These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11357#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 719 fasta sequence [CGCTCCTCCTCCCTTTTCGGCCGCTGCTTCACACCATCCGCATCCTCCCCGCTCGCCGCCGCGCCGCTCCAAGTTTCTTTCGTGAGGAGTTGATCGAGGAGTTGGGGTTGAGATGGGCCAGATCCAGTACTCCGAGAAGTACTTCGACGACACCTACGAGTACAGGCACGTCGTCCTTCCGCCGGAGGTCGCCAAGCTCCTCCCCAAGAATCGCCTTCTCTCCGAGAACGAGTGGCGCGCGATCGGAGTGCAGCAGAGCCGCGGGTGGGTGCACTACGCG-ATCCACCGGCCGGAGCCGCACATCATGCTGTTCCGCCGCCCGCTCAACTTCCAGCAGCAGCAGGAGGCAGCCGCGGCTGCAGCGGCGCAGATGCTGCCCAAGTGACTG-CCCCC-TCCACGCGGCGATGGCGGCGACCCGGGGTTGAAATGTGCGAAACCCTAGCCCCTTTACATCTCTTAAAGGGGGTTCGCGATACTGCTAATTTACTTTCGTTTGTTAGTTGGAAATCTTAGTGATGTT-GGTGGTGTCCACCTTGTGTTCGTGAGAATGCCCGAGTAGGAACTGGCATGTAAACGTCTGTGTTATCTTGGATACTTTTCATTGCTAAGCTATTATATGTGATGCTGGTACTGTTGTTAAACTGTTACAACTTACTACTACTATATGGAAAAAAAAGATTGTGGTCATGCTTAGCCTTTAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF331569 [CGCTCCTCCTCCCTTTTCGGCCGCTGCTTCACACCATCCGCATCCTCCCCGCTCGCCGCCGCGCCGCTCCAAGTTTCTTTCGTGAGGAGTTGATCGAGGAGTTGGGGTTGAGATGGGCCAGATCCAGTACTCCGAGAAGTACTTCGACGACACCTACGAGTACAGGCACGTCGTCCTTCCGNCGGAGGTCGCCAAGCTCCTCCCCAAGAATCGCCTTCTCTCCGAGAACGAGTGGCGCGCGATCGGAGTGCAGCAGAGCCGCGGGTGGGTGCACTACGCG ATCCACCGGCCGGAGCCGCACATCATGCTGTTCCGCCGCCCGCTCAACTTCCAGCAGCAGCAGGAGGCAGCCGCGGCTGCAGCGGCGCAGATGCTGCCCAAGTGACTG CCCCC TCCACGCGGCGATGGCGGCGACCCGGGGTTGAAATGTGCGAAACCCTAGCCCCTTTACATCTCTTAAAGGGGGTTCGCGATACTGCTAATTTACTTTCGTTTGTTAGT ] [+] EMBL AK121395 [ CTCCTCCCTTTTCGGCCGCTGCTTCACACCATCCGCATCCTCCCCGCTCGCCGCCGCGCCGCTCCAAGTTTCTTTCGTGAGGAGTTGATCGAGGAGTTGGGGTTGAGATGGGCCAGATCCAGTACTCCGAGAAGTACTTCGACGACACCTACGAGTACAGGCACGTCGTCCTTCCGCCGGAGGTCGCCAAGCTCCTCCCCAAGAATCGCCTTCTCTCCGAGAACGAGTGGCGCGCGATCGGAGTGCAGCAGAGCCGCGGGTGGGTGCACTACGCG ATCCACCGGCCGGAGCCGCACATCATGCTGTTCCGCCGCCCGCTCAACTTCCAGCAGCAGCAGGAGGCAGCCGCGGCTGCAGCGGCGCAGATGCTGCCCAAGTGACTG CCCCC TCCACGCGGCGATGGCGGCGACCCGGGGTTGAAATGTGCGAAACCCTAGCCCCTTTACATCTCTTAAAGGGGGTTCGCGATACTGCTAATTTACTTTCGTTTGTTAGTTGGAAATCTTAGTGATGTT GGTGGTGTCCACCTTGTGTTCGTGAGAATGCCCGAGTAGGAACTGGCATGTAAACGTCTGTGTTATCTTGGATACTTTTCATTGCTAAGCTATTATATGTGATGCTGG ] [+] EMBL CF281335 [ CCTCCCTTTTCCGCCGCTGCTTCACACCATCCGCATCCTCCCCGCTCGCCGCCGCGCCGCTCCAAGTTTCTTTCGTGAGGAGTTGATCGAGGAGTTGGGGTTGAGATGGGCCAGATCCAGTACTCCGAGAAGTACTTTTTTTTTACCTACGAGTACAGGCACGTCGTCCTTCCGCCGGAGGTCTTTTTTCTCCTCCCCAAGAATCGCCTTCTCTCCGAGAACGAGTGGCGCGTGATCGGAGTGCAGCAGAGCCGCGGGTGGGTGCACTACGCG ATCCACCGGCCGGAGCCGCACATCATGCTGTTCCGCCGCCCGCTCAACTTCCAGCAGCAGCAGGAGGCAGCCGCGGCTGCAGCGGCGCAGATGCTGCCCAAGTGACTG CCCCC TCCACGCGGCGATGGCGGCGACCCGGGGTTGAAATGTGCGAAACCCTAGCCCCTTTACATCTCTTAAAGGGGGTTCGCGATACTGCTAATTTACTTTCGTTTGTTAGTTGGAAATCTTAGTGATGTTGGGTGGTGTCCACCTTGTGTTCGTGAGAATGCCCGAGTAGGAACTGGCATGTAAACGTCTGTGTTATCTTGGATACTTTTCATTGCTAAGCTATT ] [+] EMBL AU031496 [ TCGGCCGCTGCTTCACACCATCCGCATCCTCCCCGCTCGCCGCCGCGCCGCTCCAAGTTTCTTTCGTGAGGAGTTGATCGAGGAGTTGGGGTTGAGATGGGCCAGATCCAGTACTCCGAGAAGTACTTCGACGACACCTACGAGTACAGGCACGTCGTCCTTCCGCCGGAGGTCGCCAAGCTCCTCCCCAAGAATCGCCTTCTCTCCGAGAACGAGTGGCGCGCGATCGGAGTGCAGCAGAGCCGCGGGTGGGTGCACTACGCG ATCCACCGGCCGGAGCCGCACATCATGCTGTTCCGCCGCCCGCTCAACTTCCAGCAGCAGCAGGAGGCAGCCGCGGCTGCAGCGGCGCAGATGCTGCCCAAGTGACTG CCCCCTTCCACGCGGCGATGGCGGCGACCCGGGGTTGAAATGTGCGAAACCCTAGCCCCTTTACATNTCTTAAAGGGGGTTCGCGATACTGCTAATTTACTTTCG TTGTTAGTTGGAAATCTTAGTGATGTT GGTGGTGTCCA CTTGTGTTCGTGAGAATGCCCGAGTAGGAACTGGCATGTAAACGTCTGTGTTA ] [+] EMBL C97125 [ GCCGCTGCTTCACACCATCCGCATCCTCCCCGCTCGCNGCCGCGCCGCTCCAAGTTTCTTTCGTGAGGAGTTGATCGAGGAGTTGGGGTTGAGATGGGCCAGATCCAGNACTCCGAGAAGNACTTCGACGACACCTACGAGTACAGGCACNTCGTCCTTCCGCCGGA GTCGCCAAGCTCCTCCCCAAGAATCGCCTTCTCTCCGAGAACGAGTGGCGCGCGATCGGAGTGCAGCAGA NCGCGGGTGGGTNCACTACGCG ATCCAn ] [-] EMBL CF331570 [ CCAGTACTCCGAGAAGTACTTCGACGACACCTACGAGTACAGGCACGTCGTCCTTCCGCCGGAGGTCGCCAAGCTCCTCCCCAAGAATCGCCTTCTCTCCGAGAACGAGTGGCGCGCGATCGGAGTGCAGCAGAGCCGCGGGTGGGTGCACTACGCG ATCCACCGGCCGGAGCCGCACATCATGCTGTTCCGCCGCCCGCTCAACTTCCAGCAGCAGCAGGAGGCAGCCGCGGCTGCAGCGGCGCAGATGCTGCCCAAGTGACTG CCCCC TCCACGCGGCGATGGCGGCGACCCGGGGTTGAAATGTGCGAAACCCTAGCCCCTTTACATCTCTTAAAGGGGGTTCGCGATACTGCTAATTTACTTTCGTTTGTTAGTTGGAAATCTTAGTGATGTT GGTGGTGTCCCCCTTGTGTTCGTGAGAATGCCCGAGTAGGAACTGGCATGTAAACGTCTGTGTTATCTTGGATACTTTTCATTGCTAAGCTATTATATGTGATGCTGGTACTGTTGTTAAACTGTTACAACTTACTACTACTATATGGAAAAAAAA ] [+] EMBL C97126 [ GAATGCCCCCCNATCGAATTCCANCA AACCCCGGTTGGTTGCANTACGCGAATCCACCGGCCGGAGCCGCACATCATGCTGTTCCGCCGCCCGCTCAACTTCCAGCAGCAGCAGGAGGCAGCCGCGGCTGCAGCGGCGCAGATGCTGCCCAAGTGACTG CCCCC TCCACGCGGCGATGGCGGCGACCCGGGGTTGAAATGTGCGAAACCCTAGCCCCTTTACATCTCTTAAAGGGGGTTCGCGATACTGCTAATTTACTTTCGTTTGTTAGTTGGAAATCTTAGTGATGTT GGTGGTGTCCACCTTGTGTTCGTGAGAATGCCCGAGTAGGAACTGGCATGTAAACGTCTGTGTTATCTTGGATACTTTTCATTGCTAAGCTATTATATGTGATGCTGGTAaaaaaaaaa ] [-] EMBL CF281334 [ GTTCCGCCGCCCGCTCAACTTCCAGCAGCAGCAGGAGGCAGCCGCGGCTGCAGCGGCGCAGATGCTGCCCAAGTGACTGCCCCCC TCCACGCGGCGATGGCGGCGACCCGGGGTTGAAATGTGCGAAACCCTAGCCCCTTTACATTTTTTAAAGGGGGTTCGCGATACTGCTAATTTACTTTCGTTTGTTAGTTGGAAATCTTAGTGATGTT GGTGGTGTCCCCCTTGTGTTCGTGAGAATGCCCGAGTAGGAACTGGCATGTAAACGTCTGTGTTATCTTGGATACTTTTCATTGCTAAGCTATTATATGTGATGCTGGTACTGTTGTTAAACTGTTACAACTTACTACTACTATATGTGACATTCTGATTGTGGTCATGCTTAGCCTTTAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||