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Oryza sativa
cluster # 11369 cluster # 11369       Sequences # 8       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11369#0 length = 1716 sequences # 5  
consensus_11369#1 length = 706 sequences # 1  
consensus_11369#2 length = 395 sequences # 1  
consensus_11369#3 length = 249 sequences # 1  

consensusID : consensus_11369#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1716
fasta sequence
                              [TCTACCTGGACCCGCACAGTAGTCTGTTGTCGTCCTCGATCGGATCAGCTACCGGCTTTCCGTTGATATCTCCGCGCTTGATGGCCGCCGCCGCCGCGGTCGCCTCCCTCCTCGGCTTCGTCCTCGCTCTCCCTTTCTGCTTGGCGGCGCCGTCCATCACAACGCATGGCAGCGACGGCGGCGGCGGCAGCTACGTGTCGGCGGTCGGGGACCCCGGCATGCGGCGCGACGGCCTCCACGTCGCCTGGGAGGCATGGAACTTCTGTAACGAGGTCGGCCAGGAGGCCCCCGGCATGGGCAGCCCCCGCGGCGCCGACTGCTTCGACCTCGAGAATGGCGTGGACGAGAACGGCCAGCCGACGTACAAGGTGGTGCACCGGGTGACCGACGCCGACAACAACCTCCGCGCCGGCGACCCTCTCCCGGGCTCGCCGGCGAACATCACGGACGTCGACCTGTACGCGGCGGCGAAGGAGCTCTACCTGGGCGACCGGTGCCAGGTGCCCGACAGCCCGTCGCCGTGGCAGTTCTGGATGGTCATGCTCAAGAACGGCAACCTGGACACCACCGCCGCCATCTGCCCGGAGAACGGCCGCCCGGCGCGCCCGTTCTCGCAGACCTCGAGGTTCCCCTGCCCCGGCGGCGCCGGCTGCATGAACCAGCCGCTCGTGTTCCACAACCGCACCGCGCTGGACGCCACGGCCCGGCGCCTCCGCGGCGGGCTGTTCGGCACGTACGACCTCGACGCGGCGGACCTCGGCAGCAGAGAAGTGTCGTACTACTCGGTGACGTGGGAGAAGGACATCGGGAGCGGCGGCGACGGTGGGTGGGTGTTCCACCACAAGCTGCGCACTGCGCCCAAGTACCCGTGGCTGATGCTTTACCTCCGCTCCGACGCCACCAAGGGATTCTCCGGTGGATACCACTACGACACCAGAGGCATGACCAAGATGGTGCCGGAATCACCAAACTTCAAGGTGAGGGTGACGCTGGAGGTGAAGCAAGGCGGAGGCCCCAACAGCCAGTTCTACCTCATGGACATGGGCAGCTGCTGGAAGAACGACGGCCGGCCGTGCGACGGCGACACCGCGACGGACGTGACGCGGTACAGCGAGATGATCATCAACCCGGAGACGCCGTCGTGGTGCACGCGGAGGCGCATCGAGGAGTGCCCGCCGTGGCACACGTTCCGGAACGGCACCCGCGTGCACCGCACCGACGCGGCCCGCTTCCCCTACGCGGCGTACCACGTCTACTGCTCTCCCGGGAACGCGCGCGCCGCCGAGGAGCCGACCACCTACTGCGACGCGTACAGCAACCCGCAGCCGCAGGAGATCCTGCAGCTCGTGCCGCACCCGGTGTGGGGTGAGTTCGGCTACCCCACGGCGAAAGGCCAGGGGTGGATCGGTGACCCCAGGACATGGGAGCTCGACGTCGGAGCATTGTCGCAGGCGCTCTACTTCTACCAGGATCCGGGCACGCCACCGGCGAAGAGGAGGTGGTCGTCGCTGGACGTCGGAACGGAGATATACGTCAGCAAGTATGCGGAGGCAGAGTGGACGCTGAGTGGATTCGACATTGTTGTGCCGGAGGAATGCATTGGGTCGTCCCAAGGAGGACCCGTCAGTCGATGTTTGTAAAGTTGGTGATCAACGAGTTAATTAAGAAACACTTATAGATTCATTATTGGAATAATATCGTGTTCCCTTCCAAAAA]

[+] EMBL AK068945             [TCTACCTGGACCCGCACAGTAGTCTGTTGTCGTCCTCGATCGGATCAGCTACCGGCTTTCCGTTGATATCTCCGCGCTTGATGGCCGCCGCCGCCGCGGTCGCCTCCCTCCTCGGCTTCGTCCTCGCTCTCCCTTTCTGCTTGGCGGCGCCGTCCATCACAACGCATGGCAGCGACGGCGGCGGCGGCAGCTACGTGTCGGCGGTCGGGGACCCCGGCATGCGGCGCGACGGCCTCCACGTCGCCTGGGAGGCATGGAACTTCTGTAACGAGGTCGGCCAGGAGGCCCCCGGCATGGGCAGCCCCCGCGGCGCCGACTGCTTCGACCTCGAGAATGGCGTGGACGAGAACGGCCAGCCGACGTACAAGGTGGTGCACCGGGTGACCGACGCCGACAACAACCTCCGCGCCGGCGACCCTCTCCCGGGCTCGCCGGCGAACATCACGGACGTCGACCTGTACGCGGCGGCGAAGGAGCTCTACCTGGGCGACCGGTGCCAGGTGCCCGACAGCCCGTCGCCGTGGCAGTTCTGGATGGTCATGCTCAAGAACGGCAACCTGGACACCACCGCCGCCATCTGCCCGGAGAACGGCCGCCCGGCGCGCCCGTTCTCGCAGACCTCGAGGTTCCCCTGCCCCGGCGGCGCCGGCTGCATGAACCAGCCGCTCGTGTTCCACAACCGCACCGCGCTGGACGCCACGGCCCGGCGCCTCCGCGGCGGGCTGTTCGGCACGTACGACCTCGACGCGGCGGACCTCGGCAGCAGAGAAGTGTCGTACTACTCGGTGACGTGGGAGAAGGACATCGGGAGCGGCGGCGACGGTGGGTGGGTGTTCCACCACAAGCTGCGCACTGCGCCCAAGTACCCGTGGCTGATGCTTTACCTCCGCTCCGACGCCACCAAGGGATTCTCCGGTGGATACCACTACGACACCAGAGGCATGACCAAGATGGTGCCGGAATCACCAAACTTCAAGGTGAGGGTGACGCTGGAGGTGAAGCAAGGCGGAGGCCCCAACAGCCAGTTCTACCTCATGGACATGGGCAGCTGCTGGAAGAACGACGGCCGGCCGTGCGACGGCGACACCGCGACGGACGTGACGCGGTACAGCGAGATGATCATCAACCCGGAGACGCCGTCGTGGTGCACGCGGAGGCGCATCGAGGAGTGCCCGCCGTGGCACACGTTCCGGAACGGCACCCGCGTGCACCGCACCGACGCGGCCCGCTTCCCCTACGCGGCGTACCACGTCTACTGCTCTCCCGGGAACGCGCGCGCCGCCGAGGAGCCGACCACCTACTGCGACGCGTACAGCAACCCGCAGCCGCAGGAGATCCTGCAGCTCGTGCCGCACCCGGTGTGGGGTGAGTTCGGCTACCCCACGGCGAAAGGCCAGGGGTGGATCGGTGACCCCAGGACATGGGAGCTCGACGTCGGAGCATTGTCGCAGGCGCTCTACTTCTACCAGGATCCGGGCACGCCACCGGCGAAGAGGAGGTGGTCGTCGCTGGACGTCGGAACGGAGATATACGTCAGCAAGTATGCGGAGGCAGAGTGGACGCTGAGTGGATTCGACATTGTTGTGCCGGAGGAATGCATTGGGTCGTCCCAAGGAGGACCCGTCAGTCGATGTTTGTAAAGTTGGTGATCAACGAGTTAATTAAGAAACACTTATAGATTCATTATTGGAATAATATCGT               ]
[-] EMBL CB650035             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CATGACCAAGATGGTGCCGGAATCACCAAACTTCAAGGTGAGGGTGACGCTGGAGGTGAAGCAAGGCGGAGGCCCCAACAGCCAGTTCTACCTCATGGACATGGGCAGCTGCTGGAAGAACGACGGCCGGCCGTGCGACGGCGACACCGCGACGGACGTGACGCGGTACAGCGAGATGATCATCAACCCGGAGACGCCGTCGTGGTGCACGCGGAGGCGCATCGAGGAGTGCCCGCCGTGGCACACGTTCCGGAACGGCACCCGCGTGCACCGCACCGACGCGGCCCGCTTCCCCTACGCGGCGTACCACGTTTACTGCTCTCCCGGGAACGCGCGCGCCGCCGAGGAGCCGACCACCTACTGCGACGCGTACAGCAACCCGCAGCCGCAGGAGATCCTGCAGCTCGTGCCGCACCCGGTGTGGGGTGAGTTCGGCTACCCCACGGCGAAAGGCCAGGGGTGGATCGGTGACCCCAGGACATGGGAGCTCGACGTCGGAGCATTGTCGCAGGCGCTCTACTTCTACCAGGATCCGGGCACGCCACCGGCGAAGAGGAGGTGGTCGTCGCTGGACGTCGGAACGGAGATATACGTCAGCAAGTATGCGGAGGCAGAGTGGACGCTGAGTGGATTCGACATTGTTGTGCCGGAGGAATGCATTGGGTCGTCCCAAGGAGGACCCGTCAGTCGATGTTTGTAAAGTTGGTGATCAACGAGTTAATTAAGAATCAAAAAGAGATTCATTATTGGAATAATATCGTGTTCCCT        ]
[+] EMBL OSS13067A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAGAACGACGGCCGGCCGTGCGACGGCGACACCGCGACGGACGTGACGCGGTACAGCGAGATGATCATCAACCCGGAGACGCCGTCGTGGTGCACGCGGAGGCGNATCGAGGAGTGCCCGCCGTGGCACACGTTCCGGAACGGCACCCGCGTGCACCGCACCGACGCGGCCCGCTTCCCCTACGCGGCGTACCACGTCTACTGCTCTCCCGGGAACGCGCGCGACGCCGAGGAGCCGACCACNTACTGCGACGCGTACAGCAACCCGCAGCCGCAGGAGATCCTGCAGCTCGTGCCGAACCNGGTGTGGG                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL OSR14782A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTACTGCGACGCGTACAGCAACCCGCAGCCGCAGGAGATCCTGCAGCTCGTGCCGCACCCGGTGTGGGGTGAGTTCGGCTACCCCACGGCGAAAGGCCAGGGGTNGATCGGTGACCCCAGGACATGGGAGCTCGACGTCGGAGCATTGTCGCAGGCGCTCTACTTCTACCAGGATCCGGGCACGNCACCGG GAAGAGGAGGTGGTCGTCGCTGGACGTCGGAACGGAGATATACGTCAGCAAGTATGCGGAGGCAGAGTGGACGCTGAGTGGATTCGACATTTTTGTTCCGGA GAATGCATTGGGTCGTCCCAAGGAGGACCCGTCAGT                                                                                        ]
[+] EMBL AU173154             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AACCCGCAGCCGCAGGAGATCCTGCAGCTCGTGCCGCACCCGGTGTGGGGTGAGTTCGGCTACCCCACGGCGAAAGGCCAGGGGTGGATCGGTGACCCCAGGACATGGGAGCTCGACGTCGGAGCATTGTCGCAGGCGCTCTACTTCTACCAGGATCCGGGCACGCCACCGGCGAAGAGGAGGTGGTCGTCGCTGGACGTCGGAACGGAGATATACGTCAGCAAGTATGCGGAGGCAGAGTGGACGCTGAGTGGATTCGACATTGTTGTGCCGGAGGAATGCATTGGGTCGTCCCAAGGAGGACCCGTCAGTCGATGTTTGTAAAGTTGGTGATCAACGAGTTAATTAAGAAACACTTATAGATTCATTATTGGAATAATATCGTGTTCCCTTCCAAAAA]


>consensus_11369#0 TCTACCTGGACCCGCACAGTAGTCTGTTGTCGTCCTCGATCGGATCAGCTACCGGCTTTC CGTTGATATCTCCGCGCTTGATGGCCGCCGCCGCCGCGGTCGCCTCCCTCCTCGGCTTCG TCCTCGCTCTCCCTTTCTGCTTGGCGGCGCCGTCCATCACAACGCATGGCAGCGACGGCG GCGGCGGCAGCTACGTGTCGGCGGTCGGGGACCCCGGCATGCGGCGCGACGGCCTCCACG TCGCCTGGGAGGCATGGAACTTCTGTAACGAGGTCGGCCAGGAGGCCCCCGGCATGGGCA GCCCCCGCGGCGCCGACTGCTTCGACCTCGAGAATGGCGTGGACGAGAACGGCCAGCCGA CGTACAAGGTGGTGCACCGGGTGACCGACGCCGACAACAACCTCCGCGCCGGCGACCCTC TCCCGGGCTCGCCGGCGAACATCACGGACGTCGACCTGTACGCGGCGGCGAAGGAGCTCT ACCTGGGCGACCGGTGCCAGGTGCCCGACAGCCCGTCGCCGTGGCAGTTCTGGATGGTCA TGCTCAAGAACGGCAACCTGGACACCACCGCCGCCATCTGCCCGGAGAACGGCCGCCCGG CGCGCCCGTTCTCGCAGACCTCGAGGTTCCCCTGCCCCGGCGGCGCCGGCTGCATGAACC AGCCGCTCGTGTTCCACAACCGCACCGCGCTGGACGCCACGGCCCGGCGCCTCCGCGGCG GGCTGTTCGGCACGTACGACCTCGACGCGGCGGACCTCGGCAGCAGAGAAGTGTCGTACT ACTCGGTGACGTGGGAGAAGGACATCGGGAGCGGCGGCGACGGTGGGTGGGTGTTCCACC ACAAGCTGCGCACTGCGCCCAAGTACCCGTGGCTGATGCTTTACCTCCGCTCCGACGCCA CCAAGGGATTCTCCGGTGGATACCACTACGACACCAGAGGCATGACCAAGATGGTGCCGG AATCACCAAACTTCAAGGTGAGGGTGACGCTGGAGGTGAAGCAAGGCGGAGGCCCCAACA GCCAGTTCTACCTCATGGACATGGGCAGCTGCTGGAAGAACGACGGCCGGCCGTGCGACG GCGACACCGCGACGGACGTGACGCGGTACAGCGAGATGATCATCAACCCGGAGACGCCGT CGTGGTGCACGCGGAGGCGCATCGAGGAGTGCCCGCCGTGGCACACGTTCCGGAACGGCA CCCGCGTGCACCGCACCGACGCGGCCCGCTTCCCCTACGCGGCGTACCACGTCTACTGCT CTCCCGGGAACGCGCGCGCCGCCGAGGAGCCGACCACCTACTGCGACGCGTACAGCAACC CGCAGCCGCAGGAGATCCTGCAGCTCGTGCCGCACCCGGTGTGGGGTGAGTTCGGCTACC CCACGGCGAAAGGCCAGGGGTGGATCGGTGACCCCAGGACATGGGAGCTCGACGTCGGAG CATTGTCGCAGGCGCTCTACTTCTACCAGGATCCGGGCACGCCACCGGCGAAGAGGAGGT GGTCGTCGCTGGACGTCGGAACGGAGATATACGTCAGCAAGTATGCGGAGGCAGAGTGGA CGCTGAGTGGATTCGACATTGTTGTGCCGGAGGAATGCATTGGGTCGTCCCAAGGAGGAC CCGTCAGTCGATGTTTGTAAAGTTGGTGATCAACGAGTTAATTAAGAAACACTTATAGAT TCATTATTGGAATAATATCGTGTTCCCTTCCAAAAA



consensusID : consensus_11369#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 706
fasta sequence
                              [CGTTGCTATCTCCGCGCTTGATGGCCGCCGCCGCCGCGGTCGCCTCCCTCCTCGGCTTCGTCCTCGCTCTCCCTTTCTGCTTGGCGGCGCCGTCCATCACAACGCATGGCAGCGACGGCGGCGGCGGCAGCTACGTGTCGGCGGTCGGGGACCCCGGCATGCGGCGCGACGGCCTCCACGTCGCCTGGGAGGCATGGAACTTCTGTAACGAGGTCGGCCAGGAGGCCCCCGGCATGGGCAGCCCCCGCGGCGCCGACTGCTTCGACCTCGTCAGAGCTGGGAAATTCGCAGAGAATGGCGTGGACGAGAACGGCCAGCCGACGTACAAGGTGGTGCACCGGGTGACCGACGCCGACAACAACCTCCGCGCCGGCGACCCTCTCCCGGGCTCGCCGGCGAACATCACGGACGTCGACCTGTACGCGGCGGCGAAGGAGCTCTACCTGGGCGACCGGTGCCAGGTGCCCGACAGCCCGTCGCCGTGGCAGTTCTGGATGGTCATGCTCAAGAACGGCAACCTGGACACCACCGCCGCCATCTGCCCGGAGAACGGCCGCCCGGCGCGCCCGTTCTCGCAGACCTCGAGGTTCCCCTGCCCCGGCGGCGCCGGCTGCATGAACCAGCCGCTCGTGTTCCACAACCGCACCGCGCTGGACGCCACGGCCCGGCGCCTCCGCGGCGGGCTGTTCGGCACGTACGACCTCGA]

[+] EMBL CB650034             [CGTTGCTATCTCCGCGCTTGATGGCCGCCGCCGCCGCGGTCGCCTCCCTCCTCGGCTTCGTCCTCGCTCTCCCTTTCTGCTTGGCGGCGCCGTCCATCACAACGCATGGCAGCGACGGCGGCGGCGGCAGCTACGTGTCGGCGGTCGGGGACCCCGGCATGCGGCGCGACGGCCTCCACGTCGCCTGGGAGGCATGGAACTTCTGTAACGAGGTCGGCCAGGAGGCCCCCGGCATGGGCAGCCCCCGCGGCGCCGACTGCTTCGACCTCGTCAGAGCTGGGAAATTCGCAGAGAATGGCGTGGACGAGAACGGCCAGCCGACGTACAAGGTGGTGCACCGGGTGACCGACGCCGACAACAACCTCCGCGCCGGCGACCCTCTCCCGGGCTCGCCGGCGAACATCACGGACGTCGACCTGTACGCGGCGGCGAAGGAGCTCTACCTGGGCGACCGGTGCCAGGTGCCCGACAGCCCGTCGCCGTGGCAGTTCTGGATGGTCATGCTCAAGAACGGCAACCTGGACACCACCGCCGCCATCTGCCCGGAGAACGGCCGCCCGGCGCGCCCGTTCTCGCAGACCTCGAGGTTCCCCTGCCCCGGCGGCGCCGGCTGCATGAACCAGCCGCTCGTGTTCCACAACCGCACCGCGCTGGACGCCACGGCCCGGCGCCTCCGCGGCGGGCTGTTCGGCACGTACGACCTCGA]


>consensus_11369#1 CGTTGCTATCTCCGCGCTTGATGGCCGCCGCCGCCGCGGTCGCCTCCCTCCTCGGCTTCG TCCTCGCTCTCCCTTTCTGCTTGGCGGCGCCGTCCATCACAACGCATGGCAGCGACGGCG GCGGCGGCAGCTACGTGTCGGCGGTCGGGGACCCCGGCATGCGGCGCGACGGCCTCCACG TCGCCTGGGAGGCATGGAACTTCTGTAACGAGGTCGGCCAGGAGGCCCCCGGCATGGGCA GCCCCCGCGGCGCCGACTGCTTCGACCTCGTCAGAGCTGGGAAATTCGCAGAGAATGGCG TGGACGAGAACGGCCAGCCGACGTACAAGGTGGTGCACCGGGTGACCGACGCCGACAACA ACCTCCGCGCCGGCGACCCTCTCCCGGGCTCGCCGGCGAACATCACGGACGTCGACCTGT ACGCGGCGGCGAAGGAGCTCTACCTGGGCGACCGGTGCCAGGTGCCCGACAGCCCGTCGC CGTGGCAGTTCTGGATGGTCATGCTCAAGAACGGCAACCTGGACACCACCGCCGCCATCT GCCCGGAGAACGGCCGCCCGGCGCGCCCGTTCTCGCAGACCTCGAGGTTCCCCTGCCCCG GCGGCGCCGGCTGCATGAACCAGCCGCTCGTGTTCCACAACCGCACCGCGCTGGACGCCA CGGCCCGGCGCCTCCGCGGCGGGCTGTTCGGCACGTACGACCTCGA



consensusID : consensus_11369#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 395
fasta sequence
                              [AACTTCAAGGTGAGGGTGAACCTGGAGGTGAAGCAAGGCGGAGGCCCCAGCAGCCAGTTCTACCTCATGGACATGGGCAGCTGCTGGAAGAACGACGGCCGCCCGTGCGACGGCGACACCGCCACGGACGTGACGCGGTACAGCGAGATGATCATCAACCCGGAGACGCCGTCGTGGTGCACGCCGGGGAAGGTCGGGCTGTGCCCGCCGTGGCACACGTTCCGGAACGGCACGCGCGTGCACCGCACCGACGCCGCCCGGTTCCCGTACGCCGCCTACCACATGTACTGCTCCCCCGGGAACGCGCGCGCCGCCGAGCAGCCCACCACCCCGTGCGACCCCTACAGCAACCCGCAGCCGCAGGAGATCATGCAGCTCGTGCCGCACCCGGTGTG]

[+] EMBL AU225318             [AACTTCAAGGTGAGGGTGAACCTGGAGGTGAAGCAAGGCGGAGGCCCCAGCAGCCAGTTCTACCTCATGGACATGGGCAGCTGCTGGAAGAACGACGGCCGCCCGTGCGACGGCGACACCGCCACGGACGTGACGCGGTACAGCGAGATGATCATCAACCCGGAGACGCCGTCGTGGTGCACGCCGGGGAAGGTCGGGCTGTGCCCGCCGTGGCACACGTTCCGGAACGGCACGCGCGTGCACCGCACCGACGCCGCCCGGTTCCCGTACGCCGCCTACCACATGTACTGCTCCCCCGGGAACGCGCGCGCCGCCGAGCAGCCCACCACCCCGTGCGACCCCTACAGCAACCCGCAGCCGCAGGAGATCATGCAGCTCGTGCCGCACCCGGTGTG]


>consensus_11369#2 AACTTCAAGGTGAGGGTGAACCTGGAGGTGAAGCAAGGCGGAGGCCCCAGCAGCCAGTTC TACCTCATGGACATGGGCAGCTGCTGGAAGAACGACGGCCGCCCGTGCGACGGCGACACC GCCACGGACGTGACGCGGTACAGCGAGATGATCATCAACCCGGAGACGCCGTCGTGGTGC ACGCCGGGGAAGGTCGGGCTGTGCCCGCCGTGGCACACGTTCCGGAACGGCACGCGCGTG CACCGCACCGACGCCGCCCGGTTCCCGTACGCCGCCTACCACATGTACTGCTCCCCCGGG AACGCGCGCGCCGCCGAGCAGCCCACCACCCCGTGCGACCCCTACAGCAACCCGCAGCCG CAGGAGATCATGCAGCTCGTGCCGCACCCGGTGTG



consensusID : consensus_11369#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 249
fasta sequence
                              [TGTAAAGNATGTGAAGGTTGGTNCGTCCGNCTTGGACTGTTCTGGAACCGGAGATATACGTCAGCAAGTATGCGGAGGCAGAGTGGACGCTGAGTGGATTCGACATTGTTGTGCCGGAGGAATGCATTGGGTCGTCCCAAGGAGGACCCGTCAGTCGATGTTTGTAAAGTTGGTGATCAACGAGTTAATTAAGAAACACTTATAGATTCATTATTGGAATAATATCGTGTTCCCTTCAAAAAAAAAAAA]

[+] EMBL AU088701             [TGTAAAGNATGTGAAGGTTGGTNCGTCCGNCTTGGACTGTTCTGGAACCGGAGATATACGTCAGCAAGTATGCGGAGGCAGAGTGGACGCTGAGTGGATTCGACATTGTTGTGCCGGAGGAATGCATTGGGTCGTCCCAAGGAGGACCCGTCAGTCGATGTTTGTAAAGTTGGTGATCAACGAGTTAATTAAGAAACACTTATAGATTCATTATTGGAATAATATCGTGTTCCCTTCAAAAAAAAAAAA]


>consensus_11369#3 TGTAAAGNATGTGAAGGTTGGTNCGTCCGNCTTGGACTGTTCTGGAACCGGAGATATACG TCAGCAAGTATGCGGAGGCAGAGTGGACGCTGAGTGGATTCGACATTGTTGTGCCGGAGG AATGCATTGGGTCGTCCCAAGGAGGACCCGTCAGTCGATGTTTGTAAAGTTGGTGATCAA CGAGTTAATTAAGAAACACTTATAGATTCATTATTGGAATAATATCGTGTTCCCTTCAAA AAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11369#0      TCTACCTGGACCCGCACAGTAGTCTGTTGTCGTCCTCGATCGGATCAGCTACCGGCTTTC 60
consensus_11369#1      ------------------------------------------------------------
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      CGTTGATATCTCCGCGCTTGATGGCCGCCGCCGCCGCGGTCGCCTCCCTCCTCGGCTTCG 120
consensus_11369#1      CGTTGCTATCTCCGCGCTTGATGGCCGCCGCCGCCGCGGTCGCCTCCCTCCTCGGCTTCG 60
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      TCCTCGCTCTCCCTTTCTGCTTGGCGGCGCCGTCCATCACAACGCATGGCAGCGACGGCG 180
consensus_11369#1      TCCTCGCTCTCCCTTTCTGCTTGGCGGCGCCGTCCATCACAACGCATGGCAGCGACGGCG 120
consensus_11369#2      -----------AACTTCAAGGTGAGGGTGAACCTGGAGGTGAAGCAAGGCGGAGGCCCCA 49
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      GCGGCGGCAGCTACGTGTCGGCGGTCGGGGACCCCGGCATGCGGCGCGACGGCCTCCACG 240
consensus_11369#1      GCGGCGGCAGCTACGTGTCGGCGGTCGGGGACCCCGGCATGCGGCGCGACGGCCTCCACG 180
consensus_11369#2      GCAGC--CAGTTCTACCTCA-TGGACATGGGCAGCTGCTGGAAGAACGACGGCCGCCCGT 106
consensus_11369#3      ----------------TGTAAAGNATGTGAAGGTTGGTNCGTCCGNCTTGGACTGTTCTG 44
                                             *     *       *   *     *   * *       

consensus_11369#0      TCGCCTGGGAGGCATGGAACTTCTGTAACGAGGT-CGGCCAGGAGGCCCCCGGCATGGGC 299
consensus_11369#1      TCGCCTGGGAGGCATGGAACTTCTGTAACGAGGT-CGGCCAGGAGGCCCCCGGCATGGGC 239
consensus_11369#2      GCGACGGCGACAC-CGCCACGGACGTGACGCGGTACAGCGAGATGATCATCAACCCGGAG 165
consensus_11369#3      GAACCGGAGATATACGTCA-GCAAGT-ATGCGGA--GGCAGAGTGGACGCTGA-GTGGAT 99
                           * * **     *  *     ** * * **    **     *  *        **  

consensus_11369#0      A-GCCCCCGCGGCGCCGACTGCTTCGACCTCG---------------------AGAATGG 337
consensus_11369#1      A-GCCCCCGCGGCGCCGACTGCTTCGACCTCGTCAGAGCTGGGAAATTCGCAGAGAATGG 298
consensus_11369#2      ACGCCGTCGTGGTGCACGCCGGGGAAGGTCGG-----------------GCTGTGCCCGC 208
consensus_11369#3      TCGACATTGTTGTGCCGGAGGAATGCATTGGGTCG-------------TCCCAAGGAGGA 146
                         * *   *  * **     *          *                      *   * 

consensus_11369#0      CGTGGACGAGAACGGCCAGCCGACGTACAAGGTGGTGCACCGGGTGACCGACGCCGACAA 397
consensus_11369#1      CGTGGACGAGAACGGCCAGCCGACGTACAAGGTGGTGCACCGGGTGACCGACGCCGACAA 358
consensus_11369#2      CGTG---GCACACGTTCCG--GAACGGCACGCGCGTGCACCGC---ACCGACGCCGCCCG 260
consensus_11369#3      CCCGTCAGTCGATGTTT-GTAAAGTTGGTGATCAACGAGTTAATTAAGAAACACTTATAG 205
                       *  *   *   * *    *   *             *         *   ** *      

consensus_11369#0      CAACCTCCGCGCCGGCGACCCTCTCCCGGGCTCGCCGGCGAACATCACGGACGTCGACCT 457
consensus_11369#1      CAACCTCCGCGCCGGCGACCCTCTCCCGGGCTCGCCGGCGAACATCACGGACGTCGACCT 418
consensus_11369#2      GTTCCCGTACGCCGCCTACCACATGTACTGCTCCCCCGGGAACGCGCGCGCCGCCGAGCA 320
consensus_11369#3      ATTCAT---TATTGG-AATAATATCGTGTTCCCTTCAAAAAAAAAAAA------------ 249
                          *         *   *     *      * *  *    **                  

consensus_11369#0      GTACGCGGCGGCGAAGGAGCTCTACCTGGGCGACCGGTGCCAGGTGCCCG-ACAGCCCGT 516
consensus_11369#1      GTACGCGGCGGCGAAGGAGCTCTACCTGGGCGACCGGTGCCAGGTGCCCG-ACAGCCCGT 477
consensus_11369#2      GCCCACCACCCCGTGCGACCCCTACAGCAACCCGCAGCCGCAGGAGATCATGCAGCTCGT 380
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      CGCCGTGGCAGTTCTGGATGGTCATGCTCAAGAACGGCAACCTGGACACCACCGCCGCCA 576
consensus_11369#1      CGCCGTGGCAGTTCTGGATGGTCATGCTCAAGAACGGCAACCTGGACACCACCGCCGCCA 537
consensus_11369#2      -GCCGCACCCGGTGTG-------------------------------------------- 395
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      TCTGCCCGGAGAACGGCCGCCCGGCGCGCCCGTTCTCGCAGACCTCGAGGTTCCCCTGCC 636
consensus_11369#1      TCTGCCCGGAGAACGGCCGCCCGGCGCGCCCGTTCTCGCAGACCTCGAGGTTCCCCTGCC 597
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      CCGGCGGCGCCGGCTGCATGAACCAGCCGCTCGTGTTCCACAACCGCACCGCGCTGGACG 696
consensus_11369#1      CCGGCGGCGCCGGCTGCATGAACCAGCCGCTCGTGTTCCACAACCGCACCGCGCTGGACG 657
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      CCACGGCCCGGCGCCTCCGCGGCGGGCTGTTCGGCACGTACGACCTCGACGCGGCGGACC 756
consensus_11369#1      CCACGGCCCGGCGCCTCCGCGGCGGGCTGTTCGGCACGTACGACCTCGA----------- 706
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      TCGGCAGCAGAGAAGTGTCGTACTACTCGGTGACGTGGGAGAAGGACATCGGGAGCGGCG 816
consensus_11369#1      ------------------------------------------------------------
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      GCGACGGTGGGTGGGTGTTCCACCACAAGCTGCGCACTGCGCCCAAGTACCCGTGGCTGA 876
consensus_11369#1      ------------------------------------------------------------
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      TGCTTTACCTCCGCTCCGACGCCACCAAGGGATTCTCCGGTGGATACCACTACGACACCA 936
consensus_11369#1      ------------------------------------------------------------
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      GAGGCATGACCAAGATGGTGCCGGAATCACCAAACTTCAAGGTGAGGGTGACGCTGGAGG 996
consensus_11369#1      ------------------------------------------------------------
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      TGAAGCAAGGCGGAGGCCCCAACAGCCAGTTCTACCTCATGGACATGGGCAGCTGCTGGA 1056
consensus_11369#1      ------------------------------------------------------------
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      AGAACGACGGCCGGCCGTGCGACGGCGACACCGCGACGGACGTGACGCGGTACAGCGAGA 1116
consensus_11369#1      ------------------------------------------------------------
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      TGATCATCAACCCGGAGACGCCGTCGTGGTGCACGCGGAGGCGCATCGAGGAGTGCCCGC 1176
consensus_11369#1      ------------------------------------------------------------
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      CGTGGCACACGTTCCGGAACGGCACCCGCGTGCACCGCACCGACGCGGCCCGCTTCCCCT 1236
consensus_11369#1      ------------------------------------------------------------
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      ACGCGGCGTACCACGTCTACTGCTCTCCCGGGAACGCGCGCGCCGCCGAGGAGCCGACCA 1296
consensus_11369#1      ------------------------------------------------------------
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      CCTACTGCGACGCGTACAGCAACCCGCAGCCGCAGGAGATCCTGCAGCTCGTGCCGCACC 1356
consensus_11369#1      ------------------------------------------------------------
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      CGGTGTGGGGTGAGTTCGGCTACCCCACGGCGAAAGGCCAGGGGTGGATCGGTGACCCCA 1416
consensus_11369#1      ------------------------------------------------------------
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      GGACATGGGAGCTCGACGTCGGAGCATTGTCGCAGGCGCTCTACTTCTACCAGGATCCGG 1476
consensus_11369#1      ------------------------------------------------------------
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      GCACGCCACCGGCGAAGAGGAGGTGGTCGTCGCTGGACGTCGGAACGGAGATATACGTCA 1536
consensus_11369#1      ------------------------------------------------------------
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      GCAAGTATGCGGAGGCAGAGTGGACGCTGAGTGGATTCGACATTGTTGTGCCGGAGGAAT 1596
consensus_11369#1      ------------------------------------------------------------
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      GCATTGGGTCGTCCCAAGGAGGACCCGTCAGTCGATGTTTGTAAAGTTGGTGATCAACGA 1656
consensus_11369#1      ------------------------------------------------------------
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   

consensus_11369#0      GTTAATTAAGAAACACTTATAGATTCATTATTGGAATAATATCGTGTTCCCTTCCAAAAA 1716
consensus_11369#1      ------------------------------------------------------------
consensus_11369#2      ------------------------------------------------------------
consensus_11369#3      ------------------------------------------------------------
                                                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)