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Oryza sativa
cluster # 11393 cluster # 11393       Sequences # 9       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11393#0 length = 642 sequences # 1  
consensus_11393#1 length = 621 sequences # 5  
consensus_11393#2 length = 581 sequences # 1  
consensus_11393#3 length = 502 sequences # 1  
consensus_11393#4 length = 261 sequences # 1  

consensusID : consensus_11393#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 642
fasta sequence
                              [CAAGAATTCGGCAGCGAGAGAAAAAGAAAATTCTCGAAGCGAATGGAGAAGAGCAGCACCGCCGCGGGAGGGAGGAGCAGCACGCCGCCGCCGCCGATGTACACGGACGAGTTCGCGCTCGAGGGGAAGAAGCCCGTCAAGAACCCCTTCGTCCCCATCGGTGCATTGGTCACTGCTGGTGTTCTGACGGCCGGCCTGATCAGCTTCCGATATGGCAACTCTAAACTGGGTCAGAAACTGATGAGGGCTCGTGTGGTCGCTCAAGGAGCGACGGTTGCTCTGATGATCGGCAGTGCCTACTACTACGGTGATCAAATCAAGCTGTTCAAGAAAGGGTCAAGCCCTTGAAGACAAGTACAGGAATCTTCATATCTATACTTAGTTTTGGGCAAGATTACGCTGTTCATTGTTCCTCCAGCCCTTGGGGTTTAACCATGTTGTTTTCGCCTGGCACGTGGTAGCTAACAAAAACAAGATCAGATTTGGATTTGCGCATTACTAGGCTTTGAATAAAAAACTTTTCTTTCGTCGACTTGACCCCCAGTTTTGCCTTGTATTGGAACCCAGCACTGTTAATCGAGCGAATGGGTTAAATACATACCCAGTGCAGACCTGTGGCTTTAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CA762270             [CAAGAATTCGGCAGCGAGAGAAAAAGAAAATTCTCGAAGCGAATGGAGAAGAGCAGCACCGCCGCGGGAGGGAGGAGCAGCACGCCGCCGCCGCCGATGTACACGGACGAGTTCGCGCTCGAGGGGAAGAAGCCCGTCAAGAACCCCTTCGTCCCCATCGGTGCATTGGTCACTGCTGGTGTTCTGACGGCCGGCCTGATCAGCTTCCGATATGGCAACTCTAAACTGGGTCAGAAACTGATGAGGGCTCGTGTGGTCGCTCAAGGAGCGACGGTTGCTCTGATGATCGGCAGTGCCTACTACTACGGTGATCAAATCAAGCTGTTCAAGAAAGGGTCAAGCCCTTGAAGACAAGTACAGGAATCTTCATATCTATACTTAGTTTTGGGCAAGATTACGCTGTTCATTGTTCCTCCAGCCCTTGGGGTTTAACCATGTTGTTTTCGCCTGGCACGTGGTAGCTAACAAAAACAAGATCAGATTTGGATTTGCGCATTACTAGGCTTTGAATAAAAAACTTTTCTTTCGTCGACTTGACCCCCAGTTTTGCCTTGTATTGGAACCCAGCACTGTTAATCGAGCGAATGGGTTAAATACATACCCAGTGCAGACCTGTGGCTTTAAAAAAAAAAAAAAAAAAAA]


>consensus_11393#0 CAAGAATTCGGCAGCGAGAGAAAAAGAAAATTCTCGAAGCGAATGGAGAAGAGCAGCACC GCCGCGGGAGGGAGGAGCAGCACGCCGCCGCCGCCGATGTACACGGACGAGTTCGCGCTC GAGGGGAAGAAGCCCGTCAAGAACCCCTTCGTCCCCATCGGTGCATTGGTCACTGCTGGT GTTCTGACGGCCGGCCTGATCAGCTTCCGATATGGCAACTCTAAACTGGGTCAGAAACTG ATGAGGGCTCGTGTGGTCGCTCAAGGAGCGACGGTTGCTCTGATGATCGGCAGTGCCTAC TACTACGGTGATCAAATCAAGCTGTTCAAGAAAGGGTCAAGCCCTTGAAGACAAGTACAG GAATCTTCATATCTATACTTAGTTTTGGGCAAGATTACGCTGTTCATTGTTCCTCCAGCC CTTGGGGTTTAACCATGTTGTTTTCGCCTGGCACGTGGTAGCTAACAAAAACAAGATCAG ATTTGGATTTGCGCATTACTAGGCTTTGAATAAAAAACTTTTCTTTCGTCGACTTGACCC CCAGTTTTGCCTTGTATTGGAACCCAGCACTGTTAATCGAGCGAATGGGTTAAATACATA CCCAGTGCAGACCTGTGGCTTTAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_11393#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 621
fasta sequence
                              [GAGAGAAAAAAAAAAGAAAATTCTCGAAGCGAATGGAGAAGAGCAGCACCGCCGCGGGAGGGAGGAGCAGCACGCCGCCGCCGCCGATGTACACGGACGAGTTCGCGCTCGAGGGGAAGAAGCCCGTCAAGAACCCCTTCGTCCCCATCGGTGCATTGGTCACTGCTGGTGTTCTGACGGCCGGCCTGATCAGCTT--CCG-ATATGG-CAACT-CTAAACTGGGT-CAG-AAACTGATGAGGGCT-CGTGTGGT-CGCTCAAGG-AGCGACGGTTGCTCT-GATG-ATCGGCAGTG-CCTACTACTACGGTGATCAAATCAAGCTGTTCAAGAAA-GGGTCAAG-CCCTTGAAGAC-AAGTACA-GGAATC-TTCATATCTATACTTA-GTTTT-GGGC-AAGATTAC-GCTG-TTCATTGTTCCTCCAGCCATTGGGGTTTAACCATGTTGTTTTCGCCTGGCACGTGGTAGCTAACAAAAACAAGATCAGATTTGGATTTGCGCAATTACTAGGCTTTGAATAAAAAGCTTTTCTTTCGTCGACTTGACACCAAGTTATGCATTGTATTGGAACACAGCACTGTTAATCGAGCGAATGGGTAAAATACATACACAGTGCAGACCTGTGGCTTGAAAAAAAA]

[+] EMBL AK121433             [GAGAGAAAAAAAAAAGAAAATTCTCGAAGCGAATGGAGAAGAGCAGCACCGCCGCGGGAGGGAGGAGCAGCACGCCGCCGCCGCCGATGTACACGGACGAGTTCGCGCTCGAGGGGAAGAAGCCCGTCAAGAACCCCTTCGTCCCCATCGGTGCATTGGTCACTGCTGGTGTTCTGACGGCCGGCCTGATCAGCTT  CCG ATATGG CAACT CTAAACTGGGT CAG AAACTGATGAGGGCT CGTGTGGT CGCTCAAGG AGCGACGGTTGCTCT GATG ATCGGCAGTG CCTACTACTACGGTGATCAAATCAAGCTGTTCAAGAAA GGGTCAAG CCCTTGAAGAC AAGTACA GGAATC TTCATATCTATACTTA GTTTT GGGC AAGATTAC GCTG TTCATTGTTCCTCCAGCCATTGGGGTTTAACCATGTTGTTTTCGCCTGGCACGTGGTAGCTAACAAAAACAAGATCAGATTTGGATTTGCGCAATTACTAGGCTTTGAATAAAAAGCTTTTCTTTCGTCGACTTGACACCAAGTTATGCATTGTATTGGAACACAGCACTGTTAATCGAGCGAATGGGTAAAATACATACACAGTGCAGAC                  ]
[+] EMBL AK059407             [           AAAAGAAAATTCTCGAAGCGAATGGAGAAGAGCAGCACCGCCGCGGGAGGGAGGAGCAGCACGCCGCCGCCGCCGATGTACACGGACGAGTTCGCGCTCGAGGGGAAGAAGCCCGTCAAGAACCCCTTCGTCCCCATCGGTGCATTGGTCACTGCTGGTGTTCTGACGGCCGGCCTGATCAGCTT  CCG ATATGG CAACT CTAAACTGGGT CAG AAACTGATGAGGGCT CGTGTGGT CGCTCAAGG AGCGACGGTTGCTCT GATG ATCGGCAGTG CCTACTACTACGGTGATCAAATCAAGCTGTTCAAGAAA GGGTCAAG CCCTTGAAGAC AAGTACA GGAATC TTCATATCTATACTTA GTTTT GGGC AAGATTAC GCTG TTCATTGTTCCTCCAGCCATTGGGGTTTAACCATGTTGTTTTCGCCTGGCACGTGGTAGCTAACAAAAACAAGATCAGATTTGGATTTGCGCAATTACTAGGCTTTGAATAAAAAGCTTTTCTTTCGTCGACTTGACACCAAGTTATGCATTGTATTGGAACACAGCACTGTTAATCGAGCGAATGGGTAAAATACATACACAGTGCAGAC                  ]
[+] EMBL OSS15751A            [                                        GAGCAGCACCGCCGCGGGAGGGAGGAGCAGCACGCCGCCGNCGCCGATGTACACGGACGAGTTCGCGCTCGAGGGGAAGAAGCCCGTCAAGAACCCCTTCGTCCCCATCGGTGCATTGGTCACTGCTGGTGTTCTGACGGNCGGNCTGATCAGCTT  CCG ATATGG CAACT CTAAACTGGGT CAG AAACTGATGAGGGCT CGTGTGGT CGCTCAAGG AGCGACGGTTGCTCT GATG ATCGGCAGTG NCTACTACTACGGTGATCAAATCAAGCTGTTCAAGAAAGGGGTCAAGTCNTTTGAAGACAAAGTACAGGGNATCTTTCATATCTATACTTAGGTTTTGGGGCAAAGATTACGGNTGTTTCATTtg                                                                                                                                                                                                                             ]
[+] EMBL AU091899             [                                                 CGCCGCGGGAGGGAGGAGCAGCACGCCGCCGCCGCCGATGTACACGGACGAGTTCGCGCTCGAGGGGAAGAAGCCCGTCAAGAACCCCTTCGTCCCCATCGGTGCATTGGTCACTGCTGGTGTTCTGACGGCCGGCCTGATCAGCTT  CCG ATATGG CAACT CTAAACTGGGT CAG AAACTGATGAGGGCT CGTGTGGT CG TCAAGG AGCGACGGTTGCTCT GATG ATCGGCAGTG CCTACTACTACGGTGATCAAATCAAGCTGTTCAAGAAA GGGTCAAG CCCTTGAAGAC A                                                                                                                                                                                                                                                                                             ]
[+] EMBL C99130               [                                                                                                                                                                                             TCAACTTCCCCGAATATGGCCAACTCCTAAACTGGGTCCAGAAAACTGATGAGGGCTCCGTGTGGTCCGCTCAAGGAACCGACGGTTGCTCTGGATGAACCGGCAGTGCCCTACTACTACGGTGATCAAATCAAGCTGTTCAAGAAA GGGTCAAG  CCTTGAAGAC AAGTACA GGAATC TTCATATCTATACTTA GTTTT GGGC AAGATTAC GCTG TTCATTGTTCCTCCAGCCATTGGGGTTTAACCATGTTGTTTTCGCCTGGCACGTGGTAGCTAACAAAAACAAGATCAGATTTGGATTTGCGCAATTACTAGGCTTTGAATAAAAAGCTTTTCTTTCGTCGACTTGACACCAAGTTATGCATTGTATTGGAACACAGCACTGTTAATCGAGCGAATGGGTAAAATACATACACAGTGCAGACCTGTGGCTTGAAAAAAAA]


>consensus_11393#1 GAGAGAAAAAAAAAAGAAAATTCTCGAAGCGAATGGAGAAGAGCAGCACCGCCGCGGGAG GGAGGAGCAGCACGCCGCCGCCGCCGATGTACACGGACGAGTTCGCGCTCGAGGGGAAGA AGCCCGTCAAGAACCCCTTCGTCCCCATCGGTGCATTGGTCACTGCTGGTGTTCTGACGG CCGGCCTGATCAGCTTCCGATATGGCAACTCTAAACTGGGTCAGAAACTGATGAGGGCTC GTGTGGTCGCTCAAGGAGCGACGGTTGCTCTGATGATCGGCAGTGCCTACTACTACGGTG ATCAAATCAAGCTGTTCAAGAAAGGGTCAAGCCCTTGAAGACAAGTACAGGAATCTTCAT ATCTATACTTAGTTTTGGGCAAGATTACGCTGTTCATTGTTCCTCCAGCCATTGGGGTTT AACCATGTTGTTTTCGCCTGGCACGTGGTAGCTAACAAAAACAAGATCAGATTTGGATTT GCGCAATTACTAGGCTTTGAATAAAAAGCTTTTCTTTCGTCGACTTGACACCAAGTTATG CATTGTATTGGAACACAGCACTGTTAATCGAGCGAATGGGTAAAATACATACACAGTGCA GACCTGTGGCTTGAAAAAAAA



consensusID : consensus_11393#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 581
fasta sequence
                              [CAAGAATTCGGCAGCGAGAGAAAAAGAAAATTCTCGAAGCGAATGGAGAAGAGCAGCACCGCCGGGGGGGGGAGGAGCAGCACGCCGCCGCCGCCGATGTACACGGACGAGTTCGCGCTCGAGGGGAAGAAGCCCGTCAAGAACCCCTTCGTCCCCATCGGTGCATTGGTCACTGCTGGTGTTCTGACGGCCGGCCTGATCAGCTTCCGATATGGCAACTCTAAACTGGGTCAGAAACTGATGAGGGCTCGTGTGGTCGCTCAAGGAGCGACGGTTGCTCTGATGATCGGCAGTGCCTACTACTACGGTGATCAAATCAAGCTGTTCAAGAAAGGGTCAAGCCCTTGAAGACAAGTACAGGAATCTTCATAATCTATACTTAGTTTTGGGCAAGATTACGCTGTTCATTGTTCCTTCAGCCATTGGGGGTTAACCATGTTGTTTCCGCCTGGCACGTGGGTGCTTACAAAAACAAGATCAGATTTGGATTTTGCGCAAATACCTTAGGTTTGTATTAAAAAGTTTTTTTTTTGTGCAAAAATNAATTCTTCTTCTAAAAAACCTTGGGGGGGGGGCCGGTA]

[+] EMBL BE039222             [CAAGAATTCGGCAGCGAGAGAAAAAGAAAATTCTCGAAGCGAATGGAGAAGAGCAGCACCGCCGGGGGGGGGAGGAGCAGCACGCCGCCGCCGCCGATGTACACGGACGAGTTCGCGCTCGAGGGGAAGAAGCCCGTCAAGAACCCCTTCGTCCCCATCGGTGCATTGGTCACTGCTGGTGTTCTGACGGCCGGCCTGATCAGCTTCCGATATGGCAACTCTAAACTGGGTCAGAAACTGATGAGGGCTCGTGTGGTCGCTCAAGGAGCGACGGTTGCTCTGATGATCGGCAGTGCCTACTACTACGGTGATCAAATCAAGCTGTTCAAGAAAGGGTCAAGCCCTTGAAGACAAGTACAGGAATCTTCATAATCTATACTTAGTTTTGGGCAAGATTACGCTGTTCATTGTTCCTTCAGCCATTGGGGGTTAACCATGTTGTTTCCGCCTGGCACGTGGGTGCTTACAAAAACAAGATCAGATTTGGATTTTGCGCAAATACCTTAGGTTTGTATTAAAAAGTTTTTTTTTTGTGCAAAAATNAATTCTTCTTCTAAAAAACCTTGGGGGGGGGGCCGGTA]


>consensus_11393#2 CAAGAATTCGGCAGCGAGAGAAAAAGAAAATTCTCGAAGCGAATGGAGAAGAGCAGCACC GCCGGGGGGGGGAGGAGCAGCACGCCGCCGCCGCCGATGTACACGGACGAGTTCGCGCTC GAGGGGAAGAAGCCCGTCAAGAACCCCTTCGTCCCCATCGGTGCATTGGTCACTGCTGGT GTTCTGACGGCCGGCCTGATCAGCTTCCGATATGGCAACTCTAAACTGGGTCAGAAACTG ATGAGGGCTCGTGTGGTCGCTCAAGGAGCGACGGTTGCTCTGATGATCGGCAGTGCCTAC TACTACGGTGATCAAATCAAGCTGTTCAAGAAAGGGTCAAGCCCTTGAAGACAAGTACAG GAATCTTCATAATCTATACTTAGTTTTGGGCAAGATTACGCTGTTCATTGTTCCTTCAGC CATTGGGGGTTAACCATGTTGTTTCCGCCTGGCACGTGGGTGCTTACAAAAACAAGATCA GATTTGGATTTTGCGCAAATACCTTAGGTTTGTATTAAAAAGTTTTTTTTTTGTGCAAAA ATNAATTCTTCTTCTAAAAAACCTTGGGGGGGGGGCCGGTA



consensusID : consensus_11393#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 502
fasta sequence
                              [TTGGTCACTGCAGGTGTTCTGACGGCCGGCCTGATCAGCTCCCGATATGGCAACTCTAAACTGGGTCAGAAACTGATGAGGGCTCGTGTGGTCGCTCAAGGAGCGACGGTTGCTCTGATGATCGGCAGTGCCTACTACTACGGTGATCAAATCAAGCTGTTCAAGAAAGGGTCAAGCCCTTGAAGACAAGTACAGGAATCTTCATATCTATACTTAGTTTTGGGCAAGATTACGCTGTTCATTGTTCCTCCAGCCATTGGGGTTTATCCATGTTGTTTTCGCCTGGCACGTGGTAGCTAACAAAAACAAGATCAGATTTGGATTTGCGCAATTACTAGGCTTTGAATAAAAAGCTTTTCTTTCGTCGACTTGACACCAAGTTATGCATTGTATTGGAACACAGCACTGTTAATCGAGCGAATGGGTAAAATAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CB000958             [TTGGTCACTGCAGGTGTTCTGACGGCCGGCCTGATCAGCTCCCGATATGGCAACTCTAAACTGGGTCAGAAACTGATGAGGGCTCGTGTGGTCGCTCAAGGAGCGACGGTTGCTCTGATGATCGGCAGTGCCTACTACTACGGTGATCAAATCAAGCTGTTCAAGAAAGGGTCAAGCCCTTGAAGACAAGTACAGGAATCTTCATATCTATACTTAGTTTTGGGCAAGATTACGCTGTTCATTGTTCCTCCAGCCATTGGGGTTTATCCATGTTGTTTTCGCCTGGCACGTGGTAGCTAACAAAAACAAGATCAGATTTGGATTTGCGCAATTACTAGGCTTTGAATAAAAAGCTTTTCTTTCGTCGACTTGACACCAAGTTATGCATTGTATTGGAACACAGCACTGTTAATCGAGCGAATGGGTAAAATAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_11393#3 TTGGTCACTGCAGGTGTTCTGACGGCCGGCCTGATCAGCTCCCGATATGGCAACTCTAAA CTGGGTCAGAAACTGATGAGGGCTCGTGTGGTCGCTCAAGGAGCGACGGTTGCTCTGATG ATCGGCAGTGCCTACTACTACGGTGATCAAATCAAGCTGTTCAAGAAAGGGTCAAGCCCT TGAAGACAAGTACAGGAATCTTCATATCTATACTTAGTTTTGGGCAAGATTACGCTGTTC ATTGTTCCTCCAGCCATTGGGGTTTATCCATGTTGTTTTCGCCTGGCACGTGGTAGCTAA CAAAAACAAGATCAGATTTGGATTTGCGCAATTACTAGGCTTTGAATAAAAAGCTTTTCT TTCGTCGACTTGACACCAAGTTATGCATTGTATTGGAACACAGCACTGTTAATCGAGCGA ATGGGTAAAATAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_11393#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 261
fasta sequence
                              [CTGATCAGCTTCCGATATGGGCAACTCTAAACTGGGTCAGAAACTGATGAGGGCTCTTGTGGTCGCTCAAGGAGCGACGGTTGCTCTGATGATCGCCCAGTGCCTACTACTACGGTGATCAAATGCAAGCTGTTCAAGAAAGGGTGCAAGCCCTTGGAAGACAAGTGACAGGAATGCTGTGCATGATGCTGATGACTTGAGTTTGTGGGCAAGATTACGCTGGTTCATTGGTTGCCTGCCAGCCATTGGGGTTTAACCATG]

[+] EMBL BI798072             [CTGATCAGCTTCCGATATGGGCAACTCTAAACTGGGTCAGAAACTGATGAGGGCTCTTGTGGTCGCTCAAGGAGCGACGGTTGCTCTGATGATCGCCCAGTGCCTACTACTACGGTGATCAAATGCAAGCTGTTCAAGAAAGGGTGCAAGCCCTTGGAAGACAAGTGACAGGAATGCTGTGCATGATGCTGATGACTTGAGTTTGTGGGCAAGATTACGCTGGTTCATTGGTTGCCTGCCAGCCATTGGGGTTTAACCATG]


>consensus_11393#4 CTGATCAGCTTCCGATATGGGCAACTCTAAACTGGGTCAGAAACTGATGAGGGCTCTTGT GGTCGCTCAAGGAGCGACGGTTGCTCTGATGATCGCCCAGTGCCTACTACTACGGTGATC AAATGCAAGCTGTTCAAGAAAGGGTGCAAGCCCTTGGAAGACAAGTGACAGGAATGCTGT GCATGATGCTGATGACTTGAGTTTGTGGGCAAGATTACGCTGGTTCATTGGTTGCCTGCC AGCCATTGGGGTTTAACCATG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11393#0      CAAGAATTCGGCAGCGAGAGAAAAAGAAAATTCTCGAAGCGAATGGAGAAGAGCAGCACC 60
consensus_11393#3      ------------------------------------------------------------
consensus_11393#1      ----------GAGAGAAAAAAAAAAGAAAATTCTCGAAGCGAATGGAGAAGAGCAGCACC 50
consensus_11393#2      CAAGAATTCGGCAGCGAGAGAAAAAGAAAATTCTCGAAGCGAATGGAGAAGAGCAGCACC 60
consensus_11393#4      ------------------------------------------------------------
                                                                                   

consensus_11393#0      GCCGCGGGAGGGAGGAGCAGCACGCCGCCGCCGCCGATGTACACGGACGAGTTCGCGCTC 120
consensus_11393#3      ------------------------------------------------------------
consensus_11393#1      GCCGCGGGAGGGAGGAGCAGCACGCCGCCGCCGCCGATGTACACGGACGAGTTCGCGCTC 110
consensus_11393#2      GCCGGGGGGGGGAGGAGCAGCACGCCGCCGCCGCCGATGTACACGGACGAGTTCGCGCTC 120
consensus_11393#4      ------------------------------------------------------------
                                                                                   

consensus_11393#0      GAGGGGAAGAAGCCCGTCAAGAACCCCTTCGTCCCCATCGGTGCATTGGTCACTGCTGGT 180
consensus_11393#3      ---------------------------------------------TTGGTCACTGCAGGT 15
consensus_11393#1      GAGGGGAAGAAGCCCGTCAAGAACCCCTTCGTCCCCATCGGTGCATTGGTCACTGCTGGT 170
consensus_11393#2      GAGGGGAAGAAGCCCGTCAAGAACCCCTTCGTCCCCATCGGTGCATTGGTCACTGCTGGT 180
consensus_11393#4      ------------------------------------------------------------
                                                                                   

consensus_11393#0      GTTCTGACGGCCGGCCTGATCAGCTTCCGATATGG-CAACTCTAAACTGGGTCAGAAACT 239
consensus_11393#3      GTTCTGACGGCCGGCCTGATCAGCTCCCGATATGG-CAACTCTAAACTGGGTCAGAAACT 74
consensus_11393#1      GTTCTGACGGCCGGCCTGATCAGCTTCCGATATGG-CAACTCTAAACTGGGTCAGAAACT 229
consensus_11393#2      GTTCTGACGGCCGGCCTGATCAGCTTCCGATATGG-CAACTCTAAACTGGGTCAGAAACT 239
consensus_11393#4      ---------------CTGATCAGCTTCCGATATGGGCAACTCTAAACTGGGTCAGAAACT 45
                                      ********** ********* ************************

consensus_11393#0      GATGAGGGCTCGTGTGGTCGCTCAAGGAGCGACGGTTGCTCTGATGATCGGC-AGTGCCT 298
consensus_11393#3      GATGAGGGCTCGTGTGGTCGCTCAAGGAGCGACGGTTGCTCTGATGATCGGC-AGTGCCT 133
consensus_11393#1      GATGAGGGCTCGTGTGGTCGCTCAAGGAGCGACGGTTGCTCTGATGATCGGC-AGTGCCT 288
consensus_11393#2      GATGAGGGCTCGTGTGGTCGCTCAAGGAGCGACGGTTGCTCTGATGATCGGC-AGTGCCT 298
consensus_11393#4      GATGAGGGCTCTTGTGGTCGCTCAAGGAGCGACGGTTGCTCTGATGATCGCCCAGTGCCT 105
                       *********** ************************************** * *******

consensus_11393#0      ACTACTACGGTGATCAAAT-CAAGCTGTTCAAGAAAGGGT-CAAGCCCTTG-AAGACAAG 355
consensus_11393#3      ACTACTACGGTGATCAAAT-CAAGCTGTTCAAGAAAGGGT-CAAGCCCTTG-AAGACAAG 190
consensus_11393#1      ACTACTACGGTGATCAAAT-CAAGCTGTTCAAGAAAGGGT-CAAGCCCTTG-AAGACAAG 345
consensus_11393#2      ACTACTACGGTGATCAAAT-CAAGCTGTTCAAGAAAGGGT-CAAGCCCTTG-AAGACAAG 355
consensus_11393#4      ACTACTACGGTGATCAAATGCAAGCTGTTCAAGAAAGGGTGCAAGCCCTTGGAAGACAAG 165
                       ******************* ******************** ********** ********

consensus_11393#0      T-ACAGGAATCTT---CAT-ATCT--AT-ACTT-AGTTT-TGGGCAAGATTACGCTG-TT 404
consensus_11393#3      T-ACAGGAATCTT---CAT-ATCT--AT-ACTT-AGTTT-TGGGCAAGATTACGCTG-TT 239
consensus_11393#1      T-ACAGGAATCTT---CAT-ATCT--AT-ACTT-AGTTT-TGGGCAAGATTACGCTG-TT 394
consensus_11393#2      T-ACAGGAATCTT---CATAATCT--AT-ACTT-AGTTT-TGGGCAAGATTACGCTG-TT 405
consensus_11393#4      TGACAGGAATGCTGTGCATGATGCTGATGACTTGAGTTTGTGGGCAAGATTACGCTGGTT 225
                       * ********  *   *** **    ** **** ***** ***************** **

consensus_11393#0      CATTGTT---CCTCCAGCCCTTGGGGTTTAACCATGTTGTTTTCGCCTGGCACGTGGTAG 461
consensus_11393#3      CATTGTT---CCTCCAGCCATTGGGGTTTATCCATGTTGTTTTCGCCTGGCACGTGGTAG 296
consensus_11393#1      CATTGTT---CCTCCAGCCATTGGGGTTTAACCATGTTGTTTTCGCCTGGCACGTGGTAG 451
consensus_11393#2      CATTGTT---CCTTCAGCCATTGGGGGTTAACCATGTTGTTTCCGCCTGGCACGTGGGTG 462
consensus_11393#4      CATTGGTTGCCTGCCAGCCATTGGGGTTTAACCATG------------------------ 261
                       ***** *   *   ***** ****** *** *****                        

consensus_11393#0      CTAACAAAAACAAGATCAGATTTGGATTT-GCGCA-TTAC--TAGGCTTTGAATAAAAAA 517
consensus_11393#3      CTAACAAAAACAAGATCAGATTTGGATTT-GCGCAATTAC--TAGGCTTTGAATAAAAAG 353
consensus_11393#1      CTAACAAAAACAAGATCAGATTTGGATTT-GCGCAATTAC--TAGGCTTTGAATAAAAAG 508
consensus_11393#2      CTTACAAAAACAAGATCAGATTTGGATTTTGCGCAAATACCTTAGGTTTGTATTAAAAAG 522
consensus_11393#4      ------------------------------------------------------------
                                                                                   

consensus_11393#0      CTTTTCTTTCGTC--GACTTGACCCCCAGTTTTGCCTTGTATTGGAACCCAGCACTGTTA 575
consensus_11393#3      CTTTTCTTTCGTC--GACTTGACACCAAGTTATGCATTGTATTGGAACACAGCACTGTTA 411
consensus_11393#1      CTTTTCTTTCGTC--GACTTGACACCAAGTTATGCATTGTATTGGAACACAGCACTGTTA 566
consensus_11393#2      TTTTTTTTTTGTGCAAAAATNAATTCTTCTTCTAAAAAACCTTGGGGGGGGGGCCGGTA- 581
consensus_11393#4      ------------------------------------------------------------
                                                                                   

consensus_11393#0      ATCGAGCGAATGGGTTAAATACA-TACCCAGTGCAGACCTGTGGCTTTAAAAAAAAAAAA 634
consensus_11393#3      ATCGAGCGAATGGGTAAAATAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 471
consensus_11393#1      ATCGAGCGAATGGGTAAAATACA-TACACAGTGCAGACCTGTGGCTTGAAAAAAAA---- 621
consensus_11393#2      ------------------------------------------------------------
consensus_11393#4      ------------------------------------------------------------
                                                                                   

consensus_11393#0      AAAAAAAA----------------------- 642
consensus_11393#3      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 502
consensus_11393#1      -------------------------------
consensus_11393#2      -------------------------------
consensus_11393#4      -------------------------------
                                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)