cluster # 11290

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Oryza sativa
cluster # 11290 cluster # 11290 Sequences # 7 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11290#0 length = 1393 sequences # 5

consensus_11290#1 length = 785 sequences # 1
consensus_11290#2 length = 337 sequences # 1

consensusID : consensus_11290#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1393
fasta sequence

                              [GCGCCGGCCCGGCGCAATTCGGCCTCCCTGACGCCGGCGCGGCCGGCGCATCGAAGGAGATGGAGCTCGGGAACACCCGGGACGAGTCGTCGGTGTCTGATCCGGCGCCCGGCGGCGCCGAGATTCCGCCCAAGGGGGCTTCCGACGGCAATGCACGGAAGCGGAAGGCCTCCGGGAAGGGCAAAGGCAAGGACAGCCCCATGTCCACCTCCGCCGCCAAGGAGGATTCCAGCGGCAAGCGTTGCAAATCGACGGAGGAGAGCAATGCGGCCGCCGAGGAGAATTCCGGCAAGGGGAAGGCCGCGCAGAGCAACAGCGAGAATGGCGGCGGCAAGAAGCAAGGGAAGGACAGCTCGTCGAAGCCCCCCGAGCCGCCCAAGGACTACATCCATGTCCGCGCCCGGCGCGGCGAGGCGACGGACAGCCACAGCCTCGCCGAGAGGGTGAGAAGAGAGAAGATAAGCCAGAGGATGAAGCTGCTGCAGGATCTCGTGCCGGGTTGTAACAAGGTGGTTGGAAAGGC-TGTCA-TGCTCGATGAAATCA-TAAACTATGTGCAGTCGTTGCAACGGCAAGTCGAGTTTTTGTCCATGAAGTTGGCCACTGTGAATCCCCAGCTGGACTTCAACAATTTGCCTAACCTCCTTGCTAAAGATATGCACCAGTCATGCAGCCCGTTACAGAGCTCACATTTTCCACTAGAGACCTCAGGTGCGCCGCTGCCCTACATTAACCAGCCTCAGCAAGGGAACCCTCTCGGTTGTGGCCTGACGAACGGCATGGACAACCAGGGTTCTATGCACCCATTGGACCCGGCATTTTGCCGGCCAATGGGCTCGCACCATCCTTTCCTCAATGGGGTTAGCGATGCGGCTTCTCAGGTTGGTGCTTTCTGGCAAGATGATCTCCAAAGTGTTGTTCAGATGGATATGGGGCAAAGTCAGGAGATCGCCACCTCTTCCAATAGCTACAATGGATCGTTGCAAACAG-TCCACATG-AAAATGGAGCTTTGACATGACCAAATAAAGGTTCGA-TCCAAAGCTC-TGACG-CCCATTGTACATACAGAGAAGTCAGC-TTGCCGC-GGCAGCACTC-TGAGATTCAACCCT-AACAATGTTGGGCCCTAGC-AGTGTTTTA-GCTTCTAA--TTTCCCATCTTGGTGTAATGATTCTTTGAACAAAAATGAAACGCACCATGTACGGTAGTCGGGTGTAGTATATATATGTATGCTACAAGATCGTACATAAGTCGGGTGCAGTATATGATGCTTCATTCAGACCCTTTTACCCTCTCAAGCAGAGAGGGACGACGTGTAATATCATTATTTGTATTCTCATTATATTTGTAGCTGATATATATCTTTAAGATCCTTAAACCTGTCAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK101063             [GCGCCGGCCCGGCGCAATTCGGCCTCCCTGACGCCGGCGCGGCCGGCGCATCGAAGGAGATGGAGCTCGGGAACACCCGGGACGAGTCGTCGGTGTCTGATCCGGCGCCCGGCGGCGCCGAGATTCCGCCCAAGGGGGCTTCCGACGGCAATGCACGGAAGCGGAAGGCCTCCGGGAAGGGCAAAGGCAAGGACAGCCCCATGTCCACCTCCGCCGCCAAGGAGGATTCCAGCGGCAAGCGTTGCAAATCGACGGAGGAGAGCAATGCGGCCGCCGAGGAGAATTCCGGCAAGGGGAAGGCCGCGCAGAGCAACAGCGAGAATGGCGGCGGCAAGAAGCAAGGGAAGGACAGCTCGTCGAAGCCCCCCGAGCCGCCCAAGGACTACATCCATGTCCGCGCCCGGCGCGGCGAGGCGACGGACAGCCACAGCCTCGCCGAGAGGGTGAGAAGAGAGAAGATAAGCCAGAGGATGAAGCTGCTGCAGGATCTCGTGCCGGGTTGTAACAAGGTGGTTGGAAAGGC TGTCA TGCTCGATGAAATCA TAAACTATGTGCAGTCGTTGCAACGGCAAGTCGAGTTTTTGTCCATGAAGTTGGCCACTGTGAATCCCCAGCTGGACTTCAACAATTTGCCTAACCTCCTTGCTAAAGATATGCACCAGTCATGCAGCCCGTTACAGAGCTCACATTTTCCACTAGAGACCTCAGGTGCGCCGCTGCCCTACATTAACCAGCCTCAGCAAGGGAACCCTCTCGGTTGTGGCCTGACGAACGGCATGGACAACCAGGGTTCTATGCACCCATTGGACCCGGCATTTTGCCGGCCAATGGGCTCGCACCATCCTTTCCTCAATGGGGTTAGCGATGCGGCTTCTCAGGTTGGTGCTTTCTGGCAAGATGATCTCCAAAGTGTTGTTCAGATGGATATGGGGCAAAGTCAGGAGATCGCCACCTCTTCCAATAGCTACAATGGATCGTTGCAAACAG TCCACATG AAAATGGAGCTTTGACATGACCAAATAAAGGTTCGA TCCAAAGCTC TGACG CCCATTGTACATACAGAGAAGTCAGC TTGCCGC GGCAGCACTC TGAGATTCAACCCT AACAATGTTGGGCCCTAGC AGTGTTTTA GCTTCTAA  TTTCCCATCTTGGTGTAATGATTCTTTGAACAAAAATGAAACGCACCATGTACGGTAGTCGGGTGTAGTATATATATGTATGCTACAAGATCGTACATAAGTCGGGTGCAGTATATGATGCTTCATTCAGACCCTTTTACCCTCTCAAGCAGAGAGGGACGACGTGTAATATCATTATTTGTATTCTCATTATATTTGTAGCTGATATATATCTTTAAGATCCTT                             ]
[+] EMBL AU069872             [                                                                                                                                                                                                                                                                                           TTCCGGCAAGGGGAAGGCCGCGCAGAGCAACAGCGAGAATGGCGGCGGCAAGAAGCAAGGGAAGGACAGCTCGTCGAAGCCCCCCGAGCCGCCCAAGGACTACATCCATGTCCGCGCCCGGCGC GCGAGGCGACGGACAGCCACAGCCTCGCCGAGAGGGTGAGAAGAGAGAAGATAAGCCAGAGGATGAAGCTGCTGCAGGATCTCGTGCCGGGTTGTAACAAGGTGGTTGGAAAGGC TGTCA TGCTCGATGAAATCA TAAACTATGTGCAGTCGTTGCAACGGCAAGTCGAGTTTTTGTCCATGAAGTTGGCCACTGTGAATCCCCAGCTGGACTTCAACAATTTGCCTAACCTCCTTGCTAAAGATATGCACCAGTCATGCAGCCCGTTACAGAGCTCACATTTTCCACTAGAGACCTCAGGTGCGCCGCTGCCCTACATTAACCAGCCTCAGCAAGGGAACCCTCTCGGTTGTGGCCTGACGAACGGCATGGACAACCAGGGTTCTATGCACCCATTGGACCCGGCATTTTGCCGGCCAATGGGCTCGCACCATCCTTTCCTCAATGGGGTTAGCGATGCGGCTTCTCAGGTTGGTGCTTTCTGGCAAGATGATCTCCAAAGTGTTGTTCAGATGGATATGGGGCAAAGTCAGGAGATCGCCANCTCTTCCAATAGCTACAATGGATCGTTGCAAACAGTTCCACATGAAAAATGGAGCTTTGACATGACCAAATAAAGGTTCGATTCCAAAGCTCTTGACGNCCCATTGTACATACAGAGAAATCAGCNTTGCCGCGGGCAACACTCTTGAGATTCAACCCTAAAAAATTTTGGG CCTAACAAATGTTTTANCCTTCTAAANTTNCCCAac                                                                                                                                                                                                                                                     ]
[+] EMBL AA753795             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGGCTTGTCATTGCTCGATGAAATCAGTAAACTATGTGCAGTCGTTGCAACGGCAAGTCGAGTTTTTTTCCATGAAGTTGGCCACTGTGAATCCCCAGCTGGACTTCAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU183337             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGATCGCCACCTCTTCCAATAGCTACAATGGATCGTTGCAAACAG TCCACATG AAAATGGAGCTTTGACATGACCAAATAAAGGTTCGA TCCAAAGCTC TGACG CCCATTGTACATACAGAGAAGTCAGC TTGCCGC GGCAGCACTC TGAGATTCAACCCT AACAATGTTGGGCCCTAGC AGTGTTTTA GCTTCTAA  TTTCCCATCTTGGTGTAATGATTCTTTGAACAAAAATGAAACGCACCATGTACGGTAGTCGGGTGTAGTATATATATGTATGCTACAAGATCGTACATAAGTCGGGTGCAGTATATGATGCTTCATTCAGACCCTTTTACCCTCTCAAGCAGAGAGGGACGACGTGTAATATCATTATTTGTATTCTCATTATATTTGTAGCTGATATATATCTTTAAGATCaaaaaa                          ]
[+] EMBL CA757892             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGTATATATATGTATGCTACAAGATCGTACATAAGTCGGGTGCAGTATATGATGCTTCATTCAGACCCTTTTACCCTCTCAAGCAGAGAGGGACGACGTGTAATATCATTATTTGTATTCTCATTATATTTGTAGCTGATATATATCTTTAAGATCCTTCTTCCTGTCAAAAAAAAAAAAAAAAAAAA]




>consensus_11290#0
GCGCCGGCCCGGCGCAATTCGGCCTCCCTGACGCCGGCGCGGCCGGCGCATCGAAGGAGA
TGGAGCTCGGGAACACCCGGGACGAGTCGTCGGTGTCTGATCCGGCGCCCGGCGGCGCCG
AGATTCCGCCCAAGGGGGCTTCCGACGGCAATGCACGGAAGCGGAAGGCCTCCGGGAAGG
GCAAAGGCAAGGACAGCCCCATGTCCACCTCCGCCGCCAAGGAGGATTCCAGCGGCAAGC
GTTGCAAATCGACGGAGGAGAGCAATGCGGCCGCCGAGGAGAATTCCGGCAAGGGGAAGG
CCGCGCAGAGCAACAGCGAGAATGGCGGCGGCAAGAAGCAAGGGAAGGACAGCTCGTCGA
AGCCCCCCGAGCCGCCCAAGGACTACATCCATGTCCGCGCCCGGCGCGGCGAGGCGACGG
ACAGCCACAGCCTCGCCGAGAGGGTGAGAAGAGAGAAGATAAGCCAGAGGATGAAGCTGC
TGCAGGATCTCGTGCCGGGTTGTAACAAGGTGGTTGGAAAGGCTGTCATGCTCGATGAAA
TCATAAACTATGTGCAGTCGTTGCAACGGCAAGTCGAGTTTTTGTCCATGAAGTTGGCCA
CTGTGAATCCCCAGCTGGACTTCAACAATTTGCCTAACCTCCTTGCTAAAGATATGCACC
AGTCATGCAGCCCGTTACAGAGCTCACATTTTCCACTAGAGACCTCAGGTGCGCCGCTGC
CCTACATTAACCAGCCTCAGCAAGGGAACCCTCTCGGTTGTGGCCTGACGAACGGCATGG
ACAACCAGGGTTCTATGCACCCATTGGACCCGGCATTTTGCCGGCCAATGGGCTCGCACC
ATCCTTTCCTCAATGGGGTTAGCGATGCGGCTTCTCAGGTTGGTGCTTTCTGGCAAGATG
ATCTCCAAAGTGTTGTTCAGATGGATATGGGGCAAAGTCAGGAGATCGCCACCTCTTCCA
ATAGCTACAATGGATCGTTGCAAACAGTCCACATGAAAATGGAGCTTTGACATGACCAAA
TAAAGGTTCGATCCAAAGCTCTGACGCCCATTGTACATACAGAGAAGTCAGCTTGCCGCG
GCAGCACTCTGAGATTCAACCCTAACAATGTTGGGCCCTAGCAGTGTTTTAGCTTCTAAT
TTCCCATCTTGGTGTAATGATTCTTTGAACAAAAATGAAACGCACCATGTACGGTAGTCG
GGTGTAGTATATATATGTATGCTACAAGATCGTACATAAGTCGGGTGCAGTATATGATGC
TTCATTCAGACCCTTTTACCCTCTCAAGCAGAGAGGGACGACGTGTAATATCATTATTTG
TATTCTCATTATATTTGTAGCTGATATATATCTTTAAGATCCTTAAACCTGTCAAAAAAA
AAAAAAAAAAAAA

consensusID : consensus_11290#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 785
fasta sequence

                              [AGACAAGGGGGAAGTTGGCCCTGTGAATCCCCAGCTGGACTTCAACANTTTGCCTAACCTCCTTGCTAAAGATATGCACCAGTCATGCNGCCCGTTACAGAGCTCACATTTTCCACTANAGACCTNAGGTGCGCCGCTGCCCTACATTAACCAGCCTNAGCAAGGGAACCCTCTCGGTTGTGGCCTGACGAACGGNATGGACAACCAGGGTTCTATGCACCCATTGGACCCGGCATTTTGCCGGCCAATGGGCTCGCACCATCCTTTCCTCAATGGGGTTAGCGATGCGGCTTCTCAGGTTGGTGCTTTCTGGCAAGATGATCTCCAAAGTGTTGTTCAGATGGATATGGGGCAAAGTCAGGAGATCGCCACCTCTTCCAATANCTACAATGGATCGTTGCAAACAGNCCACATGAAAATGGAGCTTTGACATGACCAAATAAAGGTTCGATCCAAAGCTCTGACGCCCATTGTACATACAGAGAAGNCAGCTTGCCGCGGCAGCACTCTGAGATTCAACCCTAACAATGTTGGGCCCTAGCAGTGTTTTAGCTTCTAATTNCCCATCTTGGTGTAATGATTCTTTGAACAAAAATGAAAACGCACCATGTACGGTAGTCGNGTGTAGTATATATATGGATGCTACAAGGATCGTACNTAACTCGGNTGCAGTATATGATGCTTCATTCAGACCCTTTTACCTTNTAAGCAGGAGAGGGACGACGGGGAAAAACATTAATTGGAATTCNNATTATATTTGGAGCTGANATANANCTTTAAAACCC]

[+] EMBL CA764937             [AGACAAGGGGGAAGTTGGCCCTGTGAATCCCCAGCTGGACTTCAACANTTTGCCTAACCTCCTTGCTAAAGATATGCACCAGTCATGCNGCCCGTTACAGAGCTCACATTTTCCACTANAGACCTNAGGTGCGCCGCTGCCCTACATTAACCAGCCTNAGCAAGGGAACCCTCTCGGTTGTGGCCTGACGAACGGNATGGACAACCAGGGTTCTATGCACCCATTGGACCCGGCATTTTGCCGGCCAATGGGCTCGCACCATCCTTTCCTCAATGGGGTTAGCGATGCGGCTTCTCAGGTTGGTGCTTTCTGGCAAGATGATCTCCAAAGTGTTGTTCAGATGGATATGGGGCAAAGTCAGGAGATCGCCACCTCTTCCAATANCTACAATGGATCGTTGCAAACAGNCCACATGAAAATGGAGCTTTGACATGACCAAATAAAGGTTCGATCCAAAGCTCTGACGCCCATTGTACATACAGAGAAGNCAGCTTGCCGCGGCAGCACTCTGAGATTCAACCCTAACAATGTTGGGCCCTAGCAGTGTTTTAGCTTCTAATTNCCCATCTTGGTGTAATGATTCTTTGAACAAAAATGAAAACGCACCATGTACGGTAGTCGNGTGTAGTATATATATGGATGCTACAAGGATCGTACNTAACTCGGNTGCAGTATATGATGCTTCATTCAGACCCTTTTACCTTNTAAGCAGGAGAGGGACGACGGGGAAAAACATTAATTGGAATTCNNATTATATTTGGAGCTGANATANANCTTTAAAACCC]




>consensus_11290#1
AGACAAGGGGGAAGTTGGCCCTGTGAATCCCCAGCTGGACTTCAACANTTTGCCTAACCT
CCTTGCTAAAGATATGCACCAGTCATGCNGCCCGTTACAGAGCTCACATTTTCCACTANA
GACCTNAGGTGCGCCGCTGCCCTACATTAACCAGCCTNAGCAAGGGAACCCTCTCGGTTG
TGGCCTGACGAACGGNATGGACAACCAGGGTTCTATGCACCCATTGGACCCGGCATTTTG
CCGGCCAATGGGCTCGCACCATCCTTTCCTCAATGGGGTTAGCGATGCGGCTTCTCAGGT
TGGTGCTTTCTGGCAAGATGATCTCCAAAGTGTTGTTCAGATGGATATGGGGCAAAGTCA
GGAGATCGCCACCTCTTCCAATANCTACAATGGATCGTTGCAAACAGNCCACATGAAAAT
GGAGCTTTGACATGACCAAATAAAGGTTCGATCCAAAGCTCTGACGCCCATTGTACATAC
AGAGAAGNCAGCTTGCCGCGGCAGCACTCTGAGATTCAACCCTAACAATGTTGGGCCCTA
GCAGTGTTTTAGCTTCTAATTNCCCATCTTGGTGTAATGATTCTTTGAACAAAAATGAAA
ACGCACCATGTACGGTAGTCGNGTGTAGTATATATATGGATGCTACAAGGATCGTACNTA
ACTCGGNTGCAGTATATGATGCTTCATTCAGACCCTTTTACCTTNTAAGCAGGAGAGGGA
CGACGGGGAAAAACATTAATTGGAATTCNNATTATATTTGGAGCTGANATANANCTTTAA
AACCC

consensusID : consensus_11290#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 337
fasta sequence

                              [GGCCCTAGCAGTGTTTTAGCTTCTAATTTCCCATCTTGGTGTAATGATTCTTTGAANAAAAATGAAACGCNCCATGTACGGTAGTCGGGTGTAGTATATATATGTATGCTACAAGATCGTACATAAGTCGGGTGCAGTATATGATGCTTCATTCAGACCNTTTTACCCTTTCAAGCAGAGAGGGACGACGTGTAATATCATTATTTGTATTCTCATTATATTTGTAGCTGATATATATCTTTAAGATCCTTCTTCCTGTCCATGGATCGATCTCCTTAAGCTGAAATTATCCCCTTTTTTTCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU101327             [GGCCCTAGCAGTGTTTTAGCTTCTAATTTCCCATCTTGGTGTAATGATTCTTTGAANAAAAATGAAACGCNCCATGTACGGTAGTCGGGTGTAGTATATATATGTATGCTACAAGATCGTACATAAGTCGGGTGCAGTATATGATGCTTCATTCAGACCNTTTTACCCTTTCAAGCAGAGAGGGACGACGTGTAATATCATTATTTGTATTCTCATTATATTTGTAGCTGATATATATCTTTAAGATCCTTCTTCCTGTCCATGGATCGATCTCCTTAAGCTGAAATTATCCCCTTTTTTTCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_11290#2
GGCCCTAGCAGTGTTTTAGCTTCTAATTTCCCATCTTGGTGTAATGATTCTTTGAANAAA
AATGAAACGCNCCATGTACGGTAGTCGGGTGTAGTATATATATGTATGCTACAAGATCGT
ACATAAGTCGGGTGCAGTATATGATGCTTCATTCAGACCNTTTTACCCTTTCAAGCAGAG
AGGGACGACGTGTAATATCATTATTTGTATTCTCATTATATTTGTAGCTGATATATATCT
TTAAGATCCTTCTTCCTGTCCATGGATCGATCTCCTTAAGCTGAAATTATCCCCTTTTTT
TCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11290#0      GCGCCGGCCCGGCGCAATTCGGCCTCCCTGACGCCGGCGCGGCCGGCGCATCGAAGGAGA 60
consensus_11290#1      ------------------------------------------------------------
consensus_11290#2      ------------------------------------------------------------
                                                                                   

consensus_11290#0      TGGAGCTCGGGAACACCCGGGACGAGTCGTCGGTGTCTGATCCGGCGCCCGGCGGCGCCG 120
consensus_11290#1      ------------------------------------------------------------
consensus_11290#2      ------------------------------------------------------------
                                                                                   

consensus_11290#0      AGATTCCGCCCAAGGGGGCTTCCGACGGCAATGCACGGAAGCGGAAGGCCTCCGGGAAGG 180
consensus_11290#1      ------------------------------------------------------------
consensus_11290#2      ------------------------------------------------------------
                                                                                   

consensus_11290#0      GCAAAGGCAAGGACAGCCCCATGTCCACCTCCGCCGCCAAGGAGGATTCCAGCGGCAAGC 240
consensus_11290#1      ------------------------------------------------------------
consensus_11290#2      ------------------------------------------------------------
                                                                                   

consensus_11290#0      GTTGCAAATCGACGGAGGAGAGCAATGCGGCCGCCGAGGAGAATTCCGGCAAGGGGAAGG 300
consensus_11290#1      ------------------------------------------------------------
consensus_11290#2      ------------------------------------------------------------
                                                                                   

consensus_11290#0      CCGCGCAGAGCAACAGCGAGAATGGCGGCGGCAAGAAGCAAGGGAAGGACAGCTCGTCGA 360
consensus_11290#1      ------------------------------------------------------------
consensus_11290#2      ------------------------------------------------------------
                                                                                   

consensus_11290#0      AGCCCCCCGAGCCGCCCAAGGACTACATCCATGTCCGCGCCCGGCGCGGCGAGGCGACGG 420
consensus_11290#1      ------------------------------------------------------------
consensus_11290#2      ------------------------------------------------------------
                                                                                   

consensus_11290#0      ACAGCCACAGCCTCGCCGAGAGGGTGAGAAGAGAGAAGATAAGCCAGAGGATGAAGCTGC 480
consensus_11290#1      ------------------------------------------------------------
consensus_11290#2      ------------------------------------------------------------
                                                                                   

consensus_11290#0      TGCAGGATCTCGTGCCGGGTTGTAACAAGGTGGTTGGAAAGGCTGTCATGCTCGATGAAA 540
consensus_11290#1      ------------------------------------------------------------
consensus_11290#2      ------------------------------------------------------------
                                                                                   

consensus_11290#0      TCATAAACTATGTGCAGTCGTTGCAACGGCAAGTCGAGTTTTTGTCCATGAAGTTGGCCA 600
consensus_11290#1      -------------------------------AGACAAGG--------GGGAAGTTGGCC- 20
consensus_11290#2      ------------------------------------------------------------
                                                                                   

consensus_11290#0      CTGTGAATCCCCAGCTGGACTTCAACAATTTGCCTAACCTCCTTGCTAAAGATATGCACC 660
consensus_11290#1      CTGTGAATCCCCAGCTGGACTTCAACANTTTGCCTAACCTCCTTGCTAAAGATATGCACC 80
consensus_11290#2      ------------------------------------------------------------
                                                                                   

consensus_11290#0      AGTCATGCAGCCCGTTACAGAGCTCACATTTTCCACTAGAGACCTCAGGTGCGCCGCTGC 720
consensus_11290#1      AGTCATGCNGCCCGTTACAGAGCTCACATTTTCCACTANAGACCTNAGGTGCGCCGCTGC 140
consensus_11290#2      ------------------------------------------------------------
                                                                                   

consensus_11290#0      CCTACATTAACCAGCCTCAGCAAGGGAACCCTCTCGGTTGTGGCCTGACGAACGGCATGG 780
consensus_11290#1      CCTACATTAACCAGCCTNAGCAAGGGAACCCTCTCGGTTGTGGCCTGACGAACGGNATGG 200
consensus_11290#2      ------------------------------------------------------------
                                                                                   

consensus_11290#0      ACAACCAGGGTTCTATGCACCCATTGGACCCGGCATTTTGCCGGCCAATGGGCTCGCACC 840
consensus_11290#1      ACAACCAGGGTTCTATGCACCCATTGGACCCGGCATTTTGCCGGCCAATGGGCTCGCACC 260
consensus_11290#2      ------------------------------------------------------------
                                                                                   

consensus_11290#0      ATCCTTTCCTCAATGGGGTTAGCGATGCGGCTTCTCAGGTTGGTGCTTTCTGGCAAGATG 900
consensus_11290#1      ATCCTTTCCTCAATGGGGTTAGCGATGCGGCTTCTCAGGTTGGTGCTTTCTGGCAAGATG 320
consensus_11290#2      ------------------------------------------------------------
                                                                                   

consensus_11290#0      ATCTCCAAAGTGTTGTTCAGATGGATATGGGGCAAAGTCAGGAGATCGCCACCTCTTCCA 960
consensus_11290#1      ATCTCCAAAGTGTTGTTCAGATGGATATGGGGCAAAGTCAGGAGATCGCCACCTCTTCCA 380
consensus_11290#2      ------------------------------------------------------------
                                                                                   

consensus_11290#0      ATAGCTACAATGGATCGTTGCAAACAGTCCACATGAAAATGGAGCTTTGACATGACCAAA 1020
consensus_11290#1      ATANCTACAATGGATCGTTGCAAACAGNCCACATGAAAATGGAGCTTTGACATGACCAAA 440
consensus_11290#2      ------------------------------------------------------------
                                                                                   

consensus_11290#0      TAAAGGTTCGATCCAAAGCTCTGACGCCCATTGTACATACAGAGAAGTCAGCTTGCCGCG 1080
consensus_11290#1      TAAAGGTTCGATCCAAAGCTCTGACGCCCATTGTACATACAGAGAAGNCAGCTTGCCGCG 500
consensus_11290#2      ------------------------------------------------------------
                                                                                   

consensus_11290#0      GCAGCACTCTGAGATTCAACCCTAACAATGTTGGGCCCTAGCAGTGTTTTAGCTTCTAAT 1140
consensus_11290#1      GCAGCACTCTGAGATTCAACCCTAACAATGTTGGGCCCTAGCAGTGTTTTAGCTTCTAAT 560
consensus_11290#2      ---------------------------------GGCCCTAGCAGTGTTTTAGCTTCTAAT 27
                                                        ***************************

consensus_11290#0      TTCCCATCTTGGTGTAATGATTCTTTGAACAAAAATGAAA-CGCACCATGTACGGTAGTC 1199
consensus_11290#1      TNCCCATCTTGGTGTAATGATTCTTTGAACAAAAATGAAAACGCACCATGTACGGTAGTC 620
consensus_11290#2      TTCCCATCTTGGTGTAATGATTCTTTGAANAAAAATGAAA-CGCNCCATGTACGGTAGTC 86
                       * *************************** ********** *** ***************

consensus_11290#0      GGGTGTAGTATATATATGTATGCTACAAG-ATCGTACATAAGTCGGGTGCAGTATATGAT 1258
consensus_11290#1      GNGTGTAGTATATATATGGATGCTACAAGGATCGTACNTAACTCGGNTGCAGTATATGAT 680
consensus_11290#2      GGGTGTAGTATATATATGTATGCTACAAG-ATCGTACATAAGTCGGGTGCAGTATATGAT 145
                       * **************** ********** ******* *** **** *************

consensus_11290#0      GCTTCATTCAGACCCTTTTACCCTCTCAAGCAGAGAGGGACGACGTGTAATATCATTATT 1318
consensus_11290#1      GCTTCATTCAGACCCTTTTACCTTNTAAGCAGGAGAGGGACGACGGGGAAAAACATTAAT 740
consensus_11290#2      GCTTCATTCAGACCNTTTTACCCTTTCAAGCAGAGAGGGACGACGTGTAATATCATTATT 205
                       ************** ******* * * *    ************* * ** * ***** *

consensus_11290#0      TGTA-TTCTCATTATATTTGTAGCTGATATATATCTTTAAGATCCTTAAACCTGTCAAAA 1377
consensus_11290#1      TGGAATTCNNATTATATTTGGAGCTGANATANANCTTTAAAACCC--------------- 785
consensus_11290#2      TGTA-TTCTCATTATATTTGTAGCTGATATATATCTTTAAGATCCTTCTTCCTGTCCATG 264
                       ** * ***  ********** ****** *** * ****** * **               

consensus_11290#0      AAAAAAAAAAAAAAAA-------------------------------------------- 1393
consensus_11290#1      ------------------------------------------------------------
consensus_11290#2      GATCGATCTCCTTAAGCTGAAATTATCCCCTTTTTTTCCCCAAAAAAAAAAAAAAAAAAA 324
                                                                                   

consensus_11290#0      -------------
consensus_11290#1      -------------
consensus_11290#2      AAAAAAAAAAAAA 337