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Oryza sativa
cluster # 1129 cluster # 1129       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1129#0 length = 1748 sequences # 2  

consensusID : consensus_1129#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1748
fasta sequence
                              [AGTTCGGCCATCTCCACAATCCCCCACGCCCCGAGAAAACCCTAAACCCCCCAACCCTCGCCGCCGGCAACCGCCGCCGCCATGTTCGGCACCCCGGCTTCGTCGCCCCTATTTGGGACCCCCTCCACCACCCCGGCATTCGGCGCCCCTTCCTCCACCCCTGCATTCGGCACGCCCTCCACCAACCCCGCCTTCGGCACCCCTTCCTCCACGCCGGCGTTCGGCGCGCCGTCGTCCACCCCGTCCTTCGGCACCCCCTCCACCGCGCCCGCGTTCGGGACCCCGTCCTCGACCCCGGCGTTCGGCGCGCCCTCCTCGACCCCTGCCTTCGGGGCGCCCTTCTCGACCCCGGCGTTCGGCGTGGCGCCGTCGCCGTCGCCATCGCCGTTTGGGTTCCAGCAGCAGATGACGCCGTCCCCGTCGCCGTTCGGGTTCGCCGGTGGGGGCGGCGGGCAGATCACCACCCAGATGGCCCCCGTCGCGCCGCTCCCGCTCTCGCCCTCCGACCGTGACATCCAGGCTATCGTGGATGCGTACAAGGAGGATCCTGGAAACCCTCGTTATGCTTTCAGGCATCTGTTGTTTAGTGTTACAGAGCCTTCACAACGGGTGAAGCCAGTTGCGGCATCTGATATCATGTGGGCAGAAGCTATGGGGAAGCTTGAGGGCATGGATAGTTCGGATAGGGAGAGGCTGTGGCCTCAACTCGTGCAGGGATTTAAGGATCTTTCCTACCGGCTTAAGCTTCAAGATGGAGTTCTTGTCTCAGATTCTGATAGATTGAGCATGACACGCGACAATGTTAAAAAGTTGCAAAGACATTTCCAAGCTGACACATACCCATGGATCCAACGGCTGAAGCAGCAAGAGTTGGTTATTGAGAGACGCCTCTTAAGGATAACGAGAATAGTGGAGGCATTAGAGAATCGGGGTTATCGTATTCCACTAACGAAGGAGGAAGCTGATCTGTATGAACGACTGGCTGTTATAGCGAAGCAGCTAAAAGGACCCACTGGTGATCTGCACAGGAGAGTTTATAATCTTCTTTCAACTTCTCGCCTTCTTGCTAGTGCTGGTGGCACTGCTGGTCCTATCTATATTCCTAGCTCAGCGAAAGTTGACGAACAGAGTGTTGCTGAGCTTCTTGAGGCCTTACAACAACAGACGGAAGCTGTTGCCAAGTTGGGCAATGTGATGAAAAGAGATACAAGAGACTTGGAAATAATACTTTCGGAAGACACGGACATGGCAGAAGACAGTGTTGGGAGAAGGGCATTGAAGATGTATAACTAAACCAAATTCTTCATTCAATGCATTGACATAAGCAGGAGATCCTTCTTTGGTCAAGGGTTTAGAGTGTCGGAAAGATGGCAGCCAAACGAACGTTTGACCTTAAACGTCTACCGTTGCAAACGACTAAACGAGAATTTGTTCTGTTTGGAAGGGCCATAGTGGAATTGGCGGTTTGTGTTTTGGTGACGGCAAAAACAAGTCACCAGTGTGACAAAATCTGATGTTGGCTGTGGCAGTTGTGTAAACCACAGCCACCTGCTAAGCCCTCTTAAATTCGTGAGTTAGTCAGAGATCGATTGCCTGCATGTAACACTTGTATAATGACATTTTAGATTATTTAGATGAGCGTCTTTGCGGACTAGATCCGATATATTGTCGCAGATTGTTGTAGGTTTAAACGGAGCTTAGTTTGGTGATGTGCCCGGGAGGCTGCATGCAAGGTTTCAAAATGCGAA]

[+] EMBL AK073103             [AGTTCGGCCATCTCCACAATCCCCCACGCCCCGAGAAAACCCTAAACCCCCCAACCCTCGCCGCCGGCAACCGCCGCCGCCATGTTCGGCACCCCGGCTTCGTCGCCCCTATTTGGGACCCCCTCCACCACCCCGGCATTCGGCGCCCCTTCCTCCACCCCTGCATTCGGCACGCCCTCCACCAACCCCGCCTTCGGCACCCCTTCCTCCACGCCGGCGTTCGGCGCGCCGTCGTCCACCCCGTCCTTCGGCACCCCCTCCACCGCGCCCGCGTTCGGGACCCCGTCCTCGACCCCGGCGTTCGGCGCGCCCTCCTCGACCCCTGCCTTCGGGGCGCCCTTCTCGACCCCGGCGTTCGGCGTGGCGCCGTCGCCGTCGCCATCGCCGTTTGGGTTCCAGCAGCAGATGACGCCGTCCCCGTCGCCGTTCGGGTTCGCCGGTGGGGGCGGCGGGCAGATCACCACCCAGATGGCCCCCGTCGCGCCGCTCCCGCTCTCGCCCTCCGACCGTGACATCCAGGCTATCGTGGATGCGTACAAGGAGGATCCTGGAAACCCTCGTTATGCTTTCAGGCATCTGTTGTTTAGTGTTACAGAGCCTTCACAACGGGTGAAGCCAGTTGCGGCATCTGATATCATGTGGGCAGAAGCTATGGGGAAGCTTGAGGGCATGGATAGTTCGGATAGGGAGAGGCTGTGGCCTCAACTCGTGCAGGGATTTAAGGATCTTTCCTACCGGCTTAAGCTTCAAGATGGAGTTCTTGTCTCAGATTCTGATAGATTGAGCATGACACGCGACAATGTTAAAAAGTTGCAAAGACATTTCCAAGCTGACACATACCCATGGATCCAACGGCTGAAGCAGCAAGAGTTGGTTATTGAGAGACGCCTCTTAAGGATAACGAGAATAGTGGAGGCATTAGAGAATCGGGGTTATCGTATTCCACTAACGAAGGAGGAAGCTGATCTGTATGAACGACTGGCTGTTATAGCGAAGCAGCTAAAAGGACCCACTGGTGATCTGCACAGGAGAGTTTATAATCTTCTTTCAACTTCTCGCCTTCTTGCTAGTGCTGGTGGCACTGCTGGTCCTATCTATATTCCTAGCTCAGCGAAAGTTGACGAACAGAGTGTTGCTGAGCTTCTTGAGGCCTTACAACAACAGACGGAAGCTGTTGCCAAGTTGGGCAATGTGATGAAAAGAGATACAAGAGACTTGGAAATAATACTTTCGGAAGACACGGACATGGCAGAAGACAGTGTTGGGAGAAGGGCATTGAAGATGTATAACTAAACCAAATTCTTCATTCAATGCATTGACATAAGCAGGAGATCCTTCTTTGGTCAAGGGTTTAGAGTGTCGGAAAGATGGCAGCCAAACGAACGTTTGACCTTAAACGTCTACCGTTGCAAACGACTAAACGAGAATTTGTTCTGTTTGGAAGGGCCATAGTGGAATTGGCGGTTTGTGTTTTGGTGACGGCAAAAACAAGTCACCAGTGTGACAAAATCTGATGTTGGCTGTGGCAGTTGTGTAAACCACAGCCACCTGCTAAGCCCTCTTAAATTCGTGAGTTAGTCAGAGATCGATTGCCTGCATGTAACACTTGTATAATGACATTTTAGATTATTTAGATGAGCGTC                                                                                                         ]
[+] EMBL AK060569             [                                  GAAAACCCTAAACCCCCCAACCCTCGCCGCCGGCAACCGCCGCCGCCATGTTCGGCACCCCGGCTTCGTCGCCCCTATTTGGGACCCCCTCCACCACCCCGGCATTCGGCGCCCCTTCCTCCACCCCTGCATTCGGCACGCCCTCCACCAACCCCGCCTTCGGCACCCCTTCCTCCACGCCGGCGTTCGGCGCGCCGTCGTCCACCCCGTCCTTCGGCACCCCCTCCACCGCGCCCGCGTTCGGGACCCCGTCCTCGACCCCGGCGTTCGGCGCGCCCTCCTCGACCCCTGCCTTCGGGGCGCCCTTCTCGACCCCGGCGTTCGGCGTGGCGCCGTCGCCGTCGCCATCGCCGTTTGGGTTCCAGCAGCAGATGACGCCGTCCCCGTCGCCGTTCGGGTTCGCCGGTGGGGGCGGCGGGCAGATCACCACCCAGATGGCCCCCGTCGCGCCGCTCCCGCTCTCGCCCTCCGACCGTGACATCCAGGCTATCGTGGATGCGTACAAGGAGGATCCTGGAAACCCTCGTTATGCTTTCAGGCATCTGTTGTTTAGTGTTACAGAGCCTTCACAACGGGTGAAGCCAGTTGCGGCATCTGATATCATGTGGGCAGAAGCTATGGGGAAGCTTGAGGGCATGGATAGTTCGGATAGGGAGAGGCTGTGGCCTCAACTCGTGCAGGGATTTAAGGATCTTTCCTACCGGCTTAAGCTTCAAGATGGAGTTCTTGTCTCAGATTCTGATAGATTGAGCATGACACGCGACAATGTTAAAAAGTTGCAAAGACATTTCCAAGCTGACACATACCCATGGATCCAACGGCTGAAGCAGCAAGAGTTGGTTATTGAGAGACGCCTCTTAAGGATAATGAGAATAGTGGAGGCATTAGAGAATCGGGGTTATCGTATTCCACTAACGAAGGAGGAAGCTGATCTGTATGAACGACTGGCTGTTATAGCAAAGCAGCTAAAAGGACCCACTGGTGATCTGCACAGGAGAGTTTATAATCTTCTTTCAACTTCTCGCCTTCTTGCTAGTGCTGGTGGCACTGCTGGTCCTATCTATATTCCTAGCTCAGCGAAAGTTGACGAACAGAGTGTTGCTGAGCTTCTTGAGGCCTTACAACAACAGACGGAAGCTGTTGCCAAGTTGGGCAATGTGATGAAAAGAGATACAAGAGACTTGGAAATAATACTTTCGGAAGACACGGACATGGCAGAAGACAGTGTTGGGAGAAGGGCATTGAAGATGTATAACTAAACCAAATTCTTCATTCAATGCATTGACATAAGCAGGAGATCCTTCTTTGGTCAAGGGTTTAGAGTGTCGGAAAGATGGCAGCCAAACGAACGTTTGACCTTAAACGTCTACCGTTGCAAACGACTAAACGAGAATTTGTTCTGTTTGGAAGGGCCATAGTGGAATTGGCGGTTTGTGTTTTGGTGACGGCAAAAACAAGTCACCAGTGTGACAAAATCTGATGTTGGCTGTGGCAGTTGTGTAAACCACAGCCACCTGCTAAGCCCTCTTAAATTCGTGAGTTAGTCAGAGATCGATTGCCTGCATGTAACACTTGTATAATGACATTTTAGATTATTTAGATGAGCGTCTTTGCGGACTAGATCCGATATATTGTCGCAGATTGTTGTAGGTTTAAACGGAGCTTAGTTTGGTGATGTGCCCGGGAGGCTGCATGCAAGGTTTCAAAATGCGAA]


>consensus_1129#0 AGTTCGGCCATCTCCACAATCCCCCACGCCCCGAGAAAACCCTAAACCCCCCAACCCTCG CCGCCGGCAACCGCCGCCGCCATGTTCGGCACCCCGGCTTCGTCGCCCCTATTTGGGACC CCCTCCACCACCCCGGCATTCGGCGCCCCTTCCTCCACCCCTGCATTCGGCACGCCCTCC ACCAACCCCGCCTTCGGCACCCCTTCCTCCACGCCGGCGTTCGGCGCGCCGTCGTCCACC CCGTCCTTCGGCACCCCCTCCACCGCGCCCGCGTTCGGGACCCCGTCCTCGACCCCGGCG TTCGGCGCGCCCTCCTCGACCCCTGCCTTCGGGGCGCCCTTCTCGACCCCGGCGTTCGGC GTGGCGCCGTCGCCGTCGCCATCGCCGTTTGGGTTCCAGCAGCAGATGACGCCGTCCCCG TCGCCGTTCGGGTTCGCCGGTGGGGGCGGCGGGCAGATCACCACCCAGATGGCCCCCGTC GCGCCGCTCCCGCTCTCGCCCTCCGACCGTGACATCCAGGCTATCGTGGATGCGTACAAG GAGGATCCTGGAAACCCTCGTTATGCTTTCAGGCATCTGTTGTTTAGTGTTACAGAGCCT TCACAACGGGTGAAGCCAGTTGCGGCATCTGATATCATGTGGGCAGAAGCTATGGGGAAG CTTGAGGGCATGGATAGTTCGGATAGGGAGAGGCTGTGGCCTCAACTCGTGCAGGGATTT AAGGATCTTTCCTACCGGCTTAAGCTTCAAGATGGAGTTCTTGTCTCAGATTCTGATAGA TTGAGCATGACACGCGACAATGTTAAAAAGTTGCAAAGACATTTCCAAGCTGACACATAC CCATGGATCCAACGGCTGAAGCAGCAAGAGTTGGTTATTGAGAGACGCCTCTTAAGGATA ACGAGAATAGTGGAGGCATTAGAGAATCGGGGTTATCGTATTCCACTAACGAAGGAGGAA GCTGATCTGTATGAACGACTGGCTGTTATAGCGAAGCAGCTAAAAGGACCCACTGGTGAT CTGCACAGGAGAGTTTATAATCTTCTTTCAACTTCTCGCCTTCTTGCTAGTGCTGGTGGC ACTGCTGGTCCTATCTATATTCCTAGCTCAGCGAAAGTTGACGAACAGAGTGTTGCTGAG CTTCTTGAGGCCTTACAACAACAGACGGAAGCTGTTGCCAAGTTGGGCAATGTGATGAAA AGAGATACAAGAGACTTGGAAATAATACTTTCGGAAGACACGGACATGGCAGAAGACAGT GTTGGGAGAAGGGCATTGAAGATGTATAACTAAACCAAATTCTTCATTCAATGCATTGAC ATAAGCAGGAGATCCTTCTTTGGTCAAGGGTTTAGAGTGTCGGAAAGATGGCAGCCAAAC GAACGTTTGACCTTAAACGTCTACCGTTGCAAACGACTAAACGAGAATTTGTTCTGTTTG GAAGGGCCATAGTGGAATTGGCGGTTTGTGTTTTGGTGACGGCAAAAACAAGTCACCAGT GTGACAAAATCTGATGTTGGCTGTGGCAGTTGTGTAAACCACAGCCACCTGCTAAGCCCT CTTAAATTCGTGAGTTAGTCAGAGATCGATTGCCTGCATGTAACACTTGTATAATGACAT TTTAGATTATTTAGATGAGCGTCTTTGCGGACTAGATCCGATATATTGTCGCAGATTGTT GTAGGTTTAAACGGAGCTTAGTTTGGTGATGTGCCCGGGAGGCTGCATGCAAGGTTTCAA AATGCGAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)