cluster # 1128

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Oryza sativa
cluster # 1128 cluster # 1128 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1128#0 length = 533 sequences # 2

consensusID : consensus_1128#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 533
fasta sequence

                              [TCAAGCAATCCAGCAACTTGGCACTGAATTACTGACACATCTTCTAGAGCAGGAGCATTTCCAACAGGATATCACTACAAAAAATGCAGTTGTCCCTCTGGTGCAGCTTGCTGGTATTGGAATCTTGAGTTTACAACAGACTGCAGTTAAAGCGCTTGAGAGCATATCTCAGAGTTGGCCTAAGGCTGTAGCAGATGCAGGTGGAATTCTTGAACTTTCAAAGGTAATTGTCCAAGATGATCCTCAGCCAAGTCAAGCATTATGGGACTCTGCAGCACTTGTATTATGTAATGTTTTGCGCTATAGCTCTGATAACTATGTCCAAGTGTCAATAGCTGTACTTGTAAGACTGCTGAATTCCACCATCGAGAGTACTGTTACAATAGCTCTGAATGCTCTTCTTGTGCAAGAGAAAAGTAAGTCACGCTGTGCTTTANCCATGGCTGAGGC-T-GGGGCTGTGCGTGCTCTGTTAAAGCTCCTTAAGAGCCATCGTTGTGAGGAATCCGCTGCAAGATTGCTTGAAGCTCTGATAA]

[+] EMBL CF322937             [TCAAGCAATCCAGCAACTTGGCACTGAATTACTGACACATCTTCTAGAGCAGGAGCATTTCCAACAGGATATCACTACAAAAAATGCAGTTGTCCCTCTGGTGCAGCTTGCTGGTATTGGAATCTTGAGTTTACAACAGACTGCAGTTAAAGCGCTTGAGAGCATATCTCAGAGTTGGCCTAAGGCTGTAGCAGATGCAGGTGGAATTCTTGAACTTTCAAAGGTAATTGTCCAAGATGATCCTCAGCCAAGTCAAGCATTATGGGACTCTGCAGCACTTGTATTATGTAATGTTTTGCGCTATAGCTCTGATAACTATGTCCAAGTGTCAATAGCTGTACTTGTAAGACTGCTGAATTCCACCATCGAGAGTACTGTTACAATAGCTCTGAATGCTCTTCTTGTGCAAGAGAAAAGTAAGTCACGCTGTGCTTTANCCATGGCTGAGGC T GGGGCTGTGCGTGCTCTGTTAAAGCTCCTTAAGAGCCATCGTTGTGAGGAATCCGCTGCAAGATTGCTTGAAGCTCTGATAA]
[+] EMBL CF323975             [TCAAGCAATCCAGCAACTTGGCACTGAATTACTGACACATCTTCTAGAGCAGGAGCATTTCCAACAGGATATCACTACAAAAAATGCAGTTGTCCCTCTGGTGCAGCTTGCTGGTATTGGAATCTTGAGTTTACAACAGACTGCAGTTAAAGCGCTTGAGAGCATATCTCAGAGTTGGCCTAAGGCTGTAGCAGATGCAGGTGGAATTCTTGAACTTTCAAAGGTAATTGTCCAAGATGATCCTCAGCCAAGTCAAGCATTATGGGACTCTGCAGCACTTGTATTATGTAATGTTTTGCGCTATAGCTCTGATAACTATGTCCAAGTGTCAATAGCTGTACTTGTAAGACTGCTGAATTCCACCATCGAGAGTACTGTTACAATAGCTCTGAATGCTCTTCTTGTGCAAGAGAAAAGTAAGTCACGCTGTGCTTTAGCCATGGCTGAGGCNTGGGGGCTGTGCGTGCTCTGTTAAAGCTCCTTAAGAGCCATCGTTGTGAGGAATCCGCTGCAAGATTGCTTGAAGCT       ]




>consensus_1128#0
TCAAGCAATCCAGCAACTTGGCACTGAATTACTGACACATCTTCTAGAGCAGGAGCATTT
CCAACAGGATATCACTACAAAAAATGCAGTTGTCCCTCTGGTGCAGCTTGCTGGTATTGG
AATCTTGAGTTTACAACAGACTGCAGTTAAAGCGCTTGAGAGCATATCTCAGAGTTGGCC
TAAGGCTGTAGCAGATGCAGGTGGAATTCTTGAACTTTCAAAGGTAATTGTCCAAGATGA
TCCTCAGCCAAGTCAAGCATTATGGGACTCTGCAGCACTTGTATTATGTAATGTTTTGCG
CTATAGCTCTGATAACTATGTCCAAGTGTCAATAGCTGTACTTGTAAGACTGCTGAATTC
CACCATCGAGAGTACTGTTACAATAGCTCTGAATGCTCTTCTTGTGCAAGAGAAAAGTAA
GTCACGCTGTGCTTTANCCATGGCTGAGGCTGGGGCTGTGCGTGCTCTGTTAAAGCTCCT
TAAGAGCCATCGTTGTGAGGAATCCGCTGCAAGATTGCTTGAAGCTCTGATAA

clustalw multiple alignements is not computed in this case