cluster # 11281

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Oryza sativa
cluster # 11281 cluster # 11281 Sequences # 8 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11281#0 length = 1336 sequences # 6

consensus_11281#1 length = 426 sequences # 1
consensus_11281#2 length = 270 sequences # 1

consensusID : consensus_11281#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1336
fasta sequence

                              [AATTCTGTATTCTTTTTTCTTCCGATCATATACACATTTGTTGGAACATCAACAAACAAAATGTTGGGAATAGCAGTATATCAAAACCTCACAGCTCAATATCTGAGCTAACCTATCCGATTGTATAAATTACTCCCGCCCACGCCTTTTTACAATATAAACCTAATCCACAGACTAATCATGGAAACAAACCAACCAGAGTGCTCAACATTACCAGGACAAGCAATGAATGAAATAAATGATATTAGACCATTAGTACGAAGAACTGCTCAAGTAAGGATTCACAAGCTACAAAAGGAGAG-AAAAAAAATGAAAGAAATAACTCAAATGTATCATAACTAAGGCCAGGCCTTCTTCATGCAGAGACATGTATATGTAGATGCTAACTTTTACAGAGAAGCTACCTCGGTGGAGCGGCTGCATTTCACACAAAGTTGGATCAAGCAATGAGTCCTCACCCGGCGTTGTGCGGCCTACTGAGGTAGTCGAGGATTTCTGTCCGGGTGCGCACAACCCTGTGGAACATCTCCCGCACCTGGCGCTCAAGAGGGTCCAGCCCATCCTTGAGTGACCCGCAAACTTGCACCAGCTCCTGCGTGGCCTCCTGCACCTCGGAATCCTTGTCGTCGGCCAAGGGGAACTCCGCAGCATCAGTGACCTCCATGAGCTGCCGCGAGCAGCGCTCAATCTGGTGGATCTCCTTGAGCAGGCCGCATGAGTGCTTGCGGTCCTTCTTCTTGGACTCGTCGAGGATGCGGTCGAAGAGTGTGATGAGGGGGCCAGCCCAGGGGAAGGTCCTGGGCA-CCGCTGTGAGGTGCGCCTGGAGGCCGC-GTCCTGGCATGGGATTGCTGCC-CGAGCGCCCAGGTGACGACGAACAGCACGGCGCCCATGGGGTAGACGGCGGAGGCGAGGCCTCCGGTGGCGGCGATGTCGTTCGCGCGGGGCACCGTGAGGCCTCCCC-CGATGGCCTGCAGCTGGCGCGCGGCGGACCATGTGCGGGAGACGATGCGGGAGAGTGACCTGAGATGGGAGCCAGAGCCGGACCCGGAGCTCCCGCCGCTGCTGCTCCGGCGGTGGTGGCCGTGGCCGTGGGGAAGGGAGTCCCGAGTAGTACCGGCGCGGCCGAAGGAGCGGTTGCGCTGTCCGACGACTCCCCCAGCGTCCTNGTCGTCGAGCATGAGGATGGTGAGATCGGTGAGGGCCTTGCGGGCGCGGCGGATCTGGGCCTCTCCTCGCTGCGCGGCGGGGGCGGGGGCGAGAGCGGCGGCGGCGATGGCGAGGTGCTTGCGCCACTGGCGGATGAGGTCGAGGCCGTCGCGGAGGGCGTTGCAGAGAT]

[+] EMBL CB661833             [AATTCTGTATTCTTTTTTCTTCCGATCATATACACATTTGTTGGAACATCAACAAACAAAATGTTGGGAATAGCAGTATATCAAAACCTCACAGCTCAATATCTGAGCTAACCTATCCGATTGTATAAATTACTCCCGCCCACGCCTTTTTACAATATAAACCTAATCCACAGACTAATCATGGAAACAAACCAACCAGAGTGCTCAACATTACCAGGACAAGCAATGAATGAAATAAATGATATTAGACCATTAGTACGAAGAACTGCTCAAGTAAGGATTCACAAGCTACAAAAGGAGAG AAAAAAAATGAAAGAAATAACTCAAATGTATCATAACTAAGGCCAGGCCTTCTTCATGCAGAGACATGTATATGTAGATGCTAACTTTTACAGAGAAGCTACCTCGGTGGAGCGGCTGCATTTCACACAAAGTTGGATCAAGCAATGAGTCCTCACCCGGCGTTGTGCGGCCTACTGAGGTAGTCGAGGATTTCTGTCCGGGTGCGCACAACCCTGTGGAACATCTCCCGCACCTGGCGCTCAAGAGGGTCCAGCCCATCCTTGAGTGACCCGCAAACTTGCACCAGCTCCTGCGTGGCCTCCTGCACCTCGGAATCCTTGTCGTCGGCCAAGGGGAACTCCGCAGCATCAGTGACCTCCATGAGCTGCCGCGAGCAGCGCTCAATCTGGTGGATCTCCTTGAGCAGGCCGCATGAGTGCTTGCGGTCCTTCTTCTTGGACTCGTCGAGGATGCGGTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB661835             [                                                                           nTATATCAAAACCTCTCCCCTCAATATCTGAGCTAACCTATCCGATTGTATAAATTACTCCCGCCCACGCCTTTTTACAATATAAACCTAATCCACAGACTAATCATGGAAACAAACCAACCAGAGTGCTCAACATTACCAGGACAAGCAATGAATGAAATAAATGATATTACACCATTAGTACGAAGAACTGCTCAAGTAAGGATTCACAAGCTACAAAAGGAGAG AAATAAAATGAAAGAAATAACTCAAATGTATCCTAACTAGGGgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CA752671             [                                                                                                                                                                                                                           gggttttTGAATGNGGTAAATGATATTAGACCATTAGTACGAAGAACTGCTCAAGTAAGGATTCACAAGCTACAAAAGGAGAGAAAAAAAAATGAAAGAAATAACTCAAATGTATCATAACTAAGGCCAGGCCTTCTTCATGCAGAGACATGTATATGTAGATGCTAACTTTTACAGAGAAGCTACCTCGGTGGAGCGGCTGCATTTCACACAAAGTTGGATCAAGCAATGAGTCCTCACCCGGCGTTGTGCGGCCTACTGAGGTAGTCGAGGATTTCTGTCCGGGTGCGCACAACCCTGTGGAACATCTCCCGCACCTGGCGCTCAAGAGGGTCCAGCCCATCCTTGAGTGACCCGCAAACTTGCACCAGCTCCTGCGTGGCCTCCTGCACCTCGGAATCCTTGTCGTCGGCCAAGGGGAACTCCGCAGCATCAGTGACCTCCATGAGCTGCCGCGAGCAGCGCTCAATCTGGTGGATCTCCTTGAGCAGGCCGCATGAGTGCTTGCGGTCCTTCTTCTTGGACTCGTCGAGGATGCGGTCGAAGAGTGTGATGAGGGGGCCAGCCCAAGGGAAGGTCCTGGGCACCCGTTGTGAGGTGCGCCTGGAGGCCGC GTCCTGGCATTGGATTGCTGCC CNAGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CA752713             [                                                                                                                                                                                                                           gggttttTGAATGAAATAAATGATATTAG GGATTAGTACGAAGAACTGCTCAAGTAAGGATTCACAAGCTACAAAAGGAGAGAAAAAAAAATGAAAGAAATAACTCAAATGTATCATAACTAAGGCCAGGCCTTCTTCATGCAGAGACATGTATATGTAGATGCTAACTTTTACAGAGAAGCTACCTCGGTGGAGCGGCTGCATTTCACACAAAGTTGGATCAAGCAATGAGTCCTCACCCGGCGTTGTGCGGCCTACTGAGGTAGTCGAGGATTTCTGTCCGGGTGCGCACAACCCTGTGGAACATCTCCCGCACCTGGCGCTCAAGAGGGTCCAGCCCATCCTTGAGTGACCCGCAAACTTGCACCAGCTCCTGCGTGGCCTCCTGCACCTCGGAATCCTTGTCGTCGGCCAAGGGGAACTCCGCAGCATCAGTGACCT CATGAGCTGCCGCGAGCAGCGCTCAATCTGGTGGATCT CTTGAGCA GCCGCATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB661834             [                                                                                                                                                                                                                                                                                                                                                                                   TATATGTAGATGCTAACTTTTACAGAGAAGCTACCTCGGTGGAGCGGCTGCATTTCACACAAAGTTGGATCAAGCAATGAGTCCTCACCGGGCGTTGTGCGGCCTACTGAGGTAGTCGAGGATTTCTGTCCGGGTGCGCACAACCCTGTGGAACATCTCCCGCGCCTGGCGCTCAAGAGGGTCCAGCCCATCCTTGAGTGACCCGCAAACTTGCACCAGCTCCTGCGTGGCCTCCTGCACCTCGGAATCCTTGTCGTCGGCCAAGGGGAACTCCGCAGCATCAGTGACCTCCATGAGCTGCCGTGAGCAGCGCTCAATCTGGTGGATCTCCTTGAGCAGTCCGCATGAGTGCTTGCGGTCCTTCTTCTTGGACTCGTCGAGGATGCGGTCGAAGAGTGTGATGAGGGGGCCAGCCCAGGGGAAGGTCCTGGGCA CCGCTGTGAGGTGCGCCTGGAGGCCGCGGTCCTGGCATGGGATTGCTGCCACGAGCGCCCAGGTGACGACGAACAGCACGGCGCCCATGGGGTAGACGGCGGAGGCGAGGCCTCCGGTGGCGGCGATGTCGTTCGCGCGGGGCACCGTGAGGCCTCCCC CGATGGCCTGCAGCTGGCGCGCGGCGGACCATGTGCGGGAGACGATGCGGGAGAG                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CA758405             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCTTCTTGGACTCGTCGAGGATGCGGTCGAAGAGTGTGATGAGGGGGCCAGCCCAGGGGAAGGTCCTGGGCA CCGCTGTGAGGTGCGCCTGGAGGCCGCGGTCCTGGCATGGGATTGCTGCCACGAGCGCCCAGGTGACGACGAACAGCACGGCGCCCATGGCGTAGACGGCGGAGGCGAGGCCTCCGGTGGCGGCGATGTCGTTCGCGCGGGGCACCGTGAGGCCTCCCCNCGATGGCCTGCAGCTGGCGCGCGGCGGACCATGTGCGGGAGACGCTCCAGGAGAGTGACCTGAGATGGGAGCCAGAGCCGGACCCGGAGCTCCCGCCGCTGCTGCTCCGGCGGTGGTGGCCGTGGCCGTGGGGAAGGGAGTCCCGAGTAGTACCGGCGCGGCCGAAGGAGCGGTTGCGCTGTCCGACGACTCCCCCAGCGTCCTNGTCGTCGAGCATGAGGATGGTGAGATCGGTGAGGGCCTTGCGGGCGCGGCGGATCTGGGCCTCTCCTCGCTGCGCGGCGGGGGCGGGGGCGAGAGCGGCGGCGGCGATGGCGAGGTGCTTGCGCCACTGGCGGATGAGGTCGAGGCCGTCGCGGAGGGCGTTGCAGAGAT]




>consensus_11281#0
AATTCTGTATTCTTTTTTCTTCCGATCATATACACATTTGTTGGAACATCAACAAACAAA
ATGTTGGGAATAGCAGTATATCAAAACCTCACAGCTCAATATCTGAGCTAACCTATCCGA
TTGTATAAATTACTCCCGCCCACGCCTTTTTACAATATAAACCTAATCCACAGACTAATC
ATGGAAACAAACCAACCAGAGTGCTCAACATTACCAGGACAAGCAATGAATGAAATAAAT
GATATTAGACCATTAGTACGAAGAACTGCTCAAGTAAGGATTCACAAGCTACAAAAGGAG
AGAAAAAAAATGAAAGAAATAACTCAAATGTATCATAACTAAGGCCAGGCCTTCTTCATG
CAGAGACATGTATATGTAGATGCTAACTTTTACAGAGAAGCTACCTCGGTGGAGCGGCTG
CATTTCACACAAAGTTGGATCAAGCAATGAGTCCTCACCCGGCGTTGTGCGGCCTACTGA
GGTAGTCGAGGATTTCTGTCCGGGTGCGCACAACCCTGTGGAACATCTCCCGCACCTGGC
GCTCAAGAGGGTCCAGCCCATCCTTGAGTGACCCGCAAACTTGCACCAGCTCCTGCGTGG
CCTCCTGCACCTCGGAATCCTTGTCGTCGGCCAAGGGGAACTCCGCAGCATCAGTGACCT
CCATGAGCTGCCGCGAGCAGCGCTCAATCTGGTGGATCTCCTTGAGCAGGCCGCATGAGT
GCTTGCGGTCCTTCTTCTTGGACTCGTCGAGGATGCGGTCGAAGAGTGTGATGAGGGGGC
CAGCCCAGGGGAAGGTCCTGGGCACCGCTGTGAGGTGCGCCTGGAGGCCGCGTCCTGGCA
TGGGATTGCTGCCCGAGCGCCCAGGTGACGACGAACAGCACGGCGCCCATGGGGTAGACG
GCGGAGGCGAGGCCTCCGGTGGCGGCGATGTCGTTCGCGCGGGGCACCGTGAGGCCTCCC
CCGATGGCCTGCAGCTGGCGCGCGGCGGACCATGTGCGGGAGACGATGCGGGAGAGTGAC
CTGAGATGGGAGCCAGAGCCGGACCCGGAGCTCCCGCCGCTGCTGCTCCGGCGGTGGTGG
CCGTGGCCGTGGGGAAGGGAGTCCCGAGTAGTACCGGCGCGGCCGAAGGAGCGGTTGCGC
TGTCCGACGACTCCCCCAGCGTCCTNGTCGTCGAGCATGAGGATGGTGAGATCGGTGAGG
GCCTTGCGGGCGCGGCGGATCTGGGCCTCTCCTCGCTGCGCGGCGGGGGCGGGGGCGAGA
GCGGCGGCGGCGATGGCGAGGTGCTTGCGCCACTGGCGGATGAGGTCGAGGCCGTCGCGG
AGGGCGTTGCAGAGAT

consensusID : consensus_11281#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 426
fasta sequence

                              [TTTTTTTTTTTTTTTGAATGAAATAAATGATATTAGACCATTAGTACGAAGAACTGCTCAAGTAAGGATTCACAAGCTACAAAAGGAGAGAAAAAAAATGAAAGAAATAACTCAAATGTATCATAACTAAGGCCAGGCCTTCTTCATGCAGAGACATGTATATGTAGATGCTAACTTTTACAGAGAAGCTACCTCGGTGGAGCGGCTGCATTTCACACAAAGTTGGATCAAGCAATGAGTCCTCACCCGGCGTTGTGCGGCCTACTGAGGTAGTCGAGGATTTCTGTCCGGGTGCGCACAACCCTGTGGAACATNTCCCGCACCTGGCGCTCAANAGGGTCCAGCCCATCCTTGAGTGACCCGCAAACTTGCACCAGCTCCTGCGTGGCCTCCTGCACCTCGGAATCCTTGTCGTCGGCCAAGGGG]

[-] EMBL AU092677             [TTTTTTTTTTTTTTTGAATGAAATAAATGATATTAGACCATTAGTACGAAGAACTGCTCAAGTAAGGATTCACAAGCTACAAAAGGAGAGAAAAAAAATGAAAGAAATAACTCAAATGTATCATAACTAAGGCCAGGCCTTCTTCATGCAGAGACATGTATATGTAGATGCTAACTTTTACAGAGAAGCTACCTCGGTGGAGCGGCTGCATTTCACACAAAGTTGGATCAAGCAATGAGTCCTCACCCGGCGTTGTGCGGCCTACTGAGGTAGTCGAGGATTTCTGTCCGGGTGCGCACAACCCTGTGGAACATNTCCCGCACCTGGCGCTCAANAGGGTCCAGCCCATCCTTGAGTGACCCGCAAACTTGCACCAGCTCCTGCGTGGCCTCCTGCACCTCGGAATCCTTGTCGTCGGCCAAGGGG]




>consensus_11281#1
TTTTTTTTTTTTTTTGAATGAAATAAATGATATTAGACCATTAGTACGAAGAACTGCTCA
AGTAAGGATTCACAAGCTACAAAAGGAGAGAAAAAAAATGAAAGAAATAACTCAAATGTA
TCATAACTAAGGCCAGGCCTTCTTCATGCAGAGACATGTATATGTAGATGCTAACTTTTA
CAGAGAAGCTACCTCGGTGGAGCGGCTGCATTTCACACAAAGTTGGATCAAGCAATGAGT
CCTCACCCGGCGTTGTGCGGCCTACTGAGGTAGTCGAGGATTTCTGTCCGGGTGCGCACA
ACCCTGTGGAACATNTCCCGCACCTGGCGCTCAANAGGGTCCAGCCCATCCTTGAGTGAC
CCGCAAACTTGCACCAGCTCCTGCGTGGCCTCCTGCACCTCGGAATCCTTGTCGTCGGCC
AAGGGG

consensusID : consensus_11281#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 270
fasta sequence

                              [GGGGCCAGCCCAGGGGAAGNTCCTGGGCACCGCTGTNAGGTNCGCCTGGAGGCCGCGGTCCTGGCATGGGATTGCTGCCACGAGCGCCCAGGTGACNACGAACAGCACGGCGCGGTCGAGGAAGTCGAGGAGGAGGCGGTCGAGCGGGGGGCGGGAGAGGGGCTGGGAGTCAGCGAGGGCGAAGAGGATAGCGCGGAACTCCTCGAGGCAGATGAGGAAGGAGTCGAGGAGGCGGCGCGTCCAAGCGAGGGAGAGGAGGTCCGGGGCGGA]

[-] EMBL C27778               [GGGGCCAGCCCAGGGGAAGNTCCTGGGCACCGCTGTNAGGTNCGCCTGGAGGCCGCGGTCCTGGCATGGGATTGCTGCCACGAGCGCCCAGGTGACNACGAACAGCACGGCGCGGTCGAGGAAGTCGAGGAGGAGGCGGTCGAGCGGGGGGCGGGAGAGGGGCTGGGAGTCAGCGAGGGCGAAGAGGATAGCGCGGAACTCCTCGAGGCAGATGAGGAAGGAGTCGAGGAGGCGGCGCGTCCAAGCGAGGGAGAGGAGGTCCGGGGCGGA]




>consensus_11281#2
GGGGCCAGCCCAGGGGAAGNTCCTGGGCACCGCTGTNAGGTNCGCCTGGAGGCCGCGGTC
CTGGCATGGGATTGCTGCCACGAGCGCCCAGGTGACNACGAACAGCACGGCGCGGTCGAG
GAAGTCGAGGAGGAGGCGGTCGAGCGGGGGGCGGGAGAGGGGCTGGGAGTCAGCGAGGGC
GAAGAGGATAGCGCGGAACTCCTCGAGGCAGATGAGGAAGGAGTCGAGGAGGCGGCGCGT
CCAAGCGAGGGAGAGGAGGTCCGGGGCGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11281#0      AATTCTGTATTCTTTTTTCTTCCGATCATATACACATTTGTTGGAACATCAACAAACAAA 60
consensus_11281#1      ------------------------------------------------------------
consensus_11281#2      ------------------------------------------------------------
                                                                                   

consensus_11281#0      ATGTTGGGAATAGCAGTATATCAAAACCTCACAGCTCAATATCTGAGCTAACCTATCCGA 120
consensus_11281#1      ------------------------------------------------------------
consensus_11281#2      ------------------------------------------------------------
                                                                                   

consensus_11281#0      TTGTATAAATTACTCCCGCCCACGCCTTTTTACAATATAAACCTAATCCACAGACTAATC 180
consensus_11281#1      ------------------------------------------------------------
consensus_11281#2      ------------------------------------------------------------
                                                                                   

consensus_11281#0      ATGGAAACAAACCAACCAGAGTGCTCAACATTACCAGGACAAGCAATGAATGAAATAAAT 240
consensus_11281#1      --------------------------------TTTTTTTTTTTTTTTGAATGAAATAAAT 28
consensus_11281#2      ------------------------------------------------------------
                                                                                   

consensus_11281#0      GATATTAGACCATTAGTACGAAGAACTGCTCAAGTAAGGATTCACAAGCTACAAAAGGAG 300
consensus_11281#1      GATATTAGACCATTAGTACGAAGAACTGCTCAAGTAAGGATTCACAAGCTACAAAAGGAG 88
consensus_11281#2      ------------------------------------------------------------
                                                                                   

consensus_11281#0      AGAAAAAAAATGAAAGAAATAACTCAAATGTATCATAACTAAGGCCAGGCCTTCTTCAT- 359
consensus_11281#1      AGAAAAAAAATGAAAGAAATAACTCAAATGTATCATAACTAAGGCCAGGCCTTCTTCAT- 147
consensus_11281#2      -----------------------------GGGGCCAGCCCAGGGGAAGNTCCTGGGCACC 31
                                                    *   *    * * **  **  * *   **  

consensus_11281#0      GCAGAGACATGTATATGTAGATGCTAACTTTTACAGAGAA--GCTACCTCGGTGGAGCGG 417
consensus_11281#1      GCAGAGACATGTATATGTAGATGCTAACTTTTACAGAGAA--GCTACCTCGGTGGAGCGG 205
consensus_11281#2      GCTGTNAGGTNCGCCTGGAGGCCGCGGTCCTGGCATGGGATTGCTGCCACGAGCGCCCAG 91
                       ** *  *  *     ** **          *  **  * *  *** ** **   *  * *

consensus_11281#0      CTGCATTTCACACAAAGTTGGATCAAGCAATGAGTCCTC-ACCCGGCG-TTGTGCGGCCT 475
consensus_11281#1      CTGCATTTCACACAAAGTTGGATCAAGCAATGAGTCCTC-ACCCGGCG-TTGTGCGGCCT 263
consensus_11281#2      GTG-ACNACGAACAGCACGGCGCGGTCGAGGAAGTCGAGGAGGAGGCGGTCGAGCGGGGG 150
                        ** *   *  ***     *        *   ****    *   **** * * ****   

consensus_11281#0      ACTGAGGTAGTCGAGGATTTCTGTCCGGGTGCGCACAACCCTGTGGAACATCTCCCGCAC 535
consensus_11281#1      ACTGAGGTAGTCGAGGATTTCTGTCCGGGTGCGCACAACCCTGTGGAACATNTCCCGCAC 323
consensus_11281#2      GCGGGAGAGGGGCTGGGAGTCAGCGAGGGCGAAGAGGATAGCGCGGAAC--TCCTCGAGG 208
                        * *  *  *    **   ** *   *** *   *  *    * *****    * **   

consensus_11281#0      CTGGCGCTCAAGAGGGTCCAGCCCATCCTTGAGTGACCCGCAAACTTGCACCAGCTCCTG 595
consensus_11281#1      CTGGCGCTCAANAGGGTCCAGCCCATCCTTGAGTGACCCGCAAACTTGCACCAGCTCCTG 383
consensus_11281#2      CAGATGAGGAAG-GAGTCGAGGAGG---CGGCGCGTCCAAGCGAGGGAGAGGAGGTCCGG 264
                       * *  *   **  * *** **         * * * **     *     *  ** *** *

consensus_11281#0      CGTGGCCTCCTGCACCTCGGAATCCTTGTCGTCGGCCAAGGGGAACTCCGCAGCATCAGT 655
consensus_11281#1      CGTGGCCTCCTGCACCTCGGAATCCTTGTCGTCGGCCAAGGGG----------------- 426
consensus_11281#2      GGCGGA------------------------------------------------------ 270
                        * **                                                       

consensus_11281#0      GACCTCCATGAGCTGCCGCGAGCAGCGCTCAATCTGGTGGATCTCCTTGAGCAGGCCGCA 715
consensus_11281#1      ------------------------------------------------------------
consensus_11281#2      ------------------------------------------------------------
                                                                                   

consensus_11281#0      TGAGTGCTTGCGGTCCTTCTTCTTGGACTCGTCGAGGATGCGGTCGAAGAGTGTGATGAG 775
consensus_11281#1      ------------------------------------------------------------
consensus_11281#2      ------------------------------------------------------------
                                                                                   

consensus_11281#0      GGGGCCAGCCCAGGGGAAGGTCCTGGGCACCGCTGTGAGGTGCGCCTGGAGGCCGCGTCC 835
consensus_11281#1      ------------------------------------------------------------
consensus_11281#2      ------------------------------------------------------------
                                                                                   

consensus_11281#0      TGGCATGGGATTGCTGCCCGAGCGCCCAGGTGACGACGAACAGCACGGCGCCCATGGGGT 895
consensus_11281#1      ------------------------------------------------------------
consensus_11281#2      ------------------------------------------------------------
                                                                                   

consensus_11281#0      AGACGGCGGAGGCGAGGCCTCCGGTGGCGGCGATGTCGTTCGCGCGGGGCACCGTGAGGC 955
consensus_11281#1      ------------------------------------------------------------
consensus_11281#2      ------------------------------------------------------------
                                                                                   

consensus_11281#0      CTCCCCCGATGGCCTGCAGCTGGCGCGCGGCGGACCATGTGCGGGAGACGATGCGGGAGA 1015
consensus_11281#1      ------------------------------------------------------------
consensus_11281#2      ------------------------------------------------------------
                                                                                   

consensus_11281#0      GTGACCTGAGATGGGAGCCAGAGCCGGACCCGGAGCTCCCGCCGCTGCTGCTCCGGCGGT 1075
consensus_11281#1      ------------------------------------------------------------
consensus_11281#2      ------------------------------------------------------------
                                                                                   

consensus_11281#0      GGTGGCCGTGGCCGTGGGGAAGGGAGTCCCGAGTAGTACCGGCGCGGCCGAAGGAGCGGT 1135
consensus_11281#1      ------------------------------------------------------------
consensus_11281#2      ------------------------------------------------------------
                                                                                   

consensus_11281#0      TGCGCTGTCCGACGACTCCCCCAGCGTCCTNGTCGTCGAGCATGAGGATGGTGAGATCGG 1195
consensus_11281#1      ------------------------------------------------------------
consensus_11281#2      ------------------------------------------------------------
                                                                                   

consensus_11281#0      TGAGGGCCTTGCGGGCGCGGCGGATCTGGGCCTCTCCTCGCTGCGCGGCGGGGGCGGGGG 1255
consensus_11281#1      ------------------------------------------------------------
consensus_11281#2      ------------------------------------------------------------
                                                                                   

consensus_11281#0      CGAGAGCGGCGGCGGCGATGGCGAGGTGCTTGCGCCACTGGCGGATGAGGTCGAGGCCGT 1315
consensus_11281#1      ------------------------------------------------------------
consensus_11281#2      ------------------------------------------------------------
                                                                                   

consensus_11281#0      CGCGGAGGGCGTTGCAGAGAT 1336
consensus_11281#1      ---------------------
consensus_11281#2      ---------------------