These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11445#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 3195 fasta sequence [AGACGAAACCAACTCGTCCCCCTCTTGATCCCCCGTCTCGCTTCGCTCGGCGGCCGCGCCACCTCCAAATCTCCAAGCTCCCCGACTCGGCGACTCCCACACGCCATGCCCATCGCGCCCGCGGCTTGCAGCCATCAAACCCCCCCGCGCTCTTTCGCCTCCTGAGCCCGTCCGCTCGCCCGTGGCCATGGACGCGATCAGCAGCGAGGCGCCGGTGGGGGTGTTCGCGATCGGCCCGTCCACGGCGCTGGGCCGCGCGTTGGCGCTGCGGGTGCTGCTCTGCGGCTCCCTGGGGCGGCTGCGCCACCGCCTCGCCGCGGCGCTGCGGGCCGCGCTCCCCGTGGCGGCGGGCTGGCTGCACCCGCGGGACAACACCCGCGGGATCCTGCTCGCCGTCTGCGCCGTCGCGCTCCTGCTGCGGGTGCGGGGGCGGGGCGGCGGGCGCGCCGGGGTCCGGGCGCGGGTGCAGTCCGCGTACCGGCGCAAGTTCTGGCGGAACATGATGCGCGCCGCGCTCACCTACGAGGAGTGGGCGCACGCCGCGCGGATGCTGGACCGCGAGACCCCGCGCCGCGCCACCGACGCCGACCTCTACGACGAGGAGCTCGTGCGCAACAAGCTCCGCGAGCTCAGGCACCGCCGCCAGGAGGGCTCGCTCAGGGACATCGTCTTCTGCATGCGCGCCGACCTGCTCAGGAATCTCGGCAACATGTGCAACTCCGAGCTCCACAAGGGGAGGCTGCAGGTGCCGAAACTCATAAAGGAGTACATTGAGGAAGTATCTACTCAGCTGAAAATGGTATGTAATTCTGATTCAGACGACTTGCCTCTCGAAGAGAAACTTGCATTTATGCATGAGACAAGACATGCCTTCGGTAGAACAGCCTTGCTGCTAAGCGGGGGTGCTTCTCTGGGTTGTTTCCATGTGGGTGTTGTGAAAACATTGGTAGAACATAAGCTTCTGCCAAGGATAATTTCAGGATCTAGCGTTGGTTCTATAATGTGCTCCATAGTAGCAACAAGGTCATGGCCAGAGCTGGAGAGCTTTTTCGAGGAGTGGCATTCCTTGAAGTTCTTTGACCAGATGGGCGGGATCTTTCCCGTAGTTAAAAGGATTTTGACTCATGGAGCTGTTCATGACATTAGACATTTGCAGACGCTTTTGAGAAATCTTACCAGCAATTTGACATTCCAAGAGGCCTATGACATGACGGGCCGGATTCTTGTTGTCACTGTGTGTTCTCCAAGGAAGCATGAGCCACCTCGATGCCTGAACTATTTGACATCACCTCATGTTCTCATCTGGAGTGCAGTAACTGCTTCCTGTGCTTTTCCTGGTCTTTTTGAGGCCCAAGAGTTGATGGCAAAAGACAGATTTGGAGAAACAGTTCCTTTTCATGCTCCTTTCCTGTTGGGCTTGGAAGAAAGAGTTGGTGCTACAACTCGGCGTTGGAGAGATGGGAGCTTGGAAAGTGATTTGCCAATGAAGCAATTGAAGGAATTATTCAATGTGAATCATTTCATAGTAAGCCAAGCCAATCCTCACATAGCTCCACTGTTGAGACTCAAGGAAATTATCAGGGCTTATGGAGGCAGTTTTGCTGCCAAGTTGGCTGAACTTGCTGAGATGGAAGTTAAGCATAGGTGCAACCAAATTCTCGAACTTGGATTTCCTTTAGGAGGAATAGCCAAGTTGTTTGCTCAAGATTGGGAAGGTGATGTCACAGTTGTTATGCCAGCCACGCTTGCTCAGTATTCCAAGATCATACAGAATCCGTCTTACGCTGAGCTTCAGAAGGCTGCAAATCAGGGTAGGCGATGCACCTGGGAGAAGTTATCAGCCATTAGGGCAAATTGTGCTATTGAGCTGGTACTAGATGAATGTGTTGCCCTGTTGAACCATATGCGTAGGCTAAAGAGAAGCGCGGAAAGAGCAGCAGCTTCACAAGGACATGGTCCTACAATCAGACTCTGCCCATCTAGAAGGATTCCATCATGGAATCTCATAGCAAGAGAAAATTCATCTGGTTCCCTTGAAGAAGAATTCCTTATATCTCCTCGTACAAACCATCATGCAGATGGAGGAATTGCTGGACCATCTAACAAAAACCATCATGTCCAACAAAATGTACATGATGGCAGTGACAGTGAATCTGAGAGTATAGACTTAAACTCATGGACAAGAAGTGGTGGCCCTCTTATGAGGACAGCCTCAGCCAACAAATTCGTCAGTTTTGTTCAGAATCTTGAGATTGACACAGAGTTCAGAACAATTTCATCGAGGGAAGACAGAACTGATGTTGTAACACCAAATGCTAATTTCTTGGTTTCTCAGGCAATTGGTAGAGAATCTGTTGACAACAGTGCAATGCCTATTACTCCTGATAGGAGCTTGGGCAATTCAGGTTATGATCCTCATGATAGTAATGTCCCTAGATCTCCATTTGGTTGTTCAACAAGTATCATGGTTTCTGAAGGCGACTTACTGCAACCCGAAAAGATTGAAAATGGTATTCTGTTTAATGTTGTGAAAAGGGATACTCTTCTAACACCTACAGGTGGAGTTGAGCTTCAGGGAACATCGCAGGAACCAGACGTGGAAACAATTCAGACAGAGTGCCTTGATGATGCTTCGGATGACGACGATGTGGGATTAAATGCTGGTGATGAAGCAGCAATTGACCCTAGAGCAAACATGAGCAGCCAAAATACACAACACCAGGGGTCTTCACTAGAAAATATAAATCT-GTCCTCTTCAGT-AGATTGTGAAGCTGAAACAATTACTAGTAAATCAAAGGGTTCATCTCTTTTTGATAT-TGGTAT-GGAGATTC-GTCCAACAATCTTGAGCACGGAAAGTAGTATGTACGAGAGGTC-TTCTGCAAAAATAGGACT-GAGGACA-GTGCATGCAGAATTTATCAGCAATCCAGGTGCTGGGAAGGGAGAAGTTGACTCAGGGGCTGCTAATAAAGAATTTTCCTA-TTTTTCTCAAACAGCAGATACTGTTATATTTTCAGAAAGCTGTGAAACTGGGCAACATCATGAAGTGAATGTAGAAGCTTTAACCTCATACCCTGTTTCAGTTCTGGAAGATGATAGGTCTGGTGGCTTCAATTTGAGTGAAATAATGGCTACAACTTTCATTGCCGAAGCTGATGCTCCAATATCTAGAAGAGATGAAGTTGAGCAGCATAACGG] [+] EMBL AK120818 [AGACGAAACCAACTCGTCCCCCTCTTGATCCCCCGTCTCGCTTCGCTCGGCGGCCGCGCCACCTCCAAATCTCCAAGCTCCCCGACTCGGCGACTCCCACACGCCATGCCCATCGCGCCCGCGGCTTGCAGCCATCAAACCCCCCCGCGCTCTTTCGCCTCCTGAGCCCGTCCGCTCGCCCGTGGCCATGGACGCGATCAGCAGCGAGGCGCCGGTGGGGGTGTTCGCGATCGGCCCGTCCACGGCGCTGGGCCGCGCGTTGGCGCTGCGGGTGCTGCTCTGCGGCTCCCTGGGGCGGCTGCGCCACCGCCTCGCCGCGGCGCTGCGGGCCGCGCTCCCCGTGGCGGCGGGCTGGCTGCACCCGCGGGACAACACCCGCGGGATCCTGCTCGCCGTCTGCGCCGTCGCGCTCCTGCTGCGGGTGCGGGGGCGGGGCGGCGGGCGCGCCGGGGTCCGGGCGCGGGTGCAGTCCGCGTACCGGCGCAAGTTCTGGCGGAACATGATGCGCGCCGCGCTCACCTACGAGGAGTGGGCGCACGCCGCGCGGATGCTGGACCGCGAGACCCCGCGCCGCGCCACCGACGCCGACCTCTACGACGAGGAGCTCGTGCGCAACAAGCTCCGCGAGCTCAGGCACCGCCGCCAGGAGGGCTCGCTCAGGGACATCGTCTTCTGCATGCGCGCCGACCTGCTCAGGAATCTCGGCAACATGTGCAACTCCGAGCTCCACAAGGGGAGGCTGCAGGTGCCGAAACTCATAAAGGAGTACATTGAGGAAGTATCTACTCAGCTGAAAATGGTATGTAATTCTGATTCAGACGACTTGCCTCTCGAAGAGAAACTTGCATTTATGCATGAGACAAGACATGCCTTCGGTAGAACAGCCTTGCTGCTAAGCGGGGGTGCTTCTCTGGGTTGTTTCCATGTGGGTGTTGTGAAAACATTGGTAGAACATAAGCTTCTGCCAAGGATAATTTCAGGATCTAGCGTTGGTTCTATAATGTGCTCCATAGTAGCAACAAGGTCATGGCCAGAGCTGGAGAGCTTTTTCGAGGAGTGGCATTCCTTGAAGTTCTTTGACCAGATGGGCGGGATCTTTCCCGTAGTTAAAAGGATTTTGACTCATGGAGCTGTTCATGACATTAGACATTTGCAGACGCTTTTGAGAAATCTTACCAGCAATTTGACATTCCAAGAGGCCTATGACATGACGGGCCGGATTCTTGTTGTCACTGTGTGTTCTCCAAGGAAGCATGAGCCACCTCGATGCCTGAACTATTTGACATCACCTCATGTTCTCATCTGGAGTGCAGTAACTGCTTCCTGTGCTTTTCCTGGTCTTTTTGAGGCCCAAGAGTTGATGGCAAAAGACAGATTTGGAGAAACAGTTCCTTTTCATGCTCCTTTCCTGTTGGGCTTGGAAGAAAGAGTTGGTGCTACAACTCGGCGTTGGAGAGATGGGAGCTTGGAAAGTGATTTGCCAATGAAGCAATTGAAGGAATTATTCAATGTGAATCATTTCATAGTAAGCCAAGCCAATCCTCACATAGCTCCACTGTTGAGACTCAAGGAAATTATCAGGGCTTATGGAGGCAGTTTTGCTGCCAAGTTGGCTGAACTTGCTGAGATGGAAGTTAAGCATAGGTGCAACCAAATTCTCGAACTTGGATTTCCTTTAGGAGGAATAGCCAAGTTGTTTGCTCAAGATTGGGAAGGTGATGTCACAGTTGTTATGCCAGCCACGCTTGCTCAGTATTCCAAGATCATACAGAATCCGTCTTACGCTGAGCTTCAGAAGGCTGCAAATCAGGGTAGGCGATGCACCTGGGAGAAGTTATCAGCCATTAGGGCAAATTGTGCTATTGAGCTGGTACTAGATGAATGTGTTGCCCTGTTGAACCATATGCGTAGGCTAAAGAGAAGCGCGGAAAGAGCAGCAGCTTCACAAGGACATGGTCCTACAATCAGACTCTGCCCATCTAGAAGGATTCCATCATGGAATCTCATAGCAAGAGAAAATTCATCTGGTTCCCTTGAAGAAGAATTCCTTATATCTCCTCGTACAAACCATCATGCAGATGGAGGAATTGCTGGACCATCTAACAAAAACCATCATGTCCAACAAAATGTACATGATGGCAGTGACAGTGAATCTGAGAGTATAGACTTAAACTCATGGACAAGAAGTGGTGGCCCTCTTATGAGGACAGCCTCAGCCAACAAATTCGTCAGTTTTGTTCAGAATCTTGAGATTGACACAGAGTTCAGAACAATTTCATCGAGGGAAGACAGAACTGATGTTGTAACACCAAATGCTAATTTCTTGGTTTCTCAGGCAATTGGTAGAGAATCTGTTGACAACAGTGCAATGCCTATTACTCCTGATAGGAGCTTGGGCAATTCAGGTTATGATCCTCATGATAGTAATGTCCCTAGATCTCCATTTGGTTGTTCAACAAGTATCATGGTTTCTGAAGGCGACTTACTGCAACCCGAAAAGATTGAAAATGGTATTCTGTTTAATGTTGTGAAAAGGGATACTCTTCTAACACCTACAGGTGGAGTTGAGCTTCAGGGAACATCGCAGGAACCAGACGTGGAAACAATTCAGACAGAGTGCCTTGATGATGCTTCGGATGACGACGATGTGGGATTAAATGCTGGTGATGAAGCAGCAATTGACCCTAGAGCAAACATGAGCAGCCAAAATACACAACACCAGGGGTCTTCACTAGAAAATATAAATCT GTCCTCTTCAGT AGATTGTGAAGCTGAAACAATTACTAGTAAATCAAAGGGTTCATCTCTTTTTGATAT TGGTAT GGAGATTC GTCCAACAATCTTGAGCACGGAAAGTAGTATGTACGAGAGGTC TTCTGCAAAAATAGGACT GAGGACA GTGCATGCAGAATTTATCAGCAATCCAGGTGCTGGGAAGGGAGAAGTTGACTCAGGGGCTGCTAATAAAGAATTTTCCTA TTTTTCTCAAACAGCAGATACTGTTATATTTTCAGAAAGCTGTGAAACTGGGCAACATCATGAAGTGAATGTAGAAGCTTTAACCTCATACCCTGTTTCAGTTCTGGAAGATGATAGGTCTGGTGGCTTCAATTTGAGTGAAATAATGGCTACAACTTTCATTGCCGAAGCTGATGCTCCAATATCTAGAAGA ] [+] EMBL CB669820 [ AACTCGTCCCCCTCTTGATCCCCCGTCTCGCTTCGCTCGGCGGCCGCGCCACCTCCAAATCTCCAAGCTCCCCGACTCGGCGACTCCCACACGCCATGCCCATCGCGCCCGCGGCTTGCAGCCATCAAACCCCCCCGCGCTCTTTCGCCTCCTGAGCCCGTCCGCTCGCCCGTGGCCATGGACGCGATCAGCAGCGAGGCGCCGGTGGGGGTGTTCGCGATCGGCCCGTCCACGGCGCTGGGCCGCGCGTTGGCGCTGCGGGTGCTGCTCTGCGGCTCCCTGGGGCGGCTGCGCCACCGCCTCGCCGCGGCGCTGCGGGCCGCGCTCCCCGTGGCGGCGGGCTGGCTGCACCCGCGGGACAACACCCGCGGGATCCTGCTCGCCGTCTGCGCCGTCGCGCTCCTGCTGCGGGTGCGGGGGCGGGGCGGCGGGCGCGCCGGGGTCCGGGCGCGGGTGCAGTCCGCGTACCGGCGCAAGTTCTGGCGGAACATGATGCGCGCCGCGCTCACCTACGAGGAGTGGGCGCACGCCGCGCGGATGCTGGACCGCGAGACCCCGCGCCGCGCCACCGACGCCGACCTCTACGACGAGGAGCTCGTGCGCAACAAGCTCCGCGAGCTCATGCACCGCCGCCAGGAGGGCTCGCTCAGGGACATCGTCTTCTGCATGCGCGCCGACCTGCTCAGGAATCTCGGCAACATGTGCTACTCCGAGCTCCACAAGGGGAGGCTGCAGGTGCCGAAACTCA ] [+] EMBL CB636668 [ GCGCTGCGGGCCGCGCTCCCCGTGGCGGCGGGCTGGCTGCACCCGCGGGACAACACCCGCGGGATCCTACTCGCCGTCTGCGCCGTCGCGCTCCTGCTGCGGGTGCGGGGGCGGGGCGGCGGGCGCGCCGGGGTCCGGGCGCGGGTGCAGGCCGCGTACCGGCGCAAGTCCTCGCGGAACATGATGCGCGCCGCGCTCACCTACGAGGAGTGGGCGCACGCCGCGCGGATGCTGGACCGCGAGACCCCGCGCCGCGCCACCGACGCCGACCTCTACGACGAGGAGCTCGTGCGCAACAAGCTCCGCGAGCTCAGGCACCGCCGCCAGGAGGGCTCGCTCAGGGACATCGTCTACTGCATGCGCGCCGACCTGCTCAAGAATCTCGGCAACATGTGCAACTCCGAGCTCCACAAAGGGAGGCTGCAGGTGC ] [+] EMBL CB634963 [ AGCTGGACAGCTTTTTCGAGGAGTGGCATTCCTTGAAGTTCTTTGACCAGATGGGCGGGATCTTTCCCGTAGTTAAAAGGATTTTGACTCATGGAGCTGTTCATGACATTAGACATTTGCAGACGCTTTTGAGAAATCTTACCAGCAATTTGACATTCCAAGAGGCCTATGACATGACGGGCCGGATTCTTGTTGTCACTGTGTGTTCTCCAAGGAAGCATGAGCCACCTCGATGCCTGAACTATTTGACATCACCTCATGTTCTCATCTGGAGTGCAGTAACTGCTTCCTGTGCCTTTCCTGGTCTTTTTGAGGCCCAAGAGTTGATGGCAAAAGACAGATTTGGAGAAACAGTTCCTTTTCATGCTCCTTTCCTGTTGGGCTTGGAAGAAAGAGTTGGTGCTACAACTCGGCGTTGGAGAGATGGGAGCTTGGAAAGTGATTTGCCAATGAAGCAATTGAAGGAATTATTCAATGTGAATCATTTCATAGTAAGCCAAGCCAATCCTCACATAGCTCCACTGTTGAGACTCAAGGAAATTATCAGGGCTTATGGAGGCAGTTTTGCTGCCAAGTTGGCTGAACTTGCTGAGATGGAAGTTAAGCATAGGTGCAACCAAATTCTCGAACTTGGATTTCCTTTAGGAGGAATAGCCAAGTTGTTTGCTCAAGATTGGGAAGGTGATGTCACAGTTGTTATGCCAGCCACGCTTGCTCAGTATTCCAAGATCATACAGAATCCATCTTACGTTGAGCTTCAGAAGGCTGCAAATCAGGGTAGGCGATGCACCTGGGAGAAGTTATCAGCCATTAGGGCAAA TGTGCTATTGAGCTGGTACTAGATGAAT ] [+] EMBL AK120009 [ GTATTCTGTTTAATGTTGTGAAAAGGGATACTCTTCTAACACCTACAGGTGGAGTTGAGCTTCAGGGAACATCGCAGGAACCAGACGTGGAAACAATTCAGACAGAGTGCCTTGATGATGCTTCGGATGACGACGATGTGGGATTAAATGCTGGTGATGAAGCAGCAATTGACCCTAGAGCAAACATGAGCAGCCAAAATACACAACACCAGGGGTCTTCACTAGAAAATATAAATCT GTCCTCTTCAGT AGATTGTGAAGCTGAAACAATTACTAGTAAATCAAAGGGTTCATCTCTTTTTGATAT TGGTAT GGAGATTC GTCCAACAATCTTGAGCACGGAAAGTAGTATGTACGAGAGGTC TTCTGCAAAAATAGGACT GAGGACA GTGCATGCAGAATTTATCAGCAATCCAGGTGCTGGGAAGGGAGAAGTTGACTCAGGGGCTGCTAATAAAGAATTTTCCTA TTTTTCTCAAACAGCAGATACTGTTATATTTTCAGAAAGCTGTGAAACTGGGCAACATCATGAAGTGAATGTAGAAGCTTTAACCTCATACCCTGTTTCAGTTCTGGAAGATGATAGGTCTGGTGGCTTCAATTTGAGTGAAATAATGGCTACAACTTTCATTGCCGAAGCTGATGCTCCAATATCTAGAAGAGATGAAGTTGAGCAGCATAACG ] [+] EMBL AU057376 [ TATTCTGTTTAATGTTGTGAAAAGGGATACTCTTCTAACACCTACAGGTGGAGTTGAGCTTCAGGGAACATCGCAGGAACCAGACGTGGAAACAATTCAGACAGAGTGCCTTGATGATGCTTCGGATGACGACGATGTGGGATTAAATGCTGGTGATGAAGCAGCAATTGACCCTAGAGCAAACATGAGCAGCCAAAATACACAACACCANGGGTCTTCACTAGAAAATATAAATCTGGCCCTCTTCAGTAAGATTGTGAAGCTGAAACAATTACTAGTAAATCAAAGGGTTCATCTCTTTTTGNTATNGGGTATGGGNGATTCGGTCCcaa ] [-] EMBL CB634964 [ TAGAAAATATAAATCT GTCCTCTTCAGT AGATTGTGAAGCTGAAACAATTACTAGTAAATCAAAGGGTTCATCTCTTTTTGATAT TGGTAT GGAGATTC GTCCAACAATCTTGAGCACGGAAAGTAGTATATACGAGAGGTC TTCTGCAAAAATAGGACT GAGGACA GTGCATGCAGAATTTATCAGCAATCCAGGTGCTGGGAAGGGAGAAGTTGACTCAGGGGCTGCTAATAAAGAATTTTCCTA TTTTTCTCAAACAGCAGATACTGTTATATTTTCAGAAAGCTGTGAAACTGGGCAACATCATGAAGTGAATGTAGAAGCTTTAACCTCATACCCTGTTTCAGTTCTGGAAGATGATAGGTCTGGTGGCTTCAATTTGAGTGAAATAATGGCTACAACTTTCATTGCCGAAGCTGATGCTCCAATATCTAGAAGAGATGAAGTTGAGCAGCATAACGG] [-] EMBL CB669821 [ CAAAGGGTTCATCTCTTTTTGATAT TGGTAT GGAGATTC GTCCAACAATCTTGAGCACGGAAAGTAGTATGTACGAGAGGTC TTCTGCAAAAATAGGACT GAGGACA GTGCATGCAGAATTTATCAGCAATCCAGGTGCTGGGAAGGGAGAAGTTGACTCAGGGGCTGCTAATAAAGAATTTTCCTA TTTTTCTCAAACAGCAGATACTGTTATATTTTCAGAAAGCTGTGAAACTGGGCAACATCATGAAGTGAATGTAGAAGCTTTAACCTCATACCCTGTTTCAGTTCTGGAAGATGATAGGTCTGGTGGCTTCAATTTGAGTGAAATAATGGCTACAACTTTCATTGCCGAAGCTGATGCTCCAATATCTAGAAGAGATGAAGTTGAGCAGCATAACGG] [+] EMBL BI813211 [ ACGAGA GTCTTTCT C AAAATAGGACTGGAGGACACGTGCATGCAGAATTTATCACCAATCCA GTGCTGGGAAGGGAGAAGTTGACTCAGGGGCTGCTAATAAAGAATTTTCCTATTTTTTCTC AACAGCAGATACTGTTATATTTTCAGAAAGCTGTGAAACTGGGCAACATCATGAAGTGAATGTAGAAGCTTTAACCTCATACCCTGTTTCAGTTCTGGAAGATGATAGGTCTGGTGGCTTCAATTTGAGTGAAATAATGGCTACAACTTTCATTGCCGAAGCTGATGCTCCAATATCTAGAAGAGATGAAGTTGAGCAGCATAACG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||