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Oryza sativa
cluster # 11435 cluster # 11435       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11435#0 length = 1154 sequences # 6  
consensus_11435#1 length = 679 sequences # 2  
consensus_11435#2 length = 631 sequences # 1  

consensusID : consensus_11435#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1154
fasta sequence
                              [GAGTAGAAAATTCCTCATTTTCCCTTTTCTTCCTTCCTTCCCCTCTTTGGCTTCTCTCCTGGCCTCTCCTCTCCTCTCCTCTCGTCGTTGCACCCACCTCCTCTCCCAAGATCTCACCTTTCCACCCCCTCCGCCCCCGCCTCGATCCGGCAATGGCTTCCCCCGGACCGGCCACCGCCGGCGAGCTCCTCCGCATCGACCCCGTCGAACTCCGCTTCCCCTTCGAGTTGAAGAAGCAGATCTCGTGCTCGATGCAGCTATCGAATCTCAGCGACGACTACATCGCCTTCAAGGTGAAAACTACAAGCCCAAAGAAGTATTCGGTGCGGCCTAACACAGGGGTTGTCTTGCCACGGTCTACCTGCGATGTTGTTGTGACAATGCAAGCACAGCGG-GAAGCCCCGCCTGACATGCAGTGCAAAGATAAGTTCCTAGTCCAGAGCGTCATTGCACC-TTCCGGTGTAAC-TGTGAAGGATATCAC-GGGAGAAATGTTTACGAAGGAGTCCGG-AAATAAGGTTGAAGAGGTAAAATTGCGAGTGACCTATATTGCTCCTCCACAGCCACCATCTCCTGTTCCCGAGG-AATCAGAAGAAGGTTCCCCATCAAGGGTTTCTGAGTCAGAAAATGGAGACAGTCTTGGTGGGGGTTTCACTAGAGCACTGAGAGAACGCATTGAGCCTCAAGAAAATTCATTAGAGGCTGGAGCTTTGATTAACAAATTGAATGAAGAGAAGAACTCTGCAATTCAACAGAACCATAAAATTAGACAGGAACTGGATATGATGAGACGGGAGATAAGCAAGAAGCGCGGAGGGTTCTCCTTCATAATCGTCATAATTG-TCGCCTTGATCGGGATCTTCTTGGGCTATATGATGAAGTCATAATTCTTTGAGTCGACATCGAAGGGAACTGGACCCCACATTCATGCCAAGTTATTCTTGGGAGGCAAAGAGACCGTCATGAAGTTCTCCTTT-CTGTTTTGTCAATATAGGAGTGTTGCGTACGTGGGAAAATCTTCAACCAGATTAAGCTTGTTTTCTTTTGCAGTTTGTTGTTTGTTGTATTGGGTGAGTTGTGCACTTCTGACACTGTAACTTGGAAATGCATTAATCGCTTCTGTTGACAGAAAAAAAAAAAAAAAACACAAAAAAAAA]

[+] EMBL CF295468             [GAGTAGAAAATTCCTCATTTTCCCTTTTCTTCCTTCCTTCCCCTCTTTGGCTTCTCTCCTGGCCTCTCCTCTCCTCTCCTCTCGTCGTTGCACCCACCTCCTCTCCCAAGATCTCACCTTTCCACCCCCTCCGCCCCCGCCTCGATCCGGCAATGGCTTCCCCCGGACCGGCCACCGCCGGCGAGCTCCTCCGCATCGACCCCGTCGAACTCCGCTTCCCCTTCGAGTTGAAGAAGCAGATCTCGTGCTCGATGCAGCTATCGAATCTCAGCGACGACTACATCGCCTTCAAGGTGAAAACTACAAGCCCAAAGAAGTATTCGGTGCGGCCTAACACAGGGGTTGTCTTGCCACGGTCTACCTGCGATGTTGTTGTGACAATGCAAGCACAGCGG GAAGCCCCGCCTGACATGCAGGGCAAAGATAAGTTCCTAGTCCAGAGCGTCATTGCACCTTTCCGGTGTAAC TGGGAAGGATATCAC GGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK070710             [                 TTTTCCCTTTTCTTCCTTCCTTCCCCTCTTTGGCTTCTCTCCTGGCCTCTCCTCTCCTCTCCTCTCGTCGTTGCACCCACCTCCTCTCCCAAGATCTCACCTTTCCACCCCCTCCGCCCCCGCCTCGATCCGGCAATGGCTTCCCCCGGACCGGCCACCGCCGGCGAGCTCCTCCGCATCGACCCCGTCGAACTCCGCTTCCCCTTCGAGTTGAAGAAGCAGATCTCGTGCTCGATGCAGCTATCGAATCTCAGCGACGACTACATCGCCTTCAAGGTGAAAACTACAAGCCCAAAGAAGTATTCGGTGCGGCCTAACACAGGGGTTGTCTTGCCACGGTCTACCTGCGATGTTGTTGTGACAATGCAAGCACAGCGG GAAGCCCCGCCTGACATGCAGTGCAAAGATAAGTTCCTAGTCCAGAGCGTCATTGCACC TTCCGGTGTAAC TGTGAAGGATATCAC GGGAGAAATGTTTACGAAGGAGTCCGG AAATAAGGTTGAAGAGGTAAAATTGCGAGTGACCTATATTGCTCCTCCACAGCCACCATCTCCTGTTCCCGAGG AATCAGAAGAAGGTTCCCCATCAAGGGTTTCTGAGTCAGAAAATGGAGACAGTCTTGGTGGGGGTTTCACTAGAGCACTGAGAGAACGCATTGAGCCTCAAGAAAATTCATTAGAGGCTGGAGCTTTGATTAACAAATTGAATGAAGAGAAGAACTCTGCAATTCAACAGAACCATAAAATTAGACAGGAACTGGATATGATGAGACGGGAGATAAGCAAGAAGCGCGGAGGGTTCTCCTTCATAATCGTCATAATTG TCGCCTTGATCGGGATCTTCTTGGGCTATATGATGAAGTCATAATTCTTTGAGTCGACATCGAAGGGAACTGGACCCCACATTCATGCCAAGTTATTCTTGGGAGGCAAAGAGACCGTCATGAAGTTCTCCTTT CTGTTTTGTCAATATAGGAGTGTTGCGTACGTGGGAAAATCTTCAACCAGATTAAGCTTGTTTTCTTTTGCAGTTTGTTGTTTGTTGTATTGGGTGAGTTGTGCACTTCTGACACTGTAACTTGGAAATGCATTAATCGCTTCTGTTGACAGtt                          ]
[+] EMBL AF074750             [                                                                                                  TCCTCTCCCAAGATCTCACCTTTCCACCCCCTCCGCCCCCGCCTCGATCCGGCAATGGCTTCCCCCGGACCGGCCACCGCCGGCGAGCTCCTCCGCATCGACCCCGTCGAACTCCGCTTCCCCTTCGAGTTGAAGAAGCAGATCTCGTGCTCGATGCAGCTATCGAATCTCAGCGACGACTACATCGCCTTCAAGGTGAAAACTACAAGCCCAAAGAAGTATTCGGTGCGGCCTAACACAGGGGTTGTCTTGCCACGGTCTACCTGCGATGTTGTTGTGACAATGCAAGCACAGCGG GAAGCCCCGCCTGACATGCAGTGCAAAGATAAGTTCCTAGTCCAGAGCGTCATTGCACC TTCCGGTGTAAC TGTGAAGGATATCACGGGGAGAAATGTTTACGAAGGAGTCCGGAAAATAAGGTTGAAGAGGTAAAATTGCGAGTGACCTATATTGCTCCTCCACAGCCACCATCTCCTGTTCCCGAGGAAATCAGAAGAAGGTTCCCCATCAAGGGTTTCTGAGTCAGAAAATGGAGACAGTCTTGGTGGGGGTTTCACTAGAGCACTGAGAGAACGCATTGAGCCTCAAGAAAATTCATTAGAAGCTGGAGCTTTGATTAACAAATTGAATGAAGANAA AAATCTGCAATTCAACAGAACCATAAAATTANACAGGAA TGGATATGATGAGACGGGAGATAA CCAGAAACGCGGAAGG TCTCCTTCATAATCGTCATAATTGTTCG CTTGATCGGGATCTTCTTGGGCTATATGATGAATTC TAA TCTTTGANTC AAATCNAAGGGAA TGGAACCC CNTTCCTGCCNA TT TTCTTGGGAGGCAAA A AACG CCTGAA NTCTCCTT                                                                                                                                                                                      ]
[+] EMBL C25989               [                                                                                                       TCCCAAGATCTCACCTTTCCACCCCCTCCGCCCCCGCCTCGATCCGGCAATGGCTTCCCCCGGACCGGCCACCGCCGNCGAGCTCCTCCGCATCGACCCCGTCGAACTCCGCTTCCCCTTCGAGTTGAAGAAGCAGATCTCGTGCTCGATGCAGCTATCGAATCTCAGCGACGACTACATCGCCTTCAAGGTGAAAACTACAAGCCCAAAGAAGTATTCGGTGCGGCCTAACACAGGGGTTGTCTTGCCACGGTCTACCTGCGATGTTGTTGTGACAATGCAAGCACAGCGGNGAAGCCCCGNCTGACATGCAGTGCAAAGATAAGTTCCTAGTCCAGAGCGTCATTGCACC TTCCGGTGTAACTTGTGAAGGATATCAC GGGAGAAATGTTTACGAGGGAGTCCGG AAATAAGGTTG AGAGGTAAAt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CF295469             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AATCAGAAGAAGGTTCCCCATCAAGGGTTTCTGAGTCAGAAAATGGAGACAGTCTTGGTGGGGGTTTCACTAGAGCACTGAGAGAACGCATTGAGCCTCAAGAAAATTCATTAGAGGCTGGAGCTTTGATTAACAAATTGAATGAAGAGAAGAACTCTGCAATTCAACAGAACCATAAAATTAGACAGGAACTGGATATGATGAGACGGGAGATAAGCAAGAAGCGCGGAGGGTTCTCCTTCATAATCGTCATAATTG TCGCCTTGATCGGGATCTTCTTGGGCTATATGATGAAGTCATAATTCTTTGAGTCGACATCGAAGGGAACTGGACCCCACATTCATGCCAAGTTATTCTTGGGAGGCAAAGAGACAGTCATGAAGTTCTCCTTTAAAATATTGTCAATATAGGAGTGTTGCGTACGTGGGAAAATCTTCAACCAGATTAAGCTTGTTTTCTTTTGCAGTTTGTTGTTTGTTGTATTGGGTGAGTTGTGCACTTCTGACACTGTAACTTGGAAATGGATTAATCGCTTCTGTTGACA AAAAAAAAAAAAAAAACAC         ]
[+] EMBL CF330995             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTTTTCTTTTGCAGTTTGTTGTTTGTTGTATTGGGTGAGTTGTGCACTTCTGACACTGTAACTTGGAAATGCATTAATCGCTTCTGTTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_11435#0 GAGTAGAAAATTCCTCATTTTCCCTTTTCTTCCTTCCTTCCCCTCTTTGGCTTCTCTCCT GGCCTCTCCTCTCCTCTCCTCTCGTCGTTGCACCCACCTCCTCTCCCAAGATCTCACCTT TCCACCCCCTCCGCCCCCGCCTCGATCCGGCAATGGCTTCCCCCGGACCGGCCACCGCCG GCGAGCTCCTCCGCATCGACCCCGTCGAACTCCGCTTCCCCTTCGAGTTGAAGAAGCAGA TCTCGTGCTCGATGCAGCTATCGAATCTCAGCGACGACTACATCGCCTTCAAGGTGAAAA CTACAAGCCCAAAGAAGTATTCGGTGCGGCCTAACACAGGGGTTGTCTTGCCACGGTCTA CCTGCGATGTTGTTGTGACAATGCAAGCACAGCGGGAAGCCCCGCCTGACATGCAGTGCA AAGATAAGTTCCTAGTCCAGAGCGTCATTGCACCTTCCGGTGTAACTGTGAAGGATATCA CGGGAGAAATGTTTACGAAGGAGTCCGGAAATAAGGTTGAAGAGGTAAAATTGCGAGTGA CCTATATTGCTCCTCCACAGCCACCATCTCCTGTTCCCGAGGAATCAGAAGAAGGTTCCC CATCAAGGGTTTCTGAGTCAGAAAATGGAGACAGTCTTGGTGGGGGTTTCACTAGAGCAC TGAGAGAACGCATTGAGCCTCAAGAAAATTCATTAGAGGCTGGAGCTTTGATTAACAAAT TGAATGAAGAGAAGAACTCTGCAATTCAACAGAACCATAAAATTAGACAGGAACTGGATA TGATGAGACGGGAGATAAGCAAGAAGCGCGGAGGGTTCTCCTTCATAATCGTCATAATTG TCGCCTTGATCGGGATCTTCTTGGGCTATATGATGAAGTCATAATTCTTTGAGTCGACAT CGAAGGGAACTGGACCCCACATTCATGCCAAGTTATTCTTGGGAGGCAAAGAGACCGTCA TGAAGTTCTCCTTTCTGTTTTGTCAATATAGGAGTGTTGCGTACGTGGGAAAATCTTCAA CCAGATTAAGCTTGTTTTCTTTTGCAGTTTGTTGTTTGTTGTATTGGGTGAGTTGTGCAC TTCTGACACTGTAACTTGGAAATGCATTAATCGCTTCTGTTGACAGAAAAAAAAAAAAAA AACACAAAAAAAAA



consensusID : consensus_11435#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 679
fasta sequence
                              [AGACAAGGGGGGATATNCGGGAGAAATGTTTACGAAGGAGTCCGGAAATAAGGTTGAAGAGGTAAAATTGCGAGTGACCTATATTGCTCCTCCACAGCCACCATCTCCTGTTCCCGAGGAATCAGAAGAAGGTTCCCCATCAAGGGTTTCTGAGTCAGAAAATGGAGACAGTCTTGGTGGGGGTTTCACTAGAGCACTGAGAGAACGCATTGAGCCTCAAGAAAATTCATTAGAGGCTGGAGCTTTGATTAACAAATTGAATGAAGAGAAGAACTCTGCAATTCAACAGAACCATAAAATTAGACAGGAACTGGATATGATGAGACGGGAGATAAGCAAGAAGCGCGGAGGGTTCTCCTTCATAATCGTCATAATTGTCGCCTTGATCGGGATCTTCTTGGGCTATATGATGAAGTCATAATTCTTTGAGTCGACATCGAAGGGAACTGGACCCCACATTCATGCCAAGTTATTCTTGGGAGGCAAAGAGACCGTCATGAAGTTCTCCTTTCTGTTTTGTCAATATAGGAGTGTTACGTACGTGGGAAAATCTTCAACCAGATTAAGCTTGTTTTCTTTTGCAGTTTGTTGNTTGNTGNATTGGGTGAGNTGGGCACTTCTGACACTGTAACTTGGAAATGCATTAATCGCTTCTGNTGACAGGTCATCTTGCCAAAAA]

[+] EMBL CA767247             [AGACAAGGGGGGATATNCGGGAGAAATGTTTACGAAGGAGTCCGGAAATAAGGTTGAAGAGGTAAAATTGCGAGTGACCTATATTGCTCCTCCACAGCCACCATCTCCTGTTCCCGAGGAATCAGAAGAAGGTTCCCCATCAAGGGTTTCTGAGTCAGAAAATGGAGACAGTCTTGGTGGGGGTTTCACTAGAGCACTGAGAGAACGCATTGAGCCTCAAGAAAATTCATTAGAGGCTGGAGCTTTGATTAACAAATTGAATGAAGAGAAGAACTCTGCAATTCAACAGAACCATAAAATTAGACAGGAACTGGATATGATGAGACGGGAGATAAGCAAGAAGCGCGGAGGGTTCTCCTTCATAATCGTCATAATTGTCGCCTTGATCGGGATCTTCTTGGGCTATATGATGAAGTCATAATTCTTTGAGTCGACATCGAAGGGAACTGGACCCCACATTCATGCCAAGTTATTCTTGGGAGGCAAAGAGACCGTCATGAAGTTCTCCTTTCTGTTTTGTCAATATAGGAGTGTTACGTACGTGGGAAAATCTTCAACCAGATTAAGCTTGTTTTCTTTTGCAGTTTGTTGNTTGNTGNATTGGGTGAGNTGGGCACTTCTGACACTGTAACTTGGAAATGCATTAATCGCTTCTGNTGACAGGTC             ]
[+] EMBL AU092222             [                                                                                                                                               GGGTTTCTGAGCCAGAAAATGGAGACAGNCTTGGTGGGGGTTTCACTAGAGCACTGAGAGAACGCATTGNGCCTCAAGANAATTCATTAGAGNCTGGAGCTTTGATTNACAAATTGAATGAAGAGAAGAACTCTGCAATTCAACAGAACCATAAAATTAGACAGGAACTGGATATGATGAGACGGGAGATAAGCAAGAAGCGCGGAGGGTTCTCCTTCATAATCGTCATAATTGTCGCCTTGATCGGGATCTTCTTGGGCTATATGATGAAGTCATAATTCTTTGAGTCGACATCGAAGGGAACTGGACCCCACATTCATGCCAAGTTATTCTTGGGAGGCAAAGAGACCGTCATGAAGTTCTCCTTTCTGTTTTGTCAATATAGGAGTGTTGCGTACGTGGGAAAATCTTCAACCAGATTAAGCTTGTTTTCTTTTGCAGTTTGTTGTTTGTTGTATTGGGTGAGTTGTGCACTTCTGACACTGTNACTTGGAAATGCATTAATCGCTTCTGTTGACAGTTTATCTTGCCAAAAA]


>consensus_11435#1 AGACAAGGGGGGATATNCGGGAGAAATGTTTACGAAGGAGTCCGGAAATAAGGTTGAAGA GGTAAAATTGCGAGTGACCTATATTGCTCCTCCACAGCCACCATCTCCTGTTCCCGAGGA ATCAGAAGAAGGTTCCCCATCAAGGGTTTCTGAGTCAGAAAATGGAGACAGTCTTGGTGG GGGTTTCACTAGAGCACTGAGAGAACGCATTGAGCCTCAAGAAAATTCATTAGAGGCTGG AGCTTTGATTAACAAATTGAATGAAGAGAAGAACTCTGCAATTCAACAGAACCATAAAAT TAGACAGGAACTGGATATGATGAGACGGGAGATAAGCAAGAAGCGCGGAGGGTTCTCCTT CATAATCGTCATAATTGTCGCCTTGATCGGGATCTTCTTGGGCTATATGATGAAGTCATA ATTCTTTGAGTCGACATCGAAGGGAACTGGACCCCACATTCATGCCAAGTTATTCTTGGG AGGCAAAGAGACCGTCATGAAGTTCTCCTTTCTGTTTTGTCAATATAGGAGTGTTACGTA CGTGGGAAAATCTTCAACCAGATTAAGCTTGTTTTCTTTTGCAGTTTGTTGNTTGNTGNA TTGGGTGAGNTGGGCACTTCTGACACTGTAACTTGGAAATGCATTAATCGCTTCTGNTGA CAGGTCATCTTGCCAAAAA



consensusID : consensus_11435#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 631
fasta sequence
                              [ACTGCAGTGCAAAGATAAGTTCCTAGTCCAGANCGTCATTGCNCCTTCCGGTGTAACTGTNAAAAGATATCACGGGANAAAATGTTTACCAAAAGAATCCGGGAANTAAGGTTGAAANAAGTAAAATTGCGANTGACCTATATTGCTCCTCCNCAGCCACCATCTCCTGTTCCCGAAGAATCAGAAGAAGTTCCCCATCAAGGGTTTCTGAATCAGAAAATGGAAACAGTCTTGGTGGGGGTTTCACTANANCACTGAAAAAAACNCATGAGCCTCCAGAAAAATTCNTTAAAANGCTGGAGCTTTGATTAACAAATTGAATGAAANANAAAAACTCTGCCAATTCCACCAGAACCATAAAATTANAANNGGAACTGGATATGATGAAAACGGGAANATAANCCAANAAACCCCGGAAGGGTTCCCTTCCATAATCNTCATAATTGTTCCCCTTGAATCGGGATCTTCNTGGGGCTATTTAATNAAATTCNTAAATCCTTTGAATTCAACNTCCAAAGGGAACTGGAACCCCCCTTTCCTTGCCCAATTTTTTCTTTGGGAAGNCAAAGAAAAACCGNCCNGAAATTCCNCCNNNCCTGGTTTTGGTCAATAATTANGAAATNTTTGGCTT]

[+] EMBL BE228428             [ACTGCAGTGCAAAGATAAGTTCCTAGTCCAGANCGTCATTGCNCCTTCCGGTGTAACTGTNAAAAGATATCACGGGANAAAATGTTTACCAAAAGAATCCGGGAANTAAGGTTGAAANAAGTAAAATTGCGANTGACCTATATTGCTCCTCCNCAGCCACCATCTCCTGTTCCCGAAGAATCAGAAGAAGTTCCCCATCAAGGGTTTCTGAATCAGAAAATGGAAACAGTCTTGGTGGGGGTTTCACTANANCACTGAAAAAAACNCATGAGCCTCCAGAAAAATTCNTTAAAANGCTGGAGCTTTGATTAACAAATTGAATGAAANANAAAAACTCTGCCAATTCCACCAGAACCATAAAATTANAANNGGAACTGGATATGATGAAAACGGGAANATAANCCAANAAACCCCGGAAGGGTTCCCTTCCATAATCNTCATAATTGTTCCCCTTGAATCGGGATCTTCNTGGGGCTATTTAATNAAATTCNTAAATCCTTTGAATTCAACNTCCAAAGGGAACTGGAACCCCCCTTTCCTTGCCCAATTTTTTCTTTGGGAAGNCAAAGAAAAACCGNCCNGAAATTCCNCCNNNCCTGGTTTTGGTCAATAATTANGAAATNTTTGGCTT]


>consensus_11435#2 ACTGCAGTGCAAAGATAAGTTCCTAGTCCAGANCGTCATTGCNCCTTCCGGTGTAACTGT NAAAAGATATCACGGGANAAAATGTTTACCAAAAGAATCCGGGAANTAAGGTTGAAANAA GTAAAATTGCGANTGACCTATATTGCTCCTCCNCAGCCACCATCTCCTGTTCCCGAAGAA TCAGAAGAAGTTCCCCATCAAGGGTTTCTGAATCAGAAAATGGAAACAGTCTTGGTGGGG GTTTCACTANANCACTGAAAAAAACNCATGAGCCTCCAGAAAAATTCNTTAAAANGCTGG AGCTTTGATTAACAAATTGAATGAAANANAAAAACTCTGCCAATTCCACCAGAACCATAA AATTANAANNGGAACTGGATATGATGAAAACGGGAANATAANCCAANAAACCCCGGAAGG GTTCCCTTCCATAATCNTCATAATTGTTCCCCTTGAATCGGGATCTTCNTGGGGCTATTT AATNAAATTCNTAAATCCTTTGAATTCAACNTCCAAAGGGAACTGGAACCCCCCTTTCCT TGCCCAATTTTTTCTTTGGGAAGNCAAAGAAAAACCGNCCNGAAATTCCNCCNNNCCTGG TTTTGGTCAATAATTANGAAATNTTTGGCTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11435#0      GAGTAGAAAATTCCTCATTTTCCCTTTTCTTCCTTCCTTCCCCTCTTTGGCTTCTCTCCT 60
consensus_11435#1      ------------------------------------------------------------
consensus_11435#2      ------------------------------------------------------------
                                                                                   

consensus_11435#0      GGCCTCTCCTCTCCTCTCCTCTCGTCGTTGCACCCACCTCCTCTCCCAAGATCTCACCTT 120
consensus_11435#1      ------------------------------------------------------------
consensus_11435#2      ------------------------------------------------------------
                                                                                   

consensus_11435#0      TCCACCCCCTCCGCCCCCGCCTCGATCCGGCAATGGCTTCCCCCGGACCGGCCACCGCCG 180
consensus_11435#1      ------------------------------------------------------------
consensus_11435#2      ------------------------------------------------------------
                                                                                   

consensus_11435#0      GCGAGCTCCTCCGCATCGACCCCGTCGAACTCCGCTTCCCCTTCGAGTTGAAGAAGCAGA 240
consensus_11435#1      ------------------------------------------------------------
consensus_11435#2      ------------------------------------------------------------
                                                                                   

consensus_11435#0      TCTCGTGCTCGATGCAGCTATCGAATCTCAGCGACGACTACATCGCCTTCAAGGTGAAAA 300
consensus_11435#1      ------------------------------------------------------------
consensus_11435#2      ------------------------------------------------------------
                                                                                   

consensus_11435#0      CTACAAGCCCAAAGAAGTATTCGGTGCGGCCTAACACAGGGGTTGTCTTGCCACGGTCTA 360
consensus_11435#1      ------------------------------------------------------------
consensus_11435#2      ------------------------------------------------------------
                                                                                   

consensus_11435#0      CCTGCGATGTTGTTGTGACAATGCAAGCACAGCGGGAAGCCCCGCCTGACATGCAGTGCA 420
consensus_11435#1      ------------------------------------------------------------
consensus_11435#2      -------------------------------------------------ACTGCAGTGCA 11
                                                                                   

consensus_11435#0      AAGATAAGTTCCTAGTCCAGAGCGTCATTGCACCTTCCGGTGTAACTG-TGAAGGATATC 479
consensus_11435#1      ------------------------------------------AGACAA-GGGGGGATATN 17
consensus_11435#2      AAGATAAGTTCCTAGTCCAGANCGTCATTGCNCCTTCCGGTGTAACTGTNAAAAGATATC 71
                                                                   **        ***** 

consensus_11435#0      ACGGGAGAAA-TGTTTAC-GAAGGAGTCCGG-AAATAAGGTTGAA-GAGGTAAAATTGCG 535
consensus_11435#1      -CGGGAGAAA-TGTTTAC-GAAGGAGTCCGG-AAATAAGGTTGAA-GAGGTAAAATTGCG 72
consensus_11435#2      ACGGGANAAAATGTTTACCAAAAGAATCCGGGAANTAAGGTTGAAANAAGTAAAATTGCG 131
                        ***** *** *******  ** ** ***** ** **********  * ***********

consensus_11435#0      AGTGACCTATATTGCTCCTCCACAGCCACCATCTCCTGTTCCCGAGGAATCAGAAGAAGG 595
consensus_11435#1      AGTGACCTATATTGCTCCTCCACAGCCACCATCTCCTGTTCCCGAGGAATCAGAAGAAGG 132
consensus_11435#2      ANTGACCTATATTGCTCCTCCNCAGCCACCATCTCCTGTTCCCGAAGAATCAGAAGAAG- 190
                       * ******************* *********************** ************* 

consensus_11435#0      TTCCCCATCAAGGGTTTCTGAGTCAGAAAATGGAGACAGTCTTGGTGGGGGTTTCACTAG 655
consensus_11435#1      TTCCCCATCAAGGGTTTCTGAGTCAGAAAATGGAGACAGTCTTGGTGGGGGTTTCACTAG 192
consensus_11435#2      TTCCCCATCAAGGGTTTCTGAATCAGAAAATGGAAACAGTCTTGGTGGGGGTTTCACTAN 250
                       ********************* ************ ************************ 

consensus_11435#0      AGCACTGAGAGAACGCATTGAGCCTCAAGAAAA-TTCATTAGA-GGCTGGAGCTTTGATT 713
consensus_11435#1      AGCACTGAGAGAACGCATTGAGCCTCAAGAAAA-TTCATTAGA-GGCTGGAGCTTTGATT 250
consensus_11435#2      ANCACTGAAAAAAACNCATGAGCCTCCAGAAAAATTCNTTAAAANGCTGGAGCTTTGATT 310
                       * ****** * **     ******** ****** *** *** *  ***************

consensus_11435#0      AACAAATTGAATGAA-GAGAAGAACTCTGCAA--TTCAACAGAACCATAAAATTAGA-CA 769
consensus_11435#1      AACAAATTGAATGAA-GAGAAGAACTCTGCAA--TTCAACAGAACCATAAAATTAGA-CA 306
consensus_11435#2      AACAAATTGAATGAAANANAAAAACTCTGCCAATTCCACCAGAACCATAAAATTANAANN 370
                       ***************  * ** ******** *  * ** **************** *   

consensus_11435#0      GGAACTGGATATGATGAGAC--GGGAGATAAGC-AAGAAGCGC--GGAGGGTTCTCCTTC 824
consensus_11435#1      GGAACTGGATATGATGAGAC--GGGAGATAAGC-AAGAAGCGC--GGAGGGTTCTCCTTC 361
consensus_11435#2      GGAACTGGATATGATGAAAACGGGAANATAANCCAANAAACCCCGGAAGGGTTCCCTTCC 430
                       ***************** *   ** * **** * ** ** * *  * ******* * * *

consensus_11435#0      ATAATCGTCATAATTGTCGCCTT--GATCGGGATCTTCTTGGG-CTATATGATGAAGTCA 881
consensus_11435#1      ATAATCGTCATAATTGTCGCCTT--GATCGGGATCTTCTTGGG-CTATATGATGAAGTCA 418
consensus_11435#2      ATAATCNTCATAATTGTTCCCCTTGAATCGGGATCTTCNTGGGGCTATTTAATNAAATTC 490
                       ****** **********  ** *   ************ **** **** * ** ** *  

consensus_11435#0      T--AATTCTTTGAGT-CGACATC-GAAGGGAACTGGACCCCACATT--CATGCCAAGTTA 935
consensus_11435#1      T--AATTCTTTGAGT-CGACATC-GAAGGGAACTGGACCCCACATT--CATGCCAAGTTA 472
consensus_11435#2      NTAAATCCTTTGAATTCAACNTCCAAAGGGAACTGGAACCCCCCTTTCCTTGCCCAATTT 550
                          *** ****** * * ** **  ************ *** * **  * **** * ** 

consensus_11435#0      TTCTT---GGGAGGCAAAGAGA--CCGTCATGAAGTTCTCCTTTCTGTTTTGTCAATATA 990
consensus_11435#1      TTCTT---GGGAGGCAAAGAGA--CCGTCATGAAGTTCTCCTTTCTGTTTTGTCAATATA 527
consensus_11435#2      TTTCTTTGGGAAGNCAAAGAAAAACCGNCCNGAAATTCCNCCNNNCCTGGTTTTGGTCAA 610
                       **  *   ** ** ****** *  *** *  *** ***  *      *  * *   *  *

consensus_11435#0      GGAGTGTTGCGTACGTGGGAAAATCTTCAACCAGATTAAGCTTGTTTTCTTTTGCAGTTT 1050
consensus_11435#1      GGAGTGTTACGTACGTGGGAAAATCTTCAACCAGATTAAGCTTGTTTTCTTTTGCAGTTT 587
consensus_11435#2      TAATTANGAAATNTTTGGCTT--------------------------------------- 631
                         * *      *   ***                                          

consensus_11435#0      GTTGTTTGTTGTATTGGGTGAGTTGTGCACTTCTGACACTGTAACTTGGAAATGCATTAA 1110
consensus_11435#1      GTTGNTTGNTGNATTGGGTGAGNTGGGCACTTCTGACACTGTAACTTGGAAATGCATTAA 647
consensus_11435#2      ------------------------------------------------------------
                                                                                   

consensus_11435#0      TCGCTTCTGTTGACAGAAAAAAAAAAAAAAAACACAAAAAAAAA 1154
consensus_11435#1      TCGCTTCTGNTGACAGGTCATCTTGCCAAAAA------------ 679
consensus_11435#2      --------------------------------------------
                                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)