These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11405#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1515 fasta sequence [GCAACTGCATCCACGAACAAAACGGCTGCCTCTCTCTCCCTCCATCTCCCTCGCTGGAGTGGAGACTCTTCAAGGCCAAGGAGAGTAGCAGGCAGCCAGCACAGCAGCGAGTGATAAAAAAGAGGCAGCTCTTGGTCGTTGGTGTGCATGCTCACGCGATTCGCGTCCAAAAATTTATCAGGAAACCTTTTTCGAGGTCGCGAGTATCAATACATCTTCGTGCTAGTGCGTGTGTGAGAGAGAGGGAGGCGGCCATGACCGGAGGGGAGGAGCAGGGGAGGAGGCTGTTTGGCGTGTCGCTGACAGACAGGCCCAGGTGGCAGCAGTTCTTGATCTGCTCATCGGGGTTCTTCTTCGGCTACCTTGTCAATGGCATCTGCGAGGAATACGTCTACAACCGGCTTCAGTTCAGCTTCGGCTGGTACTTCACATTTGTGCAGGGGTTCGTGTACTTGGGTCTGATTCGCCTGCAGGGATTCACGGTGAAGCAGATGGTGAACCCGTGGCGGACGTACGTGCGGCTCTCGGCTGTGCTCATGGGATCCCATGGCCTCACCAAGGGTTCCCTCGCATTCCTCAACTACCCCGCCCAAATTATGTTCAAATCCACCAAGGTTTTGCCAGTGATGATAATGGGAGCATTTATACCTGGATTAAGAAGAAAATATCCGTTCCATGAGTACATATCAGCAGTGATGCTTGTTATCGGCCTCATACTATTCACGCTCGCGGACGCACAATCATCACCTAATTTCAGCATGATTGGTGTGGCCATGGTTTCTGGAGCGCTTGTCATGGATGCATTTCTAGGTAATCTGCAAGAAGCCATATTTAAGATGAACCCTGACACCACACAGATGGAGATGTTGTTCTGCTCAACTGTTGTTGGCCTACCTTTCTTGGTGGTGCCAATGGTGTTAACAGGGGAGCTGATGCGGGCGTGGACTGCATGTTCCCAGCATATGTACGTGTACGCCGTGCTGGTGTTCGAGGCGATGGCCACGTTCGTCGGCCAGGTCTCGGTGCTCTCCCTCATCGCGCTCTTCGGCGCCGCAACAACAGCTATGGTGACGACGGCGAGGAAGGCGGTGACCCTGCTCCTGTCGTACCTGATATTCACCAAGCCATTGACGGAGCAGCACGTCACCGGGCTGCTGCTGATCTCCATGGGCATCGTGCTGAAGCTCCTGCTGGAGAACAAGGAGAACGTCCCGCGCAGGCAGGTGAGGAAGACGGTGCAGCATTGGGACGACAAGCAGCGGGAGATCAGAGAAGTAGAAGAGGAGAAAGCTCCCTTGGTATGACCATTTTTTTAGTTGGCCCAAGCAAAGGCTGAACGAATCACAATACACCAATTGCAGGACAGGATAGAAAATGCTCAAAAAAGAGTAACAACCCCTCTCCCTCTGTCTCTCTCATGTAATGTTTTGCTGTTGTGAGATTGTTTTGTGGGTCTATGCCAAAGGATTCGATTGACGATAATTACAGATTAATTTGGGTGGAGGTGAACAAAAA] [+] EMBL CB670686 [GCAACTGCATCCACGAACAAAACGGCTGCCTCTCTCTCCCTCCATCTCCCTCGCTGGAGTGGAGACTCTTCAAGGCCAAGGAGAGTAGCAGGCAGCCAGCACAGCAGCGAGTGATAAAAAAGAGGCAGCTCTTGGTCGTTGGTGTGCATGCTCACGCGATTCGCGTCCAAAAATTTATCAGGAAACCTTTTTCGAGGTCGCGAGTATCAATACATCTTCGTGCTAGTGCGTGTGTGAGAGAGAGGGAGGCGGCCATGACCGGAGGGGAGGAGCAGGGGAGGAGGCTGTTTGGCGTGTCGCTGACAGACAGGCCCAGGTGGCAGCAGTTCTTGATCTGCTCATCGGGGTTCTTCTTCGGCTACCTTGTCAATGGCATCTGCGAGGAATACGTCTACAACCGGCTTCAGTTCAGCTTCGGCTGGTACTTCACATTTGTGCAGGGGTTCGTGTACTTGGGTCTGATTCGCCTGCAGGGATTCACGGTGAAGCAGATGGTGAACCCGTGGCGGACGTACGTGCGGCTCTCGGCTGTGCTCATGGGATCCCATGGCCTCACCAAGGGTTCCCTCGCATTCCTCAACTACCCCGCCCAAATTATGTTCAAATCCACCAAGGTTTTGCCAGTGATGATAATGGGAGCATTTATACCTGGATTAAGAAGAAAATATCCGTTCCATGAGTACATATCAGCAGTGATGCTTGTTATCGGCCTCATACTATTCACGCTCGCGGACGCACAATCATCACCTAATTTCAGCATGATTGGTGTGGCCATGGTTTCTGGAGCGCTTG ] [+] EMBL AK064777 [ CTGCATCCACGAACAAAACGGCTGCCTCTCTCTCCCTCCATCTCCCTCGCTGGAGTGGAGACTCTTCAAGGCCAAGGAGAGTAGCAGGCAGCCAGCACAGCAGCGAGTGATAAAAAAGAGGCAGCTCTTGGTCGTTGGTGTGCATGCTCACGCGATTCGCGTCCAAAAATTTATCAGGAAACCTTTTTCGA GAGTATCAATACATCTTCGTGCTAGTGCGTGTGTGAGAGAGAGGGAGGCGGCCATGACCGGAGGGGAGGAGCAGGAGAGGAGGCTGTTTGGCGTGTCGCTGACAGACAGGCCCAGGTGGCAGCAGTTCTTGATCTGCTCATCGGGGTTCTTCTTCGGCTACCTTGTCAATGGCATCTGCGAGGAATACGTCTACAACCGGCTTCAGTTCAGCTTCGGCTGGTACTTCACATTTGTGCAGGGGTTCGTGTACTTGGGTCTGATTCGCCTGCAGGGATTCACGGTGAAGCAGATGGTGAACCCGTGGCGGACGTACGTGCGGCTCTCGGCTGTGCTCATGGGATCCCATGGCCTCACCAAGGGTTCCCTCGCATTCCTCAACTACCCCGCCCAAATTATGTTCAAATCCACCAAGGTTTTGCCAGTGATGATAATGGGAGCATTTATACCTGGATTAAGAAGAAAATATCCGTTCCATGAGTACATATCAGCAGTGATGCTTGTTATCGGCCTCATACTATTCACGCTCGCGGACGCACAATCATCACCTAATTTCAGCATGATTGGTGTGGCCATGGTTTCTGGAGCGCTTGTCATGGATGCATTTCTAGGTAATCTGCAAGAAGCCATATTTAAGATGAACCCTGACACCACACAGATGGAGATGTTGTTCTGCTCAACTGTTGTTGGCCTACCTTTCTTGGTGGTGCCAATGGTGTTAACAGGGGAGCTGATGCGGGCGTGGACTGCATGTTCCCAGCATATGTACGTGTACGCCGTGCTGGTGTTCGAGGCGATGGCCACGTTCGTCGGCCAGGTCTCGGTGCTCTCCCTCATCGCGCTCTTCGGCGCCGCAACAACAGCTATGGTGACGACGGCGAGGAAGGCGGTGACCCTGCTCCTGTCGTACCTGATATTCACCAAGCCATTGACGGAGCAGCACGTCACAGGGCTGCTGCTGATCTCCATGGGCATCGTGCTGAAGCTCCTGCTGGAGAACAAGGAGAACGTCCCGCGCAGGCAGGTGAGGAAGACGGTGCAGCATTGGGACGACAAGCAGCGGGAGATCAGAGAAGTAGAAGAGGAGAAAGCTCCCTTGGTATGACCATTTTTTTAGTTGGCCCAAGCAAAGGCTGAACGAATCACAATACACCAATTGCAGGACAGGATAGAAAATGCTCAAAAAAGAGTAACAACCCCTCTCCCTCTGTCTCTCTCATGTAATGTTTTGCTGTTGTGAGATTGTTTTGTGGGTCTATGCCAAAGGATTCGATTGACGATA ] [+] EMBL CB646146 [ AACGGCTGCCTCTCTCTCCCTCCATCTCCCTCGCTGGAGTGGAGACTCTTCAAGGCCAAGGAGAGTAGCAGGCAGCCAGCACAGCAGCGAGTGATAAAAAAGAGGCAGCTCTTGGTCGTTGGTGTGCATGCTCACGCGATTCGCGTCCAAAAATTTATCAGGAAACCTTTTTCGAGGTCGCGAGTATCAATACATCTTCGTGCTAGTGCGTGTGTGAGAGAGAGGGAGGCGGCCATGACCGGAGGGGAGGAGCAGGGGAGGAGGCTGTTTGGCGTGTCGCTGACAGACAGGCCCAGGTGGCAGCAGTTCTTGATCTGCTCATCGGGGTTCTTCTTCGGCTACCTTGTCAATGGCATCTGCGAGGAATACGTCTACAACCGGCTTCAGTTCAGCTTCGGCTGGTACTTCACATTTGTGCAGGGGTTCGTGTACTTGGGTCTGATTCGCCTGCAGGGATTCACGGTGAAGCAGATGGTGAACCCGTGGCGGACGTACGTGCGGCTCTCGGCTGTGCTCATGGGATCCCATGGCCTCACCAAGGGTTCCCTCGCATTCCTCAACTACCCCGCCCAAATTATGTTCAAATCCACCAAGGTTTTGCCAGTGATGATAATGGGAGCATTTATACCTGGATTAAGAAGAAAATATCCGTTCCATGAGTACATATCAGCAGTGATGCTTGTTATCGGCCTCATACTATTCACGCTCGCGGACGCACAATCATCACCTAATTTCAGCATGATTGGTGTGGCCATGGTTTCTGGAGCGCTTGTCATGGATGCATTT ] [+] EMBL CB679454 [ ATCTCCCTCGCTGGAGTGGAGACTCTTCAAGGCCAAGGAGAGTAGCAGGCAGCCAGCACAGCAGCGAGTGATAAAAAAGAGGCAGCTCTTGGTCGTTGGTGTGCATGCTCACGCGATTCGCGTCCAAAAATTTATCAGGAAACCTTTTTCGAGGTCGCGAGTATCAATACATCTTCGTGCTAGTGCGTGTGTGAGAGAGAGGGAGGCGGCCATGACCGGAGGGGAGGAGCAGGGGAGGAGGCTGTTTGGCGTGTCGCTGACAGACAGGCCCAGGTGGCAGCAGTTCTTGATCTGCTCATCGGGGTTCTTCTTCGGCTACCTTGTCAATGGCATCTGCGAGGAATACGTCTACAACCGGCTTCAGTTCAGCTTCGGCTGGTACTTCACATTTGTGCAGGGGTTCGTGTACTTGGGTCTGATTCGCCTGCAGGGATTCACGGTGAAGCAGATGGTGAACCCGTGGCGGACGTACGTGCGGCTCTCGGCTGTGCTCATGGGATCCCATGGCCTCACCAAGGGTTCCCTCGCATTCCTCAACTACCCCGCCCAAATTATGTTCAAATCCACCAAGGTTTTGCCAGTGATGATAATGGGAGCATTTATACCTGGATTAAGAAGAAAATATCCGTTCCATGAGTACATATCAGCAGTGATGCTTGTTATCGGCCTCATACTATTCACGCTCGCGGACGCACAATCATCACCTAATTTCAGCATGATTGGTGTGGCCATGGTTTCTGGAGCGCTTGTCATGGATGCATTTCTAGGTAATCTGNCAGAAGCCATATTTAAG ] [+] EMBL AK104538 [ AGTGCGTGTGTGAGAGAGAGGGAGGCGGCCATGACCGGAGGGGAGGAGCAGGGGAGGAGGCTGTTTGGCGTGTCGCTGACAGACAGGCCCAGGTGGCAGCAGTTCTTGATCTGCTCATCGGGGTTCTTCTTCGGCTACCTTGTCAATGGCATCTGCGAGGAATACGTCTACAACCGGCTTCAGTTCAGCTTCGGCTGGTACTTCACATTTGTGCAGGGGTTCGTGTACTTGGGTCTGATTCGCCTGCAGGGATTCACGGTGAAGCAGATGGTGAACCCGTGGCGGACGTACGTGCGGCTCTCGGCTGTGCTCATGGGATCCCATGGCCTCACCAAGGGTTCCCTCGCATTCCTCAACTACCCCGCCCAAATTATGTTCAAATCCACCAAGGTTTTGCCAGTGATGATAATGGGAGCATTTATACCTGGATTAAGAAGAAAATATCCGTTCCATGAGTACATATCAGCAGTGATGCTTGTTATCGGCCTCATACTATTCACGCTCGCGGACGCACAATCATCACCTAATTTCAGCATGATTGGTGTGGCCATGGTTTCTGGAGCGCTTGTCATGGATGCATTTCTAGGTAATCTGCAAGAAGCCATATTTAAGATGAACCCTGACACCACACAGATGGAGATGTTGTTCTGCTCAACTGTTGTTGGCCTACCTTTCTTGGTGGTGCCAATGGTGTTAACAGGGGAGCTGATGCGGGCGTGGACTGCATGTTCCCAGCATATGTACGTGTACGCCGTGCTGGTGTTCGAGGCGATGGCCACGTTCGTCGGCCAGGTCTCGGTGCTCTCCCTCATCGCGCTCTTCGGCGCCGCAACAACAGCTATGGTGACGACGGCGAGGAAGGCGGTGACCCTGCTCCTGTCGTACCTGATATTCACCAAGCCATTGACGGAGCAGCACGTCACCGGGCTGCTGCTGATCTCCATGGGCATCGTGCTGAAGCTCCTGCTGGAGAACAAGGAGAACGTCCCGCGCAGGCAGGTGAGGAAGACGGTGCAGCATTGGGACGACAAGCAGCGGGAGATCAGAGAAGTAGAAGAGGAGAAAGCTCCCTTGGTATGACCATTTTTTTAGTTGGCCCAAGCAAAGGCTGAACGAATCACAATACACCAATTGCAGGACAGGATAGAAAATGCTCAAAAAAGAGTAACAACCCCTCTCCCTCTGTCTCTCTCATGTAATGTTTTGCTGTTGTGAGATTGTTTTGTGGGTCTATGCCAAAGGATTCGATTGACGATAATTACAGATTAATTTG ] [+] EMBL AK060919 [ AGTGCGTGTGTGAGAGAGAGGGAGGCGGCCATGACCGGAGGGGAGGAGCAGGGGAGGAGGCTGTTTGGCGTGTCGCTGACAGACAGGCCCAGGTGGCAGCAGTTCTTGATCTGCTCATCGGGGTTCTTCTTCGGCTACCTTGTCAATGGCATCTGCGAGGAATACGTCTACAACCGGCTTCAGTTCAGCTTCGGCTGGTACTTCACATTTGTGCAGGGGTTCGTGTACTTGGGTCTGATTCGCCTGCAGGGATTCACGGTGAAGCAGATGGTGAACCCGTGGCGGACGTACGTGCGGCTCTCGGCTGTGCTCATGGGATCCCATGGCCTCACCAAGGGTTCCCTCGCATTCCTCAACTACCCCGCCCAAATTATGTTCAAATCCACCAAGGTTTTGCCAGTGATGATAATGGGAGCATTTATACCTGGATTAAGAAGAAAATATCCGTTCCATGAGTACATATCAGCAGTGATGCTTGTTATCGGCCTCATACTATTCACGCTCGCGGACGCACAATCATCACCTAATTTCAGCATGATTGGTGTGGCCATGGTTTCTGGAGCGCTTGTCATGGATGCATTTCTAGGTAATCTGCAAGAAGCCATATTTAAGATGAACCCTGACACCACACAGATGGAGATGTTGTTCTGCTCAACTGTTGTTGGCCTACCTTTCTTGGTGGTGCCAATGGTGTTAACAGGGGAGCTGATGCGGGCGTGGACTGCATGTTCCCAGCATATGTACGTGTACGCCGTGCTGGTGTTCGAGGCGATGGCCACGTTCGTCGGCCAGGTCTCGGTGCTCTCCCTCATCGCGCTCTTCGGCGCCGCAACAACAGCTATGGTGACGACGGCGAGGAAGGCGGTGACCCTGCTCCTGTCGTACCTGATATTCACCAAGCCATTGACGGAGCAGCACGTCACCGGGCTGCTGCTGATCTCCATGGGCATCGTGCTGAAGCTCCTGCTGGAGAACAAGGAGAACGTCCCGCGCAGGCAGGTGAGGAAGACGGTGCAGCATTGGGACGACAAGCAGCGGGAGATCAGAGAAGTAGAAGAGGAGAAAGCTCCCTTGGTATGACCATTTTTTTAGTTGGCCCAAGCAAAGGCTGAACGAATCACAATACACCAATTGCAGGACAGGATAGAAAATGCTCAAAAAAGAGTAACAACCCCTCTCCCTCTGTCTCTCTCATGTAATGTTTTGCTGTTGTGAGATTGTTTTGTGGGTCTATGCCAAAGGATTCGATTGACGATAATTACAGATTAATTTG ] [-] EMBL CB679455 [ ACNTAATTTCAGCATGATTGGTGTGGCCATGGTTTCTGGAGCGCTTGTCATGGATGCATTTCTAGGTAATCTGCAAGAAGCCATATTTAAGATGAACCCTGACACCACACAGATGGAGATGTTGTTCTGCTCAACTGTTGTTGGCCTACCTTTCTTGGTGGTGCCAATGGTGTTAACAGGGGAGCTGATGCGGGCGTGGACTGCATGTTCCCAGCATATGTACGTGTACGCCGTGCTGGTGTTCGAGGCGATGGCCACGTTCGTCGGCCAGGTCTCGGTGCTCTCCCTCATCGCGCTCTTCGGCGCCGCAACAACAGCTATGGTGACGACGGCGAGGAAGGCGGTGACCCTGCTCCTGTCGTACCTGATATTCACCAAGCCATTGACGGAGCAGCACGTCACCGGGCTGCTGCTGATCTCCATGGGCATCGTGCTGAAGCTCCTGCTGGAGAACAAGGAGAACGTCCCGCGCAGGCAGGTGAGGAAGACGGTGCAGCATTGGGACGACAAGCAGCGGGAGATCAGAGAAGTAGAAGAGGAGAAAGCTCCCTTGGTATGACCATTTTTTTAGTTGGCCCAAGCAAAGGCTGAACGAATCACAATACACCAATTGCAGGACAGGATAGAAAATGCTCAAAAAAGAGTAACAACCCCTCTCCCTCTGTCTCTCTCATGTAATGTTTTGCTGTTGTGAGATTGTTTAGGGGGTCTATGCCAAAGGATTCG ] [-] EMBL CB646147 [ GGGGTGGCCATGGTTTTTGGAGCGCTTGTCATGGATGCATTTCTAGGTAATCTGCAAGAAGCCATATTTAAGATGAACCCTGACACCACACAGATGGAGATGTTGTTCTGCTCAACTGTTGTTGGCCTACCTTTCTTGGTGGTGCCAATGGTGTTAACAGGGGAGCTGATGCGGGCGTGGACTGCATGTTCCCAGCATATGTACGTGTACGCCGTGCTGGTGTTCGAGGCGATGGCCACGTTCGTCGGCCAGGTCTCGGTGCTCTCCCTCATCGCGCTCTTCGGCGCCGCAACAACAGCTATGGTGACGACGGCGAGGAAGGCGGTGACCCTGCTCCTGTCGTACCTGATATTCACCAAGCCATTGACGGAGCAGCACGTCACCGGGCTGCTGCTGATCTCCATGGGCATCGTGCTGAAGCTCCTGCTGGAGAACAAGGAGAACGTCCCGCGCAGGCAGGTGAGGAAGACGGTGCAGCATTGGGACGACAAGCAGCGGGAGATCAGAGAAGTAGAAGAGGAGAAAGCTCCCTTGGTATGACCATTTTTTTAGTTGGCCCAAGCAAAGGCTGAACGAATCACAATACACCAATTGCAGGACAGGATAGAAAATGCTCAAAAAAGAGTAACAACCCCTCTCCCTCTGTCTCTCTCATGTAATGTTTTGCTGTTGTGAGATTGTTTTGTGGGTCTATGCCAAAGGATTCGATTGACGATAATTACAGATTATTTTAGGTGGAGGTG ] [-] EMBL CB670687 [ TGTGGCCATGGTTTCTGGAGCGCTTGTCATGGATGCATTTCTAGGTAATCTGCAAGAAGCCATATTTAAGATGAACCCTGACACCACACAGATGGAGATGTTGTTCTGCTCAACTGTTGTTGGCCTACCTTTCTTGGTGGTGCCAATGGTGTTAACAGGGGAGCTGATGCGGGCGTGGACTGCATGTTCCCAGCATATGTACGTGTACGCCGTGCTGGTGTTTGAGGCGATGGCCACGTTCGTCGGCCAGGTTTTGGTGATCTCCCTCATCGCGCTTTTCGGCGCCGCAACAACAGCTATGGTGACGACGGCGAGGAAGGCGGTGACCCTGCTCCTGTCGTACCTGATATTCACCAAGCCATTGACGGAGCAGCACGTCCCCGGGCTGCTGTTGATTTCCATGGGCATCGTGCTGAAGCTTTTGCTGGAGAACAAGGAGAACGTTCCGCGCAGGCAGGTGAGGAAGACGGTGCAGCATTGGGATGACAAGCAGCGGGAGATCAGAGAAGTAGAAGAGGAGAAAGCTCCCTTGGTATGACCATTTTTTTAGTTGGCCCAAGCAAAGGCTGAACGAATCACAATACACCAATTGCAGGGCAGGATAGAAAATGCTCAAAAAAGAGTAACAACCCCTCTCCCTCTGTCTTTTTCATGTAATGTTTTGCTGTTGCGAGATTGTTTTGTGGGTCTATGCCAAAGGATTCGATTGACGATAAGTACAGATTAATTTGGTTGGAGGTGAACAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||