These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11411#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2916 fasta sequence [TTCTCATAGTTATCCCCGCCTTTCTCTCCTCCATTGGAGGATTAGAACGGAGAGAGAGGAAGGTGGGGAAAATTGTTAGATTTGTTCATCCATTATATTTTCTTGAAAGGAAAAGGAAGGCGAAGGAATTCAGGTATTTGCATCACATCACAATCTGCAAAGCAGGAATACCTGAAACTCTCATCCAGAGTTGACGAAATCATGTCAACTTAGAATGATATCAAGGCTCTTGTTACATTCAGAAGATCAGGGCTTCAGGCCCTGCTTGTTTGTTGCTGGATGAAGACATTCACCAGGAAACCACTGCAAAGTGCAGTGCACGTACAATTCCTTCGATCAAGTGGAAGGGCATTTCATGGGCTTATAGATCAACTTTGTTCCAAATGTCCTAAACATGATGATGGTGCCACTTTGCAAAGTGAAACCACTTCAAGCAAGTTCATGTGTTTATACAAGTTCTTCAGGACATCAAGTGAAGGTGACACTGCAGCTGTAGACAATGTATTGCGCAATGATGGAAATACAGAAGTTGTCGCTATCCAGTCGAAAGAAAATGGTCGCAATTCTAATAACATATTGGAGGATGGAGAGAAGTCAGTTCTGTCGTCGGATCATTCTAAAAAATTGAGTGCACATCATCGACTGAAAATCTGGATTACTAGTGGACACAGTGGCATAATCGGAAGATACGGAAAGAAGTTGGAGCTAAATGCTGCCAATGTGCCTAAGCAGTTCCCAAGTGAACATGTGAATACTGTATGGCCAGATTGGCTCATGAAGGTGGCCCCTGAGGCAGTGCAAGGCTGGTTCCCTCGTCGTGCAGAATCATTTGAGAAATTAGGCAAGATTGGAGAAGGAACTTATAGTAGTGTGTACAAAGCTCGAGATCTTAAAACAGGCAAGATTGTTGCTCTCAAGAAGGTGCGGTTTGTCAATTTGGATCCTGAAAGTGTGCGCTTTATGGCAAGAGAAATACTTGTTCTTCGGAAACTGAATCATCCGAATGTCATAAAGTTGGAAGGGATCATAGCATCTCCTGTTTCAACAAGTTTGTATCTTGTATTTGAATACATGGAACATGACCTTACTGGTCTTGCTGCAACTCCAGGCCTCAAGTTCACTGAACCACAGGTAAAGTGCTTGATGCAACAATTGCTTAGTGGCCTTGATCACTGCCACAGCAATGGAGTTCTTCATCGAGACTTGAAGGGTTCCAACCTCTTGATTGACAGCAATGGTGTCTTGAAGATTGCAGACTTTGGTCTAGCAACATTTTATGATCCTAACAATCAGCAACCACTCACAAGCCGTGTTGCAACATTGTGGTACAGGCCACCGGAACTTCTGCTTGGTGCCACTAAGTATGGAGTTTCTGTGGATATGTGGAGTACTGGGTGCATTCTGGCAGAATTGCTTGCTAGCAAGCCAATCATGCCAGGAAGAACTGAGGTAGAGCAAATTCACAAGATCTTCAAGCTCTGTGGATCACCCTCTGATGAGTACTGGCAGAAACTGAACGTGCCCCAGACAGGGATGTTCAAGCCCTCTCGCCAGTATAGGCGGTGTATTGCAGATAATTTCAAACATTTCCCTCAGCCAGCTATAGTTCTTCTAGATAATTTGCTTGCATTAGAACCAGAAGCTCGTGGAACAGCTGCCTCGACTCTCCAGAGTGACTTTTTCAGAAGAAAGCCACTTGCTTGCAGCCCTTCAAGCTTACCAAAGTTTCCACCGAGCAAAGAATACGATGCAAGACTCAAGCTAGAGGAAGCTAGGAGGCAAAGAAAGGTTGGAGGATCTGTTAGACCTGGAAGAGAGAACGTTAGAATAAATCGTGGTAATGGCTCTATCCAACCAAAGAAACATACATATATCAGTGGAAATCTCCACCCGCAAGGTGATCCACGGACATTAGCTACAAGGGTGCGATCTCCTGGACTTAACGCCACATGGAACAACAGGGGTGATTCAATGACGGTCGTGAAGTACCTGGATGTAAGTACAACTCTGTGCGGATAGCATATTCCACTATCTTGACGACAAGGAGCTCAGACTTGCTTCAACCTGAACCAACTGATGTAATGAATAAGATGCATGGTTCTCCCAAGAACGACCTGGGAGAGAAGGGCCAGACTGGGAGCTGTAGGGTTAAGAACAGAACGCATCACTCTGGTTCACTGGTTACACCAGAAGGAAACATAGAGGAGATGCTCAAGGAGCATGACAGGAACATCCAAGCAGCCATGCGCAAAGCACGCCTTAACAAGAAGAAATAGTTGTGACATTTAGGTGTGTTCAAGCTAAAGATCCCAACTTTTCCAAGTTCCAGTTGAGGAATGGCAGGGCTGCATTCTTGCACAGAGCACAGAGCTTCTTCAAAAGGATCAAGATCAAACCTGAAATGTCGATACAATACGAGAGTTTGGGCATGGACATTATTTCAAATGACAGGTTGTCCTTTGAACCTGAAATTCTTGACTGATGGCAGTGAGAGATCCAGATCATGCCGGAGCAACTAAGAAGAAATTTCGACAACATTGAGTCATGGATAGGTACATCTTACAGTTACAAAGTATGAGCAGCACTGCGGAAGAGGAGGCCAAACAGAGTGCCAGGGATATCCGAAAGCGTAGACTGGCCTTTATTCTTGCCTGAATTCTTGTTTCACCAAGCTTCTGTGGTCTTTCCCCTTGTTATGGCTGTTCTAACCCATGCCATCTGCATCTGGTGTTGCTAGACGGGCTTGTATAAACTTTTCATCCTCTTATTTCTCTTGTTTTTCTTCTTGCAAGGGTCTTATATAAACTGTGCATTCTTTGTCCAGTTTTTTGGCTGTGTGCATTCTATGCAGAGGCCGGGGGTGGACTCAGTTGGAATGTATCATCTTGGTGTATTTAACTGAGTCTTAATAAAACT] [+] EMBL AK068916 [TTCTCATAGTTATCCCCGCCTTTCTCTCCTCCATTGGAGGATTAGAACGGAGAGAGAGGAAGGTGGGGAAAATTGTTAGATTTGTTCATCCATTATATTTTCTTGAAAGGAAAAGGAAGGCGAAGGAATTCAGGTATTTGCATCACATCACAATCTGCAAAGCAGGAATACCTGAAACTCTCATCCAGAGTTGACGAAATCATGTCAACTTAGAATGATATCAAGGCTCTTGTTACATTCAGAAGATCAGGGCTTCAGGCCCTGCTTGTTTGTTGCTGGATGAAGACATTCACCAGGAAACCACTGCAAAGTGCAGTGCACGTACAATTCCTTCGATCAAGTGGAAGGGCATTTCATGGGCTTATAGATCAACTTTGTTCCAAATGTCCTAAACATGATGATGGTGCCACTTTGCAAAGTGAAACCACTTCAAGCAAGTTCATGTGTTTATACAAGTTCTTCAGGACATCAAGTGAAGGTGACACTGCAGCTGTAGACAATGTATTGCGCAATGATGGAAATACAGAAGTTGTCGCTATCCAGTCGAAAGAAAATGGTCGCAATTCTAATAACATATTGGAGGATGGAGAGAAGTCAGTTCTGTCGTCGGATCATTCTAAAAAATTGAGTGCACATCATCGACTGAAAATCTGGATTACTAGTGGACACAGTGGCATAATCGGAAGATACGGAAAGAAGTTGGAGCTAAATGCTGCCAATGTGCCTAAGCAGTTCCCAAGTGAACATGTGAATACTGTATGGCCAGATTGGCTCATGAAGGTGGCCCCTGAGGCAGTGCAAGGCTGGTTCCCTCGTCGTGCAGAATCATTTGAGAAATTAGGCAAGATTGGAGAAGGAACTTATAGTAGTGTGTACAAAGCTCGAGATCTTAAAACAGGCAAGATTGTTGCTCTCAAGAAGGTGCGGTTTGTCAATTTGGATCCTGAAAGTGTGCGCTTTATGGCAAGAGAAATACTTGTTCTTCGGAAACTGAATCATCCGAATGTCATAAAGTTGGAAGGGATCATAGCATCTCCTGTTTCAACAAGTTTGTATCTTGTATTTGAATACATGGAACATGACCTTACTGGTCTTGCTGCAACTCCAGGCCTCAAGTTCACTGAACCACAGGTAAAGTGCTTGATGCAACAATTGCTTAGTGGCCTTGATCACTGCCACAGCAATGGAGTTCTTCATCGAGACTTGAAGGGTTCCAACCTCTTGATTGACAGCAATGGTGTCTTGAAGATTGCAGACTTTGGTCTAGCAACATTTTATGATCCTAACAATCAGCAACCACTCACAAGCCGTGTTGCAACATTGTGGTACAGGCCACCGGAACTTCTGCTTGGTGCCACTAAGTATGGAGTTTCTGTGGATATGTGGAGTACTGGGTGCATTCTGGCAGAATTGCTTGCTAGCAAGCCAATCATGCCAGGAAGAACTGAGGTAGAGCAAATTCACAAGATCTTCAAGCTCTGTGGATCACCCTCTGATGAGTACTGGCAGAAACTGAACGTGCCCCAGACAGGGATGTTCAAGCCCTCTCGCCAGTATAGGCGGTGTATTGCAGATAATTTCAAACATTTCCCTCAGCCAGCTATAGTTCTTCTAGATAATTTGCTTGCATTAGAACCAGAAGCTCGTGGAACAGCTGCCTCGACTCTCCAGAGTGACTTTTTCAGAAGAAAGCCACTTGCTTGCAGCCCTTCAAGCTTACCAAAGTTTCCACCGAGCAAAGAATACGATGCAAGACTCAAGCTAGAGGAAGCTAGGAGGCAAAGAAAGGTTGGAGGATCTGTTAGACCTGGAAGAGAGAACGTTAGAATAAATCGTGGTAATGGCTCTATCCAACCAAAGAAACATACATATATCAGTGGAAATCTCCACCCGCAAGGTGATCCACGGACATTAGCTACAAGGGTGCGATCTCCTGGACTTAACGCCACATGGAACAACAGGGGTGATTCAATGACGGTCGTGAAGTACCTGGATGTAAGTACAACTCTGTGCGGATAGCATATTCCACTATCTTGACGACAAGGAGCTCAGACTTGCTTCAACCTGAACCAACTGATGTAATGAATAAGATGCATGGTTCTCCCAAGAACGACCTGGGAGAGAAGGGCCAGACTGGGAGCTGTAGGGTTAAGAACAGAACGCATCACTCTGGTTCACTGGTTACACCAGAAGGAAACATAGAGGAGATGCTCAAGGAGCATGACAGGAACATCCAAGCAGCCATGCGCAAAGCACGCCTTAACAAGAAGAAATAGTTGTGACATTTAGGTGTGTTCAAGCTAAAGATCCCAACTTTTCCAAGTTCCAGTTGAGGAATGGCAGGGCTGCATTCTTGCACAGAGCACAGAGCTTCTTCAAAAGGATCAAGATCAAACCTGAAATGTCGATACAATACGAGAGTTTGGGCATGGACATTATTTCAAATGACAGGTTGTCCTTTGAACCTGAAATTCTTGACTGATGGCAGTGAGAGATCCAGATCATGCCGGAGCAACTAAGAAGAAATTTCGACAACATTGAGTCATGGATAGGTACATCTTACAGTTACAAAGTATGAGCAGCACTGCGGAAGAGGAGGCCAAACAGAGTGCCAGGGATATCCGAAAGCGTAGACTGGCCTTTATTCTTGCCTGAATTCTTGTTTCACCAAGCTTCTGTGGTCTTTCCCCTTGTTATGGCTGTTCTAACCCATGCCATCTGCATCTGGTGTTGCTAGACGGGCTTGTATAAACTTTTCATCCTCTTATTTCTCTTGTTTTTCTTCTTGCAAGGGTCTTATATAAACTGTGCATTCTTTGTCCAGTTTTTTGGCTGTGTGCATTCTATGCAGAGGCCGGGGGTGGACTCAGTTGGAATGTATCATCTTGGTGTATTTAACTGAGTCTTAATAAAACT] consensusID : consensus_11411#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 848 fasta sequence [CAGCTTCCTCGACGGCTCGACGCCATGGCGCGCCGCCGCGGCCCGCGGCCCAAGCCGCCATTATCCGCTCGACGAACGTCGCCGCGTCGCGCTCTTCCCGGGGGCTCTCTCTTTTGCCGGTCTCTGTAGGGCTCCACTAATGGCGAAAACGCGGCGCGGCACGTCAGTCGCCAAGGGTTCGGGAGATAAGAGGCCATCCACTTATCCACCCTAGCCTCCTCTGTAGGGAAGACCCCCGCCGAACGCTGCGCCGGTCGTCGCCGGAGTCCGGGCTCAGCAGATCGA-CCCCCCGTAGAGTCATTAAGGAAAGGGTTTGAGTGCTCAGATGGGGTGAGAAGAAGCTATCCAAGGCGGCGCAGACGTTGTATCG-----AAATACATTATTAAGGCGACCAAGAGAGAAGAAGTCGAGACAACTCCGGTAAGGATG-ATTGGTCCTTCAAAACTGGCAAAGATGCAGCTTGGACATCATCACCCATGGGATCCCTGACGTGGAGGACGAGCCGTGTGGTGTAGCTTGGATGGACGGCATTGAAATCTTCCACGGCCAACGACATGCTTGTGCGTGCGACCTTGGCCACCGTCGTCCCCAGGTCAAGTACCACCCCAACATGGAATTCCTCTGCCTTTCTTTCTGTAACACTTCCAGCAAATGCAAAGCTGAATGCTAACAAGAGTAGGAGCGGTGCAGTTCTAGCACATGCTGCCATTTTTCTTCAGGTAGTATGAGGTCGTCTGCAAAAAAAACTCTTTGCCCTGTTGGCTATGGCGTTTATTTATAGATCCTTTTGAGCCATCTGTCAGGTTGCTTGCGGTCCTTATAAAAAATTTATTGATTTGTGAATAAAAAA] [+] EMBL CF314219 [CAGCTTCCTCGACGGCTCGACGCCATGGCGCGCCGCCGCGGCCCGCGGCCCAAGCCGCCATTATCCGCTCGACGAACGTCGCCGCGTCGCGCTCTTCCCGGGGGCTCTCTCTTTTGCCGGTCTCTGTAGGGCTCCACTAATGGCGAAAACGCGGCGCGGCACGTCAGTCGCCAAGGGTTCGGGAGATAAGAGGCCATCCACTTATCCACCCTAGCCTCCTCTGTAGGGAAGACCCCCGCCGAACGCTGCGCCGGTCGTCGCCGGAGTCCGGGCTCAGCAGATCGA CCCCCCGTAGAGTCATTAAGGAAAGGGTTTGAGTGCTCAGATGGGGTGAGAAGAAGCTATCCAAGGCGGCGCAGACGTTGTATCG AAATACATTATTAAGGCGACCAAGAGAGAAGAAGTCGAGACAACTCCGGTAAGGATGAATTGGTCCTTCAAAACTGGCAAAGATGCAGCTTGGACATCATCACCCATGGGATCCCTGACGTGGAGGACGAGCCGTGTGGTGTAGCTTGGATGGACGGCATTGAAATCTTCCACGGC ] [+] EMBL CF334967 [ AGCTTCCTCGACGGCTCGACGCCATGGCGCGCCGCCGCGGCCCGCGGCCCAAGCCGCCATTATCCGCTCGACGAACGTCGCCGCGTCGCGCTCTTCCCGGGGGCTCTCTCTTTTGCCGGTCTCTGTAGGGCTCCACTAATGGCGAAAACGCGGCGCGGCACGTCAGTCGCCAAGGGTTCGGGAGATAAGAGGCCATCCACTTATCCACCCTAGCCTCCTCTGTAGGGAAGACCCCCGCCGAACGCTGCGCCGGTCGTCGCCGGAGTCCGGGCTCAGCAGATCGA CCCCCCGTAGAGTCATTAAGGAAAGGGTTTGAGTGCTCAGATGGGGTGAGAAGAAGCTATCCAAGGCGGCGCAGACGTTGTATCGGTTCCAAATACATTATTAAGGCGACCAAGAGAGAAGAAGTCGAGACAACTCCGGTAAGGATG ATTGGTCCTTCAAAACTGGCAAAGATGCAGCTTGGACATCATC ] [+] EMBL CA755007 [ GCGCGCCGCCGCGGCCCGCGGCCCAAGCCGCCATTATCCGCTCGACGAACGTCGCCGCGTCGCGCTCTTCCCGGGGGCTCTCTCTTTTGCCGGTCTCTGTAGGGCTCCACTAATGGCGAAAACGCGGCGCGGCACGTCAGTCGCCAAGGGTTCGGGAGATAAGAGGCCATCCACTTATCCACCCTAGCCTCCTCTGTAGGGAAGACCCCCGCCGAACGCTGCGCCGGTCGTCGCCGGAGTCCGGGCTCAGCAGATCGA CCCCCCGTAGAGTCATTAAGGAAAGGGTTTGAGTGCTCACATGGGGTGAGAAGAAGCTATCCCAGGCGGCGCAGACCTTGTATCG AAATACATTATTAAGGCGACCAAGAGAGAAGAAGTCGAGACAACTCCNGTGAGGATG ATTGGTCCTTCAAAACTGGCAAAGATGCAGCTTGGACATCATCACCCATGGAATCCCTGACGTGGAGGACGAGCCGTGTGGTGTAACTTGGATGGACGGCATTGAAATCTTCCACGGCCAACGACATGCTTGTGCGTGCGACCTTGGGC CCGTCGTCCCC GGTCA ] [-] EMBL CF334968 [ GCCGGTCGTCGCCGGAGTCCGGGCTCAGCAGATCGACCCCCCCGTAGAGTCATTAAGGAAAGGGTTTGAGTGCTCAGATGGGGTGAGAAGAAGCTATCCAAGGCGGCGCAGACGTTGTATCGGTTCCAAATACATTATTAAGGCGACCAAGAGAGAAGAAGTCGAGACAACTCCGGTAAGGATG ATTGGTCCTTCAAAACTGGCAAAGATGCAGCTTGGACATCATCACCCATGGAATCCCTGACGTGGAGGACGAGCCGTGTGGTGTAGCTTGGATGGACGGCATTGAAATCTTCCACGGCCAACGACATGCTTGTGCGTGCGACCTTGGCCACCGTCGTCCCCAGGTCAAGTACCACCCCAACATGGAATTCCTCTGCCTTTCTTTCTGTAACACTTCCAGCAAATGCAAAGCTGAATGCTAACAAGAGTAGGAGCGGTGCAGTTCTAGCACATGCTGCCATTTTTCTTCAGGTAGTATGAGGTCGTCTGCAAAAAAAA ] [-] EMBL CF314220 [ TAAGGAAAGGGTTTGAGTGCTCAGATGGGGTGAGAAGAAGCTATCCAAGGCGGCGCAGACGTTGTATCG AAATACATTATTAAGGCGACCAAGAGAGAAGAAGTCGAGACAACTCCGGTAAGGATG ATTGGTCCTTCAAAACTGGCAAAGATGCAGCTTGGACATCATCACCCATGGGATCCCTGACGTGGAGGACGAGCCGTGTGGTGTAGCTTGGATGGACGGCATTGAAATCTTCCACGGCCAACGACATGCTTGTGCGTGCGACCTTGGCCACCGTCGTCCCCAGGTCAAGTACCACCCCAACATGGAATTCCTCTGCCTTTCTTTCTGTAACACTTCCAGCAAATGCAAAGCTGAATGCTAACAAGAGTAGGAGCGGTGCAGTTCTAGCACATGCTGCCATTTTTCTTCAGGTAGTATGAGGTCGTCTGCAGAAGAATCTCTTTGCCCTGTTGGCTATGGCGTTTATTTATAGATCCTTTTGAGCCATCTGTCAGGTTGCTTGCGGTCCTTATAAAAAATTTATTGATTTGTGAATAAAAAA] consensusID : consensus_11411#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 649 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTAAATAAAGGAAGCTTTATTAAGACTCGGTTAAATACACCAAGATGATACATTCCAACTGAGTCTACCCCCGGCCTTTGCATAGAATGCACACAGCCAAAAAACTGGACCTAAGAAGACTTCCTCATCACAAAACACAGAAACTAGTGACTAT--CAATCTGTAGACTAGATCGCCACCCATGCTCCTGGGTGAAAAACTCCTGTGCCACCTGGTCCAAACGTTGCGATACCACAGCAATAGTATCCCGAAGTCCCGCAATAGTATTACCAAAAGAAATACCACCAATTGCTAAAAGAGAGAGATAGTACGGAACCGATACAACGTCTGCGCCGCCTTGGATAGCTTCTTCTCACCCCATCTGAGCACTCAAACCCTTTCCTTAATGACTCTACGGGGGGGTCGATCTGCTGAGCCCGGACTCCGGCGACGACCGGCGCAGCGTTCGGCGGGGGGCTTCCCTACAGAGGAGGCTAGGGTGGATAAGTGGATGGCCTCTTATCTCCCGAACCCTTGGCGACTGACGTGCCGCGCCGCGTTTTCGCCATTAGTGGAGCCCTACAGAGACCGGCAAAAGAGAGAGCCCCCGGGAAGAGCGCGACGCGGCGACGTTCGTCGAGCGGATAAT] [-] EMBL AU082376 [TTTTTTTTTTTTTTTTTTTTTTTTTAAATAAAGGAAGCTTTATTAAGACTCGGTTAAATACACCAAGATGATACATTCCAACTGAGTCTACCCCCGGCCTTTGCATAGAATGCACACAGCCAAAAAACTGGACCTAAGAAGACTTCCTCATCACAAAACACAGAAACTAGTGACTATCGCAACGTTTGGACCAGGTGGCa ] [+] EMBL CF337455 [ TTTTTTTTAAATAATGGAAGCTTTATTAAGACTCGGTTAAATACACCAAGATGATACATTCCAACTGAGTCTACCCCCGGCCTTTGCATAGAATGCACACAGCCAAAAAACTGGACCTAAGAAGACTTCCTCATCACAAAACACAGAAACTAGTGACTAT CAATCTGTAGACTAGATCGCCACCCATGCTCCTGGGTGAAAAACTCCTGTGCCACCTGGTCCAAACGTTGCGATACCACAGCAATAGTATCCCGAAGTCCCGCAATAGTATTACCAAAAGAAATACCACCAATTGCTAAAAGAGAGAGATAGTACGGAACCGATACAACGTCTGCGCCGCCTTGGATAGCTTCTTCTCACCCCATCTGAGCACTCAAACCCTTTCCTTAATGACTCTACGGGGGGGTCGATCTGCTGAGCCCGGACTCCGGCGACGACCGGCGCAGCGTTCGGCGGGGGG ] [-] EMBL CF317992 [ AATCTGTAGACTAGATCGCCACCCATGCTCCTGGGTGAAAAACTCCTGTGCCACCTGGTCCAAACGTTGCGATACCACAGCAATAGTATCCCGAAGTCCCGCAATAGTATTACCAAAAGAAATACCACCAATTGCTAAAAGAGAGAGATAGTACGGAACCGATACAACGTCTGCGCCGCCTTGGATAGCTTCTTCTCACCCCATCTGAGCACTCAAACCCTTTCCTTAATGACTCTAC GGGGGGTCGATCTGCTGAGCCCGGACTCCGGCGACGACCGGCGCAGCGTTCGGCGGGGGTCTTCCCTACAGAGGAGGCTAGGGTGGATAAGTGGATGGCCTCTTATCTCCCGAACCCTTGGCGACTGACGTGCCGCGCCGCGTTTTCGCCATTAGTGGAGCCCTACAGAGACCGGCAAAAGAGAGAGCCCCCGGGAAGAGCGCGACGCGGCGACGTTCGTCGAGCGGATAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 TTCTCATAGTTATCCCCGCCTTTCTCTCCTCCATTGGAGGATTAGAACGGAGAGAGAGGA 60 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 AGGTGGGGAAAATTGTTAGATTTGTTCATCCATTATATTTTCTTGAAAGGAAAAGGAAGG 120 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 CGAAGGAATTCAGGTATTTGCATCACATCACAATCTGCAAAGCAGGAATACCTGAAACTC 180 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 TCATCCAGAGTTGACGAAATCATGTCAACTTAGAATGATATCAAGGCTCTTGTTACATTC 240 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 AGAAGATCAGGGCTTCAGGCCCTGCTTGTTTGTTGCTGGATGAAGACATTCACCAGGAAA 300 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 CCACTGCAAAGTGCAGTGCACGTACAATTCCTTCGATCAAGTGGAAGGGCATTTCATGGG 360 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 CTTATAGATCAACTTTGTTCCAAATGTCCTAAACATGATGATGGTGCCACTTTGCAAAGT 420 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 GAAACCACTTCAAGCAAGTTCATGTGTTTATACAAGTTCTTCAGGACATCAAGTGAAGGT 480 consensus_11411#1 -------------------------------------------------------CAGCT 5 consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 GACACTGCAGCTGTAGACAATGTATTGCGCAATGATGGAAATACAGAAGTTGTCGCTATC 540 consensus_11411#1 TCCTCGACGGCTCGACGCCATGGCGCGCCGCCGCGGCCCGCGGCCCAAGCCGCCATTATC 65 consensus_11411#2 ----------------TTTTTTTTTTTTTTTTTTTTTTTTTAAATAAAGGAAGCTTTATT 44 consensus_11411#0 CAGTCGAAAGAAAATGGTCGCAATTCTAATAACATATTGGAGGATGGAGAGAAGTCAGTT 600 ** * consensus_11411#1 CG--C-TCGACGAACGTCGCCGCGTCGCGCTCTTCCCGGGGGCTCTCTCTTTTGCCGGTC 122 consensus_11411#2 AAGAC-TCGGTTAAATACACCAAGATGATACATTCC----AACTGAGTCTACCCCCGGCC 99 consensus_11411#0 CTGTCGTCGGATCATTCTAAAAAATTGAGTGCACATCATCGACTGAAAATCTGGATTACT 660 * *** * * ** * consensus_11411#1 TCTGTA-GGGCTC-CACTAATGGCGAAAACGCGGCGCGGCACG--TCAGTCGCCAAGGGT 178 consensus_11411#2 TTTGCATAGAATG-CACACAGCCAAAAAACTGGACCTAAGAAGACTTCCTCATCACAAAA 158 consensus_11411#0 AGTGGACACAGTGGCATAATCGGAAGATACGGAAAGAAGTTGGAGCTAAATGCTGCCAAT 720 ** * * ** * ** * consensus_11411#1 TCGGGAGATAAGAGGCCA--TCCACTTAT--CCACCCTA--GCCTCCT------CTGTAG 226 consensus_11411#2 CACAGAAACTAGTGACTA--TCAATCTGT--AGACTAGATCGCCACCCATGCTCCTGGGT 214 consensus_11411#0 GTGCCTAAGCAGTTCCCAAGTGAACATGTGAATACTGTATGGCCAGATTGGCTCATGAAG 780 * ** * * * * * * ** * *** ** consensus_11411#1 GGAAGACCC----CCGCCGAACGCTGCGCCGGTCGT--CGCCGGAGTCCGGGCTCAGCAG 280 consensus_11411#2 GAAAAACTC----CTGTGCCAC-CTGGTCCAAACGT--TGCGATACCACAGCAATAGTAT 267 consensus_11411#0 GTGGCCCCTGAGGCAGTGCAAGGCTGGTTCCCTCGTCGTGCAGAATCATTTGAGAAATTA 840 * * * * * *** * *** ** * * consensus_11411#1 ATCGACCCCCCGTAGAGTCATTAAGGAAAGGGTT--------TGAGTGCTCAGATGGGGT 332 consensus_11411#2 CCCGAAGTCCCGCAATAGTATTACCAAAAGAAATACCA---CCAATTGCTAAAAGAGAGA 324 consensus_11411#0 GGCAAGATTGGAGAAGGAACTTATAGTAGTGTGTACAAAGCTCGAGATCTTAAAACAGGC 900 * * * *** * * * ** * * * consensus_11411#1 GAGAAGAAGCTATCCAAGGCGGCGCA-GACGTTGTATCGAAA--TACATTAT-TAAGGCG 388 consensus_11411#2 GATAGTACGGAA-CCGATACAACGTC-TGCGCCGCCTTGGAT--AGCTTCTTCTCACCCC 380 consensus_11411#0 AAGATTGTTGCTCTCAAGAAGGTGCGGTTTGTCAATTTGGATCCTGAAAGTGTGCGCTTT 960 * * * * * * * * * consensus_11411#1 ACCAAGAGAGAAGAAGTCGAGAC--AACTCCGGTA-AGGATGATTG--GTCCTTCAAAAC 443 consensus_11411#2 ATCTGAGCACTCAAACCCTTTCCTTAATGACTCTACGGGGGGGTCG--ATCTGCTGAGCC 438 consensus_11411#0 ATGGCAAGAGAAATACTTGTTCTTCGGAAACTGAATCATCCGAATGTCATAAAGTTGGAA 1020 * * * * * * * * consensus_11411#1 TGG--CAAAGATGCAGCTTGGACATCA---T-CACCCATGGGATCCCTGACGTGGAGGAC 497 consensus_11411#2 CGGACTCCGGCGACGACCGGCGCAGCG---TTCGGCGGGGGGCTTCCCTACAGAGGAGGC 495 consensus_11411#0 GGGATCATAGCATCTCCTGTTTCAACAAGTTTGTATCTTGTATTTGAATACATGGAACAT 1080 ** * * * ** * * * * ** * consensus_11411#1 GAGCCGTGTGGTGTAGCTTGGATGGACGGCAT-TGAAATCTTCCACGGCCAACGACATGC 556 consensus_11411#2 TAG------GGTGGA---TAAGTGGATGGCCTCTTATCTCCCGAACCCTTGGCGACTGAC 546 consensus_11411#0 GACCTTACTGGTCTTGCTGCAACTCCAGGCCTCAAGTTCACTGAACCACAGGTAAAGTGC 1140 * *** *** * ** * * consensus_11411#1 TTGT-GCGTGC----------GACCTTGGCCACCGTCGTCCCCAGGTCAAGTACCACCCC 605 consensus_11411#2 GTGCCGCGCCG----------CGTTTTCGCCATTAGTGGAGCCCTACAGAG-ACCGGCAA 595 consensus_11411#0 TTGATGCAACAATTGCTTAGTGGCCTTGATCACTGCCACAGCAATGGAGTTCTTCATCGA 1200 ** ** ** ** * * * consensus_11411#1 AAC--ATGGAATTCCTCTGCCTTTCTTTCT-GTAAC-ACTTCCAGCAAATGCAAAGCTGA 661 consensus_11411#2 AAG--AGAGAGCCCCCGGGAAGAGCGCGAC-GCGGCGACGTTCGTCGAGCGGATAAT--- 649 consensus_11411#0 GACTTGAAGGGTTCCAACCTCTTGATTGACAGCAATGGTGTCTTGAAGATTGCAGACTTT 1260 * * ** * * consensus_11411#1 ATGCTAACAAGAGTAGGAGCGGTGCAGTTCTAGCACATGCT-GCCATTTTTCTTCAGGTA 720 consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 GGTCTAGCAACATTTTATGATCCTAACAATCAGCAACCACTCACAAGCCGTGTTGCAACA 1320 consensus_11411#1 GTATGAGGTCGTCTGCAAAAAAAACT-CTTTGCCCTGTTGGCTATGGCGTTTATTTATAG 779 consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 TTGTGGTACAGGCCACCGGAACTTCTGCTTGGTGCCACTAAGTATGGAGTTTCTGTGGAT 1380 consensus_11411#1 ATCCTTTTGAGCCATCTGTCAGGTTGCTTGCGGTCCTTATAAAAAATTTATTGATTTGTG 839 consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 ATG-TGGAGTACTGGGTGCATTCTGGCAGAATTGCTTGCTAGCAAGCCAATCATGCCAGG 1439 consensus_11411#1 AATAAAAAA--------------------------------------------------- 848 consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 AAGAACTGAGGTAGAGCAAATTCACAAGATCTTCAAGCTCTGTGGATCACCCTCTGATGA 1499 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 GTACTGGCAGAAACTGAACGTGCCCCAGACAGGGATGTTCAAGCCCTCTCGCCAGTATAG 1559 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 GCGGTGTATTGCAGATAATTTCAAACATTTCCCTCAGCCAGCTATAGTTCTTCTAGATAA 1619 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 TTTGCTTGCATTAGAACCAGAAGCTCGTGGAACAGCTGCCTCGACTCTCCAGAGTGACTT 1679 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 TTTCAGAAGAAAGCCACTTGCTTGCAGCCCTTCAAGCTTACCAAAGTTTCCACCGAGCAA 1739 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 AGAATACGATGCAAGACTCAAGCTAGAGGAAGCTAGGAGGCAAAGAAAGGTTGGAGGATC 1799 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 TGTTAGACCTGGAAGAGAGAACGTTAGAATAAATCGTGGTAATGGCTCTATCCAACCAAA 1859 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 GAAACATACATATATCAGTGGAAATCTCCACCCGCAAGGTGATCCACGGACATTAGCTAC 1919 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 AAGGGTGCGATCTCCTGGACTTAACGCCACATGGAACAACAGGGGTGATTCAATGACGGT 1979 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 CGTGAAGTACCTGGATGTAAGTACAACTCTGTGCGGATAGCATATTCCACTATCTTGACG 2039 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 ACAAGGAGCTCAGACTTGCTTCAACCTGAACCAACTGATGTAATGAATAAGATGCATGGT 2099 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 TCTCCCAAGAACGACCTGGGAGAGAAGGGCCAGACTGGGAGCTGTAGGGTTAAGAACAGA 2159 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 ACGCATCACTCTGGTTCACTGGTTACACCAGAAGGAAACATAGAGGAGATGCTCAAGGAG 2219 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 CATGACAGGAACATCCAAGCAGCCATGCGCAAAGCACGCCTTAACAAGAAGAAATAGTTG 2279 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 TGACATTTAGGTGTGTTCAAGCTAAAGATCCCAACTTTTCCAAGTTCCAGTTGAGGAATG 2339 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 GCAGGGCTGCATTCTTGCACAGAGCACAGAGCTTCTTCAAAAGGATCAAGATCAAACCTG 2399 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 AAATGTCGATACAATACGAGAGTTTGGGCATGGACATTATTTCAAATGACAGGTTGTCCT 2459 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 TTGAACCTGAAATTCTTGACTGATGGCAGTGAGAGATCCAGATCATGCCGGAGCAACTAA 2519 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 GAAGAAATTTCGACAACATTGAGTCATGGATAGGTACATCTTACAGTTACAAAGTATGAG 2579 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 CAGCACTGCGGAAGAGGAGGCCAAACAGAGTGCCAGGGATATCCGAAAGCGTAGACTGGC 2639 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 CTTTATTCTTGCCTGAATTCTTGTTTCACCAAGCTTCTGTGGTCTTTCCCCTTGTTATGG 2699 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 CTGTTCTAACCCATGCCATCTGCATCTGGTGTTGCTAGACGGGCTTGTATAAACTTTTCA 2759 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 TCCTCTTATTTCTCTTGTTTTTCTTCTTGCAAGGGTCTTATATAAACTGTGCATTCTTTG 2819 consensus_11411#1 ------------------------------------------------------------ consensus_11411#2 ------------------------------------------------------------ consensus_11411#0 TCCAGTTTTTTGGCTGTGTGCATTCTATGCAGAGGCCGGGGGTGGACTCAGTTGGAATGT 2879 consensus_11411#1 ------------------------------------- consensus_11411#2 ------------------------------------- consensus_11411#0 ATCATCTTGGTGTATTTAACTGAGTCTTAATAAAACT 2916 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||