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Oryza sativa
cluster # 11376 cluster # 11376       Sequences # 8       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11376#0 length = 2168 sequences # 3  
consensus_11376#1 length = 1579 sequences # 1  
consensus_11376#2 length = 1176 sequences # 2  
consensus_11376#3 length = 624 sequences # 2  

consensusID : consensus_11376#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2168
fasta sequence
                              [GCTGCTACCACCACAAACATTCTACCGCGGGACACACACTCGTCTTTACCACACAACACGAGCACGCGCGCGAGAGAGAAAGGGGGAGATAAGAGCAGTTTGACTTCGAGCTTCAACCACAGCCGAGTGATCCATGGCGGCAGGGGAGCAACCGGGAACTGGGTCGCCGCCGCAGCCGTCGACCCGCCTCTTCCTCCTCGTCCTCGCAGTCATCCTCACAGATCAAGTGCTAGCGGCATCAGCTCAAGGCATGTCAATCGGGATCAACTACGGGCAGATCGCGGACAACCTCCCTTCTCCGACCAGGGTCTCGGGTCTCCTCCGGTCAATGCAGATCAGCAAGGTGAAGCTCTACGACGCCGACCAGAACGTCCTGAGCGCGTTCCTCGACACGGGCGTGGAGTTCGTCGTCGGCATCGGCAACGAGAACGTGTCGGCGATGGTGGACCCGGCGGCGGCGCAGGCGTGGGTGCAGCAGCACGTCCGCCCCTACCTCCCGAGCGCGCGCATCACCTGCATCACCGTCGGGAACGAGGTGTTCAAGGGCAACGACACCGCGCTCAAGGCCAACCTCCTGCCGGCGATGCAGTCCGTGTACAACGCCGTCGTCGCGCTCGGGCTGCAGGGCCAGGTGAACGTCACGACGGCGCACTCCCTGGACATCATGGGCAGCTCCTACCCTCCCTCCGCCGGCGCGTTCCGGCCCGACGCCGTGCCGTACATCCAGCCGCTGCTCAACTTCCTGTCCATGGCGGGGTCCCCGTTCCTGATCAACTGCTACCCGTACTTCGCCTACAAGGCCGACCCGGGCAGCGTGCCGCTGGAGTACGTCCTCTTCCAGCCCAACGCCGGCGTGACCGACCCAAACACGAAGCTCAACTACGACAACATGCTGTACGCCCAGATCGACTCAGTGTACGCCGCGATGCAGGCGCTGGGCCACACCGACGTCGACGTGAAGATCTCCGAGACCGGGTGGCCGTCCAGGGGCGACCCCGACGAGGCCGGCGCGACGCCGGAGTACGCCGGGATCTACATCGGCAACCTCCTGCGGAGGATCGAGATGAAGCAGGGGACGCCGCTGAGGCCGTCGTCGCCCATCGACGTCTACGTCTTTGCGCTGTTCAACGAGAACCTCAAGCCGGGGCCGGCATCCGAGCGGAACTACGGGCTGTTCTACCCCGACGGCACGCCGGTCTACGACGTCGGCCTGCGCGGGTATCTCCCGCCGATGGACGAATCGAAAAGCGCGCGAAAGGCGGTTTCAGTGTTAGCTCTCATCGCCATTGCATCGATCACTCTCATCTTATCCTGAGAGTATATACTTTTGTCCAGTTCAGTAAAGTAGAGTAAAGGTGCAGCATCTCTTGCTGCTGAAGATTCCCATAGAAGAAAGCAAGGTAAGATAGTTGGAAGACAACCAGCATTTTTATCTATGTAGTTTTTTTTTTGAGTGAATTTATCTATGTAGTGGATTCTTCATGTAGTAAAATAGCTTGTTTTGGATTAAGAAATAGAGAAAATTCTTCAAATTTGGAAGATCTAGTAAATTCTGATACTATAGTAGTTTGCCATATTAGTAGGAATTAATCACCTATATGCTCATGCCACATACTAGTATGCTCAAAGATTAACCTAATATTACATTACTCCAGGGATGCTTCGGGAGCACAAGATCATTCAGATTTCAGAACGATAGGATCGCCCATGCATTTAGTGTGTCTTTTTATTTTTATTTGATACTAGCATTTAGGGGCTAAATTTGGCACAGATAGTGATGTAGAAGTAGAAACTAACGAAAGCTTCGAGATGATACAAGTCCAGATCTGTAATATACGACCTTGGTTTGATACAATTCTTGTTGATTAATTTCTTATTGATACATTTTGATTTGTTTATGCAAACTGTATATTGTATATATCAGTGGGACAATCATCGGTACATAAGTTCAGAGAGATATTTGTAGTATTGTACATATTATGTGGCCCTTTTCGATGTGTAATAATTTTGATCTGAGAGTTTCAGGGCGTAGTACTCGTGCAGACAG--GTGTGTGTATAGTACAGTAGTACATGTGTGATTATAAAAGTTGCAAAATTGTAACCTAATTAATACCCCCTATGTTTCAACATTTTTACTTATTATCCCACACATATCAATAAGAAACCAA]

[+] EMBL AK121151             [GCTGCTACCACCACAAACATTCTACCGCGGGACACACACTCGTCTTTACCACACAACACGAGCACGCGCGCGAGAGAGAAAGGGGGAGATAAGAGCAGTTTGACTTCGAGCTTCAACCACAGCCGAGTGATCCATGGCGGCAGGGGAGCAACCGGGAACTGGGTCGCCGCCGCAGCCGTCGACCCGCCTCTTCCTCCTCGTCCTCGCAGTCATCCTCACAGATCAAGTGCTAGCGGCATCAGCTCAAGGCATGTCAATCGGGATCAACTACGGGCAGATCGCGGACAACCTCCCTTCTCCGACCAGGGTCTCGGGTCTCCTCCGGTCAATGCAGATCAGCAAGGTGAAGCTCTACGACGCCGACCAGAACGTCCTGAGCGCGTTCCTCGACACGGGCGTGGAGTTCGTCGTCGGCATCGGCAACGAGAACGTGTCGGCGATGGTGGACCCGGCGGCGGCGCAGGCGTGGGTGCAGCAGCACGTCCGCCCCTACCTCCCGAGCGCGCGCATCACCTGCATCACCGTCGGGAACGAGGTGTTCAAGGGCAACGACACCGCGCTCAAGGCCAACCTCCTGCCGGCGATGCAGTCCGTGTACAACGCCGTCGTCGCGCTCGGGCTGCAGGGCCAGGTGAACGTCACGACGGCGCACTCCCTGGACATCATGGGCAGCTCCTACCCTCCCTCCGCCGGCGCGTTCCGGCCCGACGCCGTGCCGTACATCCAGCCGCTGCTCAACTTCCTGTCCATGGCGGGGTCCCCGTTCCTGATCAACTGCTACCCGTACTTCGCCTACAAGGCCGACCCGGGCAGCGTGCCGCTGGAGTACGTCCTCTTCCAGCCCAACGCCGGCGTGACCGACCCAAACACGAAGCTCAACTACGACAACATGCTGTACGCCCAGATCGACTCAGTGTACGCCGCGATGCAGGCGCTGGGCCACACCGACGTCGACGTGAAGATCTCCGAGACCGGGTGGCCGTCCAGGGGCGACCCCGACGAGGCCGGCGCGACGCCGGAGTACGCCGGGATCTACATCGGCAACCTCCTGCGGAGGATCGAGATGAAGCAGGGGACGCCGCTGAGGCCGTCGTCGCCCATCGACGTCTACGTCTTTGCGCTGTTCAACGAGAACCTCAAGCCGGGGCCGGCATCCGAGCGGAACTACGGGCTGTTCTACCCCGACGGCACGCCGGTCTACGACGTCGGCCTGCGCGGGTATCTCCCGCCGATGGACGAATCGAAAAGCGCGCGAAAGGCGGTTTCAGTGTTAGCTCTCATCGCCATTGCATCGATCACTCTCATCTTATCCTGAGAGTATATACTTTTGTCCAGTTCAGTAAAGTAGAGTAAAGGTGCAGCATCTCTTGCTGCTGAAGATTCCCATAGAAGAAAGCAAGGTAAGATAGTTGGAAGACAACCAGCATTTTTATCTATGTAGTTTTTTTTTTGAGTGAATTTATCTATGTAGTGGATTCTTCATGTAGTAAAATAGCTTGTTTTGGATTAAGAAATAGAGAAAATTCTTCAAATTTGGAAGATCTAGTAAATTCTGATACTATAGTAGTTTGCCATATTAGTAGGAATTAATCACCTATATGCTCATGCCACATACTAGTATGCTCAAAGATTAACCTAATATTACATTACTCCAGGGATGCTTCGGGAGCACAAGATCATTCAGATTTCAGAACGATAGGATCGCCCATGCATTTAGTGTGTCTTTTTATTTTTATTTGATACTAGCATTTAGGGGCTAAATTTGGCACAGATAGTGATGTAGAAGTAGAAACTAACGAAAGCTTCGAGATGATACAAGTCCAGATCTGTAATATACGACCTTGGTTTGATACAATTCTTGTTGATTAATTTCTTATTGATACATTTTGATTTGTTTATGCAAACTGTATATTGTATATATCAGTGGGACAATCATCGGTACATAAGTTCAGAGAGATATTT                                                                                                                                                                                                                ]
[+] EMBL CA761124             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTTTTTTTTTAAGTGAATTTATCTATGCAGTGGATTCTTCATGTAGTAAAATAGCTTGTTTTGGATTAAGAAATAGAGAAAATTCTTCAAATTTGGAAGATCTAGTAAATTCTGATACTATAGTAGTTTGCCATATTAGTAGGAATTAATCACCTATATGCTCATGCCACATACTAGTATGCTCAAAGATTAACCTAATATTACATTACTCCAGGGATGCTTCGGGAGCACAAGATCATTCAGATTTCAGAACGATAGGATCGCCCATGCATTTAGTGTGTCTTTTTATTTTTATTTGATACTAGCATTTAGGGGCTAAATTTGGCACAGATAGTGATGTAGAAGTAGAAACTAACGAAAGCTTCGAGATGATACAAGTCCAGATCTGTAATATACGACCTTGGTTTGATACAATTCTTGTTGATTAATTTCTTATTGATACATTTTGATTTGTTTATGCAAACTGTATATTGTATATATCAGTGGGACAATCATCGGTACATAAGTTCAGAGAGATATTTGTAGTATTGTACATATTATGTGGCCCTTTTCGATGTGTAATAATTTTGATCTGAGAGTTTCAGGGCGTAGTACTCGTGCAGACAGGTGTGTGTGTATAGTACAGTAGTACATGTGTGATTATAAAAGTTGCAAAATTGTAACCTAATTAATACCCCCTATGTTTCAACATTTTT                                  ]
[-] EMBL CA766336             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGATCTAGTAAATTCTGATACTATAGTAGTTTGCCATATTAGTAGGAATTAATCACCTATATGCTCATGCCACATACTAGTATGCTCAAAGATTAACCTAATATTACATTACTCCAGGGATGCTTCGGGAGCACAAGATCATTCAGATTTCAGAACGATAGGATCGCCCATGCATTTAGTGTGTCTTTTTATTTTTATTTGATACTAGCATTTAGGGGCTAAATTTGGCACAGATAGTGATGTAGAAGTAGAAACTAACGAAAGCTTCGAGATGATACAAGTCCAGATCTGTAATATACGACCTTGGTTTGATACAATTCTTGTTGATTAATTTCTTATTGATACATTTTGATTTGTTTATGCAAACTGTATATTGTATATATCAGTGGGACAATCATCGGTACATAAGTTCAGAGAGATATTTGTAGTATTGTACATATTATGTGGCCCTTTTCGATGTGTAATAATTTTGATCTGAGAGTTTCAGGGCGTAGTACTCGTGCAGACAG  GTGTGTGTATAGTACAGTAGTACATGTGTGATTATAAAAGTTGCAAAATTGTAACCTAATTAATACCCCCTATGTTTCAACATTTTTACTTATTATCCCACACATATCAATAAGAAACCAA]


>consensus_11376#0 GCTGCTACCACCACAAACATTCTACCGCGGGACACACACTCGTCTTTACCACACAACACG AGCACGCGCGCGAGAGAGAAAGGGGGAGATAAGAGCAGTTTGACTTCGAGCTTCAACCAC AGCCGAGTGATCCATGGCGGCAGGGGAGCAACCGGGAACTGGGTCGCCGCCGCAGCCGTC GACCCGCCTCTTCCTCCTCGTCCTCGCAGTCATCCTCACAGATCAAGTGCTAGCGGCATC AGCTCAAGGCATGTCAATCGGGATCAACTACGGGCAGATCGCGGACAACCTCCCTTCTCC GACCAGGGTCTCGGGTCTCCTCCGGTCAATGCAGATCAGCAAGGTGAAGCTCTACGACGC CGACCAGAACGTCCTGAGCGCGTTCCTCGACACGGGCGTGGAGTTCGTCGTCGGCATCGG CAACGAGAACGTGTCGGCGATGGTGGACCCGGCGGCGGCGCAGGCGTGGGTGCAGCAGCA CGTCCGCCCCTACCTCCCGAGCGCGCGCATCACCTGCATCACCGTCGGGAACGAGGTGTT CAAGGGCAACGACACCGCGCTCAAGGCCAACCTCCTGCCGGCGATGCAGTCCGTGTACAA CGCCGTCGTCGCGCTCGGGCTGCAGGGCCAGGTGAACGTCACGACGGCGCACTCCCTGGA CATCATGGGCAGCTCCTACCCTCCCTCCGCCGGCGCGTTCCGGCCCGACGCCGTGCCGTA CATCCAGCCGCTGCTCAACTTCCTGTCCATGGCGGGGTCCCCGTTCCTGATCAACTGCTA CCCGTACTTCGCCTACAAGGCCGACCCGGGCAGCGTGCCGCTGGAGTACGTCCTCTTCCA GCCCAACGCCGGCGTGACCGACCCAAACACGAAGCTCAACTACGACAACATGCTGTACGC CCAGATCGACTCAGTGTACGCCGCGATGCAGGCGCTGGGCCACACCGACGTCGACGTGAA GATCTCCGAGACCGGGTGGCCGTCCAGGGGCGACCCCGACGAGGCCGGCGCGACGCCGGA GTACGCCGGGATCTACATCGGCAACCTCCTGCGGAGGATCGAGATGAAGCAGGGGACGCC GCTGAGGCCGTCGTCGCCCATCGACGTCTACGTCTTTGCGCTGTTCAACGAGAACCTCAA GCCGGGGCCGGCATCCGAGCGGAACTACGGGCTGTTCTACCCCGACGGCACGCCGGTCTA CGACGTCGGCCTGCGCGGGTATCTCCCGCCGATGGACGAATCGAAAAGCGCGCGAAAGGC GGTTTCAGTGTTAGCTCTCATCGCCATTGCATCGATCACTCTCATCTTATCCTGAGAGTA TATACTTTTGTCCAGTTCAGTAAAGTAGAGTAAAGGTGCAGCATCTCTTGCTGCTGAAGA TTCCCATAGAAGAAAGCAAGGTAAGATAGTTGGAAGACAACCAGCATTTTTATCTATGTA GTTTTTTTTTTGAGTGAATTTATCTATGTAGTGGATTCTTCATGTAGTAAAATAGCTTGT TTTGGATTAAGAAATAGAGAAAATTCTTCAAATTTGGAAGATCTAGTAAATTCTGATACT ATAGTAGTTTGCCATATTAGTAGGAATTAATCACCTATATGCTCATGCCACATACTAGTA TGCTCAAAGATTAACCTAATATTACATTACTCCAGGGATGCTTCGGGAGCACAAGATCAT TCAGATTTCAGAACGATAGGATCGCCCATGCATTTAGTGTGTCTTTTTATTTTTATTTGA TACTAGCATTTAGGGGCTAAATTTGGCACAGATAGTGATGTAGAAGTAGAAACTAACGAA AGCTTCGAGATGATACAAGTCCAGATCTGTAATATACGACCTTGGTTTGATACAATTCTT GTTGATTAATTTCTTATTGATACATTTTGATTTGTTTATGCAAACTGTATATTGTATATA TCAGTGGGACAATCATCGGTACATAAGTTCAGAGAGATATTTGTAGTATTGTACATATTA TGTGGCCCTTTTCGATGTGTAATAATTTTGATCTGAGAGTTTCAGGGCGTAGTACTCGTG CAGACAGGTGTGTGTATAGTACAGTAGTACATGTGTGATTATAAAAGTTGCAAAATTGTA ACCTAATTAATACCCCCTATGTTTCAACATTTTTACTTATTATCCCACACATATCAATAA GAAACCAA



consensusID : consensus_11376#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1579
fasta sequence
                              [CCCCGATCCATCCAAATTCCAAGACAAGCTCCTCGTGCTTTCCTGCCTTGCCGCTGCGTCGCTCTCGCTCTCCACGGCACGCGCACGCAACGCGCGACGCGGTCCGGCGCTAGCTGAGCTGTGACTAGCCGAGCAAACACCCGCGGCTCGCCACCCCGACGGTTACCGCCGCGCGCCACCCCCCACCCGCACTGCATAAAAACGCCCCACCTCCGCCGAATCGCCGATCCGCGCGCTGCTACCACCACAAACATTCTACCGCGGGACACACACTCGTCTTTACCACACAACACGAGCACGCGCGCGAGAGAGAAAGGGGGAGATAAGAGCAGTTTGACTTCGAGCTTCAACCACAGCCGAGTGATCCATGGCGGCAGGGGAGCAACCGGGAACTGGGTCGCCGCCGCAGCCGTCGACCCGCCTCTTCCTCCTCGTCCTCGCAGTCATCCTCACAGATCAAGTGCTAGCGGCATCAGCTCAAGGCATGTCAATCGGGATCAACTACGGGCAGATCGCGGACAACCTCCCTTCTCCGACCAGGGTCTCGGGTCTCCTCCGGTCAATGCAGATCAGCAAGGTGAAGCTCTACGACGCCGACCAGAACGTCCTGAGCGCGTTCCTCGACACGGGCGTGGAGTTCGTCGTCGGCATCGGCAACGAGAACGTGTCGGCGATGGTGGACCCGGCGGCGGCGCAGGCGTGGGTGCAGCAGCACGTCCGCCCCTACCTCCCGAGCGCGCGCATCACCTGCATCACCGTCGGGAACGAGGTGTTCAAGGGCAACGACACCGCGCTCAAGGCCAACCTCCTGCCGGCGATGCAGTCCGTGTACAACGCCGTCGTCGCGCTCGGGCTGCAGGGCCAGGTGAACGTCACGACGGCGCACTCCCTGGACATCATGGGCAGCTCCTACCCTCCCTCCGCCGGCGCGTTCCGGCCCGACGCCGTGCCGTACATCCAGCCGCTGCTCAACTTCCTGTCCATGGCGGGGTCCCCGTTCCTGATCAACTGCTACCCGTACTTCGCCTACAAGGCCGACCCGGGCAGCGTGCCGCTGGAGTACGTCCTCTTCCAGCCCAACGCCGGCGTGACCGACCCAAACACGAAGCTCAACTACGACAACATGCTGTACGCCCAGATCGACTCAGTGTACGCCGCGATGCAGGCGCTGGGCCACACCGACGTCGACGTGAAGATCTCCGAGACCGGGTGGCCGTCCAGGGGCGACCCCGACGAGGCCGGCGCGACGCCGGAGTACGCCGGGATCTACATCGGCAACCTCCTGCGGAGGATCGAGATGAAGCAGGGGACGCCGCTGAGGCCGTCGTCGCCCATCGACGTCTACGTCTTTGCGCTGTTCAACGAGAACCTCAAGCCGGGGCCGGCATCCGAGCGGAACTACGGGCTGTTCTACCCCGACGGCACGCCGGTCTACGACGTCGGCCTGCGCGGGTATCTCCCGCCGATGGACGAATCGAAAAGCGCGCGAAAGGTAGGCGGTGTGAACTGTGAACTCGATCGTTTTTTTCTCCTTCAAAATCTGCAAAACTGTTACAAACTTTCTGCTGCATGTCACGCA]

[+] EMBL AK110902             [CCCCGATCCATCCAAATTCCAAGACAAGCTCCTCGTGCTTTCCTGCCTTGCCGCTGCGTCGCTCTCGCTCTCCACGGCACGCGCACGCAACGCGCGACGCGGTCCGGCGCTAGCTGAGCTGTGACTAGCCGAGCAAACACCCGCGGCTCGCCACCCCGACGGTTACCGCCGCGCGCCACCCCCCACCCGCACTGCATAAAAACGCCCCACCTCCGCCGAATCGCCGATCCGCGCGCTGCTACCACCACAAACATTCTACCGCGGGACACACACTCGTCTTTACCACACAACACGAGCACGCGCGCGAGAGAGAAAGGGGGAGATAAGAGCAGTTTGACTTCGAGCTTCAACCACAGCCGAGTGATCCATGGCGGCAGGGGAGCAACCGGGAACTGGGTCGCCGCCGCAGCCGTCGACCCGCCTCTTCCTCCTCGTCCTCGCAGTCATCCTCACAGATCAAGTGCTAGCGGCATCAGCTCAAGGCATGTCAATCGGGATCAACTACGGGCAGATCGCGGACAACCTCCCTTCTCCGACCAGGGTCTCGGGTCTCCTCCGGTCAATGCAGATCAGCAAGGTGAAGCTCTACGACGCCGACCAGAACGTCCTGAGCGCGTTCCTCGACACGGGCGTGGAGTTCGTCGTCGGCATCGGCAACGAGAACGTGTCGGCGATGGTGGACCCGGCGGCGGCGCAGGCGTGGGTGCAGCAGCACGTCCGCCCCTACCTCCCGAGCGCGCGCATCACCTGCATCACCGTCGGGAACGAGGTGTTCAAGGGCAACGACACCGCGCTCAAGGCCAACCTCCTGCCGGCGATGCAGTCCGTGTACAACGCCGTCGTCGCGCTCGGGCTGCAGGGCCAGGTGAACGTCACGACGGCGCACTCCCTGGACATCATGGGCAGCTCCTACCCTCCCTCCGCCGGCGCGTTCCGGCCCGACGCCGTGCCGTACATCCAGCCGCTGCTCAACTTCCTGTCCATGGCGGGGTCCCCGTTCCTGATCAACTGCTACCCGTACTTCGCCTACAAGGCCGACCCGGGCAGCGTGCCGCTGGAGTACGTCCTCTTCCAGCCCAACGCCGGCGTGACCGACCCAAACACGAAGCTCAACTACGACAACATGCTGTACGCCCAGATCGACTCAGTGTACGCCGCGATGCAGGCGCTGGGCCACACCGACGTCGACGTGAAGATCTCCGAGACCGGGTGGCCGTCCAGGGGCGACCCCGACGAGGCCGGCGCGACGCCGGAGTACGCCGGGATCTACATCGGCAACCTCCTGCGGAGGATCGAGATGAAGCAGGGGACGCCGCTGAGGCCGTCGTCGCCCATCGACGTCTACGTCTTTGCGCTGTTCAACGAGAACCTCAAGCCGGGGCCGGCATCCGAGCGGAACTACGGGCTGTTCTACCCCGACGGCACGCCGGTCTACGACGTCGGCCTGCGCGGGTATCTCCCGCCGATGGACGAATCGAAAAGCGCGCGAAAGGTAGGCGGTGTGAACTGTGAACTCGATCGTTTTTTTCTCCTTCAAAATCTGCAAAACTGTTACAAACTTTCTGCTGCATGTCACGCA]


>consensus_11376#1 CCCCGATCCATCCAAATTCCAAGACAAGCTCCTCGTGCTTTCCTGCCTTGCCGCTGCGTC GCTCTCGCTCTCCACGGCACGCGCACGCAACGCGCGACGCGGTCCGGCGCTAGCTGAGCT GTGACTAGCCGAGCAAACACCCGCGGCTCGCCACCCCGACGGTTACCGCCGCGCGCCACC CCCCACCCGCACTGCATAAAAACGCCCCACCTCCGCCGAATCGCCGATCCGCGCGCTGCT ACCACCACAAACATTCTACCGCGGGACACACACTCGTCTTTACCACACAACACGAGCACG CGCGCGAGAGAGAAAGGGGGAGATAAGAGCAGTTTGACTTCGAGCTTCAACCACAGCCGA GTGATCCATGGCGGCAGGGGAGCAACCGGGAACTGGGTCGCCGCCGCAGCCGTCGACCCG CCTCTTCCTCCTCGTCCTCGCAGTCATCCTCACAGATCAAGTGCTAGCGGCATCAGCTCA AGGCATGTCAATCGGGATCAACTACGGGCAGATCGCGGACAACCTCCCTTCTCCGACCAG GGTCTCGGGTCTCCTCCGGTCAATGCAGATCAGCAAGGTGAAGCTCTACGACGCCGACCA GAACGTCCTGAGCGCGTTCCTCGACACGGGCGTGGAGTTCGTCGTCGGCATCGGCAACGA GAACGTGTCGGCGATGGTGGACCCGGCGGCGGCGCAGGCGTGGGTGCAGCAGCACGTCCG CCCCTACCTCCCGAGCGCGCGCATCACCTGCATCACCGTCGGGAACGAGGTGTTCAAGGG CAACGACACCGCGCTCAAGGCCAACCTCCTGCCGGCGATGCAGTCCGTGTACAACGCCGT CGTCGCGCTCGGGCTGCAGGGCCAGGTGAACGTCACGACGGCGCACTCCCTGGACATCAT GGGCAGCTCCTACCCTCCCTCCGCCGGCGCGTTCCGGCCCGACGCCGTGCCGTACATCCA GCCGCTGCTCAACTTCCTGTCCATGGCGGGGTCCCCGTTCCTGATCAACTGCTACCCGTA CTTCGCCTACAAGGCCGACCCGGGCAGCGTGCCGCTGGAGTACGTCCTCTTCCAGCCCAA CGCCGGCGTGACCGACCCAAACACGAAGCTCAACTACGACAACATGCTGTACGCCCAGAT CGACTCAGTGTACGCCGCGATGCAGGCGCTGGGCCACACCGACGTCGACGTGAAGATCTC CGAGACCGGGTGGCCGTCCAGGGGCGACCCCGACGAGGCCGGCGCGACGCCGGAGTACGC CGGGATCTACATCGGCAACCTCCTGCGGAGGATCGAGATGAAGCAGGGGACGCCGCTGAG GCCGTCGTCGCCCATCGACGTCTACGTCTTTGCGCTGTTCAACGAGAACCTCAAGCCGGG GCCGGCATCCGAGCGGAACTACGGGCTGTTCTACCCCGACGGCACGCCGGTCTACGACGT CGGCCTGCGCGGGTATCTCCCGCCGATGGACGAATCGAAAAGCGCGCGAAAGGTAGGCGG TGTGAACTGTGAACTCGATCGTTTTTTTCTCCTTCAAAATCTGCAAAACTGTTACAAACT TTCTGCTGCATGTCACGCA



consensusID : consensus_11376#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1176
fasta sequence
                              [GCCTATCCAAGTGGAACGCAACAGAGGCGTCGTCTCCTCCTCTCCTCGACCTCTCGCGGTTGGAGGTCTCGCGCGCGCGTGAGGCAACAAGTGCCCGTTCGATCGACCGGCAAGGATGGCGACGGCAGCGAGAGCGGCGTCGTGCACCCCCGCCGCTTGCGCTGTGTTGGTCATCCCCATCCTAGTCCTGATCATGGCAGGGCAAGTGCGAGTCGCGGAGGCGCTGTCCATCGGCGTGAACTACGGGCAGATCGCGAACAACATCCCGTCGCCGTCGCGGGTGTCGTGGCTGCTCCGGTCGCTCAAGATCAGCAAGGTGAAGCTGTTCGACGCCGACCCGCACGTCCTGCGCGCGTTCCTCGGCACGGGCGTGGAGTTCGTGGTCGGCATCGGCAACGAGGCCGTCCCGGCGATGGCCAGCCCCGCGGCGGCGGAGTCGTGGCTGCAGCTGCACGTGGTGCCGCACCTCCGCGCCGGCGCGCGCATCACCTGCATCACCGTCGGCAACGAGGTGTTCAAGGGCAACGACACCGCCCTCCAGGCCAGCCTCCTCCCGGCGTTGCGGTCCGTGCACCAGGCGCTCGGCGCGCTCGGCCTCCAGGGCCGCGTCAACGTCACCACCGCGCACTCGCTGGACATCATGGGCGTGTCCTACCCGCCGTCCGCCGGTGCGTTCCACCCCTCCGCCGCGCCGCACCTGCAGCCGTTCCTGGCCTTCCTGTCGGCGGCGAGGGCGCCGTTCCTCATCAACTGCTACCCGTACTTCGCCTACAAGGACGACCCGGCGCGCGTGCCGCTGGAGTACGTGCTGTTCCAGCCCAACGCCGGCGTCGTCGACCCGCGCACGAGGCTCGTCTACGACAACATGCTGTACGCGCAGGTGGACGCCGTGTACGCGGCGATCCAGGCGATGGGGCACACGGACATCGACGTGAAGGTGTCGGAGACCGGGTGGCCGTCCCGCGGCGACCCCGACGAGGCCGGCGCGACGCCCGAGAACGCCGGGACGTACATCGGGAACCTCCTCCGGAGGATCGAGATGAAGCAGGGCACGCCGCTGCGGCCGCAGGCGCCCATCGACGTCTACGTCTTCGCGCTCTTCAACGAGAACCTCAAGCCCGGCCCGGCGTCGGAGCGGAACTACGGCCTCTTCTACCCCGACGGCACGCCGGTCTA]

[+] EMBL AK073663             [GCCTATCCAAGTGGAACGCAACAGAGGCGTCGTCTCCTCCTCTCCTCGACCTCTCGCGGTTGGAGGTCTCGCGCGCGCGTGAGGCAACAAGTGCCCGTTCGATCGACCGGCAAGGATGGCGACGGCAGCGAGAGCGGCGTCGTGCACCCCCGCCGCTTGCGCTGTGTTGGTCATCCCCATCCTAGTCCTGATCATGGCAGGGCAAGTGCGAGTCGCGGAGGCGCTGTCCATCGGCGTGAACTACGGGCAGATCGCGAACAACATCCCGTCGCCGTCGCGGGTGTCGTGGCTGCTCCGGTCGCTCAAGATCAGCAAGGTGAAGCTGTTCGACGCCGACCCGCACGTCCTGCGCGCGTTCCTCGGCACGGGCGTGGAGTTCGTGGTCGGCATCGGCAACGAGGCCGTCCCGGCGATGGCCAGCCCCGCGGCGGCGGAGTCGTGGCTGCAGCTGCACGTGGTGCCGCACCTCCGCGCCGGCGCGCGCATCACCTGCATCACCGTCGGCAACGAGGTGTTCAAGGGCAACGACACCGCCCTCCAGGCCAGCCTCCTCCCGGCGTTGCGGTCCGTGCACCAGGCGCTCGGCGCGCTCGGCCTCCAGGGCCGCGTCAACGTCACCACCGCGCACTCGCTGGACATCATGGGCGTGTCCTACCCGCCGTCCGCCGGTGCGTTCCACCCCTCCGCCGCGCCGCACCTGCAGCCGTTCCTGGCCTTCCTGTCGGCGGCGAGGGCGCCGTTCCTCATCAACTGCTACCCGTACTTCGCCTACAAGGACGACCCGGCGCGCGTGCCGCTGGAGTACGTGCTGTTCCAGCCCAACGCCGGCGTCGTCGACCCGCGCACGAGGCTCGTCTACGACAACATGCTGTACGCGCAGGTGGACGCCGTGTACGCGGCGATCCAGGCGATGGGGCACACGGACATCGACGTGAAGGTGTCGGAGACCGGGTGGCCGTCCCGCGGCGACCCCGACGAGGCCGGCGCGACGCCCGAGAACGCCGGGACGTACATCGGGAACCTCCTCCGGAGGATCGAGATGAAGCAGGGCACGCCGCTGCGGCCGCAGGCGCCCATCGACGTCTACGTCTTCGCGCTCTTCAACGAGAACCTCAAGCCCGGCCCGGCGTCGGAGCGGAACTACGGCCTCTTCTACCCCGACGGCACGCCGGTCTA]
[+] EMBL AK072635             [                                                                                                                                                                                                                                                                                                                                                                     CCTCGGCACGGGCGTGGAGTTCGTGGTCGGCATCGGCAACGAGGCCGTCCCGGCGATGGCCAGCCCCGCGGCGGCGGAGTCGTGGCTGCAGCTGCACGTGGTGCCGCACCTCCGCGCCGGCGCGCGCATCACCTGCATCACCGTCGGCAACGAGGTGTTCAAGGGCAACGACACCGCCCTCCAGGCCAGCCTCCTCCCGGCGTTGCGGTCCGTGCACCAGGCGCTCGGCGCGCTCGGCCTCCAGGGCCGCGTCAACGTCACCACCGCGCACTCGCTGGACATCATGGGCGTGTCCTACCCGCCGTCCGCCGGTGCGTTCCACCCCTCCGCCGCGCCGCACCTGCAGCCGTTCCTGGCCTTCCTGTCGGCGGCGAGGGCGCCGTTCCTCATCAACTGCTACCCGTACTTCGCCTACAAGGACGACCCGGCGCGCGTGCCGCTGGAGTACGTGCTGTTCCAGCCCAACGCCGGCGTCGTCGACCCGCGCACGAGGCTCGTCTACGACAACATGCTGTACGCGCAGGTGGACGCCGTGTACGCGGCGATCCAGGCGATGGGGCACACGGACATCGACGTGAAGGTGTCGGAGACCGGGTGGCCGTCCCGCGGCGACCCCGACGAGGCCGGCGCGACGCCCGAGAACGCCGGGACGTACATCGGGAACCTCCTCCGGAGGATCGAGATGAAGCAGGGCACGCCGCTGCGGCCGCAGGCGCCCATCGACGTCTACGTCTTCGCGCTCTTCAACGAGAACCTCAAGCCCGGCCCGGCGTCGGAGCGGAACTACGGCCTCTTCTACCCCGACGGCACGCCGGTCTA]


>consensus_11376#2 GCCTATCCAAGTGGAACGCAACAGAGGCGTCGTCTCCTCCTCTCCTCGACCTCTCGCGGT TGGAGGTCTCGCGCGCGCGTGAGGCAACAAGTGCCCGTTCGATCGACCGGCAAGGATGGC GACGGCAGCGAGAGCGGCGTCGTGCACCCCCGCCGCTTGCGCTGTGTTGGTCATCCCCAT CCTAGTCCTGATCATGGCAGGGCAAGTGCGAGTCGCGGAGGCGCTGTCCATCGGCGTGAA CTACGGGCAGATCGCGAACAACATCCCGTCGCCGTCGCGGGTGTCGTGGCTGCTCCGGTC GCTCAAGATCAGCAAGGTGAAGCTGTTCGACGCCGACCCGCACGTCCTGCGCGCGTTCCT CGGCACGGGCGTGGAGTTCGTGGTCGGCATCGGCAACGAGGCCGTCCCGGCGATGGCCAG CCCCGCGGCGGCGGAGTCGTGGCTGCAGCTGCACGTGGTGCCGCACCTCCGCGCCGGCGC GCGCATCACCTGCATCACCGTCGGCAACGAGGTGTTCAAGGGCAACGACACCGCCCTCCA GGCCAGCCTCCTCCCGGCGTTGCGGTCCGTGCACCAGGCGCTCGGCGCGCTCGGCCTCCA GGGCCGCGTCAACGTCACCACCGCGCACTCGCTGGACATCATGGGCGTGTCCTACCCGCC GTCCGCCGGTGCGTTCCACCCCTCCGCCGCGCCGCACCTGCAGCCGTTCCTGGCCTTCCT GTCGGCGGCGAGGGCGCCGTTCCTCATCAACTGCTACCCGTACTTCGCCTACAAGGACGA CCCGGCGCGCGTGCCGCTGGAGTACGTGCTGTTCCAGCCCAACGCCGGCGTCGTCGACCC GCGCACGAGGCTCGTCTACGACAACATGCTGTACGCGCAGGTGGACGCCGTGTACGCGGC GATCCAGGCGATGGGGCACACGGACATCGACGTGAAGGTGTCGGAGACCGGGTGGCCGTC CCGCGGCGACCCCGACGAGGCCGGCGCGACGCCCGAGAACGCCGGGACGTACATCGGGAA CCTCCTCCGGAGGATCGAGATGAAGCAGGGCACGCCGCTGCGGCCGCAGGCGCCCATCGA CGTCTACGTCTTCGCGCTCTTCAACGAGAACCTCAAGCCCGGCCCGGCGTCGGAGCGGAA CTACGGCCTCTTCTACCCCGACGGCACGCCGGTCTA



consensusID : consensus_11376#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 624
fasta sequence
                              [CCGGGATCTACATCGGCAACCTCCTGCGGAGGATCGAGATGAAGCAGGGGACGCCGCTGAGGCCGTCGTCGCCCATCGACGTCTACGTCTTTGCGCTGTTCAACGAGAACCTCAAGCCGGGGCCGGCATCCGAGCGGAACTACGGGCTGTTCTACCCCGACGGCACGCCGGTCTACGACGTCGGCCTGCGCGGGTATCTCCCGCCGATGGACGAATCGAAAAGCGCGCGAAAGGCGGTTTCAGTGTTAGCTCTCATCGCCATTGCATCGATCACTCTCATCTTATCCTGAGAGTATATACTTTTGTCCAGTTCAGTAAAGTAGAGTAAAGGTGCAGCATCTCTTGCTGCTGAAGATTCCCATAGAAGAAAGCAAGGGATGCTTCGGGAGCACAAGATCATTCAGATTTCAGAACGATAGGATCGCCCATGCATTTAGTGTGTCTTTTTATTTTTATTTGATACTAGCATTTAGGGGCTAAATTTGGCACAGATAGTGATGTAGAAGTAGAAACTAACGAAAGCTTCGAGATGATACAAGTCCAGATCTGTAATATACGACCTTGGTTTGATACAATTCTTGTTGATTAATTTCTTATTGATACATTTTGATTTGTTTAAAAAAA]

[+] EMBL AU174632             [CCGGGATCTACATCGGCAACCTCCTGCGGAGGATCGAGATGAAGCAGGGGACGCCGCTGAGGCCGTCGTCGCCCATCGACGTCTACGTCTTTGCGCTGTTCAACGAGAACCTCAAGCCGGGGCCGGCATCCGAGCGGAACTACGGGCTGTTCTACCCCGACGGCACGCCGGTCTACGACGTCGGCCTGCGCGGGTATCTCCCGCCGATGGACGAATCGAAAAGCGCGCGAAAGGCGGTTTCAGTGTTAGCTCTCATCGCCATTGCATCGATCACTCTCATCTTATCCTGAGAGTATATACTTTTGTCCAGTTCAGTAAAGTAGAGTAAAGGTGCAGCATCTCTTGCTGCTGAAGATTCCCATAGAAGAAAGCAAGGGATGCTTCGGGAGCACAAGATCATTCAGATTTCAGAACGATAGGATCGCCCATGCATTTAGTGTGTCTTTTTAT                                                                                                                                                                              ]
[+] EMBL AU174633             [                                                                                                                                                                                                                               CGCGCGAAAGGCGGTTTCAGTGTTAGCTCTCATCGCCATTGCATCGATCACTCTCATCTTATCCTGAGAGTATATACTTTTGTCCAGTTCAGTAAAGTAGAGTAAAGGTGCAGCATCTCTTGCTGCTGAAGATTCCCATAGAAGAAAGCAAGGGATGCTTCGGGAGCACAAGATCATTCAGATTTCAGAACGATAGGATCGCCCATGCATTTAGTGTGTCTTTTTATTTTTATTTGATACTAGCATTTAGGGGCTAAATTTGGCACAGATAGTGATGTAGAAGTAGAAACTAACGAAAGCTTCGAGATGATACAAGTCCAGATCTGTAATATACGACCTTGGTTTGATACAATTCTTGTTGATTAATTTCTTATTGATACATTTTGATTTGTTTAAAAAAA]


>consensus_11376#3 CCGGGATCTACATCGGCAACCTCCTGCGGAGGATCGAGATGAAGCAGGGGACGCCGCTGA GGCCGTCGTCGCCCATCGACGTCTACGTCTTTGCGCTGTTCAACGAGAACCTCAAGCCGG GGCCGGCATCCGAGCGGAACTACGGGCTGTTCTACCCCGACGGCACGCCGGTCTACGACG TCGGCCTGCGCGGGTATCTCCCGCCGATGGACGAATCGAAAAGCGCGCGAAAGGCGGTTT CAGTGTTAGCTCTCATCGCCATTGCATCGATCACTCTCATCTTATCCTGAGAGTATATAC TTTTGTCCAGTTCAGTAAAGTAGAGTAAAGGTGCAGCATCTCTTGCTGCTGAAGATTCCC ATAGAAGAAAGCAAGGGATGCTTCGGGAGCACAAGATCATTCAGATTTCAGAACGATAGG ATCGCCCATGCATTTAGTGTGTCTTTTTATTTTTATTTGATACTAGCATTTAGGGGCTAA ATTTGGCACAGATAGTGATGTAGAAGTAGAAACTAACGAAAGCTTCGAGATGATACAAGT CCAGATCTGTAATATACGACCTTGGTTTGATACAATTCTTGTTGATTAATTTCTTATTGA TACATTTTGATTTGTTTAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11376#0      GCTGCTACCACCACAAACATTCTACCGCGGGACACACACTCGTCTTTACCACACAACACG 60
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      ------------------------------------------------------------
consensus_11376#2      ------------------------------------------------------------
                                                                                   

consensus_11376#0      AGCACGCGCGCGAGAGAGAAAGGGGGAGATAAGAGCAGTTTGACTTCGAGCTTCAACCAC 120
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      ------------------------------------------------------------
consensus_11376#2      ------------------------------------------------------------
                                                                                   

consensus_11376#0      AGCCGAGTGATCCATGGCGGCAGGGGAGCAACCGGGAACTGGGTCGCCGCCGCAGCCGTC 180
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      ------------------------------------------------------------
consensus_11376#2      ------------------------------------------------------------
                                                                                   

consensus_11376#0      GACCCGCCTCTTCCTCCTCGTCCTCGCAGTCATCCTCACAGATCAAGTGCTAGCGGCATC 240
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      ------------------------------------------------------------
consensus_11376#2      ------------------------------------------------------------
                                                                                   

consensus_11376#0      AGCTCAAGGCATGTCAATCGGGATCAACTACGGGCAGATCGCGGACAACCTCCCTTCTCC 300
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      ------------------------------------------------------------
consensus_11376#2      ------------------------------------------------------------
                                                                                   

consensus_11376#0      GACCAGGGTCTCGGGTCTCCTCCGGTCAATGCAGATCAGCAAGGTGAAGCTCTACGACGC 360
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      ------------------------------------------------------------
consensus_11376#2      ------------------------------------------------------------
                                                                                   

consensus_11376#0      CGACCAGAACGTCCTGAGCGCGTTCCTCGACACGGGCGTGGAGTTCGTCGTCGGCATCGG 420
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      ------------------------------------------------------------
consensus_11376#2      ------------------------------------------------------------
                                                                                   

consensus_11376#0      CAACGAGAACGTGTCGGCGATGGTGGACCCGGCGGCGGCGCAGGCGTGGGTGCAGCAGCA 480
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      ------------------------------------------------------------
consensus_11376#2      ------------------------------------------------------------
                                                                                   

consensus_11376#0      CGTCCGCCCCTACCTCCCGAGCGCGCGCATCACCTGCATCACCGTCGGGAACGAGGTGTT 540
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      ------------------------------------------------------------
consensus_11376#2      ------------------------------------------------------------
                                                                                   

consensus_11376#0      CAAGGGCAACGACACCGCGCTCAAGGCCAACCTCCTGCCGGCGATGCAGTCCGTGTACAA 600
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      ------------------------------------------------------------
consensus_11376#2      ------------------------------------------------------------
                                                                                   

consensus_11376#0      CGCCGTCGTCGCGCTCGGGCTGCAGGGCCAGGTGAACGTCACGACGGCGCACTCCCTGGA 660
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      -------------CCCCGATCCATCCAAATTCCAAGACAAGCTCCTCGTGCTTTCCTGCC 47
consensus_11376#2      ------------------------------------------------------------
                                                                                   

consensus_11376#0      CATCATGGGCAGCTCCTACCCTCCCTCCGCCGGCGCGTTCCGGCCCGACGCCGTGCCGTA 720
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      TTGCCGCTGCGTCGCTCTCGCTCTCCACGGCACGCGCACGCAACGCGCGACGCGGTCCGG 107
consensus_11376#2      ------------------------------------------------------------
                                                                                   

consensus_11376#0      CATCCAGCCGCTGCTCAACTTCCTGTCCATGGCGGGGTCCCCGTTCCTGATCAACTGCTA 780
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      CGCTAGCTGAGCTGTGACTAGCCGAGCAAACACCCGCGGCTCGCCACCCCGACGGTTACC 167
consensus_11376#2      ------------------------------------------------------------
                                                                                   

consensus_11376#0      CCCGTACTTCGCCTACAAGGCCGACCCGGGCAGCGTGCCGCTGGAGTACGTCCTCTTCCA 840
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      GCCGCGCGCCACCCCCCACCCGCACTGCATAAAAACGCCCCACCTCCGCCGAATCGCCGA 227
consensus_11376#2      -------------------------------------------------------GCCTA 5
                                                                                   

consensus_11376#0      GCCCAACGCCGGCGTGACCGACCCAAACACGAAGCTCAACTACGACAACATGCTGTACGC 900
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      TCCGCGCGCTGCTACCACCACAAACATTCTACCGCGGGACACACACTCGTCTTTACCACA 287
consensus_11376#2      TCCAAGTG----GAACGCAACAGAGGCGTCGTCTCC-----TCCTCTCCTCGACCTCTCG 56
                                                                                   

consensus_11376#0      CCAGATCGACTCAGTGTACGCCGCGATGCAGGCGCTGGGCCACACCGACGTCGACGTGAA 960
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      CAACACGAGCACGCGCGCGAGAGAGAAAGGGGGAGATAAGAGCAGTTTGACTTCGAGCTT 347
consensus_11376#2      CGGTTGGAGGTCTCGCGCGCGCGTGA-----GGCAACAAGTGC---CCG--TTCGA---T 103
                                                                                   

consensus_11376#0      GATCTCCGAGACCGGGTGGCCGTCCAGGGGCGACCCCGACGAGGCCGGCGCGACGCCGGA 1020
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      CAACCACAGCCGAGTGATCCATGGCGGCAGGGGAGCAACCGGGAACTGGGTCGCCGCCGC 407
consensus_11376#2      CGACC--GGCAAGGATGGCGACGGCAGCGAGAGCGGCGTCG-----TGCACCCCCGCCGC 156
                                                                                   

consensus_11376#0      GTACGCCGGGATCTA-CATCGGCAACCTCCTGCGGAGGATCGAGATGAAGCAGGGG-ACG 1078
consensus_11376#3      -----CCGGGATCTA-CATCGGCAACCTCCTGCGGAGGATCGAGATGAAGCAGGGG-ACG 53
consensus_11376#1      AGCCGTCGACCCGCCTCTTCCTCCTCGTCCTCGCAGTCATCCTCACAGATCAAGTGCTAG 467
consensus_11376#2      TTGCGCTGTGTTG----GTCATCCCCATCCTAGTCCTGATCATGGCAGGGCAAGTGCGAG 212
                              *          **  *  * ****       ***         ** * *   *

consensus_11376#0      CCGCTGAGGCCGTCGT--CGCCCATCGACGTCTACGTCTTTGCGCTGTTCAACGAGAACC 1136
consensus_11376#3      CCGCTGAGGCCGTCGT--CGCCCATCGACGTCTACGTCTTTGCGCTGTTCAACGAGAACC 111
consensus_11376#1      CGGCATCAGCTCAAGGCATGTCAATCGGGATCAAC---TACGGGCAGATCGCGGACAACC 524
consensus_11376#2      TCGCGGAGGCGC------TGTCCATCGGCGTGAAC---TACGGGCAGATCGCGAACAACA 263
                         **    **         * * ****   *  **   *  * ** * **    * *** 

consensus_11376#0      TCAAGCCGGGGCCGGCATCCGAGCGGAACTACGGGCTGTTCTACCCCGACGGCACGCCGG 1196
consensus_11376#3      TCAAGCCGGGGCCGGCATCCGAGCGGAACTACGGGCTGTTCTACCCCGACGGCACGCCGG 171
consensus_11376#1      TCCCTTCTCCGACCAGGGTCTCGGGTCTCCTCCGGTCAATGCAGATCAGCAAGGTGAAGC 584
consensus_11376#2      TCCCGTCGCCGTCGCGGGTGTCGTGGCTGCTCCGGTCGCTCAAGATCAGCAAGGTGAAGC 323
                       **    *   * *         * *      * **    *  *   *  *     *  * 

consensus_11376#0      TCTACGACGTCGGCCTGCGCGGGTATCTCCCGCCGATGGACG-AATCGAAAAGCGCGCGA 1255
consensus_11376#3      TCTACGACGTCGGCCTGCGCGGGTATCTCCCGCCGATGGACG-AATCGAAAAGCGCGCGA 230
consensus_11376#1      TCTACGACGCCGACCAGAACGTCCTGAGCGCGTTCCTCGACACGGGCGTGGAGTTCGTCG 644
consensus_11376#2      TGTTCGACGCCGACCCGCACGTCCTGCGCGCGTTCCTCGGCACGGGCGTGGAGTTCGTGG 383
                       * * ***** ** ** *  **       * **    * * *     **   **  **   

consensus_11376#0      AAGGCGGTTTCAGTGTTAGCTCTCATCGCCATTGCATCGATCACTCTCATCTTATCCTGA 1315
consensus_11376#3      AAGGCGGTTTCAGTGTTAGCTCTCATCGCCATTGCATCGATCACTCTCATCTTATCCTGA 290
consensus_11376#1      TCGGCATCGGCAACGA-GAACGTGTCGGCGATGGTGGACCCGGCGGCGGCGCAGGCGTGG 703
consensus_11376#2      TCGGCATCGGCAACGA-GGCCGTCCCGGCGATGGCCAGCCCCGCGGCGGCGGAGTCGTGG 442
                         ***     **  *       *    ** ** *         *           * ** 

consensus_11376#0      GAGTA--TATACTTTTGTCC--AGTTCAGTAAAGTAGAGTAAAGGTGCAGCATCTCTTGC 1371
consensus_11376#3      GAGTA--TATACTTTTGTCC--AGTTCAGTAAAGTAGAGTAAAGGTGCAGCATCTCTTGC 346
consensus_11376#1      GTGCAGCAGCACGTCCGCCCCTACCTCC---CGAGCGCGCGCATCACCTGCATCACCGTC 760
consensus_11376#2      CTGCAGCTGCACGTGGTGCCGCACCTCCGCGCCGGCGCGCGCATCACCTGCATCACCGTC 502
                         * *     ** *    **  *  **         * *   *    * ***** *   *

consensus_11376#0      TGCTG-AAGATTCCCATAGAAGAAAGCAAGGTAAGATAGTTGGAAGACAACCAGCATTTT 1430
consensus_11376#3      TGCTG-AAGATTCCCATAGAAGAAAGCAAGG----------------------------- 376
consensus_11376#1      GGGAACGAGGTGTTCAAGGGCAACGACACCGCGCTCAAGGCCAACCTCCTGCCGGCGATG 820
consensus_11376#2      GGCAACGAGGTGTTCAAGGGCAACGACACCGCCCTCCAGGCCAGCCTCCTCCCGGCGTTG 562
                        *     ** *   **  *   *   **  *                             

consensus_11376#0      TATCTATGTAGTTTTTTTTTTGAGTGAATTTATCTATGTAGTGGATTCTTCATGTAGTAA 1490
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      CAGTCCGTGTACAACGCCGTCGTCGCGCTCGGGCTGCAGGGCCAGGTGAACGTCACGACG 880
consensus_11376#2      CGGTCCGTGCACCAGGCGCTCGGCGCGCTCGGCCTCCAGGGCCGCGTCAACGTCACCACC 622
                                                                                   

consensus_11376#0      AATAGCTTGTTTTGGATTAAGAAATAGAGAAAATTCTTCAAATTTGGAAGATCTAGTAAA 1550
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      GCGCACTCCCTGGACATCATGGGCAGCTCCTACCCTCCCTCCGCCGGCGCGTTCCGGCCC 940
consensus_11376#2      GCGCACTCGCTGGACATCATGGGCGTGTCCTACCCGCCGTCCGCCGGTGCGTTCCACCCC 682
                                                                                   

consensus_11376#0      TTCTGATACTATAGTAGTTTGCCATATTAGTAGGAATTAATCACCTATATGCTCATGCCA 1610
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      GACGCCGTGCCGTACATCCAGCCGCTGCTCAACTTCCTGTCCATGGCGGGGTCCCCGTTC 1000
consensus_11376#2      TCCGCCGCGCCGCACCTGCAGCCGTTCCTGGCCTTCCTGTCGGCGGCGAGGGCGCCGTTC 742
                                                                                   

consensus_11376#0      CATACTAGTATGCTCAAAGATTAACCTAATATTACATTACTCCAGGG-ATGCTTCGGGAG 1669
consensus_11376#3      ----------------------------------------------G-ATGCTTCGGGAG 389
consensus_11376#1      CTGATCAACTGCTACCCGTACTTCGCCTACAAGGCCGACCCGGGCAGCGTGCCGCTGGAG 1060
consensus_11376#2      CTCATCAACTGCTACCCGTACTTCGCCTACAAGGACGACCCGGCGCGCGTGCCGCTGGAG 802
                                                                     *  ***  * ****

consensus_11376#0      CACAAGATCATTCAGATTTCAGAACGATAGGATCG-CCCATGCATTTAGTGTGTCTTTTT 1728
consensus_11376#3      CACAAGATCATTCAGATTTCAGAACGATAGGATCG-CCCATGCATTTAGTGTGTCTTTTT 448
consensus_11376#1      TACGTCCTCTTCCAG-CCCAACGCCGGCGTGACCGACCCAAACACGAAGCTCAACTACGA 1119
consensus_11376#2      TACGTGCTGTTCCAG-CCCAACGCCGGCGTCGTCGACCCGCGCACGAGGCTCGTCTACGA 861
                        **    *  * ***     *   **       ** ***   **    *     **    

consensus_11376#0      ATTTTTATTTGATACTAGCATTTAGGGGCTAAATTTGGCACAGATAGTGATGTAGAA-GT 1787
consensus_11376#3      ATTTTTATTTGATACTAGCATTTAGGGGCTAAATTTGGCACAGATAGTGATGTAGAA-GT 507
consensus_11376#1      CAACATGCTGTACGCCCAGATCGACTCAGTGTACGCCGCGATGCAGGCGCTGGGCCACAC 1179
consensus_11376#2      CAACATGCTGTACGCGCAGGTGGACGCCGTGTACGCGGCGATCCAGGCGATGGGGCACAC 921
                            *  *  *  *     *  *     *  *    **       * * **    *   

consensus_11376#0      AGAAACTAACG--AAAGCTTC-GAGAT--GATACAAGTCCAGATCTGTAATATACGACCT 1842
consensus_11376#3      AGAAACTAACG--AAAGCTTC-GAGAT--GATACAAGTCCAGATCTGTAATATACGACCT 562
consensus_11376#1      CGACGTCGACGTGAAGATCTCCGAGACCGGGTGGCCGTCCAGGGGCGACCCCGACGAGGC 1239
consensus_11376#2      GGACATCGACGTGAAGGTGTCGGAGACCGGGTGGCCGTCCCGCGGCGACCCCGACGAGGC 981
                        **     ***  **    ** ****   * *    **** *    *      ****   

consensus_11376#0      TGGTTTGATAC-AATTCTTGTTGATTAATTTCTTATTGATACATTTTGATTTGTTTATGC 1901
consensus_11376#3      TGGTTTGATAC-AATTCTTGTTGATTAATTTCTTATTGATACATTTTGATTTGTTTAAAA 621
consensus_11376#1      CGGCGCGACGCCGGAGTACGCCGGGATCTACATCGGCAACCTCCTGCGGAGGATCGAGAT 1299
consensus_11376#2      CGGCGCGACGCCCGAGAACGCCGGGACGTACATCGGGAACCTCCTCCGGAGGATCGAGAT 1041
                        **   **  *        *  *     *   *     *     *  *     *  *   

consensus_11376#0      AAACTGTATATTGTATATATCAGTGGGACAATCATCGGTACATAAGTTCAGAGAGATATT 1961
consensus_11376#3      AAA--------------------------------------------------------- 624
consensus_11376#1      GAAGCAGGGGACGCCGCTGAGGCCGTCGTCGCCCATCGACGTCTACGTCTTTGCGCTGTT 1359
consensus_11376#2      GAAGCAGGGCACGCCGCTGCGGCCGCAGGCGCCCATCGACGTCTACGTCTTCGCGCTCTT 1101
                        **                                                         

consensus_11376#0      TGTAGTATTGTACATATTATGTGGCCCTTTTCGATGTGTAATAATTTTGATCTGAGAGTT 2021
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      CAACGAGAACCTCAAGCCGGGGCCGGCATCCGAGCGGAACTACGGGCTGTTCTACCCCGA 1419
consensus_11376#2      CAACGAGAACCTCAAGCCCGGCCCGGCGTCGGAGCGGAACTACGGCCTCTTCTACCCCGA 1161
                                                                                   

consensus_11376#0      TCAGGGCGTAGTACTCGTGCAGACAGGTGTGTGTATAGTACAGTAGTACATGTGTGATTA 2081
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      CGGCACGCCGGTCTACGACGTCGGCCTGCGCGGGTATCTCCCGCCGATGGACGAATCGAA 1479
consensus_11376#2      CGGCACGCCGGTCTA--------------------------------------------- 1176
                                                                                   

consensus_11376#0      TAAAAGTTGCAAAATTGTAACCTAATTAATACCCCCTATGTTTCAACATTTTTACTTATT 2141
consensus_11376#3      ------------------------------------------------------------
consensus_11376#1      AAGCGCGCGAAAGGTAGGCGGTGTGAACTGTGAACTCGATCGTTTTTTTCTCCTTCAAAA 1539
consensus_11376#2      ------------------------------------------------------------
                                                                                   

consensus_11376#0      ATCCCACACATATCAATAAGAAACCAA------------- 2168
consensus_11376#3      ----------------------------------------
consensus_11376#1      TCTGCAAAACTGTTACAAACTTTCTGCTGCATGTCACGCA 1579
consensus_11376#2      ----------------------------------------
                                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)