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Oryza sativa
cluster # 11353 cluster # 11353       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11353#0 length = 1945 sequences # 6  
consensus_11353#1 length = 698 sequences # 2  

consensusID : consensus_11353#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1945
fasta sequence
                              [TTCACTCACCCACCCACCCCCCACAATATCTTCCCCTCCTCCTCACCCACGCCCACGCGACCTCGTCGAACACCTTGTCGCCGTCGCCGTCGCCGTCGCCTCACCGGCGCCCCACCAACCCCCAACCCCCCGCGCGGGCGGCGGCGGCGCCTATGACCGGAGCCTGCGAGGCGGCGCCGGCGCGGCGGCGGGGGCTGACGGTGCTCCCCCTCGTCGCGCTCATCTTCTACGACGTGTCGGGGGGCCCCTTCGGCATCGAGGACTCGGTCCGCGCCGGCGGCGGCGCGC-TCCTCCCGATCCTGGGGTTCCTCGTCCTCCCCGTGCTCTGGTCCCTCCCCGAGGCGCTCGTCACCGCCGAGCTCGCCTCCGCGTTCCCCACCAACGCCGGCTACGTCGCCTGGGTCTCCGCCGCGTTCGGCCCCGCCGCGGCGTTCCTCGTCGGGTTCTCCAAGTGGGCGTCGGGGACGCTCGACAACGCGCTCTACCCGGTGCTCTTCCTCGACTACCTCCGCTCCGGCGGGGGGCTCGTGCTCTCCCCGCCGGCCCGCTCCCTCGCCGTGCTCGCGCTCACCGCCGCGCTCACCTACCTCAACTTCCGGGGGCTCCACCTCG-TCGGCCTCTCCGCGCTGGCGCTCACCGCGTTCTCGCTCTCCCCGTTCGTCGCGCTCGCCGTGCTCGCCGCCCCCAAGATCCGCCCGTCGCGGTGGCTCGCCGTGAACGTGGCCGCCGTTGAGCCGCGCGCCTACTTCAACTCCATGTTCTGGAACCTCAACTACTGGGACAAGGCGAGCACGCTTGCCGGCGAGGTGGAGGAGCCGAGGAAGACGTTCCCGAAGGCGGTGTTCGGCGCGGTGGGGCTCGTCGTGGGCGCGTACCTCATCCCGCTCCTCGCCGGGACGGGCGCGCTGCCGTCGGAGACGGCGGGGGAGTGGACGGACGGGTTCTTCTCCGTGGTCGGCGACCGGATCGGCGGGCCGTGGCTGCGCGTGTGGATCCAGGCCGCCGCGGCCATGTCCAACATGGGGCTCTTCGAGGCCGAGATGAGCGGCGACTCGTTCCAGCTCCTCGGCATGGCGGAGATGGGCATGATCCCGGCGATCTTCGCGCGCAGGTCGCGCCACGGCACGCCGACGTACAGCATCCTCTGCTCGGCCACCGGCGTCGTCATCCTCTCCTTCATGAGCTTCCAGGAGATCGTCGAGTTCCTCAACTTCCTCTACGGCCTCGGGATGCTCGCCGTGTTCGCCGCCTTCGTCAAGCTCCGCGTCAAGGACCCCGACCTCCCCCGCCCGTACCGGATCCCCGTCGGCGCCGCGGGCGCCGCCGCCATGTGCGTCCCGCCCGTCGTCCTCATCACCACCGTCATGTGCCTCGCCTCCGCCAGGACGCTCGTCGTCAGCGCCGCCGTGGCCGTC-GCCGGCGTCGCCATGTACTACGGCGTCGAGCACATGAAGGCCACCGGCTGCGTCGAGTTCTTGACGCCGGTGCCGCCTGACAGCCTCCGTGGATCATCATCATCATCATCCTCATCGGCAGCGTCCGACAACGGCGGCGACGACGACGTCGAGGACGTCTGCGCCCTCCTCCTCGCCGCCGGCGAGCACGCCGGAGAAGGCGTCAGTGTCAGCAAGGAGAATTATTAGTGTACAGTGATTGGAATTTATTACAGTGGCTTCTCTTCAGTTTGAGTAAATATCTACAGAAAATGCAGAAGAATACAGTTTAGTTTTCTGAACTCCTGATGAGCTTTTGTCAGGAAAAAAAAACTGTTGTCTTATGTGATCTGAATCCTGAAAACATGGGAGCAAATCTTGCACATGTCAAAGATTAATTTGCCCCCAAAGTGATAAATACAGTTTAGTTTATTAAGTACAGAGATATTCCTGTTTGTGTGATGCAGAATTGCAGAGTAGCAGATCAATCAGAAATGAATTGAGAGACATGG]

[+] EMBL AK099986             [TTCACTCACCCACCCACCCCCCACAATATCTTCCCCTCCTCCTCACCCACGCCCACGCGACCTCGTCGAACACCTTGTCGCCGTCGCCGTCGCCGTCGCCTCACCGGCGCCCCACCAACCCCCAACCCCCCGCGCGGGCGGCGGCGGCGCCTATGACCGGAGCCTGCGAGGCGGCGCCGGCGCGGCGGCGGGGGCTGACGGTGCTCCCCCTCGTCGCGCTCATCTTCTACGACGTGTCGGGGGGCCCCTTCGGCATCGAGGACTCGGTCCGCGCCGGCGGCGGCGCGC TCCTCCCGATCCTGGGGTTCCTCGTCCTCCCCGTGCTCTGGTCCCTCCCCGAGGCGCTCGTCACCGCCGAGCTCGCCTCCGCGTTCCCCACCAACGCCGGCTACGTCGCCTGGGTCTCCGCCGCGTTCGGCCCCGCCGCGGCGTTCCTCGTCGGGTTCTCCAAGTGGGCGTCGGGGACGCTCGACAAGGCGCTCTACCCGGTGCTCTTCCTCGACTACCTCCGCTCCGGCGGGGGGCTCGTGCTCTCCCCGCCGGCCCGCTCCCTCGCCGTGCTCGCGCTCACCGCCGCGCTCACCTACCTCAACTTCCGGGGGCTCCACCTCG TCGGCCTCTCCGCGCTGGCGCTCACCGCGTTCTCGCTCTCCCCGTTCGTCGCGCTCGCCGTGCTCGCCGCCCCCAAGATCCGCCCGTCGCGGTGGCTCGCCGTGAACGTGGCCGCCGTTGAGCCGCGCGCCTACTTCAACTCCATGTTCTGGAACCTCAACTACTGGGACAAGGCGAGCACGCTTGCCGGCGAGGTGGAGGAGCCGAGGAAGACGTTCCCGAAGGCGGTGTTCGGCGCGGTGGGGCTCGTCGTGGGCGCGTACCTCATCCCGCTCCTCGCCGGGACGGGCGCGCTGCCGTCGGAGACGGCGGGGGAGTGGACGGACGGGTTCTTCTCCGTGGTCGGCGACCGGATCGGCGGGCCGTGGCTGCGCGTGTGGATCCAGGCCGCCGCGGCCATGTCCAACATGGGGCTCTTCGAGGCCGAGATGAGCGGCGACTCGTTCCAGCTCCTCGGCATGGCGGAGATGGGCATGATCCCGGCGATCTTCGCGCGCAGGTCGCGCCACGGCACGCCGACGTACAGCATCCTCTGCTCGGCCACCGGCGTCGTCATCCTCTCCTTCATGAGCTTCCAGGAGATCGTCGAGTTCCTCAACTTCCTCTACGGCCTCGGGATGCTCGCCGTGTTCGCCGCCTTCGTCAAGCTCCGCGTCAAGGACCCCGACCTCCCCCGCCCGTACCGGATCCCCGTCGGCGCCGCGGGCGCCGCCGCCATGTGCGTCCCGCCCGTCGTCCTCATCACCACCGTCATGTGCCTCGCCTCCGCCAGGACGCTCGTCGTCAGCGCCGCCGTGGCCGTC GCCGGCGTCGCCATGTACTACGGCGTCGAGCACATGAAGGCCACCGGCTGCGTCGAGTTCTTGACGCCGGTGCCGCCTGACAGCCTCCGTGGATCATCATCATCATCATCCTCATCGGCAGCGTCCGACAACGGCGGCGACGACGACGTCGAGGACGTCTGCGCCCTCCTCCTCGCCGCCGGCGAGCACGCCGGAGAAGGCGTCAGTGTCAGCAAGGAGAATTATTAGTGTACAGTGATTGGAATTTATTACAGTGGCTTCTCTTCAGTTTGAGTAAATATCTACAGAAAATGCAGAAGAATACAGTTTAGTTTTCTGAACTCCTGATGAGCTTTTGTCAGGAAAAAAAAACTGTTGTCTTATGTGATCTGAATCCTGAAAACATGGGAGCAAATCTTGCACATGTCAAAGATTAATTTGCCCCCAAAGTGATAAATACAGTTTAGTTTATTAAGTACAGAGATATTCCTGTTTGTGTGATGCAGAATTGCAGAGTAGCAGATCAATCAGAAATGAATTGAGAGACATGG]
[+] EMBL OSR26072A            [                                                                                 CGTCGCCGTCGCCGTCGCCTCACCGGCGCCCCACCAACCCCCAACCCCCCGCGCGGGCGGCGGCGGCGCCTATAACCGGAGCCTGCAAGGCGGCGCCGACGCGGCGGCGGGGGCTGACGGTGCTCCCCCTCGTCGCGCTCATCTTCTACGACGTGTCGGGGGGCCCCTTCGGCATCGAGGACTCGGTCCGCGCCGGCGG GGCG GCTTCCTCCCGATCCTGGGGTTCCTCGTCCTCCCCGTGCTCTGGTCCCTCCCCGAGGCGCTCGTAACCGCCGAGCTCGCCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB647760             [                                                                                     GCCGTCGCCGTCGCCTCACCGGCGCCCCACCAACCCCCAACCCCCCGCGCGGGCGGCGGCGGCGCCTATGACCGGAGCCTGCGAGGCGGCGCCGGCGCGGCGGCGGGGGCTGACGGTGCTCCCCCTCGTCGCGCTCATCTTCTACAACATGTCTGGGGGCCCCTTCGGCATCGAGGACTCGGTCCGCGCCGGCGGCGGCGCGC TCCTCCCGATCCTGGGGTTCCTCGTCCTCCCCGTGCTCTGGTCCCTCCCCGAGGCACTCGTCACCGCCGAGCTCACCTCCGCGTTCCCCACCAACGCCGGGTACTTCACCTGGGTCTCCGCCGCGTTCGGCCCCGCCGCGGCGTTCCTCGTCGGGTTCTCCAAGTGGGCGTCTGGGACGCTCGACAACGCGCTCTAGCCTGTGCTCTTCCTCGACTACCTCCGCTCCGGCGGGGGGCTCGTGCTCTCCCCGCCGGCCCGGTCCCTCGCCGTGCTCGCGCTCACCGCCGGGCTCACCTACCTCAACTTCCGGGGGCTCCAGCTCGCTCAGGCTCTCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB645077             [                                                                                         TCGCCGTCGCCTCACCGGCGCCCCACCAACCCCCAACCCCCCGCGCGGGCGGCGGCGGCGCCTATGACCGGAGCCTGCGAGGCGGCGCCGGCGCGGCGGCGGGGGCTGACGGTGCTCCCCCTCGTCGCGCTCATCTTCTACGACGTGTCGGGGGGCCCCTTCGGCATCGAGGACTCGGTCCGCGCCGGCGGCGGCGCGC TCCTCCCGATCCTGGGGTTCCTCGTCCTCCCCGTGCTCTGGTCCCTCCCCGAGGCGCTCGTCACCGCCGAGCTCGCCTCCGCGTTCCCCACCAACGCCGGCTACGTCGCCTGGGTCTCCGCCGCGTTCGGCCCCGCCGCGGCGTTCCTCGTCGGGTTCTCCAAGTGGGCGTCGGGGACGCTCGACAACGCGCTCTACCCGGTGCTCTTCCTCGACTACCTCCGCTCCGGCGGGGGGCTCGTGCTCTCCCCGCCGGCCCGCTCCCTCGCCGTGCTCGCGCTCACCGCCGCGCTCACCTACCTCAACTTCCGGGGGCTCCACCTCG TCGGCCTCTCCGCGCTGGCGCTCACCGCGTTCTCGCTCTCCCCGTTCGTCGCGCTCGCCGTGCTCGCCGCCCCCAAGATCCGCCCGTCGCGGTGGCTCGCCGTGAACGTGGCCGCCGTTGAGCCGCGCGCCTACTTCAACTCCATGTTCTGGAACCTCAACTACTGGGACAAGGCGAGCACGCTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB645078             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTCATGAGCTTCCAGGAGATCGTCGAGTTCCTCAACTTCCTCTACGGCCTCGGGATGCTCGCCGTGTTCGCCGCCTTCGTCAAGCTCCGCGTCAAGGACCCCGACCTCCCCCGCCCGTACCGGATCCCCGTCGGCGCCGCGGGCGCCGCCACCATGTGCGTCCCGCCCGTCGTCCTCATCACCACCGTCATGTGCCTCGCCTCCGCCAGGACGCTCGTCGTCAGCGCCGCCGTGGCCGTC GCCGGCGTCGCCATGTACTACGGCGTCGAGCACATGAAGGCCACCGGCTGCGTCGAGTTCTTGACGCCGGTGCCGCCTGACAGCCTCCGTGGATCATCATCATCATCATCCTCATCGGCAGCGTCCGACAACGGCGGCGACGACGACGTCGAGGACGTTTGCGCCCTCCTCCTCGCCGCCGGCGAGCACGCCGGAGAAGGCGTCAGTGTCAGGGAGGAGAATTATTAGTGTACAGTGATTGGAATTTATTACAGTGG                                                                                                                                                                                                                                                                                 ]
[+] EMBL BI801121             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTCGTCGTCAGCGCCGCCGTGGCCGTCGGCCGGCGTCGCCATGTACTACGGCGTCGAGCACATGAAGGCCACCGGCTGCGTCGAGTTCTTGACGCCGGTGCCGCCTGACAGCCTCCGTGGATCATCATCATCATCATCCTCATCGGCAGCGTCCGACAACGGCGGCGACGACGACGTCGAGGACGTCTGCGCCCTCCTCCTCGCCGCCGGCGAGCACGCCGGAGAAGGCGTCAGTGTCAGCAAGGAGAATTATTAGTGTACAGTGATTGGAATTTATTACAGTGGCTTCTCTTCAGTTTGAGTAAATATCTACAGAAAATGCAGAAGAATACAGTTTAGTTTTCTGAACTCCTGATGAGCTTTTGTCAGG AAAAAAAACTGTTGTCTTATGTGATCTGAATCCTGAAAACATGGGAGCAAATCTTGCACATGTCAAAGATTAATTTGCCCCCAAAGTGATAAATACAGTTTAGTTTATTAAGTACAGAGAaaaa                                                               ]


>consensus_11353#0 TTCACTCACCCACCCACCCCCCACAATATCTTCCCCTCCTCCTCACCCACGCCCACGCGA CCTCGTCGAACACCTTGTCGCCGTCGCCGTCGCCGTCGCCTCACCGGCGCCCCACCAACC CCCAACCCCCCGCGCGGGCGGCGGCGGCGCCTATGACCGGAGCCTGCGAGGCGGCGCCGG CGCGGCGGCGGGGGCTGACGGTGCTCCCCCTCGTCGCGCTCATCTTCTACGACGTGTCGG GGGGCCCCTTCGGCATCGAGGACTCGGTCCGCGCCGGCGGCGGCGCGCTCCTCCCGATCC TGGGGTTCCTCGTCCTCCCCGTGCTCTGGTCCCTCCCCGAGGCGCTCGTCACCGCCGAGC TCGCCTCCGCGTTCCCCACCAACGCCGGCTACGTCGCCTGGGTCTCCGCCGCGTTCGGCC CCGCCGCGGCGTTCCTCGTCGGGTTCTCCAAGTGGGCGTCGGGGACGCTCGACAACGCGC TCTACCCGGTGCTCTTCCTCGACTACCTCCGCTCCGGCGGGGGGCTCGTGCTCTCCCCGC CGGCCCGCTCCCTCGCCGTGCTCGCGCTCACCGCCGCGCTCACCTACCTCAACTTCCGGG GGCTCCACCTCGTCGGCCTCTCCGCGCTGGCGCTCACCGCGTTCTCGCTCTCCCCGTTCG TCGCGCTCGCCGTGCTCGCCGCCCCCAAGATCCGCCCGTCGCGGTGGCTCGCCGTGAACG TGGCCGCCGTTGAGCCGCGCGCCTACTTCAACTCCATGTTCTGGAACCTCAACTACTGGG ACAAGGCGAGCACGCTTGCCGGCGAGGTGGAGGAGCCGAGGAAGACGTTCCCGAAGGCGG TGTTCGGCGCGGTGGGGCTCGTCGTGGGCGCGTACCTCATCCCGCTCCTCGCCGGGACGG GCGCGCTGCCGTCGGAGACGGCGGGGGAGTGGACGGACGGGTTCTTCTCCGTGGTCGGCG ACCGGATCGGCGGGCCGTGGCTGCGCGTGTGGATCCAGGCCGCCGCGGCCATGTCCAACA TGGGGCTCTTCGAGGCCGAGATGAGCGGCGACTCGTTCCAGCTCCTCGGCATGGCGGAGA TGGGCATGATCCCGGCGATCTTCGCGCGCAGGTCGCGCCACGGCACGCCGACGTACAGCA TCCTCTGCTCGGCCACCGGCGTCGTCATCCTCTCCTTCATGAGCTTCCAGGAGATCGTCG AGTTCCTCAACTTCCTCTACGGCCTCGGGATGCTCGCCGTGTTCGCCGCCTTCGTCAAGC TCCGCGTCAAGGACCCCGACCTCCCCCGCCCGTACCGGATCCCCGTCGGCGCCGCGGGCG CCGCCGCCATGTGCGTCCCGCCCGTCGTCCTCATCACCACCGTCATGTGCCTCGCCTCCG CCAGGACGCTCGTCGTCAGCGCCGCCGTGGCCGTCGCCGGCGTCGCCATGTACTACGGCG TCGAGCACATGAAGGCCACCGGCTGCGTCGAGTTCTTGACGCCGGTGCCGCCTGACAGCC TCCGTGGATCATCATCATCATCATCCTCATCGGCAGCGTCCGACAACGGCGGCGACGACG ACGTCGAGGACGTCTGCGCCCTCCTCCTCGCCGCCGGCGAGCACGCCGGAGAAGGCGTCA GTGTCAGCAAGGAGAATTATTAGTGTACAGTGATTGGAATTTATTACAGTGGCTTCTCTT CAGTTTGAGTAAATATCTACAGAAAATGCAGAAGAATACAGTTTAGTTTTCTGAACTCCT GATGAGCTTTTGTCAGGAAAAAAAAACTGTTGTCTTATGTGATCTGAATCCTGAAAACAT GGGAGCAAATCTTGCACATGTCAAAGATTAATTTGCCCCCAAAGTGATAAATACAGTTTA GTTTATTAAGTACAGAGATATTCCTGTTTGTGTGATGCAGAATTGCAGAGTAGCAGATCA ATCAGAAATGAATTGAGAGACATGG



consensusID : consensus_11353#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 698
fasta sequence
                              [CTTCCAGGAGATCGTCGAGTTCCTCAACTTCCTCTACGGCCTCGGGATGCTCGCCGTGTTCGCCGCCTTCGTCAAGCTCCGCGTCAAGGACCCCGACCTCCCCCGCCCGTACCGGATCCCCGTCGGCGCCGCGGGCGCCGCCGCCATGTGCGTCCCGCCCGTCGTCCTCATCACCACCGTCATGTGCCTCGCCTCCGCCAGGACGCTCGTCGTCAGCGCCGCCGTGGCCGTCGCCGGCGTCGCCATGTACTACGGCGTCGAGCACATGAAGGCCACCGGCTGCGTCGAGTTCTTGACGCCGGTGCCGCCTGACAGCCTCCGTGGATCATCATCATCATCATCCTCATCGGCAGCGTCCGACAACGGCGGCGACGACGACGTCGAGGACGTTTGCGCCCTCCTCCTCGCCGCCGGCGAGCACGCCGGAGAAGGCGTCAGTGTCAGCAAGGAGAATTATTAGTGTACAGTGATTGGAATTTATTACAGTGGCTTCTCTTCAGTTTGAGTAAATATCTACAGAAAATGCAGAAGAATACAGTTTAGTTTTCTGAACTCCTGATGAGCTTTTGTCAGGAAAAAAAACTGTTGTCTTATGTGATCTGAATCCTGAAAACATGGGAGCAAATCTTGCACATGTCAAAGATTAATTTGCCCCCAAAGTGATAAATACAGTTTAGTTTATTAAAAAAAAAAAAGAA]

[-] EMBL CB648410             [CTTCCAGGAGATCGTCGAGTTCCTCAACTTCCTCTACGGCCTCGGGATGCTCGCCGTGTTCGCCGCCTTCGTCAAGCTCCGCGTCAAGGACCCCGACCTCCCCCGCCCGTACCGGATCCCCGTCGGCGCCGCGGGCGCCGCCGCCATGTGCGTCCCGCCCGTCGTCCTCATCACCACCGTCATGTGCCTCGCCTCCGCCAGGACGCTCGTCGTCAGCGCCGCCGTGGCCGTCGCCGGCGTCGCCATGTACTACGGCGTCGAGCACATGAAGGCCACCGGCTGCGTCGAGTTCTTGACGCCGGTGCCGCCTGACAGCCTCCGTGGATCATCATCATCATCATCCTCATCGGCAGCGTCCGACAACGGCGGCGACGACGACGTCGAGGACGTTTGCGCCCTCCTCCTCGCCGCCGGCGAGCACGCCGGAGAAGGCGTCAGTGTCAGCAAGGAGAATTATTAGTGTACAGTGATTGGAATTTATTACAGTGGCTTCTCTTCAGTTTGAGTAAATATCTACAGAAAATGCAGAAGAATACAGTTTAGTTTTCTGAACTCCTGATGAGCTTTTGTCAGGAAAAAAAACTGTTGTCTTATGTGATCTGAATCCTGAAAACATGGGAGCAAATCTTGCACATGTCAAAGATTAATTTGCCCCCAAAGTGATAAATACAGTTTAGTTTATTAAAAAAAAAAAAGAA]
[-] EMBL CB647761             [                                                        TGTTCGCCGCATTCGTCAAGCTCCGCGTCAAGGACCCCGTCCTCCCCCGCCTGTACCGGATCCCCGTCGGCGCCGCGGGCGCCGCCGCCATGTGCGTCCCGCCCGTGGTCCTCATCACCACCGTCATGTGCCTCGCCTCCGCCAGGACGATGGTGGTCAGCGCCGCCGTGGCCGTCGCCGGCGTGGCCATGTAGTACGGCGTCGAGCACATGAAGGCCACCGGCTGCGTCGAGTTCTTGACGCCGGTGCCGCCTGACAGCCTCCGTGGATCATCATCATCATCATCCTCATCGGCAGCGTCCGACAACGGCGGGGATGACGACGTGGAGGAGGTTTGCGCCCTCCTCCTCGCCGCCGGGGAGCACGCCGGAGAAGGCGTCAGTGTCAGCAAGGAGAATTATTAGTGTACAGTGATTGGAATTTATTACAGTGGCTTCTCTTCAGTTGGAGTAAATATCTACAGAAAATGCAGAAGAATCCAGTTTAGTTTTTTGAACTCCTGATGAGCTTTTGTCAGGAAAAAAAACTGTTGTCTTATGTGATGTGAATCCTGAAAACATGGGAGCAAATCTTGCACATGTCAAAGATTAATTTGCCCCCAAAGTGATAAATACAGTTTAt                     ]


>consensus_11353#1 CTTCCAGGAGATCGTCGAGTTCCTCAACTTCCTCTACGGCCTCGGGATGCTCGCCGTGTT CGCCGCCTTCGTCAAGCTCCGCGTCAAGGACCCCGACCTCCCCCGCCCGTACCGGATCCC CGTCGGCGCCGCGGGCGCCGCCGCCATGTGCGTCCCGCCCGTCGTCCTCATCACCACCGT CATGTGCCTCGCCTCCGCCAGGACGCTCGTCGTCAGCGCCGCCGTGGCCGTCGCCGGCGT CGCCATGTACTACGGCGTCGAGCACATGAAGGCCACCGGCTGCGTCGAGTTCTTGACGCC GGTGCCGCCTGACAGCCTCCGTGGATCATCATCATCATCATCCTCATCGGCAGCGTCCGA CAACGGCGGCGACGACGACGTCGAGGACGTTTGCGCCCTCCTCCTCGCCGCCGGCGAGCA CGCCGGAGAAGGCGTCAGTGTCAGCAAGGAGAATTATTAGTGTACAGTGATTGGAATTTA TTACAGTGGCTTCTCTTCAGTTTGAGTAAATATCTACAGAAAATGCAGAAGAATACAGTT TAGTTTTCTGAACTCCTGATGAGCTTTTGTCAGGAAAAAAAACTGTTGTCTTATGTGATC TGAATCCTGAAAACATGGGAGCAAATCTTGCACATGTCAAAGATTAATTTGCCCCCAAAG TGATAAATACAGTTTAGTTTATTAAAAAAAAAAAAGAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11353#0      TTCACTCACCCACCCACCCCCCACAATATCTTCCCCTCCTCCTCACCCACGCCCACGCGA 60
consensus_11353#1      ------------------------------------------------------------
                                                                                   

consensus_11353#0      CCTCGTCGAACACCTTGTCGCCGTCGCCGTCGCCGTCGCCTCACCGGCGCCCCACCAACC 120
consensus_11353#1      ------------------------------------------------------------
                                                                                   

consensus_11353#0      CCCAACCCCCCGCGCGGGCGGCGGCGGCGCCTATGACCGGAGCCTGCGAGGCGGCGCCGG 180
consensus_11353#1      ------------------------------------------------------------
                                                                                   

consensus_11353#0      CGCGGCGGCGGGGGCTGACGGTGCTCCCCCTCGTCGCGCTCATCTTCTACGACGTGTCGG 240
consensus_11353#1      ------------------------------------------------------------
                                                                                   

consensus_11353#0      GGGGCCCCTTCGGCATCGAGGACTCGGTCCGCGCCGGCGGCGGCGCGCTCCTCCCGATCC 300
consensus_11353#1      ------------------------------------------------------------
                                                                                   

consensus_11353#0      TGGGGTTCCTCGTCCTCCCCGTGCTCTGGTCCCTCCCCGAGGCGCTCGTCACCGCCGAGC 360
consensus_11353#1      ------------------------------------------------------------
                                                                                   

consensus_11353#0      TCGCCTCCGCGTTCCCCACCAACGCCGGCTACGTCGCCTGGGTCTCCGCCGCGTTCGGCC 420
consensus_11353#1      ------------------------------------------------------------
                                                                                   

consensus_11353#0      CCGCCGCGGCGTTCCTCGTCGGGTTCTCCAAGTGGGCGTCGGGGACGCTCGACAACGCGC 480
consensus_11353#1      ------------------------------------------------------------
                                                                                   

consensus_11353#0      TCTACCCGGTGCTCTTCCTCGACTACCTCCGCTCCGGCGGGGGGCTCGTGCTCTCCCCGC 540
consensus_11353#1      ------------------------------------------------------------
                                                                                   

consensus_11353#0      CGGCCCGCTCCCTCGCCGTGCTCGCGCTCACCGCCGCGCTCACCTACCTCAACTTCCGGG 600
consensus_11353#1      ------------------------------------------------------------
                                                                                   

consensus_11353#0      GGCTCCACCTCGTCGGCCTCTCCGCGCTGGCGCTCACCGCGTTCTCGCTCTCCCCGTTCG 660
consensus_11353#1      ------------------------------------------------------------
                                                                                   

consensus_11353#0      TCGCGCTCGCCGTGCTCGCCGCCCCCAAGATCCGCCCGTCGCGGTGGCTCGCCGTGAACG 720
consensus_11353#1      ------------------------------------------------------------
                                                                                   

consensus_11353#0      TGGCCGCCGTTGAGCCGCGCGCCTACTTCAACTCCATGTTCTGGAACCTCAACTACTGGG 780
consensus_11353#1      ------------------------------------------------------------
                                                                                   

consensus_11353#0      ACAAGGCGAGCACGCTTGCCGGCGAGGTGGAGGAGCCGAGGAAGACGTTCCCGAAGGCGG 840
consensus_11353#1      ------------------------------------------------------------
                                                                                   

consensus_11353#0      TGTTCGGCGCGGTGGGGCTCGTCGTGGGCGCGTACCTCATCCCGCTCCTCGCCGGGACGG 900
consensus_11353#1      ------------------------------------------------------------
                                                                                   

consensus_11353#0      GCGCGCTGCCGTCGGAGACGGCGGGGGAGTGGACGGACGGGTTCTTCTCCGTGGTCGGCG 960
consensus_11353#1      ------------------------------------------------------------
                                                                                   

consensus_11353#0      ACCGGATCGGCGGGCCGTGGCTGCGCGTGTGGATCCAGGCCGCCGCGGCCATGTCCAACA 1020
consensus_11353#1      ------------------------------------------------------------
                                                                                   

consensus_11353#0      TGGGGCTCTTCGAGGCCGAGATGAGCGGCGACTCGTTCCAGCTCCTCGGCATGGCGGAGA 1080
consensus_11353#1      ------------------------------------------------------------
                                                                                   

consensus_11353#0      TGGGCATGATCCCGGCGATCTTCGCGCGCAGGTCGCGCCACGGCACGCCGACGTACAGCA 1140
consensus_11353#1      ------------------------------------------------------------
                                                                                   

consensus_11353#0      TCCTCTGCTCGGCCACCGGCGTCGTCATCCTCTCCTTCATGAGCTTCCAGGAGATCGTCG 1200
consensus_11353#1      -------------------------------------------CTTCCAGGAGATCGTCG 17
                                                                  *****************

consensus_11353#0      AGTTCCTCAACTTCCTCTACGGCCTCGGGATGCTCGCCGTGTTCGCCGCCTTCGTCAAGC 1260
consensus_11353#1      AGTTCCTCAACTTCCTCTACGGCCTCGGGATGCTCGCCGTGTTCGCCGCCTTCGTCAAGC 77
                       ************************************************************

consensus_11353#0      TCCGCGTCAAGGACCCCGACCTCCCCCGCCCGTACCGGATCCCCGTCGGCGCCGCGGGCG 1320
consensus_11353#1      TCCGCGTCAAGGACCCCGACCTCCCCCGCCCGTACCGGATCCCCGTCGGCGCCGCGGGCG 137
                       ************************************************************

consensus_11353#0      CCGCCGCCATGTGCGTCCCGCCCGTCGTCCTCATCACCACCGTCATGTGCCTCGCCTCCG 1380
consensus_11353#1      CCGCCGCCATGTGCGTCCCGCCCGTCGTCCTCATCACCACCGTCATGTGCCTCGCCTCCG 197
                       ************************************************************

consensus_11353#0      CCAGGACGCTCGTCGTCAGCGCCGCCGTGGCCGTCGCCGGCGTCGCCATGTACTACGGCG 1440
consensus_11353#1      CCAGGACGCTCGTCGTCAGCGCCGCCGTGGCCGTCGCCGGCGTCGCCATGTACTACGGCG 257
                       ************************************************************

consensus_11353#0      TCGAGCACATGAAGGCCACCGGCTGCGTCGAGTTCTTGACGCCGGTGCCGCCTGACAGCC 1500
consensus_11353#1      TCGAGCACATGAAGGCCACCGGCTGCGTCGAGTTCTTGACGCCGGTGCCGCCTGACAGCC 317
                       ************************************************************

consensus_11353#0      TCCGTGGATCATCATCATCATCATCCTCATCGGCAGCGTCCGACAACGGCGGCGACGACG 1560
consensus_11353#1      TCCGTGGATCATCATCATCATCATCCTCATCGGCAGCGTCCGACAACGGCGGCGACGACG 377
                       ************************************************************

consensus_11353#0      ACGTCGAGGACGTCTGCGCCCTCCTCCTCGCCGCCGGCGAGCACGCCGGAGAAGGCGTCA 1620
consensus_11353#1      ACGTCGAGGACGTTTGCGCCCTCCTCCTCGCCGCCGGCGAGCACGCCGGAGAAGGCGTCA 437
                       ************* **********************************************

consensus_11353#0      GTGTCAGCAAGGAGAATTATTAGTGTACAGTGATTGGAATTTATTACAGTGGCTTCTCTT 1680
consensus_11353#1      GTGTCAGCAAGGAGAATTATTAGTGTACAGTGATTGGAATTTATTACAGTGGCTTCTCTT 497
                       ************************************************************

consensus_11353#0      CAGTTTGAGTAAATATCTACAGAAAATGCAGAAGAATACAGTTTAGTTTTCTGAACTCCT 1740
consensus_11353#1      CAGTTTGAGTAAATATCTACAGAAAATGCAGAAGAATACAGTTTAGTTTTCTGAACTCCT 557
                       ************************************************************

consensus_11353#0      GATGAGCTTTTGTCAGGAAAAAAAAACTGTTGTCTTATGTGATCTGAATCCTGAAAACAT 1800
consensus_11353#1      GATGAGCTTTTGTCAGGAAAAAAAA-CTGTTGTCTTATGTGATCTGAATCCTGAAAACAT 616
                       ************************* **********************************

consensus_11353#0      GGGAGCAAATCTTGCACATGTCAAAGATTAATTTGCCCCCAAAGTGATAAATACAGTTTA 1860
consensus_11353#1      GGGAGCAAATCTTGCACATGTCAAAGATTAATTTGCCCCCAAAGTGATAAATACAGTTTA 676
                       ************************************************************

consensus_11353#0      GTTTATTAAGTACAGAGATATTCCTGTTTGTGTGATGCAGAATTGCAGAGTAGCAGATCA 1920
consensus_11353#1      GTTTATTAAAAAAAAAAAAGAA-------------------------------------- 698
                       *********  * * * *                                          

consensus_11353#0      ATCAGAAATGAATTGAGAGACATGG 1945
consensus_11353#1      -------------------------
                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)