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Oryza sativa
cluster # 1145 cluster # 1145       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1145#0 length = 3573 sequences # 1  
 consensus_1145#1 length = 364 sequences # 1  
consensusID : consensus_1145#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3573
fasta sequence 
                              [CACCATCTCCATCTCTCTCTCCTCTCCTATTCTCTCTCGTTCTCCTCTCTGTGCCGCCGATGGAGCTCTGCCGAAGTTCGCCGCCGCCTCCCCCGGCCGCCGGCTGCGGAGCCGCGCCTCGCCGCCGCGGCACCTTGCCGCCCTGAGCCGAGCAGGCGAGAGGAAGGAGGAAGAAGACCTCTAGCCGTTGACAGCCGGGCCCCACACCTCCCTCTCTCCCTCAAGCAGCTGACAGCCAGGCCCCACGCCCTTTTCTCTCTTTCAGTCGCTGACAGTTTTATTTTCGCGTTGAGAGCCCGAGTACGAGGAAGCTCTGGACGCCACTTTCGAGGGAGAAGACCCGCACCCTGTGCAAGGCAAGCCTCTTTGATCACATTGCCCCTAAATTTGCAAAGATATGTTATTTGAAAAGTGCATTGCTTAGTATACACGATTAACATGTTTAGGCCTCAGATTATTTATATATACAACCGACGGACCAACCTAGTAGTCACACTCACATTGCGTAGGTTGTTGTTTCCATACCTTTGATAGCTCCAAAAATGTTTGTGCCGATATCGTTACACGATTACCGAGGTAGTTTCGCTTAGCCATGCTTACGTTGTTCGCCGTGTGGGAAACTTGGGTTATTCCAAATTACATGTTTAAAAATCCCGCACGTTGTACCGAGGAGTTGTGAAATAAAATGTGTTGTTAAAGTAGTGATGATGCGGAGTCATGCCTTTGTGGTTTGGCTACGTATTGTCGTTAAGGACCGATTCCTTTGGGAAATCCATCCAAACACGTTACAGTGCGACCACACGGGTATTTATGGGATGCCTCTAGCTAAGTAAATTTTTATCACATGGGAGTTGGTGTGCCAATGGTTGTGGAATGCCGAGGATGAGGAGACGAAGTGTTACACATTTATTGCCCATCATGGGTGTCTTTTTGCTCTATTGTGGCGTGATACCAGTAAGAGTAGGAGACATCCTCGGTATTTGCTGAGTGGATGACGGTTGTCATTGCCTGATACTCGGCTATGGATCTTAGCCCAACTAGGTGGCATGCGATTTTCATGGGTTAGCTTTGGAAAGGCCTTATCATGAACTTCCGTTACCGATGGGTAGACGGTGTAAGTTTCGTGTCGTGTGGGTAAAGCGTGTAACCTCTGCAGAGATTAATGAACTGTTCAAACAGCCGTGCCCGCGGTCAAGGGCGAGTGTAAGGTGTTTCTCATAGCGTAGATTTGTTTGACAAATATTTGTGAAGAAGTGGTTATTGGGAAGGGTAACGTTTCTAGAGTCCACCTGTGTGGCAGACGGCTAACCTTTGTGGTTAGGAATGGGTCTGTGTGACCTGGGGTGTCGTCCAACACCGAGGTGTTGTTAGGGTCATGATGGCGTTGATGTGCTGAGATAATTGTGTGAATTGTGTTATTGTGAAAGTGAAAAGAAACTAATAGAGGAAACAAATTAATTGTTGTTTGTTAATGTGACAAGTTGTTGCAAAGCAACTTGTGGAATGGGTTGAGGCTTGAGGCTCCTCCCGATAACCAAAACTTGACTCACTCACTAGGAGTTTTGTGAAATAAATCACTTTGCCAAAAAGGCAGCTTTCGCAAATAAAACCTTAGCCTCCTTGTTTAAGCCAAACATGTCATTCTTTCCCCTAGCTTGCTGAGTACGTTAAGTACTCACCCTTGCCCCTTATAATAATCTATAGAGTATGAAGATGAAGACGCCGACCCGACCGCCGAGGAGTATCTCCAGGAGCAAGCCGAGTATGAAGACTTCTAGATGTTTCGTGCCTAGCCCCAAACGTCGCCTGTGGAATAAGTTAGTTACCTAGGTTTTTTGCCTAGTGCATAGTTGCTTAGTCGTTTAGTTCTCCGCGCTGTTCGCTTCTGCGCCGTCACTTTTATGGTTTTATGCAATGTTGCATTGTTCATCTATGGGCCTATCCATGATGGCAACTTATGTAAGGACTATTACCCAGTGATGTAATAAAGCACTTTAATTTGATTCCACATTTATTTTGTGTGTACCAGCTAGTGTATCTTGGGACTGGTACTATATCACAGGTAATGCATAACACCCCGGTGTGAGTTAGCTATGTTTATTGCTAACGAATGTCAGGGCGGTACAGCCGCGCCCCCGAATTTCGATCACGGAGCCATCGCCGAACTTTACAGTACCCATGACACTAGTGTCGAGATCAGCAAACGCCGAACGTACGCCTGTCATGTGGTTTGTAGCCCCTGTGTCCAAAAACCAATCTCCTGCTCCCTCACCATCACCATCGTGATCCATGACCACCTTTTTCTCAGTGAGATGCACCTGTTGTGTTGTTCGATCAGAAGTCGCTTCCCCGGCAAGCAACATGCCCATCACTTGGGCCATGAGCAGAGTCGGCTCCTCCTCGGCTTGTGTCAGGTTCATCTCCACCTGACGTTGGTGTTGGTATTTCTTAACGACATTACAAGAAATATAATTTCCAGCAATGACGCAGAAATACTCCTGGTATATTATGGTTACAGAGTTCATCCGCAAGCGCACGGATATACCATTGTAGCATTTCACCCGAGAGTATTCCAAGGGTATCGTATTTATTTTATCCCGTAGGAAGATCATGTAGAGAGAACATTGACTAATAATTTATATATTACTTTGGATAATCATATTCTAAGTAGGGGTTAAGATAATCCAAGGGTAGAGTGACACACAAGCATTACTACTTATTCTCATAATATATCATGTAAGCTAAGTGGAAAGAAAAGACAAAGAGAATCTATTCCTATACTTCTAATATACATAGTATACATACATTCTAGTTAACCGATATACTAGCTAATACCCTCTATCCGATGCCCTCCTAGTACTTCAAGAAGCCTGTTGACGGTCGTTATCGATCAATTTCGACCGTCAATATTACTAAAATAGGAGAGAACTAGTGATGCTTGCAGCATAAGTATGTTAGAATAATAATATTCCATTAGTATTAGGTTTACTAACCTTTTGCAGAGAATGATCATAAAGTGGAGGAGAATCAACATCAACACAAACGATAAATCAATAGGACGATGTCGAGGACCAGACTTATGTATGAATGTGCCAAGAACTCAGAATTGACACGACAAACTGGGTCAAAATTCACAAGTCTGCGGAGAAAAACAACATAGGAGGCCGCGAGCCAAACCATGGGCTGGTTGGGTCGGCCCCAGGTTCGGCCCAACCAGGGGGTTCGGCCGAACCTCCCTCATCGCCGCTGGATCCAGAGTTTCTTCTGGACGGTGTGGATTAGCTCCCAATGACGGTTGGAGGGTATTTCCAACCATTCCAACTGTCACAACCGTCCTTGGGAGGCTATGTAAACCCCTCACCTTCTCACTTCACTCACACACCTCAAGCAATAGCTCTCTCATTTTTCTCATGTTTAGTTTAGTAGTATCTAGCTGGTGGAATAGAATTAGAATAGGAATCAGGAATCCGGAAGTGACATATTATTTCTTTTTAATATATGTCATCTACCAAATATAATCTAATGTATTACCAGAGGTTGTTTTAATCTTTTATCTCAATTATAAATCATTTG]

[+] EMBL AK071998             [CACCATCTCCATCTCTCTCTCCTCTCCTATTCTCTCTCGTTCTCCTCTCTGTGCCGCCGATGGAGCTCTGCCGAAGTTCGCCGCCGCCTCCCCCGGCCGCCGGCTGCGGAGCCGCGCCTCGCCGCCGCGGCACCTTGCCGCCCTGAGCCGAGCAGGCGAGAGGAAGGAGGAAGAAGACCTCTAGCCGTTGACAGCCGGGCCCCACACCTCCCTCTCTCCCTCAAGCAGCTGACAGCCAGGCCCCACGCCCTTTTCTCTCTTTCAGTCGCTGACAGTTTTATTTTCGCGTTGAGAGCCCGAGTACGAGGAAGCTCTGGACGCCACTTTCGAGGGAGAAGACCCGCACCCTGTGCAAGGCAAGCCTCTTTGATCACATTGCCCCTAAATTTGCAAAGATATGTTATTTGAAAAGTGCATTGCTTAGTATACACGATTAACATGTTTAGGCCTCAGATTATTTATATATACAACCGACGGACCAACCTAGTAGTCACACTCACATTGCGTAGGTTGTTGTTTCCATACCTTTGATAGCTCCAAAAATGTTTGTGCCGATATCGTTACACGATTACCGAGGTAGTTTCGCTTAGCCATGCTTACGTTGTTCGCCGTGTGGGAAACTTGGGTTATTCCAAATTACATGTTTAAAAATCCCGCACGTTGTACCGAGGAGTTGTGAAATAAAATGTGTTGTTAAAGTAGTGATGATGCGGAGTCATGCCTTTGTGGTTTGGCTACGTATTGTCGTTAAGGACCGATTCCTTTGGGAAATCCATCCAAACACGTTACAGTGCGACCACACGGGTATTTATGGGATGCCTCTAGCTAAGTAAATTTTTATCACATGGGAGTTGGTGTGCCAATGGTTGTGGAATGCCGAGGATGAGGAGACGAAGTGTTACACATTTATTGCCCATCATGGGTGTCTTTTTGCTCTATTGTGGCGTGATACCAGTAAGAGTAGGAGACATCCTCGGTATTTGCTGAGTGGATGACGGTTGTCATTGCCTGATACTCGGCTATGGATCTTAGCCCAACTAGGTGGCATGCGATTTTCATGGGTTAGCTTTGGAAAGGCCTTATCATGAACTTCCGTTACCGATGGGTAGACGGTGTAAGTTTCGTGTCGTGTGGGTAAAGCGTGTAACCTCTGCAGAGATTAATGAACTGTTCAAACAGCCGTGCCCGCGGTCAAGGGCGAGTGTAAGGTGTTTCTCATAGCGTAGATTTGTTTGACAAATATTTGTGAAGAAGTGGTTATTGGGAAGGGTAACGTTTCTAGAGTCCACCTGTGTGGCAGACGGCTAACCTTTGTGGTTAGGAATGGGTCTGTGTGACCTGGGGTGTCGTCCAACACCGAGGTGTTGTTAGGGTCATGATGGCGTTGATGTGCTGAGATAATTGTGTGAATTGTGTTATTGTGAAAGTGAAAAGAAACTAATAGAGGAAACAAATTAATTGTTGTTTGTTAATGTGACAAGTTGTTGCAAAGCAACTTGTGGAATGGGTTGAGGCTTGAGGCTCCTCCCGATAACCAAAACTTGACTCACTCACTAGGAGTTTTGTGAAATAAATCACTTTGCCAAAAAGGCAGCTTTCGCAAATAAAACCTTAGCCTCCTTGTTTAAGCCAAACATGTCATTCTTTCCCCTAGCTTGCTGAGTACGTTAAGTACTCACCCTTGCCCCTTATAATAATCTATAGAGTATGAAGATGAAGACGCCGACCCGACCGCCGAGGAGTATCTCCAGGAGCAAGCCGAGTATGAAGACTTCTAGATGTTTCGTGCCTAGCCCCAAACGTCGCCTGTGGAATAAGTTAGTTACCTAGGTTTTTTGCCTAGTGCATAGTTGCTTAGTCGTTTAGTTCTCCGCGCTGTTCGCTTCTGCGCCGTCACTTTTATGGTTTTATGCAATGTTGCATTGTTCATCTATGGGCCTATCCATGATGGCAACTTATGTAAGGACTATTACCCAGTGATGTAATAAAGCACTTTAATTTGATTCCACATTTATTTTGTGTGTACCAGCTAGTGTATCTTGGGACTGGTACTATATCACAGGTAATGCATAACACCCCGGTGTGAGTTAGCTATGTTTATTGCTAACGAATGTCAGGGCGGTACAGCCGCGCCCCCGAATTTCGATCACGGAGCCATCGCCGAACTTTACAGTACCCATGACACTAGTGTCGAGATCAGCAAACGCCGAACGTACGCCTGTCATGTGGTTTGTAGCCCCTGTGTCCAAAAACCAATCTCCTGCTCCCTCACCATCACCATCGTGATCCATGACCACCTTTTTCTCAGTGAGATGCACCTGTTGTGTTGTTCGATCAGAAGTCGCTTCCCCGGCAAGCAACATGCCCATCACTTGGGCCATGAGCAGAGTCGGCTCCTCCTCGGCTTGTGTCAGGTTCATCTCCACCTGACGTTGGTGTTGGTATTTCTTAACGACATTACAAGAAATATAATTTCCAGCAATGACGCAGAAATACTCCTGGTATATTATGGTTACAGAGTTCATCCGCAAGCGCACGGATATACCATTGTAGCATTTCACCCGAGAGTATTCCAAGGGTATCGTATTTATTTTATCCCGTAGGAAGATCATGTAGAGAGAACATTGACTAATAATTTATATATTACTTTGGATAATCATATTCTAAGTAGGGGTTAAGATAATCCAAGGGTAGAGTGACACACAAGCATTACTACTTATTCTCATAATATATCATGTAAGCTAAGTGGAAAGAAAAGACAAAGAGAATCTATTCCTATACTTCTAATATACATAGTATACATACATTCTAGTTAACCGATATACTAGCTAATACCCTCTATCCGATGCCCTCCTAGTACTTCAAGAAGCCTGTTGACGGTCGTTATCGATCAATTTCGACCGTCAATATTACTAAAATAGGAGAGAACTAGTGATGCTTGCAGCATAAGTATGTTAGAATAATAATATTCCATTAGTATTAGGTTTACTAACCTTTTGCAGAGAATGATCATAAAGTGGAGGAGAATCAACATCAACACAAACGATAAATCAATAGGACGATGTCGAGGACCAGACTTATGTATGAATGTGCCAAGAACTCAGAATTGACACGACAAACTGGGTCAAAATTCACAAGTCTGCGGAGAAAAACAACATAGGAGGCCGCGAGCCAAACCATGGGCTGGTTGGGTCGGCCCCAGGTTCGGCCCAACCAGGGGGTTCGGCCGAACCTCCCTCATCGCCGCTGGATCCAGAGTTTCTTCTGGACGGTGTGGATTAGCTCCCAATGACGGTTGGAGGGTATTTCCAACCATTCCAACTGTCACAACCGTCCTTGGGAGGCTATGTAAACCCCTCACCTTCTCACTTCACTCACACACCTCAAGCAATAGCTCTCTCATTTTTCTCATGTTTAGTTTAGTAGTATCTAGCTGGTGGAATAGAATTAGAATAGGAATCAGGAATCCGGAAGTGACATATTATTTCTTTTTAATATATGTCATCTACCAAATATAATCTAATGTATTACCAGAGGTTGTTTTAATCTTTTATCTCAATTATAAATCATTTG]




>consensus_1145#0
CACCATCTCCATCTCTCTCTCCTCTCCTATTCTCTCTCGTTCTCCTCTCTGTGCCGCCGA
TGGAGCTCTGCCGAAGTTCGCCGCCGCCTCCCCCGGCCGCCGGCTGCGGAGCCGCGCCTC
GCCGCCGCGGCACCTTGCCGCCCTGAGCCGAGCAGGCGAGAGGAAGGAGGAAGAAGACCT
CTAGCCGTTGACAGCCGGGCCCCACACCTCCCTCTCTCCCTCAAGCAGCTGACAGCCAGG
CCCCACGCCCTTTTCTCTCTTTCAGTCGCTGACAGTTTTATTTTCGCGTTGAGAGCCCGA
GTACGAGGAAGCTCTGGACGCCACTTTCGAGGGAGAAGACCCGCACCCTGTGCAAGGCAA
GCCTCTTTGATCACATTGCCCCTAAATTTGCAAAGATATGTTATTTGAAAAGTGCATTGC
TTAGTATACACGATTAACATGTTTAGGCCTCAGATTATTTATATATACAACCGACGGACC
AACCTAGTAGTCACACTCACATTGCGTAGGTTGTTGTTTCCATACCTTTGATAGCTCCAA
AAATGTTTGTGCCGATATCGTTACACGATTACCGAGGTAGTTTCGCTTAGCCATGCTTAC
GTTGTTCGCCGTGTGGGAAACTTGGGTTATTCCAAATTACATGTTTAAAAATCCCGCACG
TTGTACCGAGGAGTTGTGAAATAAAATGTGTTGTTAAAGTAGTGATGATGCGGAGTCATG
CCTTTGTGGTTTGGCTACGTATTGTCGTTAAGGACCGATTCCTTTGGGAAATCCATCCAA
ACACGTTACAGTGCGACCACACGGGTATTTATGGGATGCCTCTAGCTAAGTAAATTTTTA
TCACATGGGAGTTGGTGTGCCAATGGTTGTGGAATGCCGAGGATGAGGAGACGAAGTGTT
ACACATTTATTGCCCATCATGGGTGTCTTTTTGCTCTATTGTGGCGTGATACCAGTAAGA
GTAGGAGACATCCTCGGTATTTGCTGAGTGGATGACGGTTGTCATTGCCTGATACTCGGC
TATGGATCTTAGCCCAACTAGGTGGCATGCGATTTTCATGGGTTAGCTTTGGAAAGGCCT
TATCATGAACTTCCGTTACCGATGGGTAGACGGTGTAAGTTTCGTGTCGTGTGGGTAAAG
CGTGTAACCTCTGCAGAGATTAATGAACTGTTCAAACAGCCGTGCCCGCGGTCAAGGGCG
AGTGTAAGGTGTTTCTCATAGCGTAGATTTGTTTGACAAATATTTGTGAAGAAGTGGTTA
TTGGGAAGGGTAACGTTTCTAGAGTCCACCTGTGTGGCAGACGGCTAACCTTTGTGGTTA
GGAATGGGTCTGTGTGACCTGGGGTGTCGTCCAACACCGAGGTGTTGTTAGGGTCATGAT
GGCGTTGATGTGCTGAGATAATTGTGTGAATTGTGTTATTGTGAAAGTGAAAAGAAACTA
ATAGAGGAAACAAATTAATTGTTGTTTGTTAATGTGACAAGTTGTTGCAAAGCAACTTGT
GGAATGGGTTGAGGCTTGAGGCTCCTCCCGATAACCAAAACTTGACTCACTCACTAGGAG
TTTTGTGAAATAAATCACTTTGCCAAAAAGGCAGCTTTCGCAAATAAAACCTTAGCCTCC
TTGTTTAAGCCAAACATGTCATTCTTTCCCCTAGCTTGCTGAGTACGTTAAGTACTCACC
CTTGCCCCTTATAATAATCTATAGAGTATGAAGATGAAGACGCCGACCCGACCGCCGAGG
AGTATCTCCAGGAGCAAGCCGAGTATGAAGACTTCTAGATGTTTCGTGCCTAGCCCCAAA
CGTCGCCTGTGGAATAAGTTAGTTACCTAGGTTTTTTGCCTAGTGCATAGTTGCTTAGTC
GTTTAGTTCTCCGCGCTGTTCGCTTCTGCGCCGTCACTTTTATGGTTTTATGCAATGTTG
CATTGTTCATCTATGGGCCTATCCATGATGGCAACTTATGTAAGGACTATTACCCAGTGA
TGTAATAAAGCACTTTAATTTGATTCCACATTTATTTTGTGTGTACCAGCTAGTGTATCT
TGGGACTGGTACTATATCACAGGTAATGCATAACACCCCGGTGTGAGTTAGCTATGTTTA
TTGCTAACGAATGTCAGGGCGGTACAGCCGCGCCCCCGAATTTCGATCACGGAGCCATCG
CCGAACTTTACAGTACCCATGACACTAGTGTCGAGATCAGCAAACGCCGAACGTACGCCT
GTCATGTGGTTTGTAGCCCCTGTGTCCAAAAACCAATCTCCTGCTCCCTCACCATCACCA
TCGTGATCCATGACCACCTTTTTCTCAGTGAGATGCACCTGTTGTGTTGTTCGATCAGAA
GTCGCTTCCCCGGCAAGCAACATGCCCATCACTTGGGCCATGAGCAGAGTCGGCTCCTCC
TCGGCTTGTGTCAGGTTCATCTCCACCTGACGTTGGTGTTGGTATTTCTTAACGACATTA
CAAGAAATATAATTTCCAGCAATGACGCAGAAATACTCCTGGTATATTATGGTTACAGAG
TTCATCCGCAAGCGCACGGATATACCATTGTAGCATTTCACCCGAGAGTATTCCAAGGGT
ATCGTATTTATTTTATCCCGTAGGAAGATCATGTAGAGAGAACATTGACTAATAATTTAT
ATATTACTTTGGATAATCATATTCTAAGTAGGGGTTAAGATAATCCAAGGGTAGAGTGAC
ACACAAGCATTACTACTTATTCTCATAATATATCATGTAAGCTAAGTGGAAAGAAAAGAC
AAAGAGAATCTATTCCTATACTTCTAATATACATAGTATACATACATTCTAGTTAACCGA
TATACTAGCTAATACCCTCTATCCGATGCCCTCCTAGTACTTCAAGAAGCCTGTTGACGG
TCGTTATCGATCAATTTCGACCGTCAATATTACTAAAATAGGAGAGAACTAGTGATGCTT
GCAGCATAAGTATGTTAGAATAATAATATTCCATTAGTATTAGGTTTACTAACCTTTTGC
AGAGAATGATCATAAAGTGGAGGAGAATCAACATCAACACAAACGATAAATCAATAGGAC
GATGTCGAGGACCAGACTTATGTATGAATGTGCCAAGAACTCAGAATTGACACGACAAAC
TGGGTCAAAATTCACAAGTCTGCGGAGAAAAACAACATAGGAGGCCGCGAGCCAAACCAT
GGGCTGGTTGGGTCGGCCCCAGGTTCGGCCCAACCAGGGGGTTCGGCCGAACCTCCCTCA
TCGCCGCTGGATCCAGAGTTTCTTCTGGACGGTGTGGATTAGCTCCCAATGACGGTTGGA
GGGTATTTCCAACCATTCCAACTGTCACAACCGTCCTTGGGAGGCTATGTAAACCCCTCA
CCTTCTCACTTCACTCACACACCTCAAGCAATAGCTCTCTCATTTTTCTCATGTTTAGTT
TAGTAGTATCTAGCTGGTGGAATAGAATTAGAATAGGAATCAGGAATCCGGAAGTGACAT
ATTATTTCTTTTTAATATATGTCATCTACCAAATATAATCTAATGTATTACCAGAGGTTG
TTTTAATCTTTTATCTCAATTATAAATCATTTG

consensusID : consensus_1145#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 364
fasta sequence 
                              [TAGAAAAGCAAGCCGAGTATGAAGACTTCTAGATGTTTCGTGCCTAGCCCCAAACGTCGCCTGTGGAATAAGTTAGTTACCTAGGTTCTTTGCCTAGTGCATAGTTGCTTAGTCGTTTAGTTCTCCGCGCTGTTCGCTTCTGCGCCGTCACTTTTATGNGTTTATGCAATGTTGCATTGTTCGTCTATGGGCCTATCCATGATGGCAACTTATATAAGGACTATTACCCAGTGATGTAATAAAGCACTTTAATTTGATTCCACATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF321895             [TAGAAAAGCAAGCCGAGTATGAAGACTTCTAGATGTTTCGTGCCTAGCCCCAAACGTCGCCTGTGGAATAAGTTAGTTACCTAGGTTCTTTGCCTAGTGCATAGTTGCTTAGTCGTTTAGTTCTCCGCGCTGTTCGCTTCTGCGCCGTCACTTTTATGNGTTTATGCAATGTTGCATTGTTCGTCTATGGGCCTATCCATGATGGCAACTTATATAAGGACTATTACCCAGTGATGTAATAAAGCACTTTAATTTGATTCCACATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_1145#1
TAGAAAAGCAAGCCGAGTATGAAGACTTCTAGATGTTTCGTGCCTAGCCCCAAACGTCGC
CTGTGGAATAAGTTAGTTACCTAGGTTCTTTGCCTAGTGCATAGTTGCTTAGTCGTTTAG
TTCTCCGCGCTGTTCGCTTCTGCGCCGTCACTTTTATGNGTTTATGCAATGTTGCATTGT
TCGTCTATGGGCCTATCCATGATGGCAACTTATATAAGGACTATTACCCAGTGATGTAAT
AAAGCACTTTAATTTGATTCCACATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1145#0      CACCATCTCCATCTCTCTCTCCTCTCCTATTCTCTCTCGTTCTCCTCTCTGTGCCGCCGA 60
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      TGGAGCTCTGCCGAAGTTCGCCGCCGCCTCCCCCGGCCGCCGGCTGCGGAGCCGCGCCTC 120
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      GCCGCCGCGGCACCTTGCCGCCCTGAGCCGAGCAGGCGAGAGGAAGGAGGAAGAAGACCT 180
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      CTAGCCGTTGACAGCCGGGCCCCACACCTCCCTCTCTCCCTCAAGCAGCTGACAGCCAGG 240
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      CCCCACGCCCTTTTCTCTCTTTCAGTCGCTGACAGTTTTATTTTCGCGTTGAGAGCCCGA 300
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      GTACGAGGAAGCTCTGGACGCCACTTTCGAGGGAGAAGACCCGCACCCTGTGCAAGGCAA 360
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      GCCTCTTTGATCACATTGCCCCTAAATTTGCAAAGATATGTTATTTGAAAAGTGCATTGC 420
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      TTAGTATACACGATTAACATGTTTAGGCCTCAGATTATTTATATATACAACCGACGGACC 480
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      AACCTAGTAGTCACACTCACATTGCGTAGGTTGTTGTTTCCATACCTTTGATAGCTCCAA 540
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      AAATGTTTGTGCCGATATCGTTACACGATTACCGAGGTAGTTTCGCTTAGCCATGCTTAC 600
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      GTTGTTCGCCGTGTGGGAAACTTGGGTTATTCCAAATTACATGTTTAAAAATCCCGCACG 660
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      TTGTACCGAGGAGTTGTGAAATAAAATGTGTTGTTAAAGTAGTGATGATGCGGAGTCATG 720
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      CCTTTGTGGTTTGGCTACGTATTGTCGTTAAGGACCGATTCCTTTGGGAAATCCATCCAA 780
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      ACACGTTACAGTGCGACCACACGGGTATTTATGGGATGCCTCTAGCTAAGTAAATTTTTA 840
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      TCACATGGGAGTTGGTGTGCCAATGGTTGTGGAATGCCGAGGATGAGGAGACGAAGTGTT 900
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      ACACATTTATTGCCCATCATGGGTGTCTTTTTGCTCTATTGTGGCGTGATACCAGTAAGA 960
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      GTAGGAGACATCCTCGGTATTTGCTGAGTGGATGACGGTTGTCATTGCCTGATACTCGGC 1020
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      TATGGATCTTAGCCCAACTAGGTGGCATGCGATTTTCATGGGTTAGCTTTGGAAAGGCCT 1080
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      TATCATGAACTTCCGTTACCGATGGGTAGACGGTGTAAGTTTCGTGTCGTGTGGGTAAAG 1140
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      CGTGTAACCTCTGCAGAGATTAATGAACTGTTCAAACAGCCGTGCCCGCGGTCAAGGGCG 1200
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      AGTGTAAGGTGTTTCTCATAGCGTAGATTTGTTTGACAAATATTTGTGAAGAAGTGGTTA 1260
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      TTGGGAAGGGTAACGTTTCTAGAGTCCACCTGTGTGGCAGACGGCTAACCTTTGTGGTTA 1320
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      GGAATGGGTCTGTGTGACCTGGGGTGTCGTCCAACACCGAGGTGTTGTTAGGGTCATGAT 1380
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      GGCGTTGATGTGCTGAGATAATTGTGTGAATTGTGTTATTGTGAAAGTGAAAAGAAACTA 1440
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      ATAGAGGAAACAAATTAATTGTTGTTTGTTAATGTGACAAGTTGTTGCAAAGCAACTTGT 1500
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      GGAATGGGTTGAGGCTTGAGGCTCCTCCCGATAACCAAAACTTGACTCACTCACTAGGAG 1560
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      TTTTGTGAAATAAATCACTTTGCCAAAAAGGCAGCTTTCGCAAATAAAACCTTAGCCTCC 1620
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      TTGTTTAAGCCAAACATGTCATTCTTTCCCCTAGCTTGCTGAGTACGTTAAGTACTCACC 1680
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      CTTGCCCCTTATAATAATCTATAGAGTATGAAGATGAAGACGCCGACCCGACCGCCGAGG 1740
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      AGTATCTCCAGGAGCAAGCCGAGTATGAAGACTTCTAGATGTTTCGTGCCTAGCCCCAAA 1800
consensus_1145#1      ------TAGAAAAGCAAGCCGAGTATGAAGACTTCTAGATGTTTCGTGCCTAGCCCCAAA 54
                            *  *  ************************************************

consensus_1145#0      CGTCGCCTGTGGAATAAGTTAGTTACCTAGGTTTTTTGCCTAGTGCATAGTTGCTTAGTC 1860
consensus_1145#1      CGTCGCCTGTGGAATAAGTTAGTTACCTAGGTTCTTTGCCTAGTGCATAGTTGCTTAGTC 114
                      ********************************* **************************

consensus_1145#0      GTTTAGTTCTCCGCGCTGTTCGCTTCTGCGCCGTCACTTTTATGGTTTTATGCAATGTTG 1920
consensus_1145#1      GTTTAGTTCTCCGCGCTGTTCGCTTCTGCGCCGTCACTTTTATGNGTTTATGCAATGTTG 174
                      ********************************************  **************

consensus_1145#0      CATTGTTCATCTATGGGCCTATCCATGATGGCAACTTATGTAAGGACTATTACCCAGTGA 1980
consensus_1145#1      CATTGTTCGTCTATGGGCCTATCCATGATGGCAACTTATATAAGGACTATTACCCAGTGA 234
                      ******** ****************************** ********************

consensus_1145#0      TGTAATAAAGCACTTTAATTTGATTCCACATTTATTTTGTGTGTACCAGCTAGTGTATCT 2040
consensus_1145#1      TGTAATAAAGCACTTTAATTTGATTCCACATTTAAAAAAAAAAAAAAAAAAAAAAAAAAA 294
                      **********************************          *  *   *    *   

consensus_1145#0      TGGGACTGGTACTATATCACAGGTAATGCATAACACCCCGGTGTGAGTTAGCTATGTTTA 2100
consensus_1145#1      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 354
                          *     *  * *  * *   **   * ** *          *   *   *     *

consensus_1145#0      TTGCTAACGAATGTCAGGGCGGTACAGCCGCGCCCCCGAATTTCGATCACGGAGCCATCG 2160
consensus_1145#1      AAAAAAAAAA-------------------------------------------------- 364
                           **  *                                                  

consensus_1145#0      CCGAACTTTACAGTACCCATGACACTAGTGTCGAGATCAGCAAACGCCGAACGTACGCCT 2220
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      GTCATGTGGTTTGTAGCCCCTGTGTCCAAAAACCAATCTCCTGCTCCCTCACCATCACCA 2280
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      TCGTGATCCATGACCACCTTTTTCTCAGTGAGATGCACCTGTTGTGTTGTTCGATCAGAA 2340
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      GTCGCTTCCCCGGCAAGCAACATGCCCATCACTTGGGCCATGAGCAGAGTCGGCTCCTCC 2400
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      TCGGCTTGTGTCAGGTTCATCTCCACCTGACGTTGGTGTTGGTATTTCTTAACGACATTA 2460
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      CAAGAAATATAATTTCCAGCAATGACGCAGAAATACTCCTGGTATATTATGGTTACAGAG 2520
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      TTCATCCGCAAGCGCACGGATATACCATTGTAGCATTTCACCCGAGAGTATTCCAAGGGT 2580
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      ATCGTATTTATTTTATCCCGTAGGAAGATCATGTAGAGAGAACATTGACTAATAATTTAT 2640
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      ATATTACTTTGGATAATCATATTCTAAGTAGGGGTTAAGATAATCCAAGGGTAGAGTGAC 2700
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      ACACAAGCATTACTACTTATTCTCATAATATATCATGTAAGCTAAGTGGAAAGAAAAGAC 2760
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      AAAGAGAATCTATTCCTATACTTCTAATATACATAGTATACATACATTCTAGTTAACCGA 2820
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      TATACTAGCTAATACCCTCTATCCGATGCCCTCCTAGTACTTCAAGAAGCCTGTTGACGG 2880
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      TCGTTATCGATCAATTTCGACCGTCAATATTACTAAAATAGGAGAGAACTAGTGATGCTT 2940
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      GCAGCATAAGTATGTTAGAATAATAATATTCCATTAGTATTAGGTTTACTAACCTTTTGC 3000
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      AGAGAATGATCATAAAGTGGAGGAGAATCAACATCAACACAAACGATAAATCAATAGGAC 3060
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      GATGTCGAGGACCAGACTTATGTATGAATGTGCCAAGAACTCAGAATTGACACGACAAAC 3120
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      TGGGTCAAAATTCACAAGTCTGCGGAGAAAAACAACATAGGAGGCCGCGAGCCAAACCAT 3180
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      GGGCTGGTTGGGTCGGCCCCAGGTTCGGCCCAACCAGGGGGTTCGGCCGAACCTCCCTCA 3240
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      TCGCCGCTGGATCCAGAGTTTCTTCTGGACGGTGTGGATTAGCTCCCAATGACGGTTGGA 3300
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      GGGTATTTCCAACCATTCCAACTGTCACAACCGTCCTTGGGAGGCTATGTAAACCCCTCA 3360
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      CCTTCTCACTTCACTCACACACCTCAAGCAATAGCTCTCTCATTTTTCTCATGTTTAGTT 3420
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      TAGTAGTATCTAGCTGGTGGAATAGAATTAGAATAGGAATCAGGAATCCGGAAGTGACAT 3480
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      ATTATTTCTTTTTAATATATGTCATCTACCAAATATAATCTAATGTATTACCAGAGGTTG 3540
consensus_1145#1      ------------------------------------------------------------
                                                                                  

consensus_1145#0      TTTTAATCTTTTATCTCAATTATAAATCATTTG 3573
consensus_1145#1      ---------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)