These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11414#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2380 fasta sequence [CTCGCCTCGCCTCGCCGCGCCGCCGCGCCGCCCCAGATCCGCCCCGCCTCCGGCCATCCCCGCCGCCAGATCCGGTGGGGGAAGCCCCCTCTCTCCGCTCTCGCCCAAGGGGGGGTTGGTTTATCCGGTAGGAGGAGGAGTAGTGAGGTGGTGGTAGTGGTTTAAGCGGCCATGGCGGCGGCGGAGGAGAACAGCTCGCTGTTCCTCATATTCATCCTCACCATGATCGCGCTCCCCCTCGTGCCCTACACCATCATGCGCCTCTGCCGCGCCGCCAACGTCAAGGCCAAGACCATCCACTGCCGCTGCTCCGGCTGCCACCGCTCCGGCAAGTACCGCAAGTCGATCTACAAGAGGATATCCAACTTCTCGACATGCAGTAACCTCACCATCCTGCTTCTCTGGATAGTTATGATCTTCCTTGTATACTACATCAAGCATGTTAGCCGCGAGGTACAAGTGTTTGAGCCGTATAGCATTCTTGGACTGGAACCAGGTGCATCAGAGTCTGATATCAAGAAATCATACCGTAGACTTTCTATCCAATACCATCCTGATAAAAATCCTGATCCTGAGGCCCACAAGTACTTTGTTGAATTTATATCCAAGGCATATCAGGCTTTAACTGATCCTGTATCTCGTGAAAACTATGAGAAGTATGGTCACCCAGATGGACGCCAGGGGATGCAAATGGGCATTGCTTTGCCCAAGTTCTTGTTGAATATGGATGGTGCATCTGGTGGAATAATGCTTCTTGGAATAGTAGGGCTATGCATACTCTTGCCCTTGATGATAGCAGTTATTTATTTGTCAAGGTCATCAAAGTACACCGGAAATTATGTCATGCATCAAACTCTGTCCACTTATTACTACTTCATGAAGCCTTCACTGGCTCCAAGCAAAGTCATGGATGTCTTCATTAAGGCTGCAGAGTATATGGAGATGCCAGTCCGGCGCAGTGACGATGAACCCTTGCAGAAATTATTTGTAGCTGTTAGGAGTGAATTAAATCTAGACTTGAAGAATATTAGAACAGAACAAGCTAAATTCTGGAAGCAGCATCCATCTCTAGTGAAGATGGAGCTTTTGATTCAGGCTCACCTCACTGGAGAGTCATTTGCTTTGACACCAGCGTTACTGAAGGATTACAGGCACATGCTTGAACTTGCACCTCGTCTTCTGGATGAACTTGTCAAGATTGCACTACTACCAAGGAGTCCCCATGGTTTTGGATGGCTCAGGCCTGCAATCGGTGTAATTGAGCTTTCCCAAAATATCATCCAGGCTGTCCCTCTCAGTGCACGAAAAGCTAGCGGAGGCAACTCTGAAGGAATAGCACCTTTCTTGCAGCTACCGCATTTTACTGAAACGGTTGTCAAAAAAATTGCTCGCAAGAAAATCCGTTCATTCCAAGAATTCTGTGACATGCCTGTGGAGGAACGCGCCACGTTGCTGACACAGGTTGCTGGGCTTTCTGATGAAGGTGCTCAAGATGTAGAGCTTGTGCTGGAGATGATTCCTTCTATTGAAGTGGATATTAAATGTGAGACTGAAGGCGAAGAGGGGATTCAAGAGGGTGATGTTGTGACCATGTATGCTTGGGTCTCACTTCACCGTCGCAATGGCCTAACTGCTGCTCTTCCCCATGCTCCTTCCTTCCCGTTCCACAAGGAAGAGAACTTCTGGTTGCTTCTAGCAGATGCTGCATCGAATGAAGTTTGGTTATCCCAGAAGGTCAGCTTCATGGATGAGACTACCGCTATAACTGCAGCATCAAAAGCTATACAAGAGACCCAAGAAGCACTAGGTGCAAGTGCAAAGGAAATAGGGATTGCGATTAGAGAGGCAGTCGACAGGGTGAAGAAAGGCAGTAGGTTGGTAATGGGCAAGTTCCAAGCCCCGGCCGAGGGCACTCACAACCTGACTTCCTTCTGTTTGTGCGACGCATGGATAGGATGTGACACCAAGACCAGCTTGAAGTTGAAGGTCCTGAAGCGCAGCCGG-GCAGGAACAAGAGGTCATGTGGCTGAAGAAGGCCCAGTGGCAGAGGATGGTATTGAGGAAGAAGAAGAGGAGGAAGAAGAGGAGTACGACGACTACGAGAGCGAGTACAGCGATGACGAGGAGGATGAGAAGAGCAAAGGAAAGGGTAAGGTCGCGAACGGAGTAGCCCACCAAAAGGCAAACTCCGATATAGATTCTGGCAGTGATGATTGATATAGTACCTTGAGTTGTCCAACCATAGACACTTAACATCGTTGTTTTTGCCCTTTGTGCACCCTGTTGAAACTTGAACATATCAGTTGTCAACTTATAGAGCAATCGGCGATAGCTACCAAAGTTACCATTTTTGTTTAATATTGTTGTGTTGGATGAATGA] [+] EMBL AK070019 [CTCGCCTCGCCTCGCCGCGCCGCCGCGCCGCCCCAGATCCGCCCCGCCTCCGGCCATCCCCGCCGCCAGATCCGGTGGGGGAAGCCCCCTCTCTCCGCTCTCGCCCAAGGGGGGGTTGGTTTATCCGGTAGGAGGAGGAGTAGTGAGGTGGTGGTAGTGGTTTAAGCGGCCATGGCGGCGGCGGAGGAGAACAGCTCGCTGTTCCTCATATTCATCCTCACCATGATCGCGCTCCCCCTCGTGCCCTACACCATCATGCGCCTCTGCCGCGCCGCCAACGTCAAGGCCAAGACCATCCACTGCCGCTGCTCCGGCTGCCACCGCTCCGGCAAGTACCGCAAGTCGATCTACAAGAGGATATCCAACTTCTCGACATGCAGTAACCTCACCATCCTGCTTCTCTGGATAGTTATGATCTTCCTTGTATACTACATCAAGCATGTTAGCCGCGAGGTACAAGTGTTTGAGCCGTATAGCATTCTTGGACTGGAACCAGGTGCATCAGAGTCTGATATCAAGAAATCATACCGTAGACTTTCTATCCAATACCATCCTGATAAAAATCCTGATCCTGAGGCCCACAAGTACTTTGTTGAATTTATATCCAAGGCATATCAGGCTTTAACTGATCCTGTATCTCGTGAAAACTATGAGAAGTATGGTCACCCAGATGGACGCCAGGGGATGCAAATGGGCATTGCTTTGCCCAAGTTCTTGTTGAATATGGATGGTGCATCTGGTGGAATAATGCTTCTTGGAATAGTAGGGCTATGCATACTCTTGCCCTTGATGATAGCAGTTATTTATTTGTCAAGGTCATCAAAGTACACCGGAAATTATGTCATGCATCAAACTCTGTCCACTTATTACTACTTCATGAAGCCTTCACTGGCTCCAAGCAAAGTCATGGATGTCTTCATTAAGGCTGCAGAGTATATGGAGATGCCAGTCCGGCGCAGTGACGATGAACCCTTGCAGAAATTATTTGTAGCTGTTAGGAGTGAATTAAATCTAGACTTGAAGAATATTAGAACAGAACAAGCTAAATTCTGGAAGCAGCATCCATCTCTAGTGAAGATGGAGCTTTTGATTCAGGCTCACCTCACTGGAGAGTCATTTGCTTTGACACCAGCGTTACTGAAGGATTACAGGCACATGCTTGAACTTGCACCTCGTCTTCTGGATGAACTTGTCAAGATTGCACTACTACCAAGGAGTCCCCATGGTTTTGGATGGCTCAGGCCTGCAATCGGTGTAATTGAGCTTTCCCAAAATATCATCCAGGCTGTCCCTCTCAGTGCACGAAAAGCTAGCGGAGGCAACTCTGAAGGAATAGCACCTTTCTTGCAGCTACCGCATTTTACTGAAACGGTTGTCAAAAAAATTGCTCGCAAGAAAATCCGTTCATTCCAAGAATTCTGTGACATGCCTGTGGAGGAACGCGCCACGTTGCTGACACAGGTTGCTGGGCTTTCTGATGAAGGTGCTCAAGATGTAGAGCTTGTGCTGGAGATGATTCCTTCTATTGAAGTGGATATTAAATGTGAGACTGAAGGCGAAGAGGGGATTCAAGAGGGTGATGTTGTGACCATGTATGCTTGGGTCTCACTTCACCGTCGCAATGGCCTAACTGCTGCTCTTCCCCATGCTCCTTCCTTCCCGTTCCACAAGGAAGAGAACTTCTGGTTGCTTCTAGCAGATGCTGCATCGAATGAAGTTTGGTTATCCCAGAAGGTCAGCTTCATGGATGAGACTACCGCTATAACTGCAGCATCAAAAGCTATACAAGAGACCCAAGAAGCACTAGGTGCAAGTGCAAAGGAAATAGGGATTGCGATTAGAGAGGCAGTCGACAGGGTGAAGAAAGGCAGTAGGTTGGTAATGGGCGAGTTCCAAGCCCCGGCCGAGGGCACTCACAACCTGACTTCCTTCTGTTTGTGCGACGCATGGATAGGATGTGACACCAAGACCAGCTTGAAGTTGAAGGTCCTGAAGCGCAGCCGG GCAGGAACAAGAGGTCATGTGGCTGAAGAAGGCCCAGTGGCAGAGGATGGTATTGAGGAAGAAGAAGAGGAGGAAGAAGAGGAGTACGACGACTACGAGAGCGAGTACAGCGATGACGAGGAGGATGAGAAGAGCAAAGGAAAGGGTAAGGTCGCGAACGGAGTAGCCCACCAAAAGGCAAACTCCGATATAGATTCTGGCAGTGATGATTGATATAGTACCTTGAGTTGTCCAACCATAGACACTTAACATCGTTGTTTTTGCCCTTTGTGCACCCTGTTGAAACTTGAACATATCAGTTGTCAACTTATAGAGCAATCGGCGATAGCTACCAAAGTTACCATTTTTGTTTAATATTGTTGTGTTGGATGAATGA] [+] EMBL CB630333 [ AGGTGGCGGTAGTGGTTTAAGCGGCCATGGCGGCGGCGGAGGAGAACAGCTCACTGTTCCTCATATTCATCCTCACCATGATCGCTCTCCCCCTCGTGCCCTACACCATCATGCGCCTCTGCCGCGCCGCCAACGTCAAGGCCAAGACCATTCACTGCCGCTGCTCCGGCTGCCACCGCTCCGGCAAGTACCGCAAGTCGATCTACAAGAGGATATCCAACTTCTCGACATGCAGTAACCTCACCATCCTGCTTCTCTGGATAGTTATGATCTTCCTTGTATACTACATCAAGCATGTTAGCCGCGAGGTACAAGTGTTTGAGCCGTATAGCATTCTTGGACTGGAACCAGGTGCATCAGAGTCTGATATCAAGAAATCATACCGTAGACTTTCTATCCAATACCATCCTGATAAAAATCCTGATCCTGAGGCCCACAAGTACTTTGTTGAATTTATATCCAAGGCATATCAGGCTTTAACTGATCCTGTATCTCGTGAAAACTATGAGAAGTATGGTCACCCAGATGGACGCCAGGGGATGCAAATGGGCATTGCTTTGCCCAAGTTCTTGTTGAATATGGATGGTGCATCTGGTGGAATAATGCTTCTTGGAATAGTAGGGCTATGCATACTCTTGCCCTTGATGATAGCAGTTATTTATTTGTCAAGGTCATCAAAGTACACCGGAAATTATGTCATGCATCAAACTCTGTCCACTTATTACTACTTCATGAAGCCTTCACTGGCTCCAAGCAAAGTCATG ] [+] EMBL CB637406 [ CCATGGCGGCGGCGGAGGAGAACAGCTCGCTGTTCCTCATATTCATCCTCACCATGATCGCGCTCCCCCTCGTGCCCTACACCATCATGCGCCTCTGCCGCGCCGCCAACGTCAAGGCCAAGACCATCCACTGCCGCTGCTCCGGCTGCCACCGCTCCGGCAAGTACCGCAAGTCGATCTACAAGAGGATATCCAACTTCTCGACATGCAGTAACCTCACCATCCTGCTTCTCTGGATAGTTATGATCTTCCTTGTATACTACATCAAGCATGTTAGCCGCGAGGTACAAGTGTTTGAGCCGTATAGCATTCTTGGACTGGAACCAGGTGCATCAGAGTCTGATATCAAGAAATCATACCGTAGACTTTCTATCCAATACCATCCTGATAAAAATCCTGATCCTGAGGCCCACAAGTACTTTGTTGAATTTATATCCAAGGCATATCAGGCTTTAACTGATCCTGTATCTCGTGAAAACTATGAGAAGTATGGTCACCCAGATGGACGCCAGGGGATGCAAATGGGCATTGCTTTGCCCAAGTTCTTGTTGAATATGGATGGTGCATCTGGTGGAATAAT ] [+] EMBL C28896 [ TCTCTGGATAGTNATGATCTTCCTTGTATACTACATCAAGCATGTTAGCCGCGAGGTACAAGTGTTTGAGCCGTATAGCATTCTTGGACTGGAACCAGGTGCATCANAGTCTGATATCAAGAAATCATACCGTAGACTTTNTATCCAATACCATCCTGATAAAANTCCTGATCCTGAGGCCCACAAGTACTTTTTTGANTTTNTATCCAAGGCATATCAGGCTTTAACTGATCCTGTATCTCGTGAAAACTATGAGANGTATGGTCACCCng ] [+] EMBL CB000734 [ AGAGTCATTTGCTTTGACACCAGCGTTACTGAAGGATTACAGGCACATGCTTGAACTTGCACCTCGTCTTCTGGATGAACTTGTCAAGATTGCACTACTACCAAGGAGTCCCCATGGTTTTGGATGGCTCAGGCCTGCAATCGGTGTAATTGAGCTTTCCCAAAATATCATCCAGGCTGTCCCTCTCAGTGCACGAAAAGCTAGCGGAGGCAACTCTGAAGGAATAGCACCTTTCTTGCAGCTACCGCATTTTACTGAAACGGTTGTCAAAAAAATTGCTCGCAAGAAAATCCGTTCATTCCAAGAATTCTGTGACATGCCTGTGGAGGAACGCGCCACGTTGCTGACACAGGTTGCTGGGCTTTCTGATGAAGGTGCTCAAGATGTAGAGCTTGTGCTGGAGATGATTCCTTCTATTGAAGTGGATATTA ] [+] EMBL CF304684 [ TGTAATTGAGCTTTCCCAAAATATCATCCAGGCTGTCCCTCTCAGTGCACGAAAAGCTAGCGGAGGCAACTCTGAAGGAATAGCACCTTTCTTGCAGCTACCGCATTTTACTGAAACGGTTGTCAAAAAAATTGCTCGCAAGAAAATCCGTTCATTCCAAGAATTCTGTGACATGCCTGTGGAGGAACGCGCCACGTTGCTGACACAGGTTGCTGGGCTTTCTGATGAAGGTGCTCAAGATGTAGAGCTTGTGCTGGAGATGATTCCTTCTATTGAAGTGGATATTAAATGTGAGACTGAAGGCGAAGAGGGGATTCAAGAGGGTGATGTTGTGACCATGTA ] [+] EMBL AK059187 [ CTGTGGAGGAACGCGCCACGTTGCTGACACAGGTTGCTGGGCTTTCTGATGAAGGTGCTCAAGATGTAGAGCTTGTGCTGGAGATGATTCCTTCTATTGAAGTGGATATTAAATGTGAGACTGAAGGCGAAGAGGGGATTCAAGAGGGTGATGTTGTGACCATGTATGCTTGGGTCTCACTTCACCGTCGCAATGGCCTAACTGCTGCTCTTCCCCATGCTCCTTCCTTCCCGTTCCACAAGGAAGAGAACTTCTGGTTGCTTCTAGCAGATGCTGCATCGAATGAAGTTTGGTTATCCCAGAAGGTCAGCTTCATGGATGAGACTACCGCTATAACTGCAGCATCAAAAGCTATACAAGAGACCCAAGAAGCACTAGGTGCAAGTGCAAAGGAAATAGGGATTGCGATTAGAGAGGCAGTCGACAGGGTGAAGAAAGGCAGTAGGTTGGTAATGGGCAAGTTCCAAGCCCCGGCCGAGGGCACTCACAACCTGACTTCCTTCTGTTTGTGCGACGCATGGATAGGATGTGACACCAAGACCAGCTTGAAGTTGAAGGTCCTGAAGCGCAGCCGG GCAGGAACAAGAGGTCATGTGGCTGAAGAAGGCCCAGTGGCAGAGGATGGTATTGAGGAAGAAGAAGAGGAGGAAGAAGAGGAGTACGACGACTACGAGAGCGAGTACAGCGATGACGAGGAGGATGAGAAGAGCAAAGGAAAGGGTAAGGTCGCGAACGGAGTAGCCCACCAAAAGGCAAACTCCGATATAGATTCTGGCAGTGATGATTGATATAGTACCTTGAGTTGTCCAACCATAGACACTTAACATCGTTGTTTTTGCCCTTTGTGCACCCTGTTGAAACTTGAACATATCAGTTGTCAACTTATAGAGCAATCGGCGATAGC ] [-] EMBL CB630334 [ AAGAGGGTGATGTTGTGACCATGTATGCTTGGGTCTCACTTCACCGTCGCAATGGCCTAACTGCTGCTCTTCCCCATGCTCCTTCCTTCCCGTTCCACAAGGAAGAGAACTTCTGGTTGCTTCTAGCAGATGCTGCATCGAATGAAGTTTGGTTATCCCAGAAGGTCAGCTTCATGGATGAGACTACCGCTATAACTGCAGCATCAAAAGCTATACAAGAGACCCAAGAAGCACTAGGTGCAAGTGCAAAGGAAATAGGGATTGCGGTTAGAGAGGCAGTCGACAGGGTGAAGAAAGGCAGTAGGTTGGTAATGGGCAAGTTCCAAGCCCCGGCCGAGGGCACTCACAACCTGACTTCCTTCTGTTTGTGCGACGCATGGATAGGATGTGACACCAAGACCAGCTTGAAGTTGAAGGTCCTGAAGCGCAGCCGG GCAGGAACAAGAGGTCATGTGGCTGAAGAAGGCCCAGTGGCAGAGGATGGTATTGAGGAAGAAGAAGAGGAGGAAGAAGAGGAGTACGATGACTACGAGAGCGAGTACAGCGATGACGAGGAGGATGAGAAGAGCAAAGGAAAGGGTAAGGTCGCGAACGGAGTAGCCCACCAAAAGGCAAACTCCGATATAGATTCTGGCAGTGATGATTGATATAGTACCTTGAGTTGTCCAACCATAGACACTTAACATCGTTGTTTTTGCCCTTTGTGCACCCTGTTGAAACTTGAACATATCAGTTGTCAACTTATAGAGCAATCGGCGATAGCT ] [+] EMBL AU071236 [ TATAACTGCAGCATCAAAAGCTATACAAGAGACCCAAGAAGCACTAGGTGCAAGTGCAAAGGAAATAGGGATTGCGATTAGAGAGGCAGTCGACAGGGTGAAGAAAGGCAGTAGGTTGGTAATGGGCAAGTTCCAAGCCCCGGCCGAGGGCACTCACAACCTGACTTCCTTCTGTTTGTGCGACGCATGGATAGGATGTGACACCAAGACCAGCTTGAAGTTGAAGGTCCTGAAGCGCA CCGGNGCAGGAACAAGAGGTCATGTGGCTGAAGAAGGCCCAGTGGCAGAGGATGGTATTGAGGAAGAAGAAGAGGAGGAAGAAGAGGAGTACGACGACTACGAGAGCGAGTACAGCGATGACGAGGAGGATGAGAAaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||