These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11314#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2434 fasta sequence [CATAATCTCCACATCCTCCTCCTCCCACCTCTACTCCGGCCACCGGCCGCCTCCTCCCACGCTCCCCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCATCGCCACCCGCCTCCTCCTTCTAGCAGTAGTAATAAAGGAAGGAAGAAAATCCACCGCCCTACCCCTATCTATCCGTTGCCTCACGTCCGTTTCCCACATTTTCCGCTTCCTTCGTCCATCGCCATCTATTAACCCGCCCCCCCACGATTCCTGCCGAGAAATTTCTCCCCCCCACAGAGAGGGAGGCGATCCCTAGCCTCGTCCTGAATCTCGCGGCGCCGCCAATTCGATCTGCCCGCGCCGTCTCAGGGCGGCGAATCTTGGGCTGGAGTCGGGGGGAGAGATCCGGGATCTTCCTTTTCTTGGGTGTTCCCGGGACGCAAATCTTGCGGCCGCCGGGCAATGTGACTGGGGTTCTTGTGGGGGGTGAGGCGATTCGCGCGCGCATTCGGTGCTGAATCTTGCGGGGATGGAGCATGTGATCGGGGGGAAGTTTAAGCTGGGGAGGAAGATTGGGAGCGGATCTTTTGGGGAGCTATACCTTGGTGTGAATATACAGAGCAGCGAGGAGGTAGCCATCAAGTTGGAATCTGTAAAATCAAGGCATCCTCAGCTTCATTATGAGTCAAAACTATACATGCTTCTGCAGGGGGGAACTGGAATTCCTCATCTGAAGTGGTTTGGAGTGGAGGGGGAGTACAATGTCATGGTTATCGATCTTCTTGGTCCAAGTTTAGAGGACTTATTCAACTACTGCAACAGAAAGTTTTCTCTTAAAACAGTACTTATGCTTGCTGATCAGATGATCAACAGGGTAGAGTACATGCACACTAGGGGGTTTCTACATCGTGATATCAAGCCAGACAACTTCCTTATGGGTTTAGGCCGCAAAGCAAGCCAGGTTTATGTCATCGACTATGGTCTTGCAAAGAAATACCGGGACCTCCAAACTCATAAGCATATACCTTACAGGGAGAACAAAAATCTCACAGGAACAGCACGCTATGCTAGTGTAAACACCCATCTTGGAGTTGAACAAAGCAGGAGAGATGATTTAGAGTCTCTGGGCTATGTGCTTATGTATTTCTTAAGAGGAAGCCTTCCTTGGCAAGGTCTAAAAGCTGGCACAAAAAAACAGAAATATGACAAAATTAGTGAAAAGAAAATGCTTACTCCAGTTGAGGTTCTCTGTAAATCTTATCCCACAGAGTTCATTTCATACTTCCATTACTGTCGATCTTTGCGATTTGAAGATAAACCAGACTACAGCTATTTGAAGAGACTTTTCCGAGATCTATTCATCCGTGAAGGGTACCAGCTTGATTATATATTTGATTGGACGAAGCAAGGTTCAGAAAGTAACAGATTGCGATCAAGTGGAAGGACAAGTGGGTTGGTGGGACCATCTGCAGAACGGACTGAACGAGCTGCAGCAAGACAGGATGTTCCTGACAGATTCTCTGGTACAGTCGATCCATTTGCTAGAAGAACTGGCTCTGGTTCTGGCCATTACGGAGAGCACACAAAGCACAGAAATATATTGGATTCATTACTTGCACCCAAGACGGCTGTTGATTTAGATAAAAGAAGGCCCACATCATCATCTCGTAATGGGAGCACATCAAGGAAGGCTCTCTTGTCAAGCAGCAGACCAAGTTCTGGAGATCCCATTGATCCGAACCGCAGTAACCTAATTCCAACCAGCAGTGGCAGCAGTCGCCCATCAACTATGCAGAGGCTTCACCAGTCAACAGGACTTGAGACCAGGTCCTCGCTTACCAAAACTGCAAGAAATGTCCATGATGATCCCACTTTGAGGACCTTTGAACGCCTTTCAATCAGTGCTGACAGAAGGAAATAATGCTTCGAAGAGCAAAAGATGTGAGTTGCTGCTCCAGTG--AGGA-CACTGGGGATTCCTTCACACGATGATTACTGATCAACAAGTAAAAACCATTCTGTGCTACAGATGATGCTGAGATATGCTTAAG-AGTGAAGTTTGCTTACTGAATCTTGGCGCAAAAGAAATGGTTAAAGAAATCATTTTACACGCCATTCAGAAGAACCCGGACCAGCAA-CTGTGCTGGTCCAATTAATGCTGATGTTGATCAAATATTTGTAGAAATGTTATTGAAATAAAGCAGTTCATTACTAGCAAAATATGTACTATCACGTAGTATTTCCTTTGTGCACTGCAACTAGAACTTCTGCCACTCTGCCACTATACTCTTAAGATAATCAATATCCTTTTTTGCCTTAGTGCCCTTTAGATACTCCGTCACATTATTTCCTTAAAAACTTGGAGATCATGTAATCGTTATTAATATATCATACGATCAGATATCGTTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK101388 [CATAATCTCCACATCCTCCTCCTCCCACCTCTACTCCGGCCACCGGCCGCCTCCTCCCACGCTCCCCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCATCGCCACCCGCCTCCTCCTTCTAGCAGTAGTAATAAAGGAAGGAAGAAAATCCACCGCCCTACCCCTATCTATCCGTTGCCTCACGTCCGTTTCCCACATTTTCCGCTTCCTTCGTCCATCGCCATCTATTAACCCGCCCCCCCACGATTCCTGCCGAGAAATTTCTCCCCCCCACAGAGAGGGAGGCGATCCCTAGCCTCGTCCTGAATCTCGCGGCGCCGCCAATTCGATCTGCCCGCGCCGTCTCAGGGCGGCGAATCTTGGGCTGGAGTCGGGGGGAGAGATCCGGGATCTTCCTTTTCTTGGGTGTTCCCGGGACGCAAATCTTGCGGCCGCCGGGCAATGTGACTGGGGTTCTTGTGGGGGGTGAGGCGATTCGCGCGCGCATTCGGTGCTGAATCTTGCGGGGATGGAGCATGTGATCGGGGGGAAGTTTAAGCTGGGGAGGAAGATTGGGAGCGGATCTTTTGGGGAGCTATACCTTGGTGTGAATATACAGAGCAGCGAGGAGGTAGCCATCAAGTTGGAATCTGTAAAATCAAGGCATCCTCAGCTTCATTATGAGTCAAAACTATACATGCTTCTGCAGGGGGGAACTGGAATTCCTCATCTGAAGTGGTTTGGAGTGGAGGGGGAGTACAATGTCATGGTTATCGATCTTCTTGGTCCAAGTTTAGAGGACTTATTCAACTACTGCAACAGAAAGTTTTCTCTTAAAACAGTACTTATGCTTGCTGATCAGATGATCAACAGGGTAGAGTACATGCACACTAGGGGGTTTCTACATCGTGATATCAAGCCAGACAACTTCCTTATGGGTTTAGGCCGCAAAGCAAGCCAGGTTTATGTCATCGACTATGGTCTTGCAAAGAAATACCGGGACCTCCAAACTCATAAGCATATACCTTACAGGGAGAACAAAAATCTCACAGGAACAGCACGCTATGCTAGTGTAAACACCCATCTTGGAGTAGAACAAAGCAGGAGAGATGATTTAGAGTCTCTGGGCTATGTGCTTATGTATTTCTTAAGAGGAAGCCTTCCTTGGCAAGGTCTAAAAGCTGGCACAAAAAAACAGAAATATGACAAAATTAGTGAAAAGAAAATGCTTACTCCAGTTGAGGTTCTCTGTAAATCTTATCCCACAGAGTTCATTTCATACTTCCATTACTGTCGATCTTTGCGATTTGAAGATAAACCAGACTACAGCTATTTGAAGAGACTTTTCCGAGATCTATTCATCCGTGAAGGGTACCAGCTTGATTATATATTTGATTGGACGAAGCAAGGTTCAGAAAGTAACAGATTGCGATCAAGTGGAAGGACAAGTGGGTTGGTGGGACCATCTGCAGAACGGACTGAACGAGCTGCAGCAAGACAGGATGTTCCTGACAGATTCTCTGGTACAGTCGATCCATTTGCTAGAAGAACTGGCTCTGGTTCTGGCCATTACGGAGAGCACACAAAGCACAGAAATATATTGGATTCATTACTTGCACCCAAGACGGCTGTTGATTTAGATAAAAGAAGGCCCACATCATCATCTCGTAATGGGAGCACATCAAGGAAGGCTCTCTTGTCAAGCAGCAGACCAAGTTCTGGAGATCCCATTGATCCGAACCGCAGTAACCTAATTCCAACCAGCAGTGGCAGCAGTCGCCCATCAACTATGCAGAGGCTTCACCAGTCAACAGGACTTGAGACCAGGTCCTCGCTTACCAAAACTGCAAGAAATGTCCATGATGATCCCACTTTGAGGACCTTTGAACGCCTTTCAATCAGTGCTGACAGAAGGAAATAATGCTTCGAAGAGCAAAAGATGTGAGTTGCTGCTCCAGTG AGGA CACTGGGGATTCCTTCACACGATGATTACTGATCAACAAGTAAAAACCATTCTGTGCTACAGATGATGCTGAGATATGCTTAAG AGTGAAGTTTGCTTACTGAATCTTGGCGCAAAAGAAATGGTTAAAGAAATCATTTTACACGCCATTCAGAAGAACCCGGACCAGCAA CTGTGCTGGTCCAATTAATGCTGATGTTGATCAAATATTTGTAGAAATGTTATTGAAATAAAGCAGTTCATTACTAGCAAAATATGTACTATCACGTAGTATTTCCTTTGTGCACTGCAACTAGAACTTCTGCCACTCTGCCACTATACTCTTAAGATAATCAATATCCTTTTTTGCCTTAGTGCCCTTTAGATACTCCGTCACATTATTTCCTTAAAAACTTGGAGATCATGTAATCGTTATTAATATATCATACGATCAGATATCGTTA ] [+] EMBL CB682389 [ TTCCCTCGTCCATCGCCATCTATTAACCCGCCCCCCCACGATTCCTGCCGAGAAATTTCTCCCCCCCACAGAGAGGGAGGCGATCCCTAGCCTCGTCCTGAATCTCGCGGCGCCGCCAATTCGATCTGCCCGCGCCGTCTCAGGGCGGCGAATCTTGGGCTGGAGTCGGGGGGAGAGATCCGGGATCTTCCTTTTCTTGGGTGTTCCCGGGACGCAAATCTTGCGGCCGCCGGGCAATGTGACTGGGGTTCTTGTGGGGGGTGAGGCGATTCGCGCGCGCATTCGGTGCTGAATCTTGCGGGGATGGAGCATGTGATCGGGGGGAAGTTTAAGCTGGGGAGGAAGATTGGGAGCGGATCTTTTGGGGAGCTATACCTTGGTGTGAATATACAGAGCAGCGAGGAGGTAGCCATCAAGTTGGAATCTGTAAAATCAAGGCATCCTCAGCTTCATTATGAGTCAAAACTATACATGCTTCTGCAGGGGGGAACTGGAATTCCTCATCTGAAGTGGTTTGGAGTGGAGGGGGAGTACAATGTCATGGTTATCGATCTTCTTGGTCCAAGTTTAGAGGACTTATTCAACTACTGCAACAGAAAGTTTTCTCTTAAAACAGTACTTATGCTTGCTGATCAGATGATCAACAGGGTAGAGTACATGCACACTAGGGGGTTTCTACATCGTGATATCAAGCCAGACAACTTCCTTATGGGTTTAGGCCGCAAAGCAAGCCAGGTTTATGTCATCGACTATGGTCTTGCAAAGAAATACCGGGACCTCCAAACTCATAAGC ] [+] EMBL OSA487966 [ GTGATCGGGGGGAAGTTTAAGCTGGGGAGGAAGATTGGGAGCGGATCTTTTGGGGAGCTATACCTTGGTGTGAATATACAGAGCAGCGAGGAGGTAGCCATCAAGTTGGAATCTGTAAAATCAAGGCATCCTCAGCTTCATTATGAGTCAAAACTATACATGCTTCTGCAGGGGGGAACTGGAATTCCTCATCTGAAGTGGTTTGGAGTGGAGGGGGAGTACAATGTCATGGTTATCGATCTTCTTGGTCCAAGTTTAGAGGACTTATTCAACTACTGCAACAGAAAGTTTTCTCTTAAAACAGTACTTATGCTTGCTGATCAGATGATCAACAGGGTAGAGTACATGCACACTAGGGGGTTTCTACATCGTGATATCAAGCCAGACAACTTCCTTATGGGTTTAGGCCGCAAAGCAAGCCAGGTTTATGTCATCGACTATGTTCTTGCAAAGAAATACCGGGACCTCCAAACTCATAAGCATATACCTTACAGGGAGAACAAAAATCTCACAGGAACAGCACGCTATGCTAGTGTAAACACCCATCTTGGAGTTGAACAAAGCAGGAGAGATGATTTAGAGTCTCTGGGCTATGTGCTTATGTATTTCTTAAGAGGAAGCCTTCCTTGGCAAGGTCTAAAAGCTGGCACAAAAAAACAGAAATATGACAAAATTAGTGAAAAGAAAATGCTTACTCCAGTTGAGGTTCTCTGTAAATCTTATCCCACAGAGTTCATTTCATACTTCCATTACTGTCGATCTTTGCGATTTGAAGATAAACCAGACTACAGCTATTTGAAGAGACTTTTCCGAGATCTATTCATCCGTGAAGGGTACCAGCTTGATTATATATTTGATTGGACGAAGCAAGGTTCAGAAAGTAACAGATTGCGATCAAGTGGAAGGACAAGTGGGTTGGTGGGACCATCTGCAGAACGGACTGAACGAGCTGCAGCAAGACAGGATGTTCCTGACAGATTCTCTGGTACAGTCGATCCATTTGCTAGAAGAACTGGCTCTGGTTCTGGCCATTACGGAGAGCACACAAAGCACAGAAATATATTGGATTCATTACTTGCACCCAAGACGGCTGTTGATTTAGATAAAAGAAGGCCCACATCATCATCTCGTAATGGGAGCACATCAAGGAAGGCTCTCTTGTCAAGCAGCAGACCAAGTTCTGGAGATCCCATTGATCCGAACCGCAGTAACCTAATTCCAACCAGCAGTGGCAGCAGTCGCCCATCAACTATGCAGAGGCTTCACCAGTCAACAGGACTTGAGACCAGGTCCTCGCTTACCAAAACTGCAAGAAATGTCCATGATGATCCCACTTTGAGGACCTTTGAACGCCTTTCAATCAGTGCTGACAGAAGGAAATAATGCTTCGAAGAGCAAAAGATGTGAGTTGCTGCTCCAGTGSTAGGA CACTGGGGATTCCTTCACACGATGATTACTGATCAACAAGTAAAAACCATTCTGTGCTACAGATGATGCTGAGATATGCTTAAG AGTGAAGTTTGCTTACTGAATCTTGGCGCAAAAGAAATGGTTAAAGAAACCATTTTACACGCCATTCAGAAGAACCCGGACCAGCAACCCGTGCTGGTCCAATTAATGCTGATGTTGATCAAATATTTGTAGAAATGTTATTGAAATAAAGCAGTTCATTACTAGCAAAATATGTACTATCACGTAGTATTTCCTTTGTGCACTGCAACTAGAACTTCTGCCACTCTGCCACTATACTCTTAAGATAATCAATATCCTTTTTTG CTTAGTGCCCTTTAGATACTCCGTCACATTATTTCCTTAAAAACTTGGAGATCATGTAATCGTTATTAATATATCATACGATCAGATATCGTTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CB623151 [ TATTCAACTCCTGCAACAGAAAGTTTTCTCTTAAAACAGTACTTATGCTTGCTGATCAGATGATCAACAGGGTAGAGTACATGCACACTAGGGGGTTTCTACATCGTGATATCAAGCCAGACAACTTCCTTATGGGTTTAGGCCGCAAAGCAAGCCAGGTTTATGTCATCGACTATGGTCTTGCAAAGAAATACCGGGACCTCCAAACTCATAAGCATATACCTTACAGGGAGAACAAAAATCTCACAGGAACAGCACGCTATGCTAGTGTAAACACCCATCTTGGAGTTGAACAAAGCAGGAGAGATGATTTAGAGTCTCTGGGCTATGTGCTTATGTATTTCTTAAGAGGAAGCCTTCCTTGGCAAGGTCTAAAAGCTGGCACAAAAAAACAGAAATATGACAAAATTAGTGAAAAGAAAATGCTTACTCCAGTTGAGGTTCTCTGTAAATCTTATCCCACAGAGTTCATTTCATACTTCCATTACTGTCGATCTTTGCGATTTGAAGATAAACCAGACTACAGCTATTTGAAGAGACTTTTCCGAGATCTATTCATCCGTGAAGGGTACCAGCTTGATTATATATTTGATTGGACGAAGCAAGGTTCAGAAAGTAACAGATTGCGATCAAGTGGAAGGACAAGTGGGTTGGTGGGACCATCTGCAGAACGGACTGAACGAGCTGCAGCAAGACAGGATGTTCCTGACAGATTCTCTGGTACAGTCGATCCATTTGCTAGAAGAACTGGCTCTGGTTCTGGCCATTACGGAGAGCACACAAAGCACAGAAATATATTGGATT ] [-] EMBL CB682390 [ TGGTGGGACCATCTGCAGAACGGACTGAACGAGCTGCAGCAAGACAGGATGTTCCTGACAGATTCTCTGGTACAGTCGATCCATTTGCTAGAAGAACTGGCTCTGGTTCTGGCCATTACGGAGAGCACACAAAGCACAGAAATATATTGGATTCATTACTTGCACCCAAGACGGCTGTTGATTTAGATAAAAGAAGGCCCACATCATCATCTCGTAATGGGAGCACATCAAGGAAGGCTCTCTTGTCAAGCAGCAGACCAAGTTCTGGAGATCCCATTGATCCGAACCGCAGTAACCTAATTCCAACCAGCAGTGGCAGCAGTCGCCCATCAACTATGCAGAGGCTTCACCAGTCAACAGGACTTGAGACCAGGTCCTCGCTTACCAAAACTGCAAGAAATGTCCATGATGATCCCACTTTGAGGACCTTTGAACGCCTTTCAATCAGTGCTGACAGAAGGAAATAATGCTTCGAAGAGCAAAAGATGTGAGTTGCTGCTCCAGTG AGGA CACTGGGGATTCCTTCACACGATGATTACTGATCAACAAGTAAAAACCATTTTGTGCTACAGATGATGCTGAGATATGCTTAAG AGTGAAGTTTGCTTACTGAATCTTGGCGCAAAAGAAATGGTTAAAGAAATCATTTTACACGCCATTCAGAAGAACCCGGACCAGCAA CTGTGTTGGTCCAATTAATGCTGATGTGGATCAAATATTTGTAGAAATGTTAGGGAAATAAAGCAGTTC ] [+] EMBL CF322626 [ GCCCACATCATCATCTCGTAATGGGAGCACATCAAGGAAGGCTCTCTTGTCAAGCAGCAGACCAAGTTCTGGAGATCCCATTGATCCGAACCGCAGTAACCTAATTCCAACCAGCAGTGGCAGCAGTCGCCCATCAACTATGCAGAGGCTTCACCAGTCAACAGGACTTGAGACCAGGTCCTCGCTTACCAAAACTGCAAGAAATGTCCATGATGATCCCACTTTGAGGACCTTTGAACGCCTTTCAATCAGTGCTGACAGAAGGAAATAATGCTTCGAAGAGCAAAAGATGTGAGTTGCTGCTCCAGTG AGGACCACTGGGGATTCCTTCACACGATGATTACTGATCAACAAGTAAAAACCATTCTGTGCTACAGATGATGCTGAGATATGCTTAAGAAGTGAAGTTTGCTTACTGAATCTTGGCGCAAAAGAAATGGTTAAAGAAATCATTTTAC ] consensusID : consensus_11314#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 782 fasta sequence [TGGATTCATTACTTGCACCCAAGACGGCTGTTGATTTAGATAAAAGAAGGCCCACATCATCATCTCGTAATGGGAGCACATCAAGGAAGGCTCTCTTGTCAAGCAGCAGACCAAGTTCTGGAGATCCCATTGATCCGAACCGCAGTAACCTAATTCCAACCAGCAGTGGCAGCAGTCGCCCATCAACTATGCAGAGGCTTCACCAGTCAACAGGACTTGAGACCAGGTCCTCGCTTACCAAAACTGCAAGAAATGTCCATGATGATCCCACTTTGAGGACCTTTGAACGCCTTTCAATCAGTGCTGACAGAAGGAAATAATGCTTCGAAGAGCAAAAGATGTGAGTTGCTGCTCCAGTGAGGACACTGGGGATTCCTTCACACGATGATTACTGATCAACAAGTAAAAACCATTCTGTGCTACAGATGATGCTGAAATATGCTTAAGAGTGAAGTTTGCTTACTGAATCTTGGCGCAAAAGAAATGGTTAAAGAAATCATTTTACACGCCATTCAGAAGAACCCGGACCAGCATCCGTGCTGGTCCAATTAATGCTGATGTTGATCAAATATTTGTAGAAATGTTATTGAAATAAAGCAGTTCATCACGTAGTATTTCCTTTGTGCACTGCAACTAGAACTTCTGCCACTCTGCCACTATACTCTTAAGATAATCAATATCCTTTTTTGCCTTAGTGCCCTTTAGATACTCCGTCACATTATTTCCTTAAAAACTTGGAGATCATGTAATGGTTATTAATATATCATACGATCAGATATCGT] [-] EMBL CB623152 [TGGATTCATTACTTGCACCCAAGACGGCTGTTGATTTAGATAAAAGAAGGCCCACATCATCATCTCGTAATGGGAGCACATCAAGGAAGGCTCTCTTGTCAAGCAGCAGACCAAGTTCTGGAGATCCCATTGATCCGAACCGCAGTAACCTAATTCCAACCAGCAGTGGCAGCAGTCGCCCATCAACTATGCAGAGGCTTCACCAGTCAACAGGACTTGAGACCAGGTCCTCGCTTACCAAAACTGCAAGAAATGTCCATGATGATCCCACTTTGAGGACCTTTGAACGCCTTTCAATCAGTGCTGACAGAAGGAAATAATGCTTCGAAGAGCAAAAGATGTGAGTTGCTGCTCCAGTGAGGACACTGGGGATTCCTTCACACGATGATTACTGATCAACAAGTAAAAACCATTCTGTGCTACAGATGATGCTGAAATATGCTTAAGAGTGAAGTTTGCTTACTGAATCTTGGCGCAAAAGAAATGGTTAAAGAAATCATTTTACACGCCATTCAGAAGAACCCGGACCAGCATCCGTGCTGGTCCAATTAATGCTGATGTTGATCAAATATTTGTAGAAATGTTATTGAAATAAAGCAGTTCATCACGTAGTATTTCCTTTGTGCACTGCAACTAGAACTTCTGCCACTCTGCCACTATACTCTTAAGATAATCAATATCCTTTTTTGCCTTAGTGCCCTTTAGATACTCCGTCACATTATTTCCTTAAAAACTTGGAGATCATGTAATGGTTATTAATATATCATACGATCAGATATCGT] consensusID : consensus_11314#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 531 fasta sequence [GGAGGGGGAGTACAATGTCATGGTTATTGATCTTCTTGGTCCAAGTTTAGAGGACTTATTCAACTACTGCAACAGAAAGTTTTCTCTTAAAACAGTACTTATGCTTGCTGATCAGATGATCAACAGGGTAGAGTACATGCACACTAGGGGGTTTCTACATCGTGATATCAAGCCAGACAACTTCCTTATGGGTTTAGGCCGCAAAGCAAGCCAGGTTTATGTCATCGACTATGGTCTTGCAAAGAAATACCGGGACCTCCAAACTCATAAGCATATACCTTACAGGGAGAACAAAAATCTCACAGGAACAGCACGCTATGCTAGTGTAAACACCCATCTTGGAGTAGAACAAAGCAGGAGAGATGATTTAGAGTCTCTGGGCTATGTGCTTATGTATTTCTTAAGNNNAAGCCTTCCTTGGCAAGGTCTAAAAGCTGGCACAAAAAAACAGAAATATGACNNNNTTNNTGAAAAGAAAATGCTTACTCNNGNNGNNNNNCTCTGNNNNTCTTATNCNNNNNNNNNCATTTC] [+] EMBL CF197097 [GGAGGGGGAGTACAATGTCATGGTTATTGATCTTCTTGGTCCAAGTTTAGAGGACTTATTCAACTACTGCAACAGAAAGTTTTCTCTTAAAACAGTACTTATGCTTGCTGATCAGATGATCAACAGGGTAGAGTACATGCACACTAGGGGGTTTCTACATCGTGATATCAAGCCAGACAACTTCCTTATGGGTTTAGGCCGCAAAGCAAGCCAGGTTTATGTCATCGACTATGGTCTTGCAAAGAAATACCGGGACCTCCAAACTCATAAGCATATACCTTACAGGGAGAACAAAAATCTCACAGGAACAGCACGCTATGCTAGTGTAAACACCCATCTTGGAGTAGAACAAAGCAGGAGAGATGATTTAGAGTCTCTGGGCTATGTGCTTATGTATTTCTTAAGNNNAAGCCTTCCTTGGCAAGGTCTAAAAGCTGGCACAAAAAAACAGAAATATGACNNNNTTNNTGAAAAGAAAATGCTTACTCNNGNNGNNNNNCTCTGNNNNTCTTATNCNNNNNNNNNCATTTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11314#0 CATAATCTCCACATCCTCCTCCTCCCACCTCTACTCCGGCCACCGGCCGCCTCCTCCCAC 60 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 GCTCCCCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCATCGCCACCCGCCTCCTCCTTCTA 120 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 GCAGTAGTAATAAAGGAAGGAAGAAAATCCACCGCCCTACCCCTATCTATCCGTTGCCTC 180 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 ACGTCCGTTTCCCACATTTTCCGCTTCCTTCGTCCATCGCCATCTATTAACCCGCCCCCC 240 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 CACGATTCCTGCCGAGAAATTTCTCCCCCCCACAGAGAGGGAGGCGATCCCTAGCCTCGT 300 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 CCTGAATCTCGCGGCGCCGCCAATTCGATCTGCCCGCGCCGTCTCAGGGCGGCGAATCTT 360 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 GGGCTGGAGTCGGGGGGAGAGATCCGGGATCTTCCTTTTCTTGGGTGTTCCCGGGACGCA 420 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 AATCTTGCGGCCGCCGGGCAATGTGACTGGGGTTCTTGTGGGGGGTGAGGCGATTCGCGC 480 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 GCGCATTCGGTGCTGAATCTTGCGGGGATGGAGCATGTGATCGGGGGGAAGTTTAAGCTG 540 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 GGGAGGAAGATTGGGAGCGGATCTTTTGGGGAGCTATACCTTGGTGTGAATATACAGAGC 600 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 AGCGAGGAGGTAGCCATCAAGTTGGAATCTGTAAAATCAAGGCATCCTCAGCTTCATTAT 660 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 GAGTCAAAACTATACATGCTTCTGCAGGGGGGAACTGGAATTCCTCATCTGAAGTGGTTT 720 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 GGAGTGGAGGGGGAGTACAATGTCATGGTTATCGATCTTCTTGGTCCAAGTTTAGAGGAC 780 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 TTATTCAACTACTGCAACAGAAAGTTTTCTCTTAAAACAGTACTTATGCTTGCTGATCAG 840 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 ATGATCAACAGGGTAGAGTACATGCACACTAGGGGGTTTCTACATCGTGATATCAAGCCA 900 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 GACAACTTCCTTATGGGTTTAGGCCGCAAAGCAAGCCAGGTTTATGTCATCGACTATGGT 960 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 CTTGCAAAGAAATACCGGGACCTCCAAACTCATAAGCATATACCTTACAGGGAGAACAAA 1020 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 AATCTCACAGGAACAGCACGCTATGCTAGTGTAAACACCCATCTTGGAGTTGAACAAAGC 1080 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 AGGAGAGATGATTTAGAGTCTCTGGGCTATGTGCTTATGTATTTCTTAAGAGGAAGCCTT 1140 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 CCTTGGCAAGGTCTAAAAGCTGGCACAAAAAAACAGAAATATGACAAAATTAGTGAAAAG 1200 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 AAAATGCTTACTCCAGTTGAGGTTCTCTGTAAATCTTATCCCACAGAGTTCATTTCATAC 1260 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 TTCCATTACTGTCGATCTTTGCGATTTGAAGATAAACCAGACTACAGCTATTTGAAGAGA 1320 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 CTTTTCCGAGATCTATTCATCCGTGAAGGGTACCAGCTTGATTATATATTTGATTGGACG 1380 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 AAGCAAGGTTCAGAAAGTAACAGATTGCGATCAAGTGGAAGGACAAGTGGGTTGGTGGGA 1440 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 CCATCTGCAGAACGGACTGAACGAGCTGCAGCAAGACAGGATGTTCCTGACAGATTCTCT 1500 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 GGTACAGTCGATCCATTTGCTAGAAGAACTGGCTCTGGTTCTGGCCATTACGGAGAGCAC 1560 consensus_11314#1 ------------------------------------------------------------ consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 ACAAAGCACAGAAATATATTGGATTCATTACTTGCACCCAAGACGGCTGTTGATTTAGAT 1620 consensus_11314#1 -------------------TGGATTCATTACTTGCACCCAAGACGGCTGTTGATTTAGAT 41 consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 AAAAGAAGGCCCACATCATCATCTCGTAATGGGAGCACATCAAGGAAGGCTCTCTTGTCA 1680 consensus_11314#1 AAAAGAAGGCCCACATCATCATCTCGTAATGGGAGCACATCAAGGAAGGCTCTCTTGTCA 101 consensus_11314#2 -------------------------GGAGGGGGAGTACA--ATGTCATGGTTATTGATCT 33 * * ***** *** * * * * * * ** consensus_11314#0 AGCAGCAGACCAAGTTCTGGAGATCCCATTGATCCGAACCGCAGTAACCTAATTCCAACC 1740 consensus_11314#1 AGCAGCAGACCAAGTTCTGGAGATCCCATTGATCCGAACCGCAGTAACCTAATTCCAACC 161 consensus_11314#2 --TCTTGGTCCAAGTTTAGAGGACTTATTCAACTACTGCAACAGAAAGTTTTCTCTTAA- 90 * ******* * ** * * * *** ** * ** * consensus_11314#0 AGCAGTGGCAGCAGTCGCCCATCAACTATGCAGAGGCTTCACCAGTCAACAGGACTTGAG 1800 consensus_11314#1 AGCAGTGGCAGCAGTCGCCCATCAACTATGCAGAGGCTTCACCAGTCAACAGGACTTGAG 221 consensus_11314#2 AACAGTACTTATGCTTGCTGATCAGATGATCAACAGGGTAG--AGTACATGCACACTAGG 148 * **** * ** **** * ** * * *** * * * consensus_11314#0 ACCAGGTCCTCGCTTACCAAAACT--GCAAGAAATGTCCATGATGATCCCACTTTGAGGA 1858 consensus_11314#1 ACCAGGTCCTCGCTTACCAAAACT--GCAAGAAATGTCCATGATGATCCCACTTTGAGGA 279 consensus_11314#2 G---GGTTTCTACATCGTGATATCAAGCCAGACAACTTCCTTATGGGTTTAGGCCGCAAA 205 *** * * * * ** *** * * * * *** * * * consensus_11314#0 CCTTTGAACGCCTTT-CAATCAGTGCTGACAGAAGGAAATAATGCTTCGAAGAGCAAAAG 1917 consensus_11314#1 CCTTTGAACGCCTTT-CAATCAGTGCTGACAGAAGGAAATAATGCTTCGAAGAGCAAAAG 338 consensus_11314#2 GCAAGCCAGGTTTATGTCATCGACTATGGTCTTGCAAAGAAATACCG-GGACCTCCAAAC 264 * * * * * *** ** ** *** * * * * *** consensus_11314#0 ATGTGAGTTGCTGCTCCAGTGAGGACACTGGGGATTCCTTCACACGATGATTACTGATCA 1977 consensus_11314#1 ATGTGAGTTGCTGCTCCAGTGAGGACACTGGGGATTCCTTCACACGATGATTACTGATCA 398 consensus_11314#2 TCATAAGCATATACCTTA-CAGGGAGAACAAAAATC---TCACAGGAACAGCAC-GCTAT 319 * ** * * * *** * ** ***** ** * ** * * consensus_11314#0 ACAAGTAAAAAC---CATTCTGTGCTACAGATGATGCTGAGATATGCTTAAGAGT----- 2029 consensus_11314#1 ACAAGTAAAAAC---CATTCTGTGCTACAGATGATGCTGAAATATGCTTAAGAGT----- 450 consensus_11314#2 GCTAGTGTAAACACCCATCTTGGAGTAGAACAAAGCAGGAGAGATGATTTAGAGTCTCTG 379 * *** **** *** ** ** * * ** * *** ** ***** consensus_11314#0 -GAAGTTTGCTTACTGAATCTTGGCGCAAAAGAAATGGTTAAAGAAATCATTTTACACGC 2088 consensus_11314#1 -GAAGTTTGCTTACTGAATCTTGGCGCAAAAGAAATGGTTAAAGAAATCATTTTACACGC 509 consensus_11314#2 GGCTATGTGCTTATGTATTTCTTAAGNNNAAGCCTTCCTTGGCAAGGTC---TAAAAGCT 436 * * ****** * * * * *** * ** * ** * * * consensus_11314#0 CATTCAGAAGAACCCGGACCAGCAACTGTGCTGGTCCAATTAATGCTGATGTTGATCAAA 2148 consensus_11314#1 CATTCAGAAGAACCCGGACCAGCATCCGTGCTGGTCCAATTAATGCTGATGTTGATCAAA 569 consensus_11314#2 GGCACAAAAAAACAGAAATATGACNNNNTTNNTGAAAAGAAAATGCTTACTCNNGNNGNN 496 ** ** *** * * * * * ****** * consensus_11314#0 TATTTGTAGAAATGTTATT-GAAATAAAGCAGTTCATTACTAGCAAAATATGTACTATCA 2207 consensus_11314#1 TATTTGTAGAAATGTTATT-GAAATAAAGCAGTTCAT---------------------CA 607 consensus_11314#2 NNNCTCTGNNNNTCTTATNCNNNNNNNNNCATTTC------------------------- 531 * * * **** ** *** consensus_11314#0 CGTAGTATTTCCTTTGTGCACTGCAACTAGAACTTCTGCCACTCTGCCACTATACTCTTA 2267 consensus_11314#1 CGTAGTATTTCCTTTGTGCACTGCAACTAGAACTTCTGCCACTCTGCCACTATACTCTTA 667 consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 AGATAATCAATATCCTTTTTTGCCTTAGTGCCCTTTAGATACTCCGTCACATTATTTCCT 2327 consensus_11314#1 AGATAATCAATATCCTTTTTTGCCTTAGTGCCCTTTAGATACTCCGTCACATTATTTCCT 727 consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 TAAAAACTTGGAGATCATGTAATCGTTATTAATATATCATACGATCAGATATCGTTATTC 2387 consensus_11314#1 TAAAAACTTGGAGATCATGTAATGGTTATTAATATATCATACGATCAGATATCGT----- 782 consensus_11314#2 ------------------------------------------------------------ consensus_11314#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2434 consensus_11314#1 ----------------------------------------------- consensus_11314#2 ----------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||