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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11314#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2434 fasta sequence
[CATAATCTCCACATCCTCCTCCTCCCACCTCTACTCCGGCCACCGGCCGCCTCCTCCCACGCTCCCCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCATCGCCACCCGCCTCCTCCTTCTAGCAGTAGTAATAAAGGAAGGAAGAAAATCCACCGCCCTACCCCTATCTATCCGTTGCCTCACGTCCGTTTCCCACATTTTCCGCTTCCTTCGTCCATCGCCATCTATTAACCCGCCCCCCCACGATTCCTGCCGAGAAATTTCTCCCCCCCACAGAGAGGGAGGCGATCCCTAGCCTCGTCCTGAATCTCGCGGCGCCGCCAATTCGATCTGCCCGCGCCGTCTCAGGGCGGCGAATCTTGGGCTGGAGTCGGGGGGAGAGATCCGGGATCTTCCTTTTCTTGGGTGTTCCCGGGACGCAAATCTTGCGGCCGCCGGGCAATGTGACTGGGGTTCTTGTGGGGGGTGAGGCGATTCGCGCGCGCATTCGGTGCTGAATCTTGCGGGGATGGAGCATGTGATCGGGGGGAAGTTTAAGCTGGGGAGGAAGATTGGGAGCGGATCTTTTGGGGAGCTATACCTTGGTGTGAATATACAGAGCAGCGAGGAGGTAGCCATCAAGTTGGAATCTGTAAAATCAAGGCATCCTCAGCTTCATTATGAGTCAAAACTATACATGCTTCTGCAGGGGGGAACTGGAATTCCTCATCTGAAGTGGTTTGGAGTGGAGGGGGAGTACAATGTCATGGTTATCGATCTTCTTGGTCCAAGTTTAGAGGACTTATTCAACTACTGCAACAGAAAGTTTTCTCTTAAAACAGTACTTATGCTTGCTGATCAGATGATCAACAGGGTAGAGTACATGCACACTAGGGGGTTTCTACATCGTGATATCAAGCCAGACAACTTCCTTATGGGTTTAGGCCGCAAAGCAAGCCAGGTTTATGTCATCGACTATGGTCTTGCAAAGAAATACCGGGACCTCCAAACTCATAAGCATATACCTTACAGGGAGAACAAAAATCTCACAGGAACAGCACGCTATGCTAGTGTAAACACCCATCTTGGAGTTGAACAAAGCAGGAGAGATGATTTAGAGTCTCTGGGCTATGTGCTTATGTATTTCTTAAGAGGAAGCCTTCCTTGGCAAGGTCTAAAAGCTGGCACAAAAAAACAGAAATATGACAAAATTAGTGAAAAGAAAATGCTTACTCCAGTTGAGGTTCTCTGTAAATCTTATCCCACAGAGTTCATTTCATACTTCCATTACTGTCGATCTTTGCGATTTGAAGATAAACCAGACTACAGCTATTTGAAGAGACTTTTCCGAGATCTATTCATCCGTGAAGGGTACCAGCTTGATTATATATTTGATTGGACGAAGCAAGGTTCAGAAAGTAACAGATTGCGATCAAGTGGAAGGACAAGTGGGTTGGTGGGACCATCTGCAGAACGGACTGAACGAGCTGCAGCAAGACAGGATGTTCCTGACAGATTCTCTGGTACAGTCGATCCATTTGCTAGAAGAACTGGCTCTGGTTCTGGCCATTACGGAGAGCACACAAAGCACAGAAATATATTGGATTCATTACTTGCACCCAAGACGGCTGTTGATTTAGATAAAAGAAGGCCCACATCATCATCTCGTAATGGGAGCACATCAAGGAAGGCTCTCTTGTCAAGCAGCAGACCAAGTTCTGGAGATCCCATTGATCCGAACCGCAGTAACCTAATTCCAACCAGCAGTGGCAGCAGTCGCCCATCAACTATGCAGAGGCTTCACCAGTCAACAGGACTTGAGACCAGGTCCTCGCTTACCAAAACTGCAAGAAATGTCCATGATGATCCCACTTTGAGGACCTTTGAACGCCTTTCAATCAGTGCTGACAGAAGGAAATAATGCTTCGAAGAGCAAAAGATGTGAGTTGCTGCTCCAGTG--AGGA-CACTGGGGATTCCTTCACACGATGATTACTGATCAACAAGTAAAAACCATTCTGTGCTACAGATGATGCTGAGATATGCTTAAG-AGTGAAGTTTGCTTACTGAATCTTGGCGCAAAAGAAATGGTTAAAGAAATCATTTTACACGCCATTCAGAAGAACCCGGACCAGCAA-CTGTGCTGGTCCAATTAATGCTGATGTTGATCAAATATTTGTAGAAATGTTATTGAAATAAAGCAGTTCATTACTAGCAAAATATGTACTATCACGTAGTATTTCCTTTGTGCACTGCAACTAGAACTTCTGCCACTCTGCCACTATACTCTTAAGATAATCAATATCCTTTTTTGCCTTAGTGCCCTTTAGATACTCCGTCACATTATTTCCTTAAAAACTTGGAGATCATGTAATCGTTATTAATATATCATACGATCAGATATCGTTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK101388 [CATAATCTCCACATCCTCCTCCTCCCACCTCTACTCCGGCCACCGGCCGCCTCCTCCCACGCTCCCCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCATCGCCACCCGCCTCCTCCTTCTAGCAGTAGTAATAAAGGAAGGAAGAAAATCCACCGCCCTACCCCTATCTATCCGTTGCCTCACGTCCGTTTCCCACATTTTCCGCTTCCTTCGTCCATCGCCATCTATTAACCCGCCCCCCCACGATTCCTGCCGAGAAATTTCTCCCCCCCACAGAGAGGGAGGCGATCCCTAGCCTCGTCCTGAATCTCGCGGCGCCGCCAATTCGATCTGCCCGCGCCGTCTCAGGGCGGCGAATCTTGGGCTGGAGTCGGGGGGAGAGATCCGGGATCTTCCTTTTCTTGGGTGTTCCCGGGACGCAAATCTTGCGGCCGCCGGGCAATGTGACTGGGGTTCTTGTGGGGGGTGAGGCGATTCGCGCGCGCATTCGGTGCTGAATCTTGCGGGGATGGAGCATGTGATCGGGGGGAAGTTTAAGCTGGGGAGGAAGATTGGGAGCGGATCTTTTGGGGAGCTATACCTTGGTGTGAATATACAGAGCAGCGAGGAGGTAGCCATCAAGTTGGAATCTGTAAAATCAAGGCATCCTCAGCTTCATTATGAGTCAAAACTATACATGCTTCTGCAGGGGGGAACTGGAATTCCTCATCTGAAGTGGTTTGGAGTGGAGGGGGAGTACAATGTCATGGTTATCGATCTTCTTGGTCCAAGTTTAGAGGACTTATTCAACTACTGCAACAGAAAGTTTTCTCTTAAAACAGTACTTATGCTTGCTGATCAGATGATCAACAGGGTAGAGTACATGCACACTAGGGGGTTTCTACATCGTGATATCAAGCCAGACAACTTCCTTATGGGTTTAGGCCGCAAAGCAAGCCAGGTTTATGTCATCGACTATGGTCTTGCAAAGAAATACCGGGACCTCCAAACTCATAAGCATATACCTTACAGGGAGAACAAAAATCTCACAGGAACAGCACGCTATGCTAGTGTAAACACCCATCTTGGAGTAGAACAAAGCAGGAGAGATGATTTAGAGTCTCTGGGCTATGTGCTTATGTATTTCTTAAGAGGAAGCCTTCCTTGGCAAGGTCTAAAAGCTGGCACAAAAAAACAGAAATATGACAAAATTAGTGAAAAGAAAATGCTTACTCCAGTTGAGGTTCTCTGTAAATCTTATCCCACAGAGTTCATTTCATACTTCCATTACTGTCGATCTTTGCGATTTGAAGATAAACCAGACTACAGCTATTTGAAGAGACTTTTCCGAGATCTATTCATCCGTGAAGGGTACCAGCTTGATTATATATTTGATTGGACGAAGCAAGGTTCAGAAAGTAACAGATTGCGATCAAGTGGAAGGACAAGTGGGTTGGTGGGACCATCTGCAGAACGGACTGAACGAGCTGCAGCAAGACAGGATGTTCCTGACAGATTCTCTGGTACAGTCGATCCATTTGCTAGAAGAACTGGCTCTGGTTCTGGCCATTACGGAGAGCACACAAAGCACAGAAATATATTGGATTCATTACTTGCACCCAAGACGGCTGTTGATTTAGATAAAAGAAGGCCCACATCATCATCTCGTAATGGGAGCACATCAAGGAAGGCTCTCTTGTCAAGCAGCAGACCAAGTTCTGGAGATCCCATTGATCCGAACCGCAGTAACCTAATTCCAACCAGCAGTGGCAGCAGTCGCCCATCAACTATGCAGAGGCTTCACCAGTCAACAGGACTTGAGACCAGGTCCTCGCTTACCAAAACTGCAAGAAATGTCCATGATGATCCCACTTTGAGGACCTTTGAACGCCTTTCAATCAGTGCTGACAGAAGGAAATAATGCTTCGAAGAGCAAAAGATGTGAGTTGCTGCTCCAGTG AGGA CACTGGGGATTCCTTCACACGATGATTACTGATCAACAAGTAAAAACCATTCTGTGCTACAGATGATGCTGAGATATGCTTAAG AGTGAAGTTTGCTTACTGAATCTTGGCGCAAAAGAAATGGTTAAAGAAATCATTTTACACGCCATTCAGAAGAACCCGGACCAGCAA CTGTGCTGGTCCAATTAATGCTGATGTTGATCAAATATTTGTAGAAATGTTATTGAAATAAAGCAGTTCATTACTAGCAAAATATGTACTATCACGTAGTATTTCCTTTGTGCACTGCAACTAGAACTTCTGCCACTCTGCCACTATACTCTTAAGATAATCAATATCCTTTTTTGCCTTAGTGCCCTTTAGATACTCCGTCACATTATTTCCTTAAAAACTTGGAGATCATGTAATCGTTATTAATATATCATACGATCAGATATCGTTA ]
[+] EMBL CB682389 [ TTCCCTCGTCCATCGCCATCTATTAACCCGCCCCCCCACGATTCCTGCCGAGAAATTTCTCCCCCCCACAGAGAGGGAGGCGATCCCTAGCCTCGTCCTGAATCTCGCGGCGCCGCCAATTCGATCTGCCCGCGCCGTCTCAGGGCGGCGAATCTTGGGCTGGAGTCGGGGGGAGAGATCCGGGATCTTCCTTTTCTTGGGTGTTCCCGGGACGCAAATCTTGCGGCCGCCGGGCAATGTGACTGGGGTTCTTGTGGGGGGTGAGGCGATTCGCGCGCGCATTCGGTGCTGAATCTTGCGGGGATGGAGCATGTGATCGGGGGGAAGTTTAAGCTGGGGAGGAAGATTGGGAGCGGATCTTTTGGGGAGCTATACCTTGGTGTGAATATACAGAGCAGCGAGGAGGTAGCCATCAAGTTGGAATCTGTAAAATCAAGGCATCCTCAGCTTCATTATGAGTCAAAACTATACATGCTTCTGCAGGGGGGAACTGGAATTCCTCATCTGAAGTGGTTTGGAGTGGAGGGGGAGTACAATGTCATGGTTATCGATCTTCTTGGTCCAAGTTTAGAGGACTTATTCAACTACTGCAACAGAAAGTTTTCTCTTAAAACAGTACTTATGCTTGCTGATCAGATGATCAACAGGGTAGAGTACATGCACACTAGGGGGTTTCTACATCGTGATATCAAGCCAGACAACTTCCTTATGGGTTTAGGCCGCAAAGCAAGCCAGGTTTATGTCATCGACTATGGTCTTGCAAAGAAATACCGGGACCTCCAAACTCATAAGC ]
[+] EMBL OSA487966 [ GTGATCGGGGGGAAGTTTAAGCTGGGGAGGAAGATTGGGAGCGGATCTTTTGGGGAGCTATACCTTGGTGTGAATATACAGAGCAGCGAGGAGGTAGCCATCAAGTTGGAATCTGTAAAATCAAGGCATCCTCAGCTTCATTATGAGTCAAAACTATACATGCTTCTGCAGGGGGGAACTGGAATTCCTCATCTGAAGTGGTTTGGAGTGGAGGGGGAGTACAATGTCATGGTTATCGATCTTCTTGGTCCAAGTTTAGAGGACTTATTCAACTACTGCAACAGAAAGTTTTCTCTTAAAACAGTACTTATGCTTGCTGATCAGATGATCAACAGGGTAGAGTACATGCACACTAGGGGGTTTCTACATCGTGATATCAAGCCAGACAACTTCCTTATGGGTTTAGGCCGCAAAGCAAGCCAGGTTTATGTCATCGACTATGTTCTTGCAAAGAAATACCGGGACCTCCAAACTCATAAGCATATACCTTACAGGGAGAACAAAAATCTCACAGGAACAGCACGCTATGCTAGTGTAAACACCCATCTTGGAGTTGAACAAAGCAGGAGAGATGATTTAGAGTCTCTGGGCTATGTGCTTATGTATTTCTTAAGAGGAAGCCTTCCTTGGCAAGGTCTAAAAGCTGGCACAAAAAAACAGAAATATGACAAAATTAGTGAAAAGAAAATGCTTACTCCAGTTGAGGTTCTCTGTAAATCTTATCCCACAGAGTTCATTTCATACTTCCATTACTGTCGATCTTTGCGATTTGAAGATAAACCAGACTACAGCTATTTGAAGAGACTTTTCCGAGATCTATTCATCCGTGAAGGGTACCAGCTTGATTATATATTTGATTGGACGAAGCAAGGTTCAGAAAGTAACAGATTGCGATCAAGTGGAAGGACAAGTGGGTTGGTGGGACCATCTGCAGAACGGACTGAACGAGCTGCAGCAAGACAGGATGTTCCTGACAGATTCTCTGGTACAGTCGATCCATTTGCTAGAAGAACTGGCTCTGGTTCTGGCCATTACGGAGAGCACACAAAGCACAGAAATATATTGGATTCATTACTTGCACCCAAGACGGCTGTTGATTTAGATAAAAGAAGGCCCACATCATCATCTCGTAATGGGAGCACATCAAGGAAGGCTCTCTTGTCAAGCAGCAGACCAAGTTCTGGAGATCCCATTGATCCGAACCGCAGTAACCTAATTCCAACCAGCAGTGGCAGCAGTCGCCCATCAACTATGCAGAGGCTTCACCAGTCAACAGGACTTGAGACCAGGTCCTCGCTTACCAAAACTGCAAGAAATGTCCATGATGATCCCACTTTGAGGACCTTTGAACGCCTTTCAATCAGTGCTGACAGAAGGAAATAATGCTTCGAAGAGCAAAAGATGTGAGTTGCTGCTCCAGTGSTAGGA CACTGGGGATTCCTTCACACGATGATTACTGATCAACAAGTAAAAACCATTCTGTGCTACAGATGATGCTGAGATATGCTTAAG AGTGAAGTTTGCTTACTGAATCTTGGCGCAAAAGAAATGGTTAAAGAAACCATTTTACACGCCATTCAGAAGAACCCGGACCAGCAACCCGTGCTGGTCCAATTAATGCTGATGTTGATCAAATATTTGTAGAAATGTTATTGAAATAAAGCAGTTCATTACTAGCAAAATATGTACTATCACGTAGTATTTCCTTTGTGCACTGCAACTAGAACTTCTGCCACTCTGCCACTATACTCTTAAGATAATCAATATCCTTTTTTG CTTAGTGCCCTTTAGATACTCCGTCACATTATTTCCTTAAAAACTTGGAGATCATGTAATCGTTATTAATATATCATACGATCAGATATCGTTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CB623151 [ TATTCAACTCCTGCAACAGAAAGTTTTCTCTTAAAACAGTACTTATGCTTGCTGATCAGATGATCAACAGGGTAGAGTACATGCACACTAGGGGGTTTCTACATCGTGATATCAAGCCAGACAACTTCCTTATGGGTTTAGGCCGCAAAGCAAGCCAGGTTTATGTCATCGACTATGGTCTTGCAAAGAAATACCGGGACCTCCAAACTCATAAGCATATACCTTACAGGGAGAACAAAAATCTCACAGGAACAGCACGCTATGCTAGTGTAAACACCCATCTTGGAGTTGAACAAAGCAGGAGAGATGATTTAGAGTCTCTGGGCTATGTGCTTATGTATTTCTTAAGAGGAAGCCTTCCTTGGCAAGGTCTAAAAGCTGGCACAAAAAAACAGAAATATGACAAAATTAGTGAAAAGAAAATGCTTACTCCAGTTGAGGTTCTCTGTAAATCTTATCCCACAGAGTTCATTTCATACTTCCATTACTGTCGATCTTTGCGATTTGAAGATAAACCAGACTACAGCTATTTGAAGAGACTTTTCCGAGATCTATTCATCCGTGAAGGGTACCAGCTTGATTATATATTTGATTGGACGAAGCAAGGTTCAGAAAGTAACAGATTGCGATCAAGTGGAAGGACAAGTGGGTTGGTGGGACCATCTGCAGAACGGACTGAACGAGCTGCAGCAAGACAGGATGTTCCTGACAGATTCTCTGGTACAGTCGATCCATTTGCTAGAAGAACTGGCTCTGGTTCTGGCCATTACGGAGAGCACACAAAGCACAGAAATATATTGGATT ]
[-] EMBL CB682390 [ TGGTGGGACCATCTGCAGAACGGACTGAACGAGCTGCAGCAAGACAGGATGTTCCTGACAGATTCTCTGGTACAGTCGATCCATTTGCTAGAAGAACTGGCTCTGGTTCTGGCCATTACGGAGAGCACACAAAGCACAGAAATATATTGGATTCATTACTTGCACCCAAGACGGCTGTTGATTTAGATAAAAGAAGGCCCACATCATCATCTCGTAATGGGAGCACATCAAGGAAGGCTCTCTTGTCAAGCAGCAGACCAAGTTCTGGAGATCCCATTGATCCGAACCGCAGTAACCTAATTCCAACCAGCAGTGGCAGCAGTCGCCCATCAACTATGCAGAGGCTTCACCAGTCAACAGGACTTGAGACCAGGTCCTCGCTTACCAAAACTGCAAGAAATGTCCATGATGATCCCACTTTGAGGACCTTTGAACGCCTTTCAATCAGTGCTGACAGAAGGAAATAATGCTTCGAAGAGCAAAAGATGTGAGTTGCTGCTCCAGTG AGGA CACTGGGGATTCCTTCACACGATGATTACTGATCAACAAGTAAAAACCATTTTGTGCTACAGATGATGCTGAGATATGCTTAAG AGTGAAGTTTGCTTACTGAATCTTGGCGCAAAAGAAATGGTTAAAGAAATCATTTTACACGCCATTCAGAAGAACCCGGACCAGCAA CTGTGTTGGTCCAATTAATGCTGATGTGGATCAAATATTTGTAGAAATGTTAGGGAAATAAAGCAGTTC ]
[+] EMBL CF322626 [ GCCCACATCATCATCTCGTAATGGGAGCACATCAAGGAAGGCTCTCTTGTCAAGCAGCAGACCAAGTTCTGGAGATCCCATTGATCCGAACCGCAGTAACCTAATTCCAACCAGCAGTGGCAGCAGTCGCCCATCAACTATGCAGAGGCTTCACCAGTCAACAGGACTTGAGACCAGGTCCTCGCTTACCAAAACTGCAAGAAATGTCCATGATGATCCCACTTTGAGGACCTTTGAACGCCTTTCAATCAGTGCTGACAGAAGGAAATAATGCTTCGAAGAGCAAAAGATGTGAGTTGCTGCTCCAGTG AGGACCACTGGGGATTCCTTCACACGATGATTACTGATCAACAAGTAAAAACCATTCTGTGCTACAGATGATGCTGAGATATGCTTAAGAAGTGAAGTTTGCTTACTGAATCTTGGCGCAAAAGAAATGGTTAAAGAAATCATTTTAC ]
consensusID : consensus_11314#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 782 fasta sequence
[TGGATTCATTACTTGCACCCAAGACGGCTGTTGATTTAGATAAAAGAAGGCCCACATCATCATCTCGTAATGGGAGCACATCAAGGAAGGCTCTCTTGTCAAGCAGCAGACCAAGTTCTGGAGATCCCATTGATCCGAACCGCAGTAACCTAATTCCAACCAGCAGTGGCAGCAGTCGCCCATCAACTATGCAGAGGCTTCACCAGTCAACAGGACTTGAGACCAGGTCCTCGCTTACCAAAACTGCAAGAAATGTCCATGATGATCCCACTTTGAGGACCTTTGAACGCCTTTCAATCAGTGCTGACAGAAGGAAATAATGCTTCGAAGAGCAAAAGATGTGAGTTGCTGCTCCAGTGAGGACACTGGGGATTCCTTCACACGATGATTACTGATCAACAAGTAAAAACCATTCTGTGCTACAGATGATGCTGAAATATGCTTAAGAGTGAAGTTTGCTTACTGAATCTTGGCGCAAAAGAAATGGTTAAAGAAATCATTTTACACGCCATTCAGAAGAACCCGGACCAGCATCCGTGCTGGTCCAATTAATGCTGATGTTGATCAAATATTTGTAGAAATGTTATTGAAATAAAGCAGTTCATCACGTAGTATTTCCTTTGTGCACTGCAACTAGAACTTCTGCCACTCTGCCACTATACTCTTAAGATAATCAATATCCTTTTTTGCCTTAGTGCCCTTTAGATACTCCGTCACATTATTTCCTTAAAAACTTGGAGATCATGTAATGGTTATTAATATATCATACGATCAGATATCGT]
[-] EMBL CB623152 [TGGATTCATTACTTGCACCCAAGACGGCTGTTGATTTAGATAAAAGAAGGCCCACATCATCATCTCGTAATGGGAGCACATCAAGGAAGGCTCTCTTGTCAAGCAGCAGACCAAGTTCTGGAGATCCCATTGATCCGAACCGCAGTAACCTAATTCCAACCAGCAGTGGCAGCAGTCGCCCATCAACTATGCAGAGGCTTCACCAGTCAACAGGACTTGAGACCAGGTCCTCGCTTACCAAAACTGCAAGAAATGTCCATGATGATCCCACTTTGAGGACCTTTGAACGCCTTTCAATCAGTGCTGACAGAAGGAAATAATGCTTCGAAGAGCAAAAGATGTGAGTTGCTGCTCCAGTGAGGACACTGGGGATTCCTTCACACGATGATTACTGATCAACAAGTAAAAACCATTCTGTGCTACAGATGATGCTGAAATATGCTTAAGAGTGAAGTTTGCTTACTGAATCTTGGCGCAAAAGAAATGGTTAAAGAAATCATTTTACACGCCATTCAGAAGAACCCGGACCAGCATCCGTGCTGGTCCAATTAATGCTGATGTTGATCAAATATTTGTAGAAATGTTATTGAAATAAAGCAGTTCATCACGTAGTATTTCCTTTGTGCACTGCAACTAGAACTTCTGCCACTCTGCCACTATACTCTTAAGATAATCAATATCCTTTTTTGCCTTAGTGCCCTTTAGATACTCCGTCACATTATTTCCTTAAAAACTTGGAGATCATGTAATGGTTATTAATATATCATACGATCAGATATCGT]
consensusID : consensus_11314#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 531 fasta sequence
[GGAGGGGGAGTACAATGTCATGGTTATTGATCTTCTTGGTCCAAGTTTAGAGGACTTATTCAACTACTGCAACAGAAAGTTTTCTCTTAAAACAGTACTTATGCTTGCTGATCAGATGATCAACAGGGTAGAGTACATGCACACTAGGGGGTTTCTACATCGTGATATCAAGCCAGACAACTTCCTTATGGGTTTAGGCCGCAAAGCAAGCCAGGTTTATGTCATCGACTATGGTCTTGCAAAGAAATACCGGGACCTCCAAACTCATAAGCATATACCTTACAGGGAGAACAAAAATCTCACAGGAACAGCACGCTATGCTAGTGTAAACACCCATCTTGGAGTAGAACAAAGCAGGAGAGATGATTTAGAGTCTCTGGGCTATGTGCTTATGTATTTCTTAAGNNNAAGCCTTCCTTGGCAAGGTCTAAAAGCTGGCACAAAAAAACAGAAATATGACNNNNTTNNTGAAAAGAAAATGCTTACTCNNGNNGNNNNNCTCTGNNNNTCTTATNCNNNNNNNNNCATTTC]
[+] EMBL CF197097 [GGAGGGGGAGTACAATGTCATGGTTATTGATCTTCTTGGTCCAAGTTTAGAGGACTTATTCAACTACTGCAACAGAAAGTTTTCTCTTAAAACAGTACTTATGCTTGCTGATCAGATGATCAACAGGGTAGAGTACATGCACACTAGGGGGTTTCTACATCGTGATATCAAGCCAGACAACTTCCTTATGGGTTTAGGCCGCAAAGCAAGCCAGGTTTATGTCATCGACTATGGTCTTGCAAAGAAATACCGGGACCTCCAAACTCATAAGCATATACCTTACAGGGAGAACAAAAATCTCACAGGAACAGCACGCTATGCTAGTGTAAACACCCATCTTGGAGTAGAACAAAGCAGGAGAGATGATTTAGAGTCTCTGGGCTATGTGCTTATGTATTTCTTAAGNNNAAGCCTTCCTTGGCAAGGTCTAAAAGCTGGCACAAAAAAACAGAAATATGACNNNNTTNNTGAAAAGAAAATGCTTACTCNNGNNGNNNNNCTCTGNNNNTCTTATNCNNNNNNNNNCATTTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11314#0 CATAATCTCCACATCCTCCTCCTCCCACCTCTACTCCGGCCACCGGCCGCCTCCTCCCAC 60
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 GCTCCCCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCATCGCCACCCGCCTCCTCCTTCTA 120
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 GCAGTAGTAATAAAGGAAGGAAGAAAATCCACCGCCCTACCCCTATCTATCCGTTGCCTC 180
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 ACGTCCGTTTCCCACATTTTCCGCTTCCTTCGTCCATCGCCATCTATTAACCCGCCCCCC 240
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 CACGATTCCTGCCGAGAAATTTCTCCCCCCCACAGAGAGGGAGGCGATCCCTAGCCTCGT 300
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 CCTGAATCTCGCGGCGCCGCCAATTCGATCTGCCCGCGCCGTCTCAGGGCGGCGAATCTT 360
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 GGGCTGGAGTCGGGGGGAGAGATCCGGGATCTTCCTTTTCTTGGGTGTTCCCGGGACGCA 420
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 AATCTTGCGGCCGCCGGGCAATGTGACTGGGGTTCTTGTGGGGGGTGAGGCGATTCGCGC 480
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 GCGCATTCGGTGCTGAATCTTGCGGGGATGGAGCATGTGATCGGGGGGAAGTTTAAGCTG 540
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 GGGAGGAAGATTGGGAGCGGATCTTTTGGGGAGCTATACCTTGGTGTGAATATACAGAGC 600
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 AGCGAGGAGGTAGCCATCAAGTTGGAATCTGTAAAATCAAGGCATCCTCAGCTTCATTAT 660
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 GAGTCAAAACTATACATGCTTCTGCAGGGGGGAACTGGAATTCCTCATCTGAAGTGGTTT 720
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 GGAGTGGAGGGGGAGTACAATGTCATGGTTATCGATCTTCTTGGTCCAAGTTTAGAGGAC 780
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 TTATTCAACTACTGCAACAGAAAGTTTTCTCTTAAAACAGTACTTATGCTTGCTGATCAG 840
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 ATGATCAACAGGGTAGAGTACATGCACACTAGGGGGTTTCTACATCGTGATATCAAGCCA 900
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 GACAACTTCCTTATGGGTTTAGGCCGCAAAGCAAGCCAGGTTTATGTCATCGACTATGGT 960
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 CTTGCAAAGAAATACCGGGACCTCCAAACTCATAAGCATATACCTTACAGGGAGAACAAA 1020
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 AATCTCACAGGAACAGCACGCTATGCTAGTGTAAACACCCATCTTGGAGTTGAACAAAGC 1080
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 AGGAGAGATGATTTAGAGTCTCTGGGCTATGTGCTTATGTATTTCTTAAGAGGAAGCCTT 1140
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 CCTTGGCAAGGTCTAAAAGCTGGCACAAAAAAACAGAAATATGACAAAATTAGTGAAAAG 1200
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 AAAATGCTTACTCCAGTTGAGGTTCTCTGTAAATCTTATCCCACAGAGTTCATTTCATAC 1260
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 TTCCATTACTGTCGATCTTTGCGATTTGAAGATAAACCAGACTACAGCTATTTGAAGAGA 1320
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 CTTTTCCGAGATCTATTCATCCGTGAAGGGTACCAGCTTGATTATATATTTGATTGGACG 1380
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 AAGCAAGGTTCAGAAAGTAACAGATTGCGATCAAGTGGAAGGACAAGTGGGTTGGTGGGA 1440
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 CCATCTGCAGAACGGACTGAACGAGCTGCAGCAAGACAGGATGTTCCTGACAGATTCTCT 1500
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 GGTACAGTCGATCCATTTGCTAGAAGAACTGGCTCTGGTTCTGGCCATTACGGAGAGCAC 1560
consensus_11314#1 ------------------------------------------------------------
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 ACAAAGCACAGAAATATATTGGATTCATTACTTGCACCCAAGACGGCTGTTGATTTAGAT 1620
consensus_11314#1 -------------------TGGATTCATTACTTGCACCCAAGACGGCTGTTGATTTAGAT 41
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 AAAAGAAGGCCCACATCATCATCTCGTAATGGGAGCACATCAAGGAAGGCTCTCTTGTCA 1680
consensus_11314#1 AAAAGAAGGCCCACATCATCATCTCGTAATGGGAGCACATCAAGGAAGGCTCTCTTGTCA 101
consensus_11314#2 -------------------------GGAGGGGGAGTACA--ATGTCATGGTTATTGATCT 33
* * ***** *** * * * * * * **
consensus_11314#0 AGCAGCAGACCAAGTTCTGGAGATCCCATTGATCCGAACCGCAGTAACCTAATTCCAACC 1740
consensus_11314#1 AGCAGCAGACCAAGTTCTGGAGATCCCATTGATCCGAACCGCAGTAACCTAATTCCAACC 161
consensus_11314#2 --TCTTGGTCCAAGTTTAGAGGACTTATTCAACTACTGCAACAGAAAGTTTTCTCTTAA- 90
* ******* * ** * * * *** ** * ** *
consensus_11314#0 AGCAGTGGCAGCAGTCGCCCATCAACTATGCAGAGGCTTCACCAGTCAACAGGACTTGAG 1800
consensus_11314#1 AGCAGTGGCAGCAGTCGCCCATCAACTATGCAGAGGCTTCACCAGTCAACAGGACTTGAG 221
consensus_11314#2 AACAGTACTTATGCTTGCTGATCAGATGATCAACAGGGTAG--AGTACATGCACACTAGG 148
* **** * ** **** * ** * * *** * * *
consensus_11314#0 ACCAGGTCCTCGCTTACCAAAACT--GCAAGAAATGTCCATGATGATCCCACTTTGAGGA 1858
consensus_11314#1 ACCAGGTCCTCGCTTACCAAAACT--GCAAGAAATGTCCATGATGATCCCACTTTGAGGA 279
consensus_11314#2 G---GGTTTCTACATCGTGATATCAAGCCAGACAACTTCCTTATGGGTTTAGGCCGCAAA 205
*** * * * * ** *** * * * * *** * * *
consensus_11314#0 CCTTTGAACGCCTTT-CAATCAGTGCTGACAGAAGGAAATAATGCTTCGAAGAGCAAAAG 1917
consensus_11314#1 CCTTTGAACGCCTTT-CAATCAGTGCTGACAGAAGGAAATAATGCTTCGAAGAGCAAAAG 338
consensus_11314#2 GCAAGCCAGGTTTATGTCATCGACTATGGTCTTGCAAAGAAATACCG-GGACCTCCAAAC 264
* * * * * *** ** ** *** * * * * ***
consensus_11314#0 ATGTGAGTTGCTGCTCCAGTGAGGACACTGGGGATTCCTTCACACGATGATTACTGATCA 1977
consensus_11314#1 ATGTGAGTTGCTGCTCCAGTGAGGACACTGGGGATTCCTTCACACGATGATTACTGATCA 398
consensus_11314#2 TCATAAGCATATACCTTA-CAGGGAGAACAAAAATC---TCACAGGAACAGCAC-GCTAT 319
* ** * * * *** * ** ***** ** * ** * *
consensus_11314#0 ACAAGTAAAAAC---CATTCTGTGCTACAGATGATGCTGAGATATGCTTAAGAGT----- 2029
consensus_11314#1 ACAAGTAAAAAC---CATTCTGTGCTACAGATGATGCTGAAATATGCTTAAGAGT----- 450
consensus_11314#2 GCTAGTGTAAACACCCATCTTGGAGTAGAACAAAGCAGGAGAGATGATTTAGAGTCTCTG 379
* *** **** *** ** ** * * ** * *** ** *****
consensus_11314#0 -GAAGTTTGCTTACTGAATCTTGGCGCAAAAGAAATGGTTAAAGAAATCATTTTACACGC 2088
consensus_11314#1 -GAAGTTTGCTTACTGAATCTTGGCGCAAAAGAAATGGTTAAAGAAATCATTTTACACGC 509
consensus_11314#2 GGCTATGTGCTTATGTATTTCTTAAGNNNAAGCCTTCCTTGGCAAGGTC---TAAAAGCT 436
* * ****** * * * * *** * ** * ** * * *
consensus_11314#0 CATTCAGAAGAACCCGGACCAGCAACTGTGCTGGTCCAATTAATGCTGATGTTGATCAAA 2148
consensus_11314#1 CATTCAGAAGAACCCGGACCAGCATCCGTGCTGGTCCAATTAATGCTGATGTTGATCAAA 569
consensus_11314#2 GGCACAAAAAAACAGAAATATGACNNNNTTNNTGAAAAGAAAATGCTTACTCNNGNNGNN 496
** ** *** * * * * * ****** *
consensus_11314#0 TATTTGTAGAAATGTTATT-GAAATAAAGCAGTTCATTACTAGCAAAATATGTACTATCA 2207
consensus_11314#1 TATTTGTAGAAATGTTATT-GAAATAAAGCAGTTCAT---------------------CA 607
consensus_11314#2 NNNCTCTGNNNNTCTTATNCNNNNNNNNNCATTTC------------------------- 531
* * * **** ** ***
consensus_11314#0 CGTAGTATTTCCTTTGTGCACTGCAACTAGAACTTCTGCCACTCTGCCACTATACTCTTA 2267
consensus_11314#1 CGTAGTATTTCCTTTGTGCACTGCAACTAGAACTTCTGCCACTCTGCCACTATACTCTTA 667
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 AGATAATCAATATCCTTTTTTGCCTTAGTGCCCTTTAGATACTCCGTCACATTATTTCCT 2327
consensus_11314#1 AGATAATCAATATCCTTTTTTGCCTTAGTGCCCTTTAGATACTCCGTCACATTATTTCCT 727
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 TAAAAACTTGGAGATCATGTAATCGTTATTAATATATCATACGATCAGATATCGTTATTC 2387
consensus_11314#1 TAAAAACTTGGAGATCATGTAATGGTTATTAATATATCATACGATCAGATATCGT----- 782
consensus_11314#2 ------------------------------------------------------------
consensus_11314#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2434
consensus_11314#1 -----------------------------------------------
consensus_11314#2 -----------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||