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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11434#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2538 fasta sequence
[CGCTTTCCTCTCCTTGCCACCACCACCTCTCCTCCTATTGTAGCCACCAACTCCGCCGCCTCCGCCTCCGCCTCCGCCCCTCCACCGCCGCCTCCGGCCGGCCGTCAGGTTCTTCGATCGCCCGCCTTTCCATACCCATTCCTTCTGTATTTCATTCTTGATTTTGGGGGGAAGATGGGATAAACAATTGGTTATCCAGTAGATAACTTCGTTGATCGATTGACGTCGATTTTTATTTTTATTGCTAATGGAGAAGAAGCTAGGTGATATTAACTTGTTTGTTTCTAGCAACATGAGGGTACAAGATCTCTTTCAGTTTTGACACAACCAAATGAGCATCCAAAGTAACACTACTGTACTTAGTATCGCGATGTTCTTCAAAATGCTGTGTTAATGAAAATGAAATAGTGTGCTGACAGTTGATTCATGCAGAACTTGACAGTGGTAGAGAACTTTATTCCCATCCAACGTTCGGGGGAAGCCGTAGCCGTGTGTCGCGTTCATCTTTCATGGAAAAATCCCAAAGAAAGCGAGGACCAGATCATCTGCTGATTCTTGTCCATGGTATCATTGCAAGCCCCAGTGACTGGACCTATGGAGAAGCAGTGCTAAAGAAGAGGTTAGGTGACAATTTTTTCATCTATGCTAGTTCGTCAAATATCTACACCAAAACTTTCGATGGGATTGATGTTGCTGGAAGAAGGTTAGCAAATGAAGTATTGGATGTGATTCAGAAGATGGCTGGATTGAGAAAGATTTCCTTCCTAGCACATTCTTTGGGTGGTTTGTTTGCGCGATATGCTATTTCTATCCTTTATTCAACAGCAATGAAGGATGCAAGTCAAAGTGCTGCTTGTATAGCTCCTACAACTGGAGGGTCTGAAAAGTTGGAGTGCACTTCAGGATTAGGTGCAATTGCTGGGCTGGAACCAATTAATTTTATTACCTTAGCAACCCCACACCTTGGTGTTAGAGGGAAAAATCAGGTGGGTCTCTAAATCTATTAAATTATCTGATACATTTTTATTCCCCTCAAAATTAGTTCTGCTGGAAGCAAAAACTACTATATTGGACTTTGAGTTGCCTAGTAAGATTTTAGTATAAAACTATTGTTGCATAGCTAATCGGAGGCCAAAGACCAGTAACCAAGTACTACTTCTGAATATGTTGTGACTTGTGATCAATGTATTAATTACATGCATTTTCTGCAATAATATTACCAGCTTCCATTTCTTCAAGGGCTATCTATTCTAGAAAAGATTGCTGCACCTTTGGCTCCCTTGGTTGTTGGCCGCACTGGTGCCCAATTCTTTCTCACGGATGGTGAACCTAGCAAGCCACCTCTTCTGCTAGAGATGGCATCTGATCATGAGGATAAAAAATTTATGTAAGTCATAAGAAAGGTCTTAAGGCTAACTTATTATAGTAGAACATATCTTCTTCGTTCAAACATTGTAGTAGAACATATTGTTTCTTCAATGTTCCTCAGATCTGCACTAGCAGCTTTCAAGAACCGCATTTTGTACGCTAATGTTTCGTACGACCGTATCCTTCCTTACTCCTAGTTAGTACAACATGATTTCCTCTGCCTGATATGCAAACGAATTTTTTTTTGCTCCAAACCATTTTCTATTTTGCTGCTCTTGTTTTCTTGAACATATGCCAGATATGGTCGGATGGCGAACATCTTCAATAAGAAGAGAAAAAGACCTTACAAAGGTGTTCAGTGATCTCCACTAGAATTTGATTAGAAACCAAATTGCAGCACTGTGTGAATACTTCAGTAATTTTTTTCCTCCTCCATATGCAGCCCTCACATCGTTCACTGGATGGCTACAAGCACATTGTGAATATGGAATATTGTTCGCCTATATCATCTGATGGCCCTCATTTCCCTCTGCAAGCTGCCAGAGCCAAAGAAGCTGCACAGAGTAGACCAAACAAAGAAAACACTGAAGAATATCACGAAATGATGGAAGAGGAGATGATCCATGGCTTGCAGAGGGTCGGTTGGAAGAAAGTAGATGTCAACTT-CCATACAGCACTATGGCCTTACTTTGCTCATAACAACATACATGTTAAGAATGAGTGGCTTCACAATGCCGGTGCCGGCGTCATCGCCCATGTGGCGGACAGCATAAAACAGCAGGAGTCACGGAAATATTTCCGTGCCAACTTATAAGATCTTCAGTCCCCTGTGCTGCATGGTCAGAAGTATAATAACTATGGTTTCCTAAATAACCAAAGCAAAGGTTTTGCCTCTCTAGTAGGAGTGTAGGACTTGTCTCAGTAGTAAGCAGTGTCCCAAAAAAAAAAACTCAACCTAAGGATAATCCAGATTCGTTGTTCTAGGAGGGGTCACA-TCCCCTTCTATGTTGAG--TTTTTTTTTTTTGGGACGGATGGAGTATGTTCGATGTGTTTAGTGTGGATATAGAAAACTAGCTAGTTACTGTATTTTTGTCCACAAAAGCTTTTTTTTTTCTTTCGCACAGACGTACAGTTGAAAATAAATTAGTGAAACATTATTATTAAAAAAAA]
[+] EMBL AK067799 [CGCTTTCCTCTCCTTGCCACCACCACCTCTCCTCCTATTGTAGCCACCAACTCCGCCGCCTCCGCCTCCGCCTCCGCCCCTCCACCGCCGCCTCCGGCCGGCCGTCAGGTTCTTCGATCGCCCGCCTTTCCATACCCATTCCTTCTGTATTTCATTCTTGATTTTGGGGGGAAGATGGGATAAACAATTGGTTATCCAGTAGATAACTTCGTTGATCGATTGACGTCGATTTTTATTTTTATTGCTAATGGAGAAGAAGCTAGGTGATATTAACTTGTTTGTTTCTAGCAACATGAGGGTACAAGATCTCTTTCAGTTTTGACACAACCAAATGAGCATCCAAAGTAACACTACTGTACTTAGTATCGCGATGTTCTTCAAAATGCTGTGTTAATGAAAATGAAATAGTGTGCTGACAGTTGATTCATGCAGAACTTGACAGTGGTAGAGAACTTTATTCCCATCCAACGTTCGGGGGAAGCCGTAGCCGTGTGTCGCGTTCATCTTTCATGGAAAAATCCCAAAGAAAGCGAGGACCAGATCATCTGCTGATTCTTGTCCATGGTATCATTGCAAGCCCCAGTGACTGGACCTATGGAGAAGCAGTGCTAAAGAAGAGGTTAGGTGACAATTTTTTCATCTATGCTAGTTCGTCAAATATCTACACCAAAACTTTCGATGGGATTGATGTTGCTGGAAGAAGGTTAGCAAATGAAGTATTGGATGTGATTCAGAAGATGGCTGGATTGAGAAAGATTTCCTTCCTAGCACATTCTTTGGGTGGTTTGTTTGCGCGATATGCTATTTCTATCCTTTATTCAACAGCAATGAAGGATGCAAGTCAAAGTGCTGCTTGTATAGCTCCTACAACTGGAGGGTCTGAAAAGTTGGAGTGCACTTCAGGATTAGGTGCAATTGCTGGGCTGGAACCAATTAATTTTATTACCTTAGCAACCCCACACCTTGGTGTTAGAGGGAAAAATCAGGTGGGTCTCTAAATCTATTAAATTATCTGATACATTTTTATTCCCCTCAAAATTAGTTCTGCTGGAAGCAAAAACTACTATATTGGACTTTGAGTTGCCTAGTAAGATTTTAGTATAAAACTATTGTTGCATAGCTAATCGGAGGCCAAAGACCAGTAACCAAGTACTACTTCTGAATATGTTGTGACTTGTGATCAATGTATTAATTACATGCATTTTCTGCAATAATATTACCAGCTTCCATTTCTTCAAGGGCTATCTATTCTAGAAAAGATTGCTGCACCTTTGGCTCCCTTGGTTGTTGGCCGCACTGGTGCCCAATTCTTTCTCACGGATGGTGAACCTAGCAAGCCACCTCTTCTGCTAGAGATGGCATCTGATCATGAGGATAAAAAATTTATGTAAGTCATAAGAAAGGTCTTAAGGCTAACTTATTATAGTAGAACATATCTTCTTCGTTCAAACATTGTAGTAGAACATATTGTTTCTTCAATGTTCCTCAGATCTGCACTAGCAGCTTTCAAGAACCGCATTTTGTACGCTAATGTTTCGTACGACCGTATCCTTCCTTACTCCTAGTTAGTACAACATGATTTCCTCTGCCTGATATGCAAACGAATTTTTTTTTGCTCCAAACCATTTTCTATTTTGCTGCTCTTGTTTTCTTGAACATATGCCAGATATGGTCGGATGGCGAACATCTTCAATAAGAAGAGAAAAAGACCTTACAAAGGTGTTCAGTGATCTCCACTAGAATTTGATTAGAAACCAAATTGCAGCACTGTGTGAATACTTCAGTAATTTTTTTCCTCCTCCATATGCAGCCCTCACATCGTTCACTGGATGGCTACAAGCACATTGTGAATATGGAATATTGTTCGCCTATATCATCTGATGGCCCTCATTTCCCTCTGCAAGCTGCCAGAGCCAAAGAAGCTGCACAGAGTAGACCAAACAAAGAAAACACTGAAGAATATCACGAAATGATGGAAGAGGAGATGATCCATGGCTTGCAGAGGGTCGGTTGGAAGAAAGTAGATGTCAACTT CCATACAGCACTATGGCCTTACTTTGCTCATAACAACATACATGTTAAGAATGAGTGGCTTCACAATGCCGGTGCCGGCGTCATCGCCCATGTGGCGGACAGCATAAAACAGCAGGAGTCACGGAAATATTTCCGTGCCAACTTATAAGATCTTCAGTCCCCTGTGCTGCATGGTCAGAAGTATAATAACTATGGTTTCCTAAATAACCAAAGCAAAGGTTTTGCCTCTCTAGTAGGAGTGTAGGACTTGTCTCAGTAGTAAGCAGTGTCCCAAAAAAAAAAACTCAACCTAAGGATAATCCAGATTCGTTGTTCTAGGAGGGGTCACA TCCCCTTCTATGTTGAG TTTTTTTTTTTTGGGACGGATGGAGTATGTTCGATGTGTTTAGTGTGGATATAGAAAACTAGCTAGTTACTGTATTTTTGTCCACAAAAGCTTTTTTTTTTCTTTCGCACAGACGTACAGTTGAAAATAAATTAGTGAAA ]
[-] EMBL CF276367 [ AAGAGGAGATGATCCATGGCTTGCAGAGGGTCGGTTGGAAGAAAGTAGATGTCAACTTCCCATACAGCACTATGGCCTTACTTTGCTCATAACAACATACATGTTAAGAATGAGTGGCTTCACAATGCCGGTGCCGGCGTCATCGCCCATGTGGCGGACAGCATAAAACAGCAGGAGTCACGGAAATATTTCCGTGCCAACTTATAAGATCTTCAGTCCCCTGTGCTGCATGGTCAGAAGTATAATAACTATGGTTTCCTAAATAACCAAAGCAAAGGTTTTGCCTCTCTAGTAGGAGTGTAGGACTTGTCTCAGTAGTAAGCAGTGTCCC AAAAAAAAAACTCAACCTAAGGATAATCCAGATTCGTTGTTCTAGGAGGGGTCACATTCCCCTTCTATGTTGAGTTTTTTTTTTTTTTGGGACGGATGGAGTATGTTCGATGTGTTTAGTGTGGATATAGAAAACTAGCTAGTTACTGTATTTTTGTCCACAAAAGCTTTTTTTTTTCTTTCGCACAGACGTACAGTTGAAAATAAATTAGTGAAACATTATTATTAAAAAAAA]
consensusID : consensus_11434#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 810 fasta sequence
[ATGGCGAACATCTTCAATAAGAAGAGAAAAAGACCTTACAAAGCCCTCACATCGTTCACTGGATGGCTACAAGCACATTGTGAATATGGAATATTGTTCGCCTATATCATGTGATGGCCCTCATTTCCCTCTGCAAGCTGCCAGAGCCAAAGAAGCTGCACAGAGTAGACCAAACAAAGAAAACACTGAAGAATATCTCGAAATGATGGAAGAGGAGATGATCCATGGCTTGCAGAGGGTCGGTTGGAAGAAAGTAGATGTCATCTTCCATACAGCACTATGGCCTTACTTTGCTCATAACAACATACATGTTAAGAATGAGTGGCTTCACAATGCCGGTGCCGGCGTCATCGCCCATGTGGCGGACAGCATAAAACAGCAGGAGTCACGGAAATATTTCCGTGCCAACTTATAAGATCTTCAGTCCCCTGTGCTGCATGGTCAGAAGTATAATAACTATGGTTTCCTAAATAACCAAAGCAAAGGTTTTGCCTCTCTAGTAGGAGTGTAGGACTTGTCTCAGTAGTAAGCAGTGTCCC-AAAAAAAAAAACTCAACCTAAGGATAATCCAGA-TTCGTTGTTCTA-GGAGGGGTCACATCCCCTTCTATGTTGAG--TTTTTTTTTTTTGGGACGGATGGAGTATGTTCGATGTGTTTAGTGTGGATATAGAAAACTAGCTAGTTACTGTATTTTTGTCCACAAAAGCTTTTTTTTTTCTTTCGCACAGACGTACAGTTGAAAATAAATTAGTGAAACATTATTATTATTTTTATTAAAAAGTTAGGTTGCAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CB673108 [ATGGCGAACATCTTCAATAAGAAGAGAAAAAGACCTTACAAAGCCCTCACATCGTTCACTGGATGGCTACAAGCACATTGTGAATATGGAATATTGTTCGCCTATATCATGTGATGGCCCTCATTTCCCTCTGCAAGCTGCCAGAGCCAAAGAAGCTGCACAGAGTAGACCAAACAAAGAAAACACTGAAGAATATCTCGAAATGATGGAAGAGGAGATGATCCATGGCTTGCAGAGGGTCGGTTGGAAGAAAGTAGATGTCATCTTCCATACAGCACTATGGCCTTACTTTGCTCATATCAACATACATGTTAAGAATGAGTGGCTTCACAATGCCGGTGCCGGCGTCATCGCCCATGTGGCGGACAGCATAAAACAGCAGGAGTCACGGAAATATTTCCGTGCCAACTTATAAGATCTTCAGTCCCCTGTGCTGCATGGTCAGAAGTATAATAACTATGGTTTCCTAAATAACCAAAGCAAAGGTTTTGCCTCTCTAGTAGGAGTGTAGGACTTGTCTCAGTAGTAAGCAGTGTCCCAAAAAAAAAAAACTCAACCTAAGGATAATCCAGA TTCGTTGTTCTA GGAGGGGTCACATCCCCTTCTATGTTGAG TTTTTTTTTTTTGGGACGGATGGAGTATGTTCGATGTGTTTAGTGTGGATATAGAAAACTAGCTAGTTACTGTATTTTTGTCCACAAAAGCTTTTTTTTTTCTTTCGCACAGACGTACAGTTGAAAATAAATTAGTGAAAGATTATTATT ]
[+] EMBL AU075977 [ AGTAGATGTCAACTTCCATACAGCACTNTGGCCTTACTTTGCNCATAACAACATACATNTTAAGAATGAGTGGCTTCANAATGCCGGTNCCGGCGTCATCGCCCATNTGGCGGACAGCNTAAAACAGCAGGAGTCCCGGAAATATTNCCGTGCCAACTTNTAAGATCTTCAGNCCCCTGTGCTGCATGGTCAGAAGTATAATAACTATGGTTTCCTAAATANCCAAAGCAAAGGTTTTGCCTCTCTAGTAGGAGTGTAGGACTTGTCTCAGTAGTAAGCAGTGTCCC AAAAAAAAAAACTCAACCTAAGGATAATCCAGA TTCGTTGTTCTA GGAGGGGTCACATCCCCTTCTATGTTGAGTTTTTTTTTTTTTTGGGACGGATGGAGTATGTTCGATGTGTTTAGTGTGGATATAGAAAACTAGCTAGTTACTGTATTTTTGTCCACAAAAGC TTTTTTTTTCTTTCGCACAGACGTACAGTTGAAAATAAATTAGTGAAACATTATTATTATTTTTATTATTTAGTTAGGTTGCAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF336627 [ TCCATACAGCACTATGGCCTTACTTTGCTCATAACAACATACATGTTAAGAATGAGTGGCTTCACAATGCCGGTGCCGGCGTCATCGCCCATGTGGCGGACAGCATAAAACAGCAGGAGTCACGG AATATTTCCGTGCCAACTTATAAGATCTTCAGTCCCCTGTGCTGCATGGTCAGAAGTATAATAACTATGGTTTCCTAAATAACCAAAGCAAAGGTTTTGCCTCTCTAGTAGGAGTGTAGGACTTGTCTCAGTAGTAAGCAGTGTCCC AAAAAAAAAAACTCAACCTAAGGATAATCCAGATTTCGTTG TCTAGGGAGGGGTCACATCCCCTTCTATGTTGAG TTTTTTTTTTTGGGACGGATGGAGTACGTTCGATGTGTTTAGTGTGGATATAGAAAACTAGCTAGTTACTGTATTTTTGTCCACAAAAGCTTTTTTTTTTCTTTCGCACAGACGTACAGTTGAAAATAAATTAGTGAAACATTATTATTATTTTTATTAAAA ]
[-] EMBL CF336628 [ AAAAAAACTCAACCTAAGGATAATCCAGA TTCGTTGTTCTA GGAGGGGTCACATCCCCTTCTATGTTGAG TTTTTTTTTTTGGGACGGATGGAGTACGTTCGATGTGTTTAGTGTGGATATAGAAAACTAGCTAGTTACTGTATTTTTGTCCACAAAAGCTTTTTTTTTTCTTTCGCACAGACGTACAGTTGAAAATAAATTAGTGAAACATTATTATTATTTTTATTAAAAA ]
consensusID : consensus_11434#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 535 fasta sequence
[TGCAATTGCTGGGCTGGAACCAATTAATTTTATTACCTTAGCAACCCCACACCTTGGTGTTAGAGGGAAAAATCAGCTTCCATTTCTTCAAGGGCTATCTATTCTAGAAAAGATTGCTGCACCTTTGGCTCCCTTGGTTGTTGGCCGCACTGGTGCCCAACTCTTTCTCACGGATGGTGAACCTAGCAAGCCACCTCTTCTGCTAGAGATGGCATCTGATCATGAGGATAAAAAATTTATGTAAGTCATAAGAAAGGTCTTAAGGCTAACTTATTATAGTAGAACATATCTTCTTCGTTCAAACATTGTAGTAGAACATATTGTTTCTTCAATGTTCCTCAGATCTGCACTAGCAGCTTTCAAGAACCGCATTTTGTACGCTAATGTTTCGTACGACCGTATCCTTCCTTACTCCTAGTTAGTACCACATGATTTCCTCTGCCTGATATGCAAACGAATTTTTTTTTGCTCCAAACCATTTTCTATTTTGCTGCTCTTGTTTTCTTGAACATATGCCAGATATGGTCGGATGGCG]
[+] EMBL CF303362 [TGCAATTGCTGGGCTGGAACCAATTAATTTTATTACCTTAGCAACCCCACACCTTGGTGTTAGAGGGAAAAATCAGCTTCCATTTCTTCAAGGGCTATCTATTCTAGAAAAGATTGCTGCACCTTTGGCTCCCTTGGTTGTTGGCCGCACTGGTGCCCAACTCTTTCTCACGGATGGTGAACCTAGCAAGCCACCTCTTCTGCTAGAGATGGCATCTGATCATGAGGATAAAAAATTTATGTAAGTCATAAGAAAGGTCTTAAGGCTAACTTATTATAGTAGAACATATCTTCTTCGTTCAAACATTGTAGTAGAACATATTGTTTCTTCAATGTTCCTCAGATCTGCACTAGCAGCTTTCAAGAACCGCATTTTGTACGCTAATGTTTCGTACGACCGTATCCTTCCTTACTCCTAGTTAGTACCACATGATTTCCTCTGCCTGATATGCAAACGAATTTTTTTTTGCTCCAAACCATTTTCTATTTTGCTGCTCTTGTTTTCTTGAACATATGCCAGATATGGTCGGATGGCG]
consensusID : consensus_11434#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 523 fasta sequence
[TTATAGCCACCAACTCCGCCGCCTCCGCCTCCGCCTCCGCCCCTCCACCGCCGCCTCCGGCCGGCCGTCAGAACTTGACAGTGGTAGAGAACTTTATTCCCATCCAACGTTCGGGGGAAGCCGTAGCCGTGTGTCGCGTTCATCTTTCATGGAAAAATCCCAAGGAAAGCGAGGACCAGATCATCTGCTGATTCTTGTCCATGGTATCATTGCAAGCCCCAGTGACTGGACCTATGGAGAAGCAGTGCTAAAGAAGAGGTTAGGTGACAATTTTTTCATCTATGGTAGCTAGTTCGTCAAATATCTACATCAAAACTTTCGATGGGATTGATGTTGCTGGAAGAAGGTATTGGATGTGATTCAGAAGATGGCTGGATTGAGAAAGATTTCCTTCCTAGCACATTCTTTGGGTGGGTTTGTTTGCGCGATATGCTATTTCTATCCTTTATTCAACAGCAATGAAGGATGCAAGTCAAAGTGCTGCTTGTATAGCTCCTACAACTGGAGGGTCTGAAAAGTTGGA]
[+] EMBL CF276366 [TTATAGCCACCAACTCCGCCGCCTCCGCCTCCGCCTCCGCCCCTCCACCGCCGCCTCCGGCCGGCCGTCAGAACTTGACAGTGGTAGAGAACTTTATTCCCATCCAACGTTCGGGGGAAGCCGTAGCCGTGTGTCGCGTTCATCTTTCATGGAAAAATCCCAAGGAAAGCGAGGACCAGATCATCTGCTGATTCTTGTCCATGGTATCATTGCAAGCCCCAGTGACTGGACCTATGGAGAAGCAGTGCTAAAGAAGAGGTTAGGTGACAATTTTTTCATCTATGGTAGCTAGTTCGTCAAATATCTACATCAAAACTTTCGATGGGATTGATGTTGCTGGAAGAAGGTATTGGATGTGATTCAGAAGATGGCTGGATTGAGAAAGATTTCCTTCCTAGCACATTCTTTGGGTGGGTTTGTTTGCGCGATATGCTATTTCTATCCTTTATTCAACAGCAATGAAGGATGCAAGTCAAAGTGCTGCTTGTATAGCTCCTACAACTGGAGGGTCTGAAAAGTTGGA]
consensusID : consensus_11434#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 374 fasta sequence
[CCGCGGCCGGCCGTCAGAACTTGACAGTGGTAGAGAACTTTATTCCCATCCAACGTTCGGGGGAAGCCGTAGCCGTGTGTCGCGTTCATCTTTCATGGAAAAATCCCAAAGAAAGCGAGGACCAGATCATCTGCTGATTCTTGTCCATGGTATCATTGCAAGCCCCAGTGACTGGACCTATGGAGAAGCAGTGCTAAAGAAGAGGTTAGGTGACAATTTTTTCATCTATGGTAGCTAGTTCGTCAAATATCTACACCAAAACTTTCGATGGGATTGATGTTGCTGGAAGAAGGGTTAGCAAATGAAGTATTGGATGTGATTCAGAAGATGGCTGGATTGAGAAAGATTTCCTTCCTAGCACATTCTTTGGGTGG]
[+] EMBL OSC100221 [CCGCGGCCGGCCGTCAGAACTTGACAGTGGTAGAGAACTTTATTCCCATCCAACGTTCGGGGGAAGCCGTAGCCGTGTGTCGCGTTCATCTTTCATGGAAAAATCCCAAAGAAAGCGAGGACCAGATCATCTGCTGATTCTTGTCCATGGTATCATTGCAAGCCCCAGTGACTGGACCTATGGAGAAGCAGTGCTAAAGAAGAGGTTAGGTGACAATTTTTTCATCTATGGTAGCTAGTTCGTCAAATATCTACACCAAAACTTTCGATGGGATTGATGTTGCTGGAAGAAGGGTTAGCAAATGAAGTATTGGATGTGATTCAGAAGATGGCTGGATTGAGAAAGATTTCCTTCCTAGCACATTCTTTGGGTGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11434#0 CGCTTTCCTCTCCTTGCCACCACCACCTCTCCTCCTATTGTAGCCACCAACTCCGCCGCC 60
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 TCCGCCTCCGCCTCCGCCCCTCCACCGCCGCCTCCGGCCGGCCGTCAGGTTCTTCGATCG 120
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 CCCGCCTTTCCATACCCATTCCTTCTGTATTTCATTCTTGATTTTGGGGGGAAGATGGGA 180
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 TAAACAATTGGTTATCCAGTAGATAACTTCGTTGATCGATTGACGTCGATTTTTATTTTT 240
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 ATTGCTAATGGAGAAGAAGCTAGGTGATATTAACTTGTTTGTTTCTAGCAACATGAGGGT 300
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 ACAAGATCTCTTTCAGTTTTGACACAACCAAATGAGCATCCAAAGTAACACTACTGTACT 360
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 TAGTATCGCGATGTTCTTCAAAATGCTGTGTTAATGAAAATGAAATAGTGTGCTGACAGT 420
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 TGATTCATGCAGAACTTGACAGTGGTAGAGAACTTTATTCCCATCCAACGTTCGGGGGAA 480
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 GCCGTAGCCGTGTGTCGCGTTCATCTTTCATGGAAAAATCCCAAAGAAAGCGAGGACCAG 540
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 ATCATCTGCTGATTCTTGTCCATGGTATCATTGCAAGCCCCAGTGACTGGACCTATGGAG 600
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 AAGCAGTGCTAAAGAAGAGGTTAGGTGACAATTTTTTCATCTATGCTAGTTCGTCAAATA 660
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 TCTACACCAAAACTTTCGATGGGATTGATGTTGCTGGAAGAAGGTTAGCAAATGAAGTAT 720
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 TGGATGTGATTCAGAAGATGGCTGGATTGAGAAAGATTTCCTTCCTAGCACATTCTTTGG 780
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 GTGGTTTGTTTGCGCGATATGCTATTTCTATCCTTTATTCAACAGCAATGAAGGATGCAA 840
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 GTCAAAGTGCTGCTTGTATAGCTCCTACAACTGGAGGGTCTGAAAAGTTGGAGTGCACTT 900
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 CAGGATTAGGTGCAATTGCTGGGCTGGAACCAATTAATTTTATTACCTTAGCAACCCCAC 960
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 ACCTTGGTGTTAGAGGGAAAAATCAGGTGGGTCTCTAAATCTATTAAATTATCTGATACA 1020
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 TTTTTATTCCCCTCAAAATTAGTTCTGCTGGAAGCAAAAACTACTATATTGGACTTTGAG 1080
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 TTGCCTAGTAAGATTTTAGTATAAAACTATTGTTGCATAGCTAATCGGAGGCCAAAGACC 1140
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 AGTAACCAAGTACTACTTCTGAATATGTTGTGACTTGTGATCAATGTATTAATTACATGC 1200
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 ATTTTCTGCAATAATATTACCAGCTTCCATTTCTTCAAGGGCTATCTATTCTAGAAAAGA 1260
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 TTGCTGCACCTTTGGCTCCCTTGGTTGTTGGCCGCACTGGTGCCCAATTCTTTCTCACGG 1320
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 ATGGTGAACCTAGCAAGCCACCTCTTCTGCTAGAGATGGCATCTGATCATGAGGATAAAA 1380
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 AATTTATGTAAGTCATAAGAAAGGTCTTAAGGCTAACTTATTATAGTAGAACATATCTTC 1440
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 TTCGTTCAAACATTGTAGTAGAACATATTGTTTCTTCAATGTTCCTCAGATCTGCACTAG 1500
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 CAGCTTTCAAGAACCGCATTTTGTACGCTAATGTTTCGTACGACCGTATCCTTCCTTACT 1560
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 CCTAGTTAGTACAACATGATTTCCTCTGCCTGATATGCAAACGAATTTTTTTTTGCTCCA 1620
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 AACCATTTTCTATTTTGCTGCTCTTGTTTTCTTGAACATATGCCAGATATGGTCGGATGG 1680
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 CGAACATCTTCAATAAGAAGAGAAAAAGACCTTACAAAGGTGTTCAGTGATCTCCACTAG 1740
consensus_11434#1 ------------------------------------------------------------
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 AATTTGATTAGAAACCAAATTGCAGCACTGTGTGAATACTTCAGTAATTTTTTTCCTCCT 1800
consensus_11434#1 --------------------------ATGGCGAACAT-CTTCAATAAGAAGAGAAAAAGA 33
consensus_11434#3 ------------------------TTATAGCCACCAA--CTCCGCCGCCTCCGCCTCCGC 34
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 -------------------------TGCAATTGCTGGGCTGGAACCAATTAATTTTATTA 35
consensus_11434#0 CCATATGCAGCCCTCACATCGTT--CACTGGATGGCTACAAGCACATTGTGAATATGGAA 1858
consensus_11434#1 CCTTACAAAGCCCTCACATCGTT--CACTGGATGGCTACAAGCACATTGTGAATATGGAA 91
consensus_11434#3 CTCCGCCCCTCCACCGCCGCCTC--CGGCCGGCCGTCAGAACTTGACAGTGG-TAGAGAA 91
consensus_11434#4 --------------------CCG--CGGCCGGCCGTCAGAACTTGACAGTGG-TAGAGAA 37
consensus_11434#2 CCTTAGCAACCCCACACCTTGGTGTTAGAGGGAAAAATCAGCTTCCATTTCTTCAAGGGC 95
* * * * *
consensus_11434#0 TATTGTTCGCCTATATCATCTGATGGCCCTCATTTCCCTCTGCAAGCTGCCAGAGCCAAA 1918
consensus_11434#1 TATTGTTCGCCTATATCATGTGATGGCCCTCATTTCCCTCTGCAAGCTGCCAGAGCCAAA 151
consensus_11434#3 CTTTATTCCCATCCAACGTTCGGGGGAAGCCGTAGCCGTGTGTCGCGTTCATCTTTCATG 151
consensus_11434#4 CTTTATTCCCATCCAACGTTCGGGGGAAGCCGTAGCCGTGTGTCGCGTTCATCTTTCATG 97
consensus_11434#2 TATCTATTCTAGAAAAGATTGCTGCACCTTTGGCTCCCTTGGTTGTTGGCCGCACTGGTG 155
* * * * ** * * *
consensus_11434#0 GA-AGCTGCACAGAGTAGACCAAA--CAAAGAAAACACTGAAGAATATC--ACGAAATGA 1973
consensus_11434#1 GA-AGCTGCACAGAGTAGACCAAA--CAAAGAAAACACTGAAGAATATC--TCGAAATGA 206
consensus_11434#3 GA-AAAATCCCAAGGAAAGCGAGGACCAGATCATCTGCTGATTCTTGTCCATGGTATCAT 210
consensus_11434#4 GA-AAAATCCCAAAGAAAGCGAGGACCAGATCATCTGCTGATTCTTGTCCATGGTATCAT 156
consensus_11434#2 CCCAACTCTTTCTCACGGATGGTGAACCTAGCAA--GCCACCTCTTCTGCTAGAGATGGC 213
* * * * * * * *
consensus_11434#0 TGGAAGAGGAGATGATCCATGGCTTGCAGAGGGTCGGTT----GGAAGAAAGTAGATGTC 2029
consensus_11434#1 TGGAAGAGGAGATGATCCATGGCTTGCAGAGGGTCGGTT----GGAAGAAAGTAGATGTC 262
consensus_11434#3 TGCAAGCCCCAGTGACT--GGACCTATGGAGAAGCAGTGCTAAAGAAGAGGTTAGGTGAC 268
consensus_11434#4 TGCAAGCCCCAGTGACT--GGACCTATGGAGAAGCAGTGCTAAAGAAGAGGTTAGGTGAC 214
consensus_11434#2 ATCTGATCATGAGGATAAAAAATTTATGTA-----AGTCATAAGAAAGGTCTTAAGGCTA 268
** * * ** *** **
consensus_11434#0 AACTTCCATACAGCACTATGGCCTTACTTTGCTCATAACAACATACATGTTAAGAAT--- 2086
consensus_11434#1 ATCTTCCATACAGCACTATGGCCTTACTTTGCTCATAACAACATACATGTTAAGAAT--- 319
consensus_11434#3 AATTTTTTCAT----CTATGG---TAGCTAGTTCGTCA-AATATCTACATCAAAACTTTC 320
consensus_11434#4 AATTTTTTCAT----CTATGG---TAGCTAGTTCGTCA-AATATCTACACCAAAACTTTC 266
consensus_11434#2 ACTTATTATAG-----TAGAACA-TATCTTCTTCGTTCAAACAT-TGTAGTAGAACATAT 321
* * * ** ** * ** * ** ** * *
consensus_11434#0 GAGTGGCTTCACAATGCCGGTGCCGGCGTCATCGCC-----CATGTGGCGGACAGCATAA 2141
consensus_11434#1 GAGTGGCTTCACAATGCCGGTGCCGGCGTCATCGCC-----CATGTGGCGGACAGCATAA 374
consensus_11434#3 GATGGGATTGATGTTGCTGGAAGAAGG--------------TATTGGATGTGATTCAGAA 366
consensus_11434#4 GATGGGATTGATGTTGCTGGAAGAAGGGTTAGCAAATGAAGTATTGGATGTGATTCAGAA 326
consensus_11434#2 TGTTTCTTCAATGTTCCTCAGATCTGCACTAGCAGCTTT--CAAGAACCGCATTTTGTAC 379
* * * * * * * *
consensus_11434#0 AACAGCAGGAGTCACGGAAATATTTCCGTGCCAACTTATAAGATCTTCAGTCCCCTGTGC 2201
consensus_11434#1 AACAGCAGGAGTCACGGAAATATTTCCGTGCCAACTTATAAGATCTTCAGTCCCCTGTGC 434
consensus_11434#3 GATGGCTGGATTGA--GAAAGATTTCCTTCCTAGCACAT----TCTTTGGG----TGGGT 416
consensus_11434#4 GATGGCTGGATTGA--GAAAGATTTCCTTCCTAGCACAT----TCTTTGGG----TGG-- 374
consensus_11434#2 GCTAAT--GTTTCGTACGACCGTATCCTTCCTTACTCCTA---GTTAGTACCACATGATT 434
* * * * *** * * * * * **
consensus_11434#0 TGCATGGTCAGAAGTATAATAACTATGGTTTCCTAAATAACCAAAGCAAAGGTTTTGCCT 2261
consensus_11434#1 TGCATGGTCAGAAGTATAATAACTATGGTTTCCTAAATAACCAAAGCAAAGGTTTTGCCT 494
consensus_11434#3 TTGTTTGCGCGATATGCTATTTCTATCCTTTATTCAACAGC-AATGAAGGATGCAAGTCA 475
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 TCCTCTGCCTGATATGCAA--ACGAATTTTTTTTTGCT--CCAAACCATTTTCTATTTTG 490
consensus_11434#0 CTCTAGTAGGAGTGTAGGACTTGTCTCAGTAGTAAGCAGTGTCCCAAAAAAAAAAACTCA 2321
consensus_11434#1 CTCTAGTAGGAGTGTAGGACTTGTCTCAGTAGTAAGCAGTGTCCCAAAAAAAAAAACTCA 554
consensus_11434#3 AAGTGCTGCTTGTATAGCTCCTACAACTGGAGGGTCTGAAAAGTTGGA------------ 523
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 CTGCTCTTGTTTTCTTGAACATATGCCAGATATGGTCGGATGGCG--------------- 535
consensus_11434#0 ACCTAAGGATAATCCAGATTCGTTGTTCTAGGAGGGGTCACATCCCCTTCTATGTTGAGT 2381
consensus_11434#1 ACCTAAGGATAATCCAGATTCGTTGTTCTAGGAGGGGTCACATCCCCTTCTATGTTGAGT 614
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 TTTTTTTTTTTGGGACGGATGGAGTATGTTCGATGTGTTTAGTGTGGATATAGAAAACTA 2441
consensus_11434#1 TTTTTTTTTTTGGGACGGATGGAGTATGTTCGATGTGTTTAGTGTGGATATAGAAAACTA 674
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 GCTAGTTACTGTATTTTTGTCCACAAAAGCTTTTTTTTTTCTTTCGCACAGACGTACAGT 2501
consensus_11434#1 GCTAGTTACTGTATTTTTGTCCACAAAAGCTTTTTTTTTTCTTTCGCACAGACGTACAGT 734
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 TGAAAATAAATTAGTGAAACATTATTATTA-----AAAAAAA------------------ 2538
consensus_11434#1 TGAAAATAAATTAGTGAAACATTATTATTATTTTTATTAAAAAGTTAGGTTGCAAAAAAA 794
consensus_11434#3 ------------------------------------------------------------
consensus_11434#4 ------------------------------------------------------------
consensus_11434#2 ------------------------------------------------------------
consensus_11434#0 ----------------
consensus_11434#1 AAAAAAAAAAAAAAAA 810
consensus_11434#3 ----------------
consensus_11434#4 ----------------
consensus_11434#2 ----------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||