTCGCGCCATCAGCAACCATGGAGGGCGAGAGGAGGGCGGTGAGGACGGTGCGGGTGCGGAACATCTCANATCTGGCAGGGGAGCGGGAGGTGCGGGAGTTCTTCTCCTTCTCCGGCGAAATCGAGCACGTCGACATCAGATGCNATGGGGTGGCGACGGGGAGGACGGCCTACGTCACGTTCAAGGATCCCAAGGCCCTAGAGATCGCGCTGCTGCTGTCGGGAGCAACAATTGTGGATC GGGTTGTCAACATAACCCCTGCTGAAGACTACATCTACATCCCTGTTACTNGACCAGCAACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU092795             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        gAACATCAATTGAGGNCAAATGCATCGCCCAAGATCAATCCNTTTGATAAGCGTGTTGGAAATTTCAGAGGAAGATAAACAGCGGGATAACAGTTGTAAATGAGAAAGTGAAATCTGTAGACCAAAGGCTACATGTTTCTGACAAAACAATGGCTGCTTTGCTGGCTGCAGAGCGCAAGCTAAATGACACTGGCTCTGCTGTGAAAACCAACAGGTATGTGTCTGCTGGAACAAGCTGGCTAAATGGTNCCTTCAGCAAGGTTGCTAAGGCTGGTCATGTTGCTGGCT CAAGAACAAGAGAGAAGTTCCAAATAGCTGTGTCCAATCTAACAGCGAAAGGTCCTGCTGTTGTTGCTTGAGCTGCTGTGGTCCTGGTTTTGGAAGCTCTTCTTCCTGGGAGAAAAGTCGATCATAAAGCATCGTGCAATCACCTTCACTCAGAGTGTATCGACAGTGTGGCTTGTAACTGTGTATTTCACTGTTCCCATTTTTTCTTCGGGGAGGTTTTTCCAGTGAGCCATGTCAGATTTGGTACATAGAGGATCTCATGTTTTTGGAACTTTAGAGTCGCCATTCTTTTCTTTGTAGTGTCGATGTTAAATTGATTATAGGTGATAGTGATATTCTGGGCCATATGTTGTTGACTCGGTATGGATTATTGGTTATTGAATGTCTATGCTTGTGCCAAAAAAAAAAA       ]
[+] EMBL AU100686             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACAAGCTGGCTAAATGGTGCCTTCAGCAAGGTTGCTAAGGCTGGTCATNTTGCTGGCTCCAAGAACAAGAGAGAAGTTCCAAATAGCTGTGNCCAATCTAACAGCGAAAGGTCCTGCTGTTGTTGCTTGAGCTGCTGTGGTCCTGGTTTTGGAAGCTCTTCTTCCTGGGAGAAAAGTCGATCATAAAGCATCGTGCAATCNCCTTCACTCAGAGTGTANCGACAGTGTGGCTTGTAACTGTGTATTTCACTGTTCCCATTTTTTCTNCGGGGAGGTTTTTCCAGTGAGCCATGTCNGATTTNGTACATAGAGGATCTCATGTTTTTGGAACTTTAGAGNCGCCATTCTTTTCTTTGTAGTGTCGATGTTAAATTGATTATAGGTGATAGTGNTATTCTGGGCCATATGTTGTTGANTCGGTATGGATTATTGGTTATTGAATGTCTATGCTTGTGCCAAAAAAAAAAAAAA    ]
[-] EMBL CF276902             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCTGCTGTTGTTGCTTGAGCTGCTGTGGTCCTGGTTTTGGAAGCTCTTCTTCCTGGGAGAAAAGTCGATCATAAAGCATCGTGCAATCCCCTTCACTCAGAGTGTATCGACAGTGTGGCTTGTAACTGTGTATTTCACTGTTCCCATTTTTTCTTCGGGGAGGTTTTTCCAGTGAGCCATGTCAGATTTGGTACATAGAGGATTTCATGTTTTTGGAACTTTAGAGTCGCCATTCTTTTCTTTGTAGTGTCGATGTTAAATTGATTATAGGTGATAGTGATATTCTGGGCCATATGTTGTTGACTCGGTATGGATTATTGGTTATTGAATGTCTATGCTTGTGCCAAAAAAAAAAAAAAAAAA]


>consensus_11275#0 AAAAAGAAAACGTAGAAAAGTTTTTCGCAGCCGCGGCGGCCAGCCAACCAACCAACCCAA CCAGCCAACGCGGATCGCCTCTCGAGCACCAAACCCTACCCGGATCGCCAGCGCAGCCAC TCACCAAGCCTTCCCCCCCACCCTGCTTCTGCTGCTCGCGCCGGGATTCTTGGCTCGTCT GCTCTTCGCGGTCGGTGTCGCGCCATCAGCAACCATGGAGGGCGAGAGGAGGGCGGTGAG GACGGTGCGGGTGCGGAACATCTCAGATCTGGCAGGGGAGCGGGAGGTGCGGGAGTTCTT CTCCTTCTCCGGCGAAATCGAGCACGTCGACATCAGATGCGATGGGGTGGCGACGGGGAG GACGGCCTACGTCACGTTCAAGGATCCCAAGGCCCTAGAGATCGCGCTGCTGCTGTCGGG AGCAACAATTGTGGATCGGGTTGTCAACATAACCCCTGCTGAAGACTACATCTACATCCC TGTTACTGACCAGCAACTTGTGGTCAGTGAGGTGGTCGGTGAGGTGACAAGTACGGCTCC TAATGCAGATTTGGACCAACCTACCGAGGCCAATGCCAGCCCCACTACTGGCCGTGTTTA TGTCAGCAAGGCTCATGATGTCATGACAACTGTGATTGCAAGGGGTTCAGCAATGCGACA AGATGCTGTGAACAAAGCTAAAGCATTCGATGAGAAACATCAATTGAGGGCAAATGCATC GGCCAAGATCAATTCCTTTGATAAGCGTGTTGGAATTTCAGAGAAGATAAACAGCGGGAT AACAGTTGTAAATGAGAAAGTGAAATCTGTAGACCAAAGGCTACATGTTTCTGACAAAAC AATGGCTGCTTTGCTGGCTGCAGAGCGCAAGCTAAATGACACTGGCTCTGCTGTGAAAAC CAACAGGTATGTGTCTGCTGGAACAAGCTGGCTAAATGGTGCCTTCAGCAAGGTTGCTAA GGCTGGTCATGTTGCTGGCTCAAGAACAAGAGAGAAGTTCCAAATAGCTGTGTCCAATCT AACAGCGAAAGGTCCTGCTGTTGTTGCTTGAGCTGCTGTGGTCCTGGTTTTGGAAGCTCT TCTTCCTGGGAGAAAAGTCGATCATAAAGCATCGTGCAATCACCTTCACTCAGAGTGTAT CGACAGTGTGGCTTGTAACTGTGTATTTCACTGTTCCCATTTTTTCTTCGGGGAGGTTTT TCCAGTGAGCCATGTCAGATTTGGTACATAGAGGATCTCATGTTTTTGGAACTTTAGAGT CGCCATTCTTTTCTTTGTAGTGTCGATGTTAAATTGATTATAGGTGATAGTGATATTCTG GGCCATATGTTGTTGACTCGGTATGGATTATTGGTTATTGAATGTCTATGCTTGTGCCAA AAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)