cluster # 11328

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Oryza sativa
cluster # 11328 cluster # 11328 Sequences # 8 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11328#0 length = 774 sequences # 5
consensus_11328#1 length = 580 sequences # 1

consensus_11328#2 length = 553 sequences # 1
consensus_11328#3 length = 384 sequences # 1

consensusID : consensus_11328#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 774
fasta sequence

                              [GAGCTCCTCGAGCTCTCTCTCTCCTGTTATGTCTAGCCACCACCGGCCACTGCCGATCTCCCTCACCGGAGTGTTTCTGGCCAAGCCCTTGCGCCATCGGGTTTGCCTCGACGAGGCGAACTCATTTTCCTAGTTTCCCCTTCCTTTCCCCTTCCGAAACCAACCATCACAGCCACCTCCTCTTGTTGCCGGAGCAAGCTCTTGCCTTCGCCGTTCCGGTCTCCTCCCTAACCCTCTCTACCGGAAACCACCCTCCCTGAGTGCGCGTTGCTCGGGAACGCGTGTTGCCGCCGGCGTCACAGTCTTCTATCCACCGGAGAGCCGGCGCCCCTCCTCTCCCTTCTCTCTGTTTGTTCGTGGAGAAAGAGAGAAGAAGCAGGAAAGAAGAAGAAGAAGAAAAAGAGAGAAAAAGAAAAAGTCTGACAGAGTCTGTTATATTTTGGATGGCGACCTGTGGTATTTCAAGGATCGGATAATCAGGTTGCCTATCCCGGATTTATTTGCGTTGGAGCAAGAGTCCAATTGATGTTCTTACCGAAGCTGGGAGTTCAATCATATAAGTTAGTTCCATTCTAACTTAATCCTCAAGTATAGACTAGATAAATGGTTTAAGTCTATAGCAAAATAGTAGAGTTGAGTCATTCTATAGCTTCTGTTGTATTAATTAGCCACAAATTTGTAAACACCCATAAATATTTTGTAATAACATATCCTTCGGAGTCATGTTTAAATGTATGCAATGAGGATCCAAATTGTTAAACCTGTATCAAAAAA]

[+] EMBL CF319062             [GAGCTCCTCGAGCTCTCTCTCTCCTGTTATGTCTAGCCACCACCGGCCACTGCCGATCTCCCTCACCGGAGTGTTTCTGGCCAAGCCCTTGCGCCATCGGGTTTGCCTCGACGAGGCGAACTCATTTTCCTAGTTTCCCCTTCCTTTCCCCTTCCGAAACCAACCATCACAGCCACCTCCTCTTGTTGCCGGAGCAAGCTCTTGCCTTCGCCGTTCCGGTCTCCTCCCTAACCCTCTCTACCGGAAACCACCCTCCCTGAGTGCGCGTTGCTCGGGAACGCGTGTTGCCGCCGGCGTCACAGTCTTCTATCCACCGGAGAGCCGGCGCCCCTCCTCTCCCTTCTCTCTGTTTGTTCGTGGAGAAAGAGAGAAGAAGCAGGAAAGAAGAAGAAGAAGAAAAAGAGAGAAAAAGAAAAAGTCTGACAGAGTCTGTTATATTTTGGATGGCGACCTGTGGTATTTCAAGGATCGGATAATCAGGTTGCCTATCCCGGATTTATTTGCGTTGGAGCAAGAGTCCAATTGATGTTCTTACCGAAGCTGGGAGTTCAATCATATAAGTTAGTTCCATTCTAACTT                                                                                                                                                                                                   ]
[+] EMBL CF317985             [  GCTCCTCGAGCTCTCTCTCTCCTGTTATGTCTAGCCACCACCGGCCACTGCCGATCTCCCTCACCGGAGTGTTTCTGGCCAAGCCCTTGCGCCATCGGGTTTGCCTCGACGAGGCGAACTCATTTTCCTAGTTTCCCCTTCCTTTCCCCTTCCGAAACCAACCATCACAGCCACCTCCTCTTGTTGCCGGAGCAAGCTCTTGCCTTCGCCGTTCCGGTCTCCTCCCTAACCCTCTCTACCGGAAACCACCCTCCCTGAGTGCGCGTTGCTCGGGAACGCGTGTTGCCGCCGGCGTCACAGTCTTCTATCCACCGGAGAGCCGGCGCCCCTCCTCTCCCTTCTCTCTGTTTGTTCGTGGAGAAAGAGAGAAGAAGCAGGAAAGAAGAAGAAGAAGAAAAAGAGAGAAAAAGAAAAAGTCTGACAGAGTCTGTTATATTTTGGATGGCAACCTGTGGTATTTCAAGGATCGGATAATCAGGTTGCCTATCTCGGATTTATTTGCGTTAGAGCAAGAGTCCAATTGATGTTCTTACCGAAGCTGGGga                                                                                                                                                                                                                                   ]
[+] EMBL CF318279             [        CGAGCTCTCTCCCTCCTGTTATGTCTAGCCACCACCGGCCACTGCCGATCTCCCTCACCGGAGTGTTTCTGGCCAAGCCCTTGCGCCATCGGGTTTGCCTCGACGAGGCGAACTCATTTTCCTAGTTTCCCCTTCCTTTCTTTTTCCGAAACCAACCATCACAGCCACCTCCTCTTGTTGCCGGAGCAAGCTCTTGCCTTCGCCGTTCCGGTCTCCTCCCTAACCCTCTCTACCGGAAACCACCCTCCCTGAGTGCGCGTTGCTCGGGAACGCGTGTTGCCGCCGGCGTCACAGTCTTCTATCCACCGGAGAGCCGGCGCCCCTCCTCTCCCTTCTCTCTGTTTGTTCGTGGA                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF317463             [           GCTCTCTCTCTCCTGTTATGTCTAGCCACCACCGGCCACTGCCGATCTCCCTCACCGGAGTGTTTCTGGCCAAGCCCTTGCGCCATCGGGTTTGCCTCGACGAGGCGAACTCATTTTCCTAGTTTCCCCTTCCTTTCCCCTTCCGAAACCAACCATCACAGCCACCTCCTCTTGTTGCCGGAGCAAGCTCTTGCCTTCGCCGTTCCGGTCTCCTCCCTAACCCTCTCTACCGGAAACCACCCTCCCTGAGTGCGCGTTGCTCGGGAACGCGTGTTGCCGCCGGCGTCACAGTCTTCTATCCACCGGAGAGCCGGCGCCCCTCCTCTCCCTTCTCTCTGTTTGTTCGTGGAGAAAGAGAGAAGAAGCAGGAAAGAAGAAAAAAAA                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CF319063             [                                                                                                                                                                                                                                                                        GCGTTGCTCGGGAACGCGTGTTGCCGCCGGCGTCACAGTCTTCTATCCACCGGAGAGCCGGCGCCCCTCCTCTCCCTTCTCTCTGTTTGTTCGTGGAGAAAGAGAGAAGAAGCAGGAAAGAAGAAGAAGAAGAAAAAGAGAGAAAAAGAAAAAGTCTGACAGAGTCTGTTATATTTTGGATGGCGACCTGTGGTATTTCAAGGATCGGATAATCAGGTTGCCTATCCCGGATTTATTTGCGTTGGAGCAAGAGTCCAATTGATGTTCTTACCGAAGCTGGGAGTTCAATCATATAAGTTAGTTCCATTCTAACTTAATCCTCAAGTATAGACTAGATAAATGGTTTAAGTCTATAGCAAAATAGTAGAGTTGAGTCATTCTATAGCTTCTGTTGTATTAATTAGCCACAAATTTGTAAACACCCATAAATATTTTGTAATAACATATCCTTCGGAGTCATGTTTAAATGTATGCAATGAGGATCCAAATTGTTAAACCTGTATCAAAAAA]




>consensus_11328#0
GAGCTCCTCGAGCTCTCTCTCTCCTGTTATGTCTAGCCACCACCGGCCACTGCCGATCTC
CCTCACCGGAGTGTTTCTGGCCAAGCCCTTGCGCCATCGGGTTTGCCTCGACGAGGCGAA
CTCATTTTCCTAGTTTCCCCTTCCTTTCCCCTTCCGAAACCAACCATCACAGCCACCTCC
TCTTGTTGCCGGAGCAAGCTCTTGCCTTCGCCGTTCCGGTCTCCTCCCTAACCCTCTCTA
CCGGAAACCACCCTCCCTGAGTGCGCGTTGCTCGGGAACGCGTGTTGCCGCCGGCGTCAC
AGTCTTCTATCCACCGGAGAGCCGGCGCCCCTCCTCTCCCTTCTCTCTGTTTGTTCGTGG
AGAAAGAGAGAAGAAGCAGGAAAGAAGAAGAAGAAGAAAAAGAGAGAAAAAGAAAAAGTC
TGACAGAGTCTGTTATATTTTGGATGGCGACCTGTGGTATTTCAAGGATCGGATAATCAG
GTTGCCTATCCCGGATTTATTTGCGTTGGAGCAAGAGTCCAATTGATGTTCTTACCGAAG
CTGGGAGTTCAATCATATAAGTTAGTTCCATTCTAACTTAATCCTCAAGTATAGACTAGA
TAAATGGTTTAAGTCTATAGCAAAATAGTAGAGTTGAGTCATTCTATAGCTTCTGTTGTA
TTAATTAGCCACAAATTTGTAAACACCCATAAATATTTTGTAATAACATATCCTTCGGAG
TCATGTTTAAATGTATGCAATGAGGATCCAAATTGTTAAACCTGTATCAAAAAA

consensusID : consensus_11328#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 580
fasta sequence

                              [CCGAGCTCCTCGAGCTCTCTCTCTCCTGTTATGTCTAGCCACCACCGGCCACTGCCGATCTCCCTCACCGGAGTGTTTCTGGCCAAGCCCTTGCGCCATCGGGTTTGCCTCGACGAGGCGAACTCATTTTCCTAGTTTCCCCTTCCTTTTCCCTTCCGAAACCAACCATCACAGCCACCTCCTCTTGTTGCCGGAGCAAGCTCTTGCCTTCGCCGTTCCGGTCTCCTCCCTAACCCTCTCTACCGGAAACCACCCTCCCTGAGTGCGCGTTGCTCGGGAACGCGTGTTGCCGCCGGCGTCACAGTCTTCTATCCACCGGAGAGCCGGCGCCCCTCCTCTCCCTTCTCTCTGTTTGTTCGTGGAGAAAGAGAGAAGAAGCAGGAAAGAAGAAGAAGAAGAAAAAGAGAGAAAAAGAAAAAGTCTGACAGAGTCTGTTATATTTTGGATGGCAACCTGTGGTATTTCAAGGATCGGATAATCAGGTTGCCTATCTCGGATTTATTTGCGTTGGAGTAAGGTACTGCGCTTACCTGGTGGTGTTCCAACCGGATCTCCTCCCCGACTACAGTGAGAATGCGGA]

[+] EMBL CF321779             [CCGAGCTCCTCGAGCTCTCTCTCTCCTGTTATGTCTAGCCACCACCGGCCACTGCCGATCTCCCTCACCGGAGTGTTTCTGGCCAAGCCCTTGCGCCATCGGGTTTGCCTCGACGAGGCGAACTCATTTTCCTAGTTTCCCCTTCCTTTTCCCTTCCGAAACCAACCATCACAGCCACCTCCTCTTGTTGCCGGAGCAAGCTCTTGCCTTCGCCGTTCCGGTCTCCTCCCTAACCCTCTCTACCGGAAACCACCCTCCCTGAGTGCGCGTTGCTCGGGAACGCGTGTTGCCGCCGGCGTCACAGTCTTCTATCCACCGGAGAGCCGGCGCCCCTCCTCTCCCTTCTCTCTGTTTGTTCGTGGAGAAAGAGAGAAGAAGCAGGAAAGAAGAAGAAGAAGAAAAAGAGAGAAAAAGAAAAAGTCTGACAGAGTCTGTTATATTTTGGATGGCAACCTGTGGTATTTCAAGGATCGGATAATCAGGTTGCCTATCTCGGATTTATTTGCGTTGGAGTAAGGTACTGCGCTTACCTGGTGGTGTTCCAACCGGATCTCCTCCCCGACTACAGTGAGAATGCGGA]




>consensus_11328#1
CCGAGCTCCTCGAGCTCTCTCTCTCCTGTTATGTCTAGCCACCACCGGCCACTGCCGATC
TCCCTCACCGGAGTGTTTCTGGCCAAGCCCTTGCGCCATCGGGTTTGCCTCGACGAGGCG
AACTCATTTTCCTAGTTTCCCCTTCCTTTTCCCTTCCGAAACCAACCATCACAGCCACCT
CCTCTTGTTGCCGGAGCAAGCTCTTGCCTTCGCCGTTCCGGTCTCCTCCCTAACCCTCTC
TACCGGAAACCACCCTCCCTGAGTGCGCGTTGCTCGGGAACGCGTGTTGCCGCCGGCGTC
ACAGTCTTCTATCCACCGGAGAGCCGGCGCCCCTCCTCTCCCTTCTCTCTGTTTGTTCGT
GGAGAAAGAGAGAAGAAGCAGGAAAGAAGAAGAAGAAGAAAAAGAGAGAAAAAGAAAAAG
TCTGACAGAGTCTGTTATATTTTGGATGGCAACCTGTGGTATTTCAAGGATCGGATAATC
AGGTTGCCTATCTCGGATTTATTTGCGTTGGAGTAAGGTACTGCGCTTACCTGGTGGTGT
TCCAACCGGATCTCCTCCCCGACTACAGTGAGAATGCGGA

consensusID : consensus_11328#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 553
fasta sequence

                              [AGGACACTGACATGGACTGAGGAGTAGAAAACAACCGAGCCGTGAGCTCAGTCTCTCTCTCTCTCTCTTCTCATGTCAAACCACCACCGGCCATCGTCGATCTCCCTCACTGGAGTGTTTCTGGCCAAGCCCTTGCGCCATCGGGTTTGCCTCGACGAGGCGAACTCATTTTCCTAGTTTACCCTTCCTTTTCCCTTCCGAAACCAACCATCATAGCCACCTCCTTTGTTGCCGGAGCAAGCTCTTGCCGTCGCCGTTCCGGTCTCCTCCCTAACCTTCTCTATCGGCAACCACCCTCCCTAAGTGCGCGTTGCTCGGGAACGCGTTTTGCCGCCAGAGTCACAGTCTTCCATCCACCGGAGAGCCGGCGCCCCTTCTCTCCCTCCTCTCAACTCACTCGGCAACAGAAAAGAAGAAGAGAACGGGAGGAAGAAGAAGGAAGAAGAAAGAGAGAAGAAAAAAAGAAAAGGGAACTGACAGAGTCCATTTGGAGTTCTTATCGAAGCCGGGAGTTCAATCACATAAGTTAGTTCACTTTAAACCTAGTCTTGAA]

[+] EMBL CF321662             [AGGACACTGACATGGACTGAGGAGTAGAAAACAACCGAGCCGTGAGCTCAGTCTCTCTCTCTCTCTCTTCTCATGTCAAACCACCACCGGCCATCGTCGATCTCCCTCACTGGAGTGTTTCTGGCCAAGCCCTTGCGCCATCGGGTTTGCCTCGACGAGGCGAACTCATTTTCCTAGTTTACCCTTCCTTTTCCCTTCCGAAACCAACCATCATAGCCACCTCCTTTGTTGCCGGAGCAAGCTCTTGCCGTCGCCGTTCCGGTCTCCTCCCTAACCTTCTCTATCGGCAACCACCCTCCCTAAGTGCGCGTTGCTCGGGAACGCGTTTTGCCGCCAGAGTCACAGTCTTCCATCCACCGGAGAGCCGGCGCCCCTTCTCTCCCTCCTCTCAACTCACTCGGCAACAGAAAAGAAGAAGAGAACGGGAGGAAGAAGAAGGAAGAAGAAAGAGAGAAGAAAAAAAGAAAAGGGAACTGACAGAGTCCATTTGGAGTTCTTATCGAAGCCGGGAGTTCAATCACATAAGTTAGTTCACTTTAAACCTAGTCTTGAA]




>consensus_11328#2
AGGACACTGACATGGACTGAGGAGTAGAAAACAACCGAGCCGTGAGCTCAGTCTCTCTCT
CTCTCTCTTCTCATGTCAAACCACCACCGGCCATCGTCGATCTCCCTCACTGGAGTGTTT
CTGGCCAAGCCCTTGCGCCATCGGGTTTGCCTCGACGAGGCGAACTCATTTTCCTAGTTT
ACCCTTCCTTTTCCCTTCCGAAACCAACCATCATAGCCACCTCCTTTGTTGCCGGAGCAA
GCTCTTGCCGTCGCCGTTCCGGTCTCCTCCCTAACCTTCTCTATCGGCAACCACCCTCCC
TAAGTGCGCGTTGCTCGGGAACGCGTTTTGCCGCCAGAGTCACAGTCTTCCATCCACCGG
AGAGCCGGCGCCCCTTCTCTCCCTCCTCTCAACTCACTCGGCAACAGAAAAGAAGAAGAG
AACGGGAGGAAGAAGAAGGAAGAAGAAAGAGAGAAGAAAAAAAGAAAAGGGAACTGACAG
AGTCCATTTGGAGTTCTTATCGAAGCCGGGAGTTCAATCACATAAGTTAGTTCACTTTAA
ACCTAGTCTTGAA

consensusID : consensus_11328#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 384
fasta sequence

                              [GGAGAAAGAGAGAAGAAGCAGGAAAGAAGAAGAAGAAGAAAAAGAGAGAAAAAGAAAAAGTCTGACAGAGTCTGTTATATTTTGGATGGCAACCTGTGGTATTTCAAGGATCGGATAATCAGGTTGCCTATCTCGGATTTATTTGCGTTAGAGCAAGAGTCCAATTGATGTTCTTACCGAAGCTGGGAGTTCAATCATATAAGTTAGTTCCATTCTAACTTAATCCTCAAGTATAGACTAGATAAATGGTTTAAGTCTATAGCAAAATAGTAGAGTTGAGTCATTCTATAGCTTCTGTTGTATTAATTAGCCACAAATTTGTAAACACCCATAAATATTTTGTAATAACATATCCTTCGGAGTCAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF337446             [GGAGAAAGAGAGAAGAAGCAGGAAAGAAGAAGAAGAAGAAAAAGAGAGAAAAAGAAAAAGTCTGACAGAGTCTGTTATATTTTGGATGGCAACCTGTGGTATTTCAAGGATCGGATAATCAGGTTGCCTATCTCGGATTTATTTGCGTTAGAGCAAGAGTCCAATTGATGTTCTTACCGAAGCTGGGAGTTCAATCATATAAGTTAGTTCCATTCTAACTTAATCCTCAAGTATAGACTAGATAAATGGTTTAAGTCTATAGCAAAATAGTAGAGTTGAGTCATTCTATAGCTTCTGTTGTATTAATTAGCCACAAATTTGTAAACACCCATAAATATTTTGTAATAACATATCCTTCGGAGTCAAAAAAAAAAAAAAAAAAAA]




>consensus_11328#3
GGAGAAAGAGAGAAGAAGCAGGAAAGAAGAAGAAGAAGAAAAAGAGAGAAAAAGAAAAAG
TCTGACAGAGTCTGTTATATTTTGGATGGCAACCTGTGGTATTTCAAGGATCGGATAATC
AGGTTGCCTATCTCGGATTTATTTGCGTTAGAGCAAGAGTCCAATTGATGTTCTTACCGA
AGCTGGGAGTTCAATCATATAAGTTAGTTCCATTCTAACTTAATCCTCAAGTATAGACTA
GATAAATGGTTTAAGTCTATAGCAAAATAGTAGAGTTGAGTCATTCTATAGCTTCTGTTG
TATTAATTAGCCACAAATTTGTAAACACCCATAAATATTTTGTAATAACATATCCTTCGG
AGTCAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11328#0      GAGCTCCTCGAGCTCTCTCTCTCCTGTTATGTCTAGCCACCACCGGCCACTGCCGATCTC 60
consensus_11328#3      ------------------------------------------------------------
consensus_11328#1      ------------------------------------------------------------
consensus_11328#2      ------------------------------------------------------------
                                                                                   

consensus_11328#0      CCTCACCGGAGTGTTTCTGGCCAAGCCCTTGCGCCATCGGGTTTGCCTCGACGAGGCGAA 120
consensus_11328#3      ------------------------------------------------------------
consensus_11328#1      ------------------------------------------------------------
consensus_11328#2      ------------------------------------------------------------
                                                                                   

consensus_11328#0      CTCATTTTCCTAGTTTCCCCTTCCTTTCCCCTTCCGAAACCAACCATCACAGCCACCTCC 180
consensus_11328#3      ------------------------------------------------------------
consensus_11328#1      ------------------------------------------------------------
consensus_11328#2      ------------------------------------------------------------
                                                                                   

consensus_11328#0      TCTTGTTGCCGGAGCAAGCTCTTGCCTTCGCCGTTCCGGTCTCCTCCCTAACCCTCTCTA 240
consensus_11328#3      ------------------------------------------------------------
consensus_11328#1      ------------------------------------------------------------
consensus_11328#2      ------------------------------------------------------------
                                                                                   

consensus_11328#0      CCGGAAACCACCCTCCCTGAGTGCGCGTTGCTCGGGAACGCGTGTTGCCGCCGGCGTCAC 300
consensus_11328#3      ------------------------------------------------------------
consensus_11328#1      ------------------------------------------------------------
consensus_11328#2      ------------------------------AGGACACTGACATGGACTGAGGAGTAGAAA 30
                                                                                   

consensus_11328#0      AGTCTTCTATCCACCGGAGAGCCGGCGCCCCTCCTCTCCCTTCTCTCTGTTTGTTCGTGG 360
consensus_11328#3      ----------------------------------------------------------GG 2
consensus_11328#1      -----------CCGAGCTCC-TCGAGCTCTCTCTCTCCTGTTATGTCTAGCCACCACCGG 48
consensus_11328#2      ACAACCGAGCCGTGAGCTCAGTCTCTCTCTCTCTCTCTTCTCATGTCAAACCACCACCGG 90
                                                                                 **

consensus_11328#0      AGAAAGA-GAGAAGAAGCAGGAAAGAAGAAGAAGAAGAAAAAGAGAGAAAAAGAAAAAGT 419
consensus_11328#3      AGAAAGA-GAGAAGAAGCAGGAAAGAAGAAGAAGAAGAAAAAGAGAGAAAAAGAAAAAGT 61
consensus_11328#1      CCACTGCCGATCTCCCTCACCGGAGTGTTTCTGGCCAAGCCCTTGCGCCATCGGGTTTGC 108
consensus_11328#2      CCATCGTCGATCTCCCTCACTGGAGTGTTTCTGGCCAAGCCCTTGCGCCATCGGGTTTGC 150
                         *  *  **       **    **        *   *      * *  *  *     * 

consensus_11328#0      CTGACAGAGTCTGTTATATTTTGGATGGCGACCTGTGGTATTTCAAGGATCGGATAATCA 479
consensus_11328#3      CTGACAGAGTCTGTTATATTTTGGATGGCAACCTGTGGTATTTCAAGGATCGGATAATCA 121
consensus_11328#1      CTCGACGAGGCGAACTCATTTTCCTAGTTTCCCCTTCCTTTTCCCTTCCGAAACCAACCA 168
consensus_11328#2      CTCGACGAGGCGAACTCATTTTCCTAGTTTACCCTTCCTTTTCCCTTCCGAAACCAACCA 210
                       **    *** *      *****    *    **  *  * ** *           ** **

consensus_11328#0      GGTTGCCTATCCCGGATTTATTTGCGTTGGAGCAAGAGTCCA--ATTGATGTTCTTACCG 537
consensus_11328#3      GGTTGCCTATCTCGGATTTATTTGCGTTAGAGCAAGAGTCCA--ATTGATGTTCTTACCG 179
consensus_11328#1      TCACAGCCACCTC----CTCTTGTTGCCGGAGCAAGCTCTTGCCTTCGCCGTTCCGGTCT 224
consensus_11328#2      TCATAGCCACCTC----CT-TTGTTGCCGGAGCAAGCTCTTGCCGTCGCCGTTCCGGTCT 265
                             * * * *     * **   *   *******         * *  ****    * 

consensus_11328#0      AAGCTGGGAGTTCAATCAT--ATAAGTTAGTTCCATTCTAACTTAATCCTCAAGTATAGA 595
consensus_11328#3      AAGCTGGGAGTTCAATCAT--ATAAGTTAGTTCCATTCTAACTTAATCCTCAAGTATAGA 237
consensus_11328#1      CCTCCCTAACCCTCTCTACCGGAAACCACCCTCCCTGAGTGCGCGTTGCTCGGGAACGCG 284
consensus_11328#2      CCTCCCTAACCTTCTCTATCGGCAACCACCCTCCCTAAGTGCGCGTTGCTCGGGAACGCG 325
                          *    *        *     **      *** *     *    * ***  * *    

consensus_11328#0      CTAGATAA--ATGGTTTAAGTCTATAGCAAAATAGTAGAGTTGAG--TCATTCTATAGCT 651
consensus_11328#3      CTAGATAA--ATGGTTTAAGTCTATAGCAAAATAGTAGAGTTGAG--TCATTCTATAGCT 293
consensus_11328#1      TGTTGCCGCCGGCGTCACAGTCTTCTATCCACCGG-AGAGCCGGCGCCCCTCCTCTCCCT 343
consensus_11328#2      TTTTGCCGCCAGAGTCACAGTCTTCCATCCACCGG-AGAGCCGGCGCCCCTTCTCTCCCT 384
                                    **   *****       *   * ****  *     * * ** *  **

consensus_11328#0      TCTGTTGTATTAATTAGCCACAAATTTGTAAACACCCATAAATATTTTGTAATAACATAT 711
consensus_11328#3      TCTGTTGTATTAATTAGCCACAAATTTGTAAACACCCATAAATATTTTGTAATAACATAT 353
consensus_11328#1      TCTCTCTGTTTGTTCGTGGA--GAAAGAGAGAAGAAGCAGGAAAG--AAGAAGAAGAAGA 399
consensus_11328#2      CCTCTCAACTCACTCGGCAACAGAAAAGAAGAAGAGAACGGGAGG--AAGAAGAAGGAAG 442
                        ** *    *   *     *   *     * *                  ** **     

consensus_11328#0      CCTTCGGAGTCATGTTTAAATGTATGCAATGAGGATCCAAATTGTTAAACCTGTATCAAA 771
consensus_11328#3      CCTTCGGAGTCAAAAAAAAAAAAAAAAAAAA----------------------------- 384
consensus_11328#1      AAAAGAGAGAAAAAGAAAAAGTCTGACAGAGTCTGTTATATTTTGGATGGCAACCT-GTG 458
consensus_11328#2      AAGAAAGAGAGAAGAAAAAAAGAAAAGGGAA-CTGACAGAGTCCATTTGGAGTTCTTATC 501
                             ***  *     ***                                        

consensus_11328#0      AAA--------------------------------------------------------- 774
consensus_11328#3      ------------------------------------------------------------
consensus_11328#1      GTATTTCAAGGATCGGATAATCAGGTT-GCCTATCTCGGATTTATTTGCGTTGGAGTAAG 517
consensus_11328#2      GAAGCCGGGAGTTCAATCACATAAGTTAGTTCACTTTAAACCTAGTC---TTGAA----- 553
                                                                                   

consensus_11328#0      ------------------------------------------------------------
consensus_11328#3      ------------------------------------------------------------
consensus_11328#1      GTACTGCGCTTACCTGGTGGTGTTCCAACCGGATCTCCTCCCCGACTACAGTGAGAATGC 577
consensus_11328#2      ------------------------------------------------------------
                                                                                   

consensus_11328#0      ---
consensus_11328#3      ---
consensus_11328#1      GGA 580
consensus_11328#2      ---