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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11305#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2549 fasta sequence
[ACTACTCCGCGAGGCACCTCTCTCTCTCTCTCTGTGAGTTTCGTGCGATCTCGCGAGCGAATCCGGCGCGCGACCCAGGCTCTCCAAGATCCCCGCGCTCTCCTCTTCGGTTTACTGATCTGAAATCTCTGCGTCGAATCACCTGTTTGTTGGCTTGAATTGCTTGTCCGCGTCGTTGATTTCGTTGTGGTTTCTTGATCTTCGGTGGAATTTCTTTGCGTTGGATTGTCTCCACCCCTGTTGG-TTCTTGTCGATTCCCGATTTGAGTTGTTCGTTGGCGTGAAAAGGATTCTTTTTTTCCCCTGAGATTTCTTGATTTTTGGTGAAATTTCTTTGGTGTTGAAATATCATCGCCTTTTGGTTTCTTATCGATTCCGTCGTTCCGATTGGAGTTGTTCGTCGGCGTGAATTTTTTTTTCCTGATTCATCGTTGCTTGTTGATTGGGGATCGAATTTTTCGTCTACGATCCATCTTATTCGTGGTAGCAGTATCTCTTCTTGTTGCTGCGCTGTGCCCTGTTTATTTGTTTCTGCTTGTTGCTTCTGACCCATGGATGCAGGTTCGCACTCGATCTCATCGGAGAAGAGCAGCCGGTACGTGGCGCCGCGACAGCCACTCCAGGAGGCCGGATCCAGACCGTACATGCCATCGCTGAGCACGGCGTCCCGCAACCCGTCAGCCAAGTGCTACGGTGACAGGTTTATTCCGGACAGGTCGGCGATGGACATGGACATGGCGCACTACCTGCTGACGGAGCCGAGGAAGGACAAGGAGAACGCGGCGGCGTCCCCGGCCAAGGAGGCGTACCGGAAGCTGCTGGCCGAGAAGATCCTCAACAACCGCACCAGGATTCTCTCCTTCCGCAACAAGCCGCCAGAGCCCGAGAGCATCCTCACGGAGCTCCGTGCTGATGCGGCTTCCATCCAAGCCAAGCCGGCGAAGCAGCGCCGATACATTCCTCAGTCTGCCGAGAGGACTCTGGATGCTCCAGAGCTTGTTGATGATTACTACCTCAACCTACTGGACTGGGGAAGCAGCAATGTGCTATCCATTGCGCTGGGCAACTCGGTGTACCTCTGGGATGCCACGAACAGTTCAACTTCTGAGCTTGTTACCGTCGATGAGGACAATGGCCCTGTCACCAGCGTAAGCTGGGCTCCTGATGGCCGGCACATCGCCGTTGGTCTCAACTCCTCCGATGTCCAGCTCTGGGACACCAGCTCAAACCGACTGCTGAGGACGATGCGAGGCGTGCACGATTCGAGGGTCGGTTCGCTGGCATGGAACAACAACATCCTCACAACTGGTGGAATGGATGGCAAGATTGTGAACAATGATGTGAGGATCAGGAACCATGTTGTGCAGACATACCAGGGGCATCAGCAGGAGGTGTGTGGCCTCAAGTGGTCAGGATCAGGGCAGCAGCTTGCCAGTGGTGGCAATGACAACCTCCTGCACATATGGGATGTGTCCATGGCATCCTCTATGCCGTCTGCTGGCCGCACCCAGTGGTTACACAGGCTTGAGGATCACTTGGCTGCTGTGAAGGCTCTCGCGTGGTGCCCATTCCAGAGCAACCTGCTGGCATCTGGTGGTGGTGGGAGTGACCGGTGCATCAAGTTCTGGAACACACATACCGGCGCATGCCTCAACTCGATCGACACTGGGTCACAAGTGTGCTCGCTGGTCTGGAACAAGAATGAGAGAGAGCTGCTAAGCTCACATGGATTCGCTCAGAATCAGCTCACTTTGTGGAAGTACCCGTCAATGGTTAAGATGGCTGAACTCACTGGCCATACCTCTCGTGTCCTTTTCACGGCTCAGGTTATCTTTTGCTCCTTGTACCTGCCGTTTAAATTGACAAATATTGCTCTGAACAGATTGCTGATTACTTGTCTTGTGGTAATCTTGCAGAGCCCTGATGGTCTCACAGTAGCATCTGCTGCAGCAGATGAGACCCTGAGATTCTGGAACGTATTTGGGGCTCCTGAAGCACCCAAGACTGCAACCAAGGGTTCCCACACTGGGATGTTCAACAATTCCAACCACATTCACATCCGTTGAGGAACACAGTAAGTACTACCTTCATCTGTATTTCCCTAGCGCTTCTACACATTACACAGTATCAATGTGATGTCCAAAAGCTGCATGCATATCTATTAACTACAAGTAGCTCATTGTGCTGTTTTGCTCTATGCATCTTTGCAGATACCCTTGGTTCTGTGATCCAGTCATAACTTACAAAGAAGCAGACTTGGTGTGAAGGGTCATTTGCAGGAGAGATCATCTTACATTATTAGCAGAAGAGTTAGATTTTGACATGTTGTATATAAGGTTTTGTGCTATGTTGATAACAATTTTATGTACATCAAGACCGGTTTGATGTATTGATTGGCGTAGAAAAAATGTAAAAAAATTGCTTTTCTGCCAGTAATATACATTTTTATATACTTGCCAGGCTTTTCTTGTAGTAAGTTCCTCTCGTTGTGTAGTAACTTGTAATTTGATTGATTTTACTCTCGAGCCAATTGAGATGTCTGGTAACCAG]
[+] EMBL AK103675 [ACTACTCCGCGAGGCACCTCTCTCTCTCTCTCTGTGAGTTTCGTGCGATCTCGCGAGCGAATCCGGCGCGCGACCCAGGCTCTCCAAGATCCCCGCGCTCTCCTCTTCGGTTTACTGATCTGAAATCTCTGCGTCGAATCACCTGTTTGTTGGCTTGAATTGCTTGTCCGCGTCGTTGATTTCGTTGTGGTTTCTTGATCTTCGGTGGAATTTCTTTGCGTTGGATTGTCTCCACCCCTGTTGG TTCTTGTCGATTCCCGATTTGAGTTGTTCGTTGGCGTGAAAAGGATTCTTTTTTTCCCCTGAGATTTCTTGATTTTTGGTGAAATTTCTTTGGTGTTGAAATATCATCGCCTTTTGGTTTCTTATCGATTCCGTCGTTCCGATTGGAGTTGTTCGTCGGCGTGAATTTTTTTTTCCTGATTCATCGTTGCTTGTTGATTGGGGATCGAATTTTTCGTCTACGATCCATCTTATTCGTGGTAGCAGTATCTCTTCTTGTTGCTGCGCTGTGCCCTGTTTATTTGTTTCTGCTTGTTGCTTCTGACCCATGGATGCAGGTTCGCACTCGATCTCATCGGAGAAGAGCAGCCGGTACGTGGCGCCGCGACAGCCACTCCAGGAGGCCGGATCCAGACCGTACATGCCATCGCTGAGCACGGCGTCCCGCAACCCGTCAGCCAAGTGCTACGGTGACAGGTTTATTCCGGACAGGTCGGCGATGGACATGGACATGGCGCACTACCTGCTGACGGAGCCGAGGAAGGACAAGGAGAACGCGGCGGCGTCCCCGGCCAAGGAGGCGTACCGGAAGCTGCTGGCCGAGAAGATCCTCAACAACCGCACCAGGATTCTCTCCTTCCGCAACAAGCCGCCAGAGCCCGAGAGCATCCTCACGGAGCTCCGTGCTGATGCGGCTTCCATCCAAGCCAAGCCGGCGAAGCAGCGCCGATACATTCCTCAGTCTGCCGAGAGGACTCTGGATGCTCCAGAGCTTGTTGATGATTACTACCTCAACCTACTGGACTGGGGAAGCAGCAATGTGCTATCCATTGCGCTGGGCAACTCGGTGTACCTCTGGGATGCCACGAACAGTTCAACTTCTGAGCTTGTTACCGTCGATGAGGACAATGGCCCTGTCACCAGCGTAAGCTGGGCTCCTGATGGCCGGCACATCGCCGTTGGTCTCAACTCCTCCGATGTCCAGCTCTGGGACACCAGCTCAAACCGACTGCTGAGGACGATGCGAGGCGTGCACGATTCGAGGGTCGGTTCGCTGGCATGGAACAACAACATCCTCACAACTGGTGGAATGGATGGCAAGATTGTGAACAATGATGTGAGGATCAGGAACCATGTTGTGCAGACATACCAGGGGCATCAGCAGGAGGTGTGTGGCCTCAAGTGGTCAGGATCAGGGCAGCAGCTTGCCAGTGGTGGCAATGACAACCTCCTGCACATATGGGATGTGTCCATGGCATCCTCTATGCCGTCTGCTGGCCGCACCCAGTGGTTACACAGGCTTGAGGATCACTTGGCTGCTGTGAAGGCTCTCGCGTGGTGCCCATTCCAGAGCAACCTGCTGGCATCTGGTGGTGGTGGGAGTGACCGGTGCATCAAGTTCTGGAACACACATACCGGCGCATGCCTCAACTCGATCGACACTGGGTCACAAGTGTGCTCGCTGGTCTGGAACAAGAATGAGAGAGAGCTGCTAAGCTCACATGGATTCGCTCAGAATCAGCTCACTTTGTGGAAGTACCCGTCAATGGTTAAGATGGCTGAACTCACTGGCCATACCTCTCGTGTCCTTTTCACGGCTCAGGTTATCTTTTGCTCCTTGTACCTGCCGTTTAAATTGACAAATATTGCTCTGAACAGATTGCTGATTACTTGTCTTGTGGTAATCTTGCAGAGCCCTGATGGTCTCACAGTAGCATCTGCTGCAGCAGATGAGACCCTGAGATTCTGGAACGTATTTGGGGCTCCTGAAGCACCCAAGACTGCAACCAAGGGTTCCCACACTGGGATGTTCAACAATTCCAACCACATTCACATCCGTTGAGGAACACAGTAAGTACTACCTTCATCTGTATTTCCCTAGCGCTTCTACACATTACACAGTATCAATGTGATGTCCAAAAGCTGCATGCATATCTATTAACTACAAGTAGCTCATTGTGCTGTTTTGCTCTATGCATCTTTGCAGATACCCTTGGTTCTGTGATCCAGTCATAACTTACAAAGAAGCAGACTTGGTGTGAAGGGTCATTTGCAGGAGAGATCATCTTACATTATTAGCAGAAGAGTTAGATTTTGACATGTTGTATATAAGGTTTTGTGCTATGTTGATAACAATTTTATGTACATCAAGACCGGTTTGATGTATTGATTGGCGTAGAAAAAATGTAAAAAAATTGCTTTTCTGCCAGTAATATACATTTTTATATACTTGCCAGGCTTTTCTTGTAGTAAGTTCCTCTCGTTGTGTAGTAACTTGTAATTTGATTGATTTTACTCTCGAGCCAATTGAGATGTCTGGTAACCAG]
[+] EMBL CB674191 [ ACCTGTTTGTTGGCTTGAATTGCTTGTCCGCGTCGTTGATTTCGTTGTGGTTTCTTGATCTTCGGTGGAATTTCTTTGCGTTGGATTGTCTCCACCCCTGTTGGTTTCTTGTCGATTCCCGATTTGAGTTGTTCGTTGGCGTGAAAAGGATTCTTTTTTTCCCCTGAGATTTCTTGATTTTTGGTGAAATTTCTTTGGTGTTGAAATATCATCGCCTTTTGGTTTCTTATCGATTCCGTCGTTCCGATTGGAGTTGTTCGTCGGCGTGAATTTTTTTTTCCTGATTCATCGTTGCTTGTTGATTGGGGATCGAATTTTTCGTCTACGATCCATCTTATTCGTGGTAGCAGTATCTCTTCTTGTTGCTGCGCTGTGCCCTGTTTATTTGTTTCTGCTTGTTGCTTCTGACCCATGGATGCAGGTTCGCACTCGATCTCATCGGAGAAGAGCAGCCGGTACGTGGCGCCGCGACAGCCACTCCAGGAGGCCGGATCCAGACCGTACATGCCATCGCTGAGCACGGCGTCCCGCAACCCGTCAGCCAAGTGCTACGGTGACAGGTTTATTCCGGACAGGTCGGCGATGGACATGGACATGGCGCACTACCTGCTGACGGAGCCGAGGAAGGACAAGGAGAACGCGGCGGCGTCCCCGGCCAAGGAGGCGTACCGGAAGCTGCTGGCCGAGAAGATCCTCAACAACCGCACCAGGATTCTCTCCTTCCGCAACAAGCCGCCAGAGCCCGAGAGCATCCTCACGGAGCTCCGTG ]
consensusID : consensus_11305#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2520 fasta sequence
[AGCATCGCATCTCTCTTCTTCTCCCCCCCTCCTCGCCGCCTCTCCCCTCTCGTCGATCCGACGCGCTTGGGGGAGTCGACGCTTTCTCTTCTCGCTTGCTAATCAAAGCTCTCGCATAATTCCCGTCTCTGTTTCGTTAATTTCCGCTTGTTTCATTTAATTACATAGTCTTCTTAGCGTGTTGATTTTTCTGTTTGATCCTGTGATTGATCTAGTTTACTTCTAGTGATCTTTATTGCTGCTGGTATTACTGCTGTTTGTTTCCTTGTTATTTGCGTGCTTGTGCTCTTCTGTTTCTGCTAACCATGGACGCAGGCTCCCACTCGATCTCGTCGGAGAAGAGCCACGGACTCGCGCCGCGGCCGCCGCTCCAGGAGGCCGGCTCCCGCCCGTACATGCCATCGCTGAGCACTGCCTCGCGCAACCCGTCGGCCAAGTGCTACGGGGATAGGTTCATACCGGACAGGTCGGCGATGGACATGGACATGGCGCACTACCTGCTCACGGAGCCCAAGAAGGACAAGGAGAACGCGGCGGCGTCCCCGTCCAAGGAGGTGTACCGGAGGCTGCTCGCCGAGAAGCTGCTCAACAACCGGACACGGATCCTCGCCTTCCGGAACAAGCCACCGGAGCCCGAGAACGTCTCTGCCGCGGATACTGCTTCTACCCACCAGGCCAAGCCGGCCAAGCAGCGGCGCTACATTCCCCAGTCTGCCGAGAGGACTCTGGATGCACCGGACCTCGTCGACGATTACTATCTCAACCTGCTGGACTGGGGAAGCAAGAACGTGCTGTCCATTGCGCTGGGCGACACGGTGTACCTGTGGGACGCCTCGAGCGGATCCACATCTGAGCTCGTGACCGTGGACGAGGACAGCGGCCCGATCACCAGCGTCAGCTGGGCTCCTGACGGCCAGCATGTCGCCGTTGGCCTCAACTCTTCCGACATCCAGCTCTGGGACACCAGCTCCAACCGACTGCTTAGAACTCTGAGAGGTGTGCACGAATCAAGAGTCGGTTCACTCGCATGGAACAACAACATCCTGACCACTGGCGGTATGGACGGCAACATCGTGAACAATGACGTAAGAATCAGGAACCATGTCGTGCAGACATACCAGGGGCACAGCCAGGAGGTGTGCGGGCTCAAGTGGTCTGGTTCAGGGCAGCAGCTGGCCAGTGGTGGCAACGACAACCTTCTTCACATTTGGGATGTGTCCATGGCATCGTCCGTCCCATCTGCAGGCCGCAACCAGTGGCTGCACAGGCTCGAGGATCACACGGCCGCTGTGAAAGCGCTTGCATGGTGCCCATTCCAGAGCAACCTGCTTGCAACTGGAGGTGGTGGTAGCGACCGGTGCATCAAGTTCTGGAACACACACACCGGTGCATGCTTGAACTCTGTCGATACCGGATCGCAGGTGTGCGCTCTTCTATGGAACAAAAATGAGAGAGAGCTTCTGAGTTCACACGGATTCACGCAGAACCAGCTGACATTGTGGAAGTACCCGTCGATGGTTAAGATGGCTGAACTCACTGGCCATACTTCCCGTGTCCTTTTCATGGCTCAGAGTCCTGATGGTTGCACAGTAGCATCGGCTGCTGCAGATGAGACCCTGCGGTTCTGGAATGTGTTTGGTAGTCCTGAAGCCCCCAAGCCTGCAGCCAAGGCTTCCCACACTGGGATGTTCAACAGCTTCAACCATCTCAGATAAGGATGAACCAGGTGAACAAATTCGTCTATTTGATCTGGTCCTTTGGACAGCTTAAAAATGATCGTGCTGATTGAGATGGCCTTGGCACAATAGGCTGTGCAAGAAGAGCATTGCAGTGCTTCTCATGATAATGATCCAATCGTTTCGCTTTCAAACGGAAGATCGCAAGTGAGATTTGGCTTCATCGATATCTTCATCTTTGATTGGTAGATACTATCTTCGACTTCAAGTTCACAAAGAGCACCAAAAAGAACCTGGAAATGTGCAAAACCTTATCACTTATCGGGGAATGAAATGCTGAGTTGGTGACTTGAGATAGGAATATATACTTCTGGCAATTTAGTTAGTTATTCTGTACATTATCTAAAAAAAAGTTAGTTCTTCTGTAGAGCATATGTAAAGCACACACATAGTATCTAAAAAAATTGATCTTGTTTTAATTGCGCCAAAAGATCAATTTTTGAAGAATCTTTTGGTGGAAACATCAAATGATCGGTTTGATGTAACAAAACAAGAGGTGTAGTTCAAATATTTATGTACGTTCTTCCTCCGTTTCCTATCATACTATTCAAAACTAGTCGTTTGACCTTTTTTAGTCAAATTTTATCTAGTTTGATCAATTTTTCAATACAAAACAAACATATTTGTAGTAGTAGTATTTTTTGTTAGTTCATCCAGAGTACGGACACATTTGACCAAGGTTCTAACTTCTCTTGACAGATAGTAGCACTTGCAATTTTTGGTCATCTGAAGCAGTAGTAAGGCTGAGGTGCCGTAGTAGGGGATACCAAAATTGGAAATTTGA]
[+] EMBL AK102954 [AGCATCGCATCTCTCTTCTTCTCCCCCCCTCCTCGCCGCCTCTCCCCTCTCGTCGATCCGACGCGCTTGGGGGAGTCGACGCTTTCTCTTCTCGCTTGCTAATCAAAGCTCTCGCATAATTCCCGTCTCTGTTTCGTTAATTTCCGCTTGTTTCATTTAATTACATAGTCTTCTTAGCGTGTTGATTTTTCTGTTTGATCCTGTGATTGATCTAGTTTACTTCTAGTGATCTTTATTGCTGCTGGTATTACTGCTGTTTGTTTCCTTGTTATTTGCGTGCTTGTGCTCTTCTGTTTCTGCTAACCATGGACGCAGGCTCCCACTCGATCTCGTCGGAGAAGAGCCACGGACTCGCGCCGCGGCCGCCGCTCCAGGAGGCCGGCTCCCGCCCGTACATGCCATCGCTGAGCACTGCCTCGCGCAACCCGTCGGCCAAGTGCTACGGGGATAGGTTCATACCGGACAGGTCGGCGATGGACATGGACATGGCGCACTACCTGCTCACGGAGCCCAAGAAGGACAAGGAGAACGCGGCGGCGTCCCCGTCCAAGGAGGTGTACCGGAGGCTGCTCGCCGAGAAGCTGCTCAACAACCGGACACGGATCCTCGCCTTCCGGAACAAGCCACCGGAGCCCGAGAACGTCTCTGCCGCGGATACTGCTTCTACCCACCAGGCCAAGCCGGCCAAGCAGCGGCGCTACATTCCCCAGTCTGCCGAGAGGACTCTGGATGCACCGGACCTCGTCGACGATTACTATCTCAACCTGCTGGACTGGGGAAGCAAGAACGTGCTGTCCATTGCGCTGGGCGACACGGTGTACCTGTGGGACGCCTCGAGCGGATCCACATCTGAGCTCGTGACCGTGGACGAGGACAGCGGCCCGATCACCAGCGTCAGCTGGGCTCCTGACGGCCAGCATGTCGCCGTTGGCCTCAACTCTTCCGACATCCAGCTCTGGGACACCAGCTCCAACCGACTGCTTAGAACTCTGAGAGGTGTGCACGAATCAAGAGTCGGTTCACTCGCATGGAACAACAACATCCTGACCACTGGCGGTATGGACGGCAACATCGTGAACAATGACGTAAGAATCAGGAACCATGTCGTGCAGACATACCAGGGGCACAGCCAGGAGGTGTGCGGGCTCAAGTGGTCTGGTTCAGGGCAGCAGCTGGCCAGTGGTGGCAACGACAACCTTCTTCACATTTGGGATGTGTCCATGGCATCGTCCGTCCCATCTGCAGGCCGCAACCAGTGGCTGCACAGGCTCGAGGATCACACGGCCGCTGTGAAAGCGCTTGCATGGTGCCCATTCCAGAGCAACCTGCTTGCAACTGGAGGTGGTGGTAGCGACCGGTGCATCAAGTTCTGGAACACACACACCGGTGCATGCTTGAACTCTGTCGATACCGGATCGCAGGTGTGCGCTCTTCTATGGAACAAAAATGAGAGAGAGCTTCTGAGTTCACACGGATTCACGCAGAACCAGCTGACATTGTGGAAGTACCCGTCGATGGTTAAGATGGCTGAACTCACTGGCCATACTTCCCGTGTCCTTTTCATGGCTCAGAGTCCTGATGGTTGCACAGTAGCATCGGCTGCTGCAGATGAGACCCTGCGGTTCTGGAATGTGTTTGGTAGTCCTGAAGCCCCCAAGCCTGCAGCCAAGGCTTCCCACACTGGGATGTTCAACAGCTTCAACCATCTCAGATAAGGATGAACCAGGTGAACAAATTCGTCTATTTGATCTGGTCCTTTGGACAGCTTAAAAATGATCGTGCTGATTGAGATGGCCTTGGCACAATAGGCTGTGCAAGAAGAGCATTGCAGTGCTTCTCATGATAATGATCCAATCGTTTCGCTTTCAAACGGAAGATCGCAAGTGAGATTTGGCTTCATCGATATCTTCATCTTTGATTGGTAGATACTATCTTCGACTTCAAGTTCACAAAGAGCACCAAAAAGAACCTGGAAATGTGCAAAACCTTATCACTTATCGGGGAATGAAATGCTGAGTTGGTGACTTGAGATAGGAATATATACTTCTGGCAATTTAGTTAGTTATTCTGTACATTATCTAAAAAAAAGTTAGTTCTTCTGTAGAGCATATGTAAAGCACACACATAGTATCTAAAAAAATTGATCTTGTTTTAATTGCGCCAAAAGATCAATTTTTGAAGAATCTTTTGGTGGAAACATCAAATGATCGGTTTGATGTAACAAAACAAGAGGTGTAGTTCAA ]
[+] EMBL CF322625 [ ggcaCGAGGCGGTGTACCTGTGGGACGCCTCGAGCGGATCCACATCTGAGCTCGTGACCGTGGACGAGGACAGCGGCCCGATCACCAGCGTCAGCTGGGCTCCTGACGGCCAGCATGTCGCCGTTGGCCTCAACTCTTCCGACATCCAGCTCTGGGACACCAGCTCCAACCGACTGCTTAGAACTCTGAGAGGTGTGCACGAATCAAGAGTCGGTTCACTCGCATGGAACAACAACATCCTGACCACTGGCGGTATGGACGGCAACATCGTGAACAATGACGTAAGAATCAGGAACCATGTCGTGCAGACATACCAGGGGCACAGCCAGGAGGTGTGCGGGCTCAAGTGGTCTGGTTCAGGGCAGCAGCTGGCCAGTGGTGGCAACGACAACCTTCTTCACATTTGGGATGTGTCCATGGCATCGTCCGTCCCATCTGCAGGCCGCAACCAGTGGCTGCACAGGCTCGAGGATCACACGGCCGCTGTGAAAGCGCTTGCATGGTGCCCATTCCAGAGCAACCTG ]
[+] EMBL CA757653 [ AGATCGCGAGTGAGATTTGGCTTCATCGATATCTTCATCTTTGATTGGTAGATACTATCTTCGACTTCAAGTTCACAAAGAGCACCAAAAAGAACCTGGAAATGTGCAAAACCTTATCACTTATCGGGGAATGAAATGCTGAGTTGGTGACTTGAGATAGGAATATATACTTCTGGCAATTTAGTTAGTTATTCTGTACATTATCTAAAAAAAAGTTAGTTATTCTGTAGAGCATATGTAAAGCACACACATAGTATCTAAAAAAATTGATCTTGTTTTAATTGCGCCAAAAGATCAATTTTTGAAGAATCTTTTGGTGGAAACATCAAATGATCGGTTTGATGTAACAAAACAAGAGGTGTAGTTCAAATATTTATGTACGTTCTTCCTCCGTTTCCTATCATACTATTCAAAACTAGTCGTTTGACCTTTTTTAGTCAAATTTTATCTAGTTTGATCAATTTTTCAATACAAAACAAACATATTTGTAGTAGTAGTATTTTTTGTTAGTTCATCCAGAGTACGGACACATTTGACCAAGGTTCTAACTTCTCTTGACAGATAGTAGCACTTGCAATTTTTGGTCATCTGAAGCAGTAGTAAGGCTGAGGTGCCGTAGTAGGGGATACCAAAATTGGAAATTTGA]
[+] EMBL AU030834 [ cgAAGAACCTGGAAATGTGCAAAACCTTATCACTTATCGGGGAATGAAATGCTGAGTTGGTGACTTGAGATAGGAATATATACTTCTGGCAATTTAGTTAGTTATTCTGTACATTATCTAAAAAAAAGTTAGTTCTTCTGTAGAGCATATGTAAAGCACACACATAGTATCTAAAAAAATTGACCTTGTTTTAATTGCGCCAAAAGATCAATTTTTGAAGAATCTTTTGGTGGAAACATCAAATGATCGGTTTGATGTAACAAAACAAGAGGTGTAGTTCAAATATTTATGTACGTTCTTCCTCCGTTTCATATCATACTATTCAAAACTAaaaa ]
consensusID : consensus_11305#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 964 fasta sequence
[TGGTCTCAACTCCTCCGATGTCCAGCTCTGGGACACCAGCTCAAACCGACTGCTGAGGACGATGCGAGGCGTGCACGATTCGAGGGTCGGTTCGCTGGCATGGAACAACAACATCCTCACAACTGGTGGAATGGATGGCAAGATTGTGAACAATGATGTGAGGATCAGGAACCATGTTGTGCAGACATACCAGGGGCATCAGCAGGAGGTGTGTGGCCTCAAGTGGTCAGGATCAGGGCAGCAGCTTGCCAGTGGTGGCAATGACAACCTCCTGCACATATGGGATGTGTCCATGGCATCCTCTATGCCGTCTGCTGGCCGCACCCAGTGGTTACACAGGCTTGAGGATCACTTGGCTGCTGTGAAGGCTCTCGCGTGGTGCCCATTCCAGAGCAACCTGCTGGCATCTGGTGGTGGTGGGAGTGACCGGTGCATCAAGTTCTGGAACACACATACCGGCGCATGCCTCAACTCGATCGACACTGGGTCACAAGTGTGCTCGCTGGTCTGGAACAAGAATGAGAGAGAGCTGCTAAGCTCACATGGATTCGCTCAGAATCAGCTCACTTTGTGGAAGTACCCGTCAATGGTTAAAAGGGCTGAACTCACTGGCCATACCTCTCGGGTCCTTTTTACGGGTCAAAAGCCTGAAGGTCTCACAGAAGCATCTGTTTCAGCAAATGAGACCCTTAAATTCTGAAACTTATTGGGGCTTCTGATCACCAAGATTGAAACAAGGTTCCACCTAGGAAGTTAACAATTCACCCATTTACATTCGTGAGAAAAAATCCCTTGGTTGTGACCAGTTTATGTAAAAGAAAATTGGGGGAAGGGACTTCAGAAAAATTCCCACCTTTCCCGAGATCAATATCACATCTACTCAAGATTTGCTTCAATAACTTTTTACATAACCGTAATATTTTGTGCTAAAAATATAAATATTTACCAAAAAATAAAAACCAAC]
[+] EMBL BE039832 [TGGTCTCAACTCCTCCGATGTCCAGCTCTGGGACACCAGCTCAAACCGACTGCTGAGGACGATGCGAGGCGTGCACGATTCGAGGGTCGGTTCGCTGGCATGGAACAACAACATCCTCACAACTGGTGGAATGGATGGCAAGATTGTGAACAATGATGTGAGGATCAGGAACCATGTTGTGCAGACATACCAGGGGCATCAGCAGGAGGTGTGTGGCCTCAAGTGGTCAGGATCAGGGCAGCAGCTTGCCAGTGGTGGCAATGACAACCTCCTGCACATATGGGATGTGTCCATGGCATCCTCTATGCCGTCTGCTGGCCGCACCCAGTGGTTACACAGGCTTGAGGATCACTTGGCTGCTGTGAAGGCTCTCGCGTGGTGCCCATTCCAGAGCAACCTGCTGGCATCTGGTGGTGGTGGGAGTGACCGGTGCATCAAGTTCTGGAACACACATACCGGCGCATGCCTCAACTCGATCGACACTGGGTCACAAGTGTGCTCGCTGGTCTGGAACAAGAATGAGAGAGAGCTGCTAAGCTCACATGGATTCGCTCAGAATCAGCTCACTTTGTGGAAGTACCCGTCAATGGTTAAAAGGGCTGAACTCACTGGCCATACCTCTCGGGTCCTTTTTACGGGTCAAAAGCCTGAAGGTCTCACAGAAGCATCTGTTTCAGCAAATGAGACCCTTAAATTCTGAAACTTATTGGGGCTTCTGATCACCAAGATTGAAACAAGGTTCCACCTAGGAAGTTAACAATTCACCCATTTACATTCGTGAGAAAAAATCCCTTGGTTGTGACCAGTTTATGTAAAAGAAAATTGGGGGAAGGGACTTCAGAAAAATTCCCACCTTTCCCGAGATCAATATCACATCTACTCAAGATTTGCTTCAATAACTTTTTACATAACCGTAATATTTTGTGCTAAAAATATAAATATTTACCAAAAAATAAAAACCAAC]
consensusID : consensus_11305#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 764 fasta sequence
[TGTCCATGGCATCCTCTATGCCGTCTGCTGGCCGCACCCAGTGGTTACACAGGCTTGAGGATCACTTGGCTGCTGTGAAGGCTCTCGCGTGGTGCCCATTCCAGAGCAACCTGCTGGCATCTGGTGGTGGTGGGAGTGACCGGTGCATCAAGTTTTGGAACACACATACCGGCGCATGCCTCAACTCGATCGACACTGGGTCACAAGTGTGCTCGCTGGTCTGGAACAAGAATGAGAGAGAGCTGCTAAGCTCACATGGATTCGCTCAGAATCAGCTCACTTTGTGGAAGTACCCGTCAATGGTTAAGATGGCTGAACTCACTGGCCATACCTCTCGTGTCCTTTTCACGGCTCAGAGCCCTGATGGTCTCACAGTAGCATTTGCTGCAGCAGATGAGACCCTGAGATTTTGGAACGTATTTGGGGCTCCTGAAGCACCCAAGACTGCAACCAAGGGTTCCCACACTGGGATGTTCAACAATTCCAACCACATTCACATCCGTTGAGGAACACAATACCCTTGGTTCTGTGATCCAGTCATAACTTACAAAGAAGCAGACTTGGTGTGAAGGGTCATTTGCAGGAGAGATCATCTTACATTATTAGCAGAAGAGTTAGATTTTGACATGTTGTATATAAGGTTTTGTGCTATGTTGATAACAATTTTATGTACATCAAGACCGGTTTGATGTATTGATTGGCGTAGAAAAAAAGTAAAAAAATTGCTTTTCTGCCAGTAATATACATTTTTATAAAAAAAAAGA]
[-] EMBL CB674192 [TGTCCATGGCATCCTCTATGCCGTCTGCTGGCCGCACCCAGTGGTTACACAGGCTTGAGGATCACTTGGCTGCTGTGAAGGCTCTCGCGTGGTGCCCATTCCAGAGCAACCTGCTGGCATCTGGTGGTGGTGGGAGTGACCGGTGCATCAAGTTTTGGAACACACATACCGGCGCATGCCTCAACTCGATCGACACTGGGTCACAAGTGTGCTCGCTGGTCTGGAACAAGAATGAGAGAGAGCTGCTAAGCTCACATGGATTCGCTCAGAATCAGCTCACTTTGTGGAAGTACCCGTCAATGGTTAAGATGGCTGAACTCACTGGCCATACCTCTCGTGTCCTTTTCACGGCTCAGAGCCCTGATGGTCTCACAGTAGCATTTGCTGCAGCAGATGAGACCCTGAGATTTTGGAACGTATTTGGGGCTCCTGAAGCACCCAAGACTGCAACCAAGGGTTCCCACACTGGGATGTTCAACAATTCCAACCACATTCACATCCGTTGAGGAACACAATACCCTTGGTTCTGTGATCCAGTCATAACTTACAAAGAAGCAGACTTGGTGTGAAGGGTCATTTGCAGGAGAGATCATCTTACATTATTAGCAGAAGAGTTAGATTTTGACATGTTGTATATAAGGTTTTGTGCTATGTTGATAACAATTTTATGTACATCAAGACCGGTTTGATGTATTGATTGGCGTAGAAAAAAAGTAAAAAAATTGCTTTTCTGCCAGTAATATACATTTTTATAAAAAAAAAGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11305#0 ACTACTCCGCGAGGCACCTCTCTCTCTCTCTCTGTGAGTTTCGTGCGATCTCGCGAGCGA 60
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 ------------------------------------------------------------
consensus_11305#0 ATCCGGCGCGCGACCCAGGCTCTCCAAGATCCCCGCGCTCTCCTCTTCGGTTTACTGATC 120
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 ------------------------------------------------------------
consensus_11305#0 TGAAATCTCTGCGTCGAATCACCTGTTTGTTGGCTTGAATTGCTTGTCCGCGTCGTTGAT 180
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 ------------------------------------------------------------
consensus_11305#0 TTCGTTGTGGTTTCTTGATCTTCGGTGGAATTTCTTTGCGTTGGATTGTCTCCACCCCTG 240
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 ------------------------------------------------------------
consensus_11305#0 TTGGTTCTTGTCGATTCCCGATTTGAGTTGTTCGTTGGCGTGAAAAGGATTCTTTTTTTC 300
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 --AGCATCGCATCTCTCTTCTTCTCCCCCCCTCCTCGCCGCCTCTCCCCTCTCGTCGATC 58
consensus_11305#0 CCCTGAGATTTCTTGATTTTTGGTGAAATTTCTTTGGTGTTGAAATATCATCGCCTTTTG 360
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 CGACGCGCTTGGGGGAGTCGACGCTTTCTCTTCTCGCTTGCTAATCAAAGCTCTCGCATA 118
consensus_11305#0 GTTTCTTATCGATTCCGTCGTTCCGATTGGAGTTGTTCGTCGGCGTGAATTTTTTTTTCC 420
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 ATTCCCGTCTCTGTTTCGTTAATTTCCGCTTGTTTCATTTAATTACATAGTCTTCTTAGC 178
consensus_11305#0 TGATTCATCGTTGCTTGTTGATTGGGGATCGAATTTTTCGTCTACGATCCATCTTATTCG 480
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 GTGTTGATTTTTCTGTTTGATCCTGTGATTGATCTAGTTTACTTCTAGTGATCTT--TAT 236
consensus_11305#0 TGGTAGCAGTATCTCTTCTTGTTGCTGCGCTGTGCCCTGTTTATTTGTTTCTGCTTGTTG 540
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 TGCTGCTGGTATTACTGCTGTTTGTTTCCTTGTTATTTGCGTGCTTGTGCTCTTCTGTTT 296
consensus_11305#0 CTTCTGACCCATGGATGCAGGTTCGCACTCGATCTCATCGGAGAAGAGCAGCCGGTACGT 600
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 CTGCTAACC-ATGGACGCAGGCTCCCACTCGATCTCGTCGGAGAAGAGCCACGGACTCG- 354
consensus_11305#0 GGCGCCGCGACAGCCACTCCAGGAGGCCGGATCCAGACCGTACATGCCATCGCTGAGCAC 660
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 --CGCCGCGGCCGCCGCTCCAGGAGGCCGGCTCCCGCCCGTACATGCCATCGCTGAGCAC 412
consensus_11305#0 GGCGTCCCGCAACCCGTCAGCCAAGTGCTACGGTGACAGGTTTATTCCGGACAGGTCGGC 720
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 TGCCTCGCGCAACCCGTCGGCCAAGTGCTACGGGGATAGGTTCATACCGGACAGGTCGGC 472
consensus_11305#0 GATGGACATGGACATGGCGCACTACCTGCTGACGGAGCCGAGGAAGGACAAGGAGAACGC 780
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 GATGGACATGGACATGGCGCACTACCTGCTCACGGAGCCCAAGAAGGACAAGGAGAACGC 532
consensus_11305#0 GGCGGCGTCCCCGGCCAAGGAGGCGTACCGGAAGCTGCTGGCCGAGAAGATCCTCAACAA 840
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 GGCGGCGTCCCCGTCCAAGGAGGTGTACCGGAGGCTGCTCGCCGAGAAGCTGCTCAACAA 592
consensus_11305#0 CCGCACCAGGATTCTCTCCTTCCGCAACAAGCCGCCAGAGCCCGAGAGCATCCTCACGGA 900
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 CCGGACACGGATCCTCGCCTTCCGGAACAAGCCACCGGAGCCCGAGAACGTCTCTGCCGC 652
consensus_11305#0 GCTCCGTGCTGATGCGGCTTCCATCCAAGCCAAGCCGGCGAAGCAGCGCCGATACATTCC 960
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 G------GATACTGCTTCTACCCACCAGGCCAAGCCGGCCAAGCAGCGGCGCTACATTCC 706
consensus_11305#0 TCAGTCTGCCGAGAGGACTCTGGATGCTCCAGAGCTTGTTGATGATTACTACCTCAACCT 1020
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 CCAGTCTGCCGAGAGGACTCTGGATGCACCGGACCTCGTCGACGATTACTATCTCAACCT 766
consensus_11305#0 ACTGGACTGGGGAAGCAGCAATGTGCTATCCATTGCGCTGGGCAACTCGGTGTACCTCTG 1080
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 GCTGGACTGGGGAAGCAAGAACGTGCTGTCCATTGCGCTGGGCGACACGGTGTACCTGTG 826
consensus_11305#0 GGATGCCACGAACAGTTCAACTTCTGAGCTTGTTACCGTCGATGAGGACAATGGCCCTGT 1140
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 GGACGCCTCGAGCGGATCCACATCTGAGCTCGTGACCGTGGACGAGGACAGCGGCCCGAT 886
consensus_11305#0 CACCAGCGTAAGCTGGGCTCCTGATGGCCGGCACATCGCCGTTGGTCTCAACTCCTCCGA 1200
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------TGGTCTCAACTCCTCCGA 18
consensus_11305#1 CACCAGCGTCAGCTGGGCTCCTGACGGCCAGCATGTCGCCGTTGGCCTCAACTCTTCCGA 946
consensus_11305#0 TGTCCAGCTCTGGGACACCAGCTCAAACCGACTGCTGAGGACGATGCGAGGCGTGCACGA 1260
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 TGTCCAGCTCTGGGACACCAGCTCAAACCGACTGCTGAGGACGATGCGAGGCGTGCACGA 78
consensus_11305#1 CATCCAGCTCTGGGACACCAGCTCCAACCGACTGCTTAGAACTCTGAGAGGTGTGCACGA 1006
consensus_11305#0 TTCGAGGGTCGGTTCGCTGGCATGGAACAACAACATCCTCACAACTGGTGGAATGGATGG 1320
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 TTCGAGGGTCGGTTCGCTGGCATGGAACAACAACATCCTCACAACTGGTGGAATGGATGG 138
consensus_11305#1 ATCAAGAGTCGGTTCACTCGCATGGAACAACAACATCCTGACCACTGGCGGTATGGACGG 1066
consensus_11305#0 CAAGATTGTGAACAATGATGTGAGGATCAGGAACCATGTTGTGCAGACATACCAGGGGCA 1380
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 CAAGATTGTGAACAATGATGTGAGGATCAGGAACCATGTTGTGCAGACATACCAGGGGCA 198
consensus_11305#1 CAACATCGTGAACAATGACGTAAGAATCAGGAACCATGTCGTGCAGACATACCAGGGGCA 1126
consensus_11305#0 TCAGCAGGAGGTGTGTGGCCTCAAGTGGTCAGGATCAGGGCAGCAGCTTGCCAGTGGTGG 1440
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 TCAGCAGGAGGTGTGTGGCCTCAAGTGGTCAGGATCAGGGCAGCAGCTTGCCAGTGGTGG 258
consensus_11305#1 CAGCCAGGAGGTGTGCGGGCTCAAGTGGTCTGGTTCAGGGCAGCAGCTGGCCAGTGGTGG 1186
consensus_11305#0 CAATGACAACCTCCTGCACATATGGGATGTGTCCATGGCATCCTCTATGCCGTCTGCTGG 1500
consensus_11305#3 -----------------------------TGTCCATGGCATCCTCTATGCCGTCTGCTGG 31
consensus_11305#2 CAATGACAACCTCCTGCACATATGGGATGTGTCCATGGCATCCTCTATGCCGTCTGCTGG 318
consensus_11305#1 CAACGACAACCTTCTTCACATTTGGGATGTGTCCATGGCATCGTCCGTCCCATCTGCAGG 1246
************* ** * ** ***** **
consensus_11305#0 CCGCACCCAGTGGTTACACAGGCTTGAGGATCACTTGGCTGCTGTGAAGGCTCTCGCGTG 1560
consensus_11305#3 CCGCACCCAGTGGTTACACAGGCTTGAGGATCACTTGGCTGCTGTGAAGGCTCTCGCGTG 91
consensus_11305#2 CCGCACCCAGTGGTTACACAGGCTTGAGGATCACTTGGCTGCTGTGAAGGCTCTCGCGTG 378
consensus_11305#1 CCGCAACCAGTGGCTGCACAGGCTCGAGGATCACACGGCCGCTGTGAAAGCGCTTGCATG 1306
***** ******* * ******** ********* *** ******** ** ** ** **
consensus_11305#0 GTGCCCATTCCAGAGCAACCTGCTGGCATCTGGTGGTGGTGGGAGTGACCGGTGCATCAA 1620
consensus_11305#3 GTGCCCATTCCAGAGCAACCTGCTGGCATCTGGTGGTGGTGGGAGTGACCGGTGCATCAA 151
consensus_11305#2 GTGCCCATTCCAGAGCAACCTGCTGGCATCTGGTGGTGGTGGGAGTGACCGGTGCATCAA 438
consensus_11305#1 GTGCCCATTCCAGAGCAACCTGCTTGCAACTGGAGGTGGTGGTAGCGACCGGTGCATCAA 1366
************************ *** **** ******** ** **************
consensus_11305#0 GTTCTGGAACACACATACCGGCGCATGCCTCAACTCGATCGACACTGGGTCACAAGTGTG 1680
consensus_11305#3 GTTTTGGAACACACATACCGGCGCATGCCTCAACTCGATCGACACTGGGTCACAAGTGTG 211
consensus_11305#2 GTTCTGGAACACACATACCGGCGCATGCCTCAACTCGATCGACACTGGGTCACAAGTGTG 498
consensus_11305#1 GTTCTGGAACACACACACCGGTGCATGCTTGAACTCTGTCGATACCGGATCGCAGGTGTG 1426
*** *********** ***** ****** * ***** **** ** ** ** ** *****
consensus_11305#0 CTCGCTGGTCTGGAACAAGAATGAGAGAGAGCTGCTAAGCTCACATGGATTCGCTCAGAA 1740
consensus_11305#3 CTCGCTGGTCTGGAACAAGAATGAGAGAGAGCTGCTAAGCTCACATGGATTCGCTCAGAA 271
consensus_11305#2 CTCGCTGGTCTGGAACAAGAATGAGAGAGAGCTGCTAAGCTCACATGGATTCGCTCAGAA 558
consensus_11305#1 CGCTCTTCTATGGAACAAAAATGAGAGAGAGCTTCTGAGTTCACACGGATTCACGCAGAA 1486
* * ** * ******** ************** ** ** ***** ****** * *****
consensus_11305#0 TCAGCTCACTTTGTGGAAGTACCCGTCAATGGTTAAGATGGCTGAACTCACTGGCCATAC 1800
consensus_11305#3 TCAGCTCACTTTGTGGAAGTACCCGTCAATGGTTAAGATGGCTGAACTCACTGGCCATAC 331
consensus_11305#2 TCAGCTCACTTTGTGGAAGTACCCGTCAATGGTTAAAAGGGCTGAACTCACTGGCCATAC 618
consensus_11305#1 CCAGCTGACATTGTGGAAGTACCCGTCGATGGTTAAGATGGCTGAACTCACTGGCCATAC 1546
***** ** ***************** ******** * *********************
consensus_11305#0 CTCTCGTGTCCTTTTCACGGCTCAGGTTATCTTTTGCTCCTTGTACCTGCCGTTTAAATT 1860
consensus_11305#3 CTCTCGTGTCCTTTTCACGGCTCAG----------------------------------- 356
consensus_11305#2 CTCTCGGGTCCTTTTTACGGGTCAA----------------------------------- 643
consensus_11305#1 TTCCCGTGTCCTTTTCATGGCTCAG----------------------------------- 1571
** ** ******** * ** ***
consensus_11305#0 GACAAATATTGCTCTGAACAGATTGCTGATTACTTGTCTTGTGGTAATCTTGCAGAGCCC 1920
consensus_11305#3 -------------------------------------------------------AGCCC 361
consensus_11305#2 -------------------------------------------------------AAGCC 648
consensus_11305#1 -------------------------------------------------------AGTCC 1576
* **
consensus_11305#0 TGATGGTCTCACAGTAGCATCTGCTGCAGCAGATGAGACCCTGAGATTCTGGAACGTATT 1980
consensus_11305#3 TGATGGTCTCACAGTAGCATTTGCTGCAGCAGATGAGACCCTGAGATTTTGGAACGTATT 421
consensus_11305#2 TGAAGGTCTCACAGAAGCATCTGTTTCAGCAAATGAGACCCTTAAATTCTGAAACTTATT 708
consensus_11305#1 TGATGGTTGCACAGTAGCATCGGCTGCTGCAGATGAGACCCTGCGGTTCTGGAATGTGTT 1636
*** *** ***** ***** * * * *** ********** ** ** ** * **
consensus_11305#0 TGGGGCTCCTGAAGCACCCAAGACTGCAACCAAGGGTTCCCACACTGGGATGTTCAACAA 2040
consensus_11305#3 TGGGGCTCCTGAAGCACCCAAGACTGCAACCAAGGGTTCCCACACTGGGATGTTCAACAA 481
consensus_11305#2 -GGGGCTTCTGA--TCACCAAGATTGAAACAAGG---TTCCAC-CTAGGAAGTT-AACAA 760
consensus_11305#1 TGGTAGTCCTGAAGCCCCCAAGCCTGCAGCCAAGGCTTCCCACACTGGGATGTTCAACAG 1696
** * **** ***** ** * * * * * **** ** *** *** ****
consensus_11305#0 TTCCAACCACATTCACATCCGTTGAGGAACACAGTAAGTACTACCTTCATCTGTATTTCC 2100
consensus_11305#3 TTCCAACCACATTCACATCCGTTGAGGAACACA--------------------------- 514
consensus_11305#2 TTC--ACC-CATTTACATTCGTGAGAAAAAAT---------------------------- 789
consensus_11305#1 CTTCAACCATCTCAGATAAGGATGAACCAGGTGAACAAATTCGTCTATTTGATCTGGTCC 1756
* *** * * *
consensus_11305#0 CTAGCGCTTCTACACATTACACAGTATCAATGTGATGTCCAAAAGCTGCATGCATATCTA 2160
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 TTTGGACAGCTTAAAAATGATCGTGCTGATTGAGATGGCCTTGGCACAATAGGCTGTGCA 1816
consensus_11305#0 TTAACTACAAGTAGCTCATTGTGCTGTTTTGCTCTATGCATCTTTGCAGATACCCTTGGT 2220
consensus_11305#3 -------------------------------------------------ATACCCTTGGT 525
consensus_11305#2 ----------------------------------------------------CCCTTGGT 797
consensus_11305#1 AGAAGAGCA--------------------------------TTGCAGTGCTTCTCATGAT 1844
* * ** *
consensus_11305#0 TCTGTGATCCAGTCATAAC-TTACAAAGAAGCAGACTTGGTGTGAAGGGTCA-TTTGCAG 2278
consensus_11305#3 TCTGTGATCCAGTCATAAC-TTACAAAGAAGCAGACTTGGTGTGAAGGGTCA-TTTGCAG 583
consensus_11305#2 T--GTGACC-------AGT-TTATGTAAAAGAAAATTGGGG--GAAGGGAC--TTCAGAA 843
consensus_11305#1 A--ATGATCCAATCGTTTCGCTTTCAAACGGAAGATCGCAAGTGAGATTTGGCTTCATCG 1902
*** * * * * * * ** **
consensus_11305#0 GAGAGATCATCTTACATTA-------TTAGCAGAAGAGTTAGATTTTGACATGTTGTATA 2331
consensus_11305#3 GAGAGATCATCTTACATTA-------TTAGCAGAAGAGTTAGATTTTGACATGTTGTATA 636
consensus_11305#2 AAATTCCCACCTTTCCCGAG-----ATCAATATCACATCTAC-TCAAGATTTGCTTCA-A 896
consensus_11305#1 ATATCTTCATCTTTGATTGGTAGATACTATCTTCGACTTCAAGTTCACAAAGAGCACCAA 1962
** *** * * * * *
consensus_11305#0 TAAGGTTTTGTGCTATGTTGATAACAATTTTATGTACATCAAGACCGGTTTGATGTATTG 2391
consensus_11305#3 TAAGGTTTTGTGCTATGTTGATAACAATTTTATGTACATCAAGACCGGTTTGATGTATTG 696
consensus_11305#2 TAACTTTTTACA------TAACCGTAATATTTTGTGC-TAAAAA-----TATAAATATT- 943
consensus_11305#1 AAAGAACCTGGAA-ATGTGCAAAACCTTATCACTTAT-CGGGGAATGAAATGCTGAGTTG 2020
** * * * * * * **
consensus_11305#0 ATTGGCGTAGA-AAAAATGTAAAAAAATTGCTTTTCTGCCAGTAAT---ATACATT-TTT 2446
consensus_11305#3 ATTGGCGTAGA-AAAAAAGTAAAAAAATTGCTTTTCTGCCAGTAAT---ATACATT-TTT 751
consensus_11305#2 --TACCAAAAA-ATAAAAACCAAC------------------------------------ 964
consensus_11305#1 GTGACTTGAGATAGGAATATATACTTCTGGCAATTTAGTTAGTTATTCTGTACATTATCT 2080
* * * ** *
consensus_11305#0 ATATACTTGCCAGGCTTTTCTTGTAGTAAGTTCCTCTCGT-TGTGTAGTAACTTGTAATT 2505
consensus_11305#3 ATAAAAAAAAAGA----------------------------------------------- 764
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 AAAAAAAAGTTAGTTCTTCTGTAGAGCATATGTAAAGCACACACATAGTATCTAAAAAAA 2140
consensus_11305#0 TGATTGATTTTACTCTCGAGCCAATTGAGATGTCTGGTAACCAG---------------- 2549
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 TTGATCTTGTTTTAATTGCGCCAAAAGATCAATTTTTGAAGAATCTTTTGGTGGAAACAT 2200
consensus_11305#0 ------------------------------------------------------------
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 CAAATGATCGGTTTGATGTAACAAAACAAGAGGTGTAGTTCAAATATTTATGTACGTTCT 2260
consensus_11305#0 ------------------------------------------------------------
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 TCCTCCGTTTCCTATCATACTATTCAAAACTAGTCGTTTGACCTTTTTTAGTCAAATTTT 2320
consensus_11305#0 ------------------------------------------------------------
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 ATCTAGTTTGATCAATTTTTCAATACAAAACAAACATATTTGTAGTAGTAGTATTTTTTG 2380
consensus_11305#0 ------------------------------------------------------------
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 TTAGTTCATCCAGAGTACGGACACATTTGACCAAGGTTCTAACTTCTCTTGACAGATAGT 2440
consensus_11305#0 ------------------------------------------------------------
consensus_11305#3 ------------------------------------------------------------
consensus_11305#2 ------------------------------------------------------------
consensus_11305#1 AGCACTTGCAATTTTTGGTCATCTGAAGCAGTAGTAAGGCTGAGGTGCCGTAGTAGGGGA 2500
consensus_11305#0 --------------------
consensus_11305#3 --------------------
consensus_11305#2 --------------------
consensus_11305#1 TACCAAAATTGGAAATTTGA 2520
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||