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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11451#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2925 fasta sequence
[CCGCCGCCGCCGCCGCCGCTCCATCCTCCTCACGGAGAAGCGCGGGAAATCACACCTCGTCGCAGCCAAGATCTCCTCCAGTCCAAACGCATCAAAGATTCCAAGATGTGCTCTGGAGATGATATTGATGGAGACATGAGGGTTGAAGCAACACAACACAGGGATATAAGGCGCTACAAGTGTGAATTTTGCACGGTTGTTAGGTCCAAAAAATGTCTCATCCGAGCTCACATGGTTGCTCATCATAAGGAAGAACTGGACAAATCGGAAATCTACAAGTCAAATGGGGAAAAGGTTGTTCATGAAGGTGACCACACCTGCCAAGAGTGTGGTGCTTCTTTCCAGAAGCCAGCTCATCTGAAGCAGCATATGCAAAGTCACTCTGATGAGGTTGGCATTTCTCATATGTGCATACAACATGATATTGCTTTTTTGTTGGAATGGTGCTGGGATTAGTTTTTTTGGAAACATTTAAACATAACATTCTTGTATGGTTTTTCTCCGTCCGCTGATCTGGTTGTCAAAGAAATTGTTCTTATCTACTTCAATTTGCTAAAAACAAGTGTTTTGCAGGATATAGATTCTTAACTGTGTGAAGCATTGGATCCCAAAGAACTCCAAAATGCGATGAGGCATATTTAATCTTGTCTGGACTAGTAACAGGTTGGGATGACCACCTGTGAAGCTCCAACAGGATTGCCTCCTCACGCTCTTTCAGGAGGTTTGTCCTTGCTTGTATTAGTTCTTTTCTTTTTTACTATTTTGATTATTATTCAACTTCATGGGATAGCCTGCATCTCCTTGTTTCCAATTAAGTACTAATGTCTCCTTTGTTGTATGCACATGTGCTGGAATTCATTGTTTATCAATTTGCCTTGTGGTATGCTATACATGATATCTTTAATTTTTATTAGTAACAAGGTTTTTTACAGCATACATATACATAAATAGTGTTTTTTTACAGCATGCATAAATGGTGAAAACTGATTACTGCTTAATTATTGACTAGTTGCTGGCTATTTTACATTTTTTTGATATTGCAAATCTTGTGAAATGGATCCATGCAGTGAATTTGGGAGGTTATCTTCTCCTTTGTTCTAATGTTCTCTCTCACTCTCTTTGGGCTTCTGGAACCTGGTTTTGGAGGTCCTTAGTTGGAACAAAGAGGGGATCCAAGATCAAAATACCATCTCAGAAAGCTAGGGCCTTCTGTAATAGGTTCATTTAGCTCGCTATGGTGTTGATATCTCCATCATATACAAAACTACAATATGTTCCGTTGCAAATTATATATGAATTGTTTTAGCTGATAAACACCTGTGCACAACTTTTTGCTGATAAATAGTACTACTTCTTATAACCTGAAACGGAGGGAGTAGGCATTGAATAGAATAGGTTATGGATCCTTTGGAGAATAAGGTTAGCAAATATCCTTCATTCATCCTACTATTTCTTTGGATCTCCTTTTGGGAGCTTTGAGAAGAGGTGAGAGGATCCAACATCAAAATGTCACCTCAGAAAGCTAGGACTATTCATCATTGGTTCTCAGCTCGCTATGGTGATTATACTCCCTTTTATCTCTATCATCTTAATGGAAAACACTGAACATTTAGGTATTCGTTGCATATTCCGTTAACCAGTTTACTAGATAATTTATTTTAGATAATTTATAAGTATGAAAGAAATGTGTAAGCTTACAGCAGCTTCAGTTTTGACTCGTTCCCTTCTTGACTGTAGAGATCGTTCATTTGCCCACTTGAAGACTGCCCTTTCAGCTACATTAGGAAAGATCACTTGAACCGTCATATGCTTAAGCATCAAGGGAAGTTGTTTACCTGCTCTATGGATGGTTGTGGTAGGAAGTTCAGTATAAAGGCAAATATGCAAAGGCATGTAAAGGAAATCCATGAGGATGAAACTGCTACTAAAAGCAACCGGCAGTTTGTTTGCAAGGAGGAGGGCTGTAACAAGGTTTTCAAGTATGCTTCAAAGATGAAGAAACATGAAGAATCACATGTGAAATTGGACTACGTGGAAGTAGTCTGCTGTGAACCAGGCTGCATGAAGACATTCACAAATGTTGAATGTTTGAGGGCTCATAATCAGGCTTGCCATCAATATGTTCAGTGTGATATCTGTGGGGAAAAACACCTGAAGAA-GAACATTAAAAGGCACCTACGAGCCCATGAGGAGGTGCCATCTACTGAAAGGATAAAATGCAGTTTTGAGGGCTGTGAATGCTCTTTTTCCAATAAATCAAATTTAACCAAACATATAAAGGCGTCCCATGATCAAGTAAAACCTTTCGCATGTCGATTCACGGGGTGTGAAAAGGTGTTTCCATACAAGCATGTCAGGGACAACCATGAGAAATCCAGCGCTCATGTATACACTCAGGCAAACTTCACGGAGATGGACGAGCAGTTACTCTCGTGTCCGAGAGGTGGACGGAAGAGGAAAGCTGTGACTGTCGAAACTCTTACGCGCAAGAGGGTGACCATGCACGGCGACGCTTCGTCGTTGGACAATGGAACTGAGTACCTGCGCTGGTTGCTTTCTGGTGGGGATGATGATT-CGAGCCAAACTCATTAGCCGTATCATCTTTGCATCTGATTGTGATGGTCATGGTGTCAATGGCTCAATGCTTTGTCGTAAAGGGGTGTGCTAGCCCACTCACGTTGGTAGTTAGATGGCCGTGGTGTTTTTGTTGTAAGTAGTTGGTCTGAATTTAGAAAGTGCAGCAGTTTTAGAGGAAGCCTACTAGTAGTATATATTTGTAGCATAATGGCGCAGTTTGAGTTGTGAGTTGTAAGTATTTTGATTCTTTACTGTTTTGACCACTGTTCTTGGAACCTCAAAATTATTTGACTTGTTGAATGCAAAAAATGATGTGATTACAAGTTTTGGTTCTTCTTGAAAAGGTTG]
[+] EMBL AK100473 [CCGCCGCCGCCGCCGCCGCTCCATCCTCCTCACGGAGAAGCGCGGGAAATCACACCTCGTCGCAGCCAAGATCTCCTCCAGTCCAAACGCATCAAAGATTCCAAGATGTGCTCTGGAGATGATATTGATGGAGACATGAGGGTTGAAGCAACACAACACAGGGATATAAGGCGCTACAAGTGTGAATTTTGCACGGTTGTTAGGTCCAAAAAATGTCTCATCCGAGCTCACATGGTTGCTCATCATAAGGAAGAACTGGACAAATCGGAAATCTACAAGTCAAATGGGGAAAAGGTTGTTCATGAAGGTGACCACACCTGCCAAGAGTGTGGTGCTTCTTTCCAGAAGCCAGCTCATCTGAAGCAGCATATGCAAAGTCACTCTGATGAGGTTGGCATTTCTCATATGTGCATACAACATGATATTGCTTTTTTGTTGGAATGGTGCTGGGATTAGTTTTTTTGGAAACATTTAAACATAACATTCTTGTATGGTTTTTCTCCGTCCGCTGATCTGGTTGTCAAAGAAATTGTTCTTATCTACTTCAATTTGCTAAAAACAAGTGTTTTGCAGGATATAGATTCTTAACTGTGTGAAGCATTGGATCCCAAAGAACTCCAAAATGCGATGAGGCATATTTAATCTTGTCTGGACTAGTAACAGGTTGGGATGACCACCTGTGAAGCTCCAACAGGATTGCCTCCTCACGCTCTTTCAGGAGGTTTGTCCTTGCTTGTATTAGTTCTTTTCTTTTTTACTATTTTGATTATTATTCAACTTCATGGGATAGCCTGCATCTCCTTGTTTCCAATTAAGTACTAATGTCTCCTTTGTTGTATGCACATGTGCTGGAATTCATTGTTTATCAATTTGCCTTGTGGTATGCTATACATGATATCTTTAATTTTTATTAGTAACAAGGTTTTTTACAGCATACATATACATAAATAGTGTTTTTTTACAGCATGCATAAATGGTGAAAACTGATTACTGCTTAATTATTGACTAGTTGCTGGCTATTTTACATTTTTTTGATATTGCAAATCTTGTGAAATGGATCCATGCAGTGAATTTGGGAGGTTATCTTCTCCTTTGTTCTAATGTTCTCTCTCACTCTCTTTGGGCTTCTGGAACCTGGTTTTGGAGGTCCTTAGTTGGAACAAAGAGGGGATCCAAGATCAAAATACCATCTCAGAAAGCTAGGGCCTTCTGTAATAGGTTCATTTAGCTCGCTATGGTGTTGATATCTCCATCATATACAAAACTACAATATGTTCCGTTGCAAATTATATATGAATTGTTTTAGCTGATAAACACCTGTGCACAACTTTTTGCTGATAAATAGTACTACTTCTTATAACCTGAAACGGAGGGAGTAGGCATTGAATAGAATAGGTTATGGATCCTTTGGAGAATAAGGTTAGCAAATATCCTTCATTCATCCTACTATTTCTTTGGATCTCCTTTTGGGAGCTTTGAGAAGAGGTGAGAGGATCCAACATCAAAATGTCACCTCAGAAAGCTAGGACTATTCATCATTGGTTCTCAGCTCGCTATGGTGATTATACTCCCTTTTATCTCTATCATCTTAATGGAAAACACTGAACATTTAGGTATTCGTTGCATATTCCGTTAACCAGTTTACTAGATAATTTATTTTAGATAATTTATAAGTATGAAAGAAATGTGTAAGCTTACAGCAGCTTCAGTTTTGACTCGTTCCCTTCTTGACTGTAGAGATCGTTCATTTGCCCACTTGAAGACTGCCCTTTCAGCTACATTAGGAAAGATCACTTGAACCGTCATATGCTTAAGCATCAAGGGAAGTTGTTTACCTGCTCTATGGATGGTTGTGGTAGGAAGTTCAGTATAAAGGCAAATATGCAAAGGCATGTAAAGGAAATCCATGAGGATGAAACTGCTACTAAAAGCAACCGGCAGTTTGTTTGCAAGGAGGAGGGCTGTAACAAGGTTTTCAAGTATGCTTCAAAGATGAAGAAACATGAAGAATCACATGTGAAATTGGACTACGTGGAAGTAGTCTGCTGTGAACCAGGCTGCATGAAGACATTCACAAATGTTGAATGTTTGAGGGCTCATAATCAGGCTTGCCATCAATATGTTCAGTGTGATATCTGTGGGGAAAAACACCTGAAGAA GAACATTAAAAGGCACCTACGAGCCCATGAGGAGGTGCCATCTACTGAAAGGATAAAATGCAGTTTTGAGGGCTGTGAATGCTCTTTTTCCAATAAATCAAATTTAACCAAACATATAAAGGCGTCCCATGATCAAGTAAAACCTTTCGCATGTCGATTCACGGGGTGTGAAAAGGTGTTTCCATACAAGCATGTCAGGGACAACCATGAGAAATCCAGCGCTCATGTATACACTCAGGCAAACTTCACGGAGATGGACGAGCAGTTACTCTCGTGTCCGAGAGGTGGACGGAAGAGGAAAGCTGTGACTGTCGAAACTCTTACGCGCAAGAGGGTGACCATGCACGGCGACGCTTCGTCGTTGGACAATGGAACTGAGTACCTGCGCTGGTTGCTTTCTGGTGGGGATGATGATT CGAGCCAAACTCATTAGCCGTATCATCTTTGCATCTGATTGTGATGGTCATGGTGTCAATGGCTCAATGCTTTGTCGTAAAGGGGTGTGCTAGCCCACTCACGTTGGTAGTTAGATGGCCGTGGTGTTTTTGTTGTAAGTAGTTGGTCTGAATTTAGAAAGTGCAGCAGTTTTAGAGGAAGCCTACTAGTAGTATATATTTGTAGCATAATGGCGCAGTTTGAGTTGTGAGTTGTAAGTATTTTGATTCTTTACTGTTTTGACCACTGTTCTTGGAACCTCAAAATTATTTGACTTGTTGAATGCAAAAAATGATGTGAT ]
[-] EMBL CB647431 [ TTCACAAATGTTGAATGTTTGAGGGCTCATAATCAGGCTTGCCATCAATATGTTCAGTGTGATATCTGTGGGGAAAAACACCTGAAGAA GAACATTAAAAGGCACCTACGAGCCCATGAGGAGGTGCCATCTACTGAAAGGATAAAATGCAGTTTTGAGGGCTGTGAATGCTCTTTTTCCAATAAATCAAATTTAACCAAACATATAAAGGCGTCCCATGATCAAGTAAAACCTTTCGCATGTCGATTCACGGGGTGTGAAAAGGTGTTTCCATACAAGCATGTCAGGGACAACCATGAGAAATCCAGCGCTCATGTATACACTCAGGCAAACTTCACGGAGATGGACGAGCAGTTACTCTCGTGTCCGAGAGGTGGACGGAAGAGGAAAGCTGTGACTGTCGAAACTCTTACGCGCAAGAGGGTGACCATGCACGGCGACGCTTCGTCGTTGGACAATGGAACTGAGTACCTGCGCTGGTTGCTTTCTGGTGGGGATGATGATT CGAGCCAAACTCATTAGCCGTATCATCTTTGCATCTGATTGTGATGGTCATGGTGTCAATGGCTCAATGCTTTGTCGTAAAGGGGTGTGCTAGCCCACTCACGTTGGTAGTTAGATGGCCGTGGTGTTTTTGTTGTAAGTAGTTGGTCTGAATTTAGAAAGTGCAGCAGTTTTAGAGGAAGCCTACTAGTAGTATATATTTGTAGCATAATGGCGCAGTTTGAGTTGTGAGTTGTAAGTATTTTGATTCTTTACTGTTTTGACCACTGTTCTTGGAACCTCAAAATTATTTGACTTGTTGAATGCAAAAAATGA ]
[+] EMBL C97597 [ AATTTTTGAGGNCTCATAATCAGGCTTCCCATCAATATGTNCAGTGTGATATCTGTGGGGAAAAACNCNTGAAGAAGGACCTTTAAAAGGCACTTACGAGCCCATGAGGA GTGCCATCTACTGAAAGGATAAAATGCAGTTTTGAGGGCTGTGAATGCTCTTTTTCCAATAAATCAAATTTACCCAAACATATAAAGGCGTCCCATGATCAAGTAAAACCTTTCGCATGTCGATTCACGGGGTGTGAAAAGGTGTTTCCATACAAGCATGTCAGGGACAACCATGAGAAATCCAGCGCTCATGTATACACTCAGGCAAACTTCACGGAGATGGACGAGCAGTTACTCTCGTGTCCGAGAGGTGGACGGAAGAGGAAAGCTGTGACTGTCGAAACTCTTACGCGCAAGAGGGTGACCATGCACGGCGACGCTTCGTCGTTGGACAATGGAACTGAGTACCTGCGCTGGTTGCTTTCTGGTGGGGATGATGATT CGAGCCAAACTCATTAGCCGTATCATCTTTGCATCTGATTGTGATGGTCATGGTGTCAATGGCTCAATGCTTTGTCGTAAAGGGGTGTGCTAGCCCACTCACGTTGGTAGTTAGATGGCCGTGGTGTTTTTGTTGTAAGTAGTTGGTCTGAATTTAGAAAGTGCAGCAGTTTTAGAGGAAGCCTACTAGTAGTATATATTTGTAGCATAATGGCGCAGTTTGAGTTGTGAGTTGTAAGTATTTTGATTCTTTACTGTTTTGACCACTGTTCTTGGAACNTCAAAATTATTTGACTTGTTGAATGCAAAAAATGATGTGATTACAAaaaaaaaaa ]
[+] EMBL CF196320 [ TAAAAGGCACCTACGAGCCCATGAGGAGGTGCCATCTACTGAAAGGATAAAATGCAGTTTTGAGGGCTGTGAATGCTCTTTTTCCAATAAATCAAATTTAACCAAACATATAAAGGCGTCCCATGATCAAGTAAAACCTTTCGCATGTCGATTCACGGGGTGTGAAAAGGTGTTTCCATACAAGCATGTCAGGGACAACCATGAGAAATCCAGCGCTCATGTATACACTCAGGCAAACTTCACGGAGATGGACGAGCAGTTACTCTCGTGTCCGAGNNNTGGACGGAAGnnnnnngc ]
[-] EMBL CB644061 [ GAGGTGCCATCTACTGAAAGGATAAAATGCAGTTTTGAGGGCTGTGAATGCTCTTTTTCCAATAAATCAAATTTAACCAAACATATAAAGGCGTCCCATGATCAAGTAAAACCTTTCGCATGTCGATTCACGGGGTGTGAAAAGGTGTTTCCATACAAGCATGTCAGGGACAACCATGAGAAATCCAGCGCTCATGTATACACTCAGGCAAACTTCACGGAGATGGACGAGCAGTTACTCTCGTGTCCGAGAGGTGGACGGAAGAGGAAAGCTGTGACTGTCGAAACTCTTACGCGCAAGAGGGTGACCATGCACGGCGACGCTTCGTCGTTGGACAATGGAACTGAGTACCTGCGCTGGTTGCTTTCTGGTGGGGATGATGATT CGAGCCAAACTCATTAGCCGTATCATCTTTGCATCTGATTGTGATGGTCATGGTGTCAATGGCTCAATGCTTTGTCGTAAAGGGGTGTGCTAGCCCACTCACGTTGGTAGTTAGATGGCCGTGGTGTTTTTGTTGTAAGTAGTTGGTCTGAATTTAGAAAGTGCAGCAGTTTTAGAGGAAGCCTACTAGTAGTATATATTTGTAGCATAATGGCGCAGTTTGAGTTGTGAGTTGTAAGTATTTTGATTCTTTACTGTTTTGACCACTGTTCTTGGACCCTCAAAATTATTTGACTTGTAAAGGGCAAAAAATGATGTGATTc ]
[-] EMBL CB964816 [ ACTCTTACGCGCAAGAGGGTGACCATGCACGGCGACGCTTCGTCGTTGGACAATGGAACTGAGTACCTGCGCTGGTTGCTTTCTGGTGGGGATGATGATT CGAGCCAAACTCATTAGCCGTATCATCTTTGCATCTGATTGTGATGGTCATGGTGTCAATGGCTCAATGCTTTGTCGTAAAGGGGTGTGCTAGCCCACTCACGTTGGTAGTTAGATGGCCGTGGTGTTTTTGTTGTAAGTAGTTGGTCTGAATTTAGAAAGTGCAGCAGTTTTAGAGGAAGCCTACTAGTAGTATATATTTGTAGCATAATGGCGCAGTTTGAGTTGTGAGTTGTAAGTATTTTGATTCTTTACTGTTTTGACCCCTGTTCTTGGAACCTC AAATTATTTGACTTGTTGAATGCCAAAAATGATGTGATTACAAGTTTTGGTTCTTCTTGAAAAGG ]
[-] EMBL BU673499 [ ACTCTTACGCGCAAGAGGGTGACCATGCACGGCGACGCTTCGTCGTTGGACAATGGAACTGAGTACCTGCGCTGGTTGCTTTCTGGTGGGGATGATGATTGCGAGCCTAACTCATTAGCCGTATCATCTTTGCATCTGATTGTGATGTGCATGGTGTCAATGGCTCAATGCTTTGTCGTAAAGGGGTGTGCTAGCCCACTCACGTTGGTAGTTAGATGCCCGTGGTGTTTTTGTTGTAAGTAGTTGGTCTGAATTTAGAAAGTGCAGCAGTTTTAGAGGAAGCCTACTAGTAGTATATATTTGTAGCATAATGGCGCAGTTTGAGTTGTGAGTTGTAAGTATTTTGATTCTTTACTGTTTTGACCACTGTTCTTGGAACCTCAAAATTATTTGACTTGTTGAATGCAAAAAATGATGTGATAACAAGTTTTGGTTCTTCTTGAAAAGGTTG]
consensusID : consensus_11451#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 778 fasta sequence
[GATATAAGGCGCTACAAGTGTGAATTTTGCACGGTTGTTAGGTCCAAAAAATGTCTCATCCGAGCTCACATGGTTGCTCATCATAAGGAAGAACTGGACAAATCGGAAATCTACAAGTCAAATGGGGAAAAGGTTGTTCATGAAGGTGACCACACCTGCCAAGAGTGTGGTGCTTCTTTCCAGAAGCCAGCTCATCTGAAGCAGCATATGCAAAGTCACTCTGATGAGAGATCGTTCATTTGCCCACTTGAAGACTGCCCTTTCAGCTACATTAGGAAAGATCACTTGAACCGTCATATGCTTAAGCATCAAGGGAAGTTGTTTACCTGCTCTATGGATGGTTGTGGTAGGAAGTTCAGTATAAAGGCAAATATGCAAAGGCATGTAAAGGAAATCCATGAGGATGAAACTGCTACTAAAAGCAACCGGCAGTTTGTTTGCAAGGAGGAGGGCTGTAACAAGGTTTTCAAGTATGCTTCAAAGATGAAGAAACATGAAGAATCACATGTGAAATTGGACTACGTGGAAGTAGTCTGCTGTGAACCAGGCTGCATGAAGACATTCACAAATGTTGAATGTTTGAGGGCTCATAATCAGGCTTGCCATCAATATGTTCAGTGTGATATCTGTGGGGAAAAACACCTGAAGAAGAACATTAAAAGGCACCTACGAGCCCATGAGGAGGTGCCATCTACTGAAAGGATAAAATGCAGTTTTGAGGGCTGTGAATGCTCTTTTTCCAATAAATCAAATTTAACCAAACATATAAAGGCGTCCC]
[+] EMBL CB643451 [GATATAAGGCGCTACAAGTGTGAATTTTGCACGGTTGTTAGGTCCAAAAAATGTCTCATCCGAGCTCACATGGTTGCTCATCATAAGGAAGAACTGGACAAATCGGAAATCTACAAGTCAAATGGGGAAAAGGTTGTTCATGAAGGTGACCACACCTGCCAAGAGTGTGGTGCTTCTTTCCAGAAGCCAGCTCATCTGAAGCAGCATATGCAAAGTCACTCTGATGAGAGATCGTTCATTTGCCCACTTGAAGACTGCCCTTTCAGCTACATTAGGAAAGATCACTTGAACCGTCATATGCTTAAGCATCAAGGGAAGTTGTTTACCTGCTCTATGGATGGTTGTGGTAGGAAGTTCAGTATAAAGGCAAATATGCAAAGGCATGTAAAGGAAATCCATGAGGATGAAACTGCTACTAAAAGCAACCGGCAGTTTGTTTGCAAGGAGGAGGGCTGTAACAAGGTTTTCAAGTATGCTTCAAAGATGAAGAAACATGAAGAATCACATGTGAAATTGGACTACGTGGAAGTAGTCTGCTGTGAACCAGGCTGCATGAAGACATTCACAAATGTTGAATGTTTGAGGGCTCATAATCAGGCTTGCCATCAATATGTTCAGTGTGATATCTGTGGGGAAAAACACCTGAAGAAGAACATTAAAAGGCACCTACGAGCCCATGAGGAGGTGCCATCTACTGAAAGGATAAAATGCAGTTTTGAGGGCTGTGAATGCTCTTTTTCCAATAAATCAAATTTAACCAAACATATAAAGGCGTCCC]
consensusID : consensus_11451#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 752 fasta sequence
[AATAGGTTATGGATCCTTTGGAGAATAAGGTTAGCAAATATCCTTCATTCATCCTACTATTTCTTTGGATCTCCTTTTGGGAGCTTTGAGAAGAGGTGAGAGGATCCAACATCAAAATGTCACCTCAGAAAGCTAGGACTATTCATCATTGGTTCTCAGCTCGCTATGGTGATTATACTCCCTTTTATCTCTATCATCTTAATGGAAAACACTGAACATTTAGGTATTCGTTGCATATTCCGTTAACCAGTTTACTAGATAATTTATTTTAGATAATTTATAAGTATGAAAGAAATGTGTAAGCTTACAGCAGCTTCAGTTTTGACTCGTTCCCTTCTTGACTGTAGAGATCGTTCATTTGCCCACTTGAAGACTGCCCTTTCAGCTACATTAGGAAAGATCACTTGAACCGTCATATGCTTAAGCATCAAGGGAAGTTGTTTACCTGCTCTATGGATGGTTGTGGTAGGAAGTTCAGTATAAAGGCAAATATGCAAAGGCATGTAAAGGAAATCCATGAGGATGAAACTGCTACTAAAAGCAACCGGCAGTTTGTTTGCAAGGAGGAGGGCTGTAACAAGGTTTCAAGTATGCTTCAAAGATGAAGAAACATGAAGAATCACATGGTATCTCCTCAGTACTTATAGTAGATCAGGCGCTGCCTTGTAAATTTCAGAACTAAAAAACTGCAGCTCCAATCCATGCATTATATAATTAATCATGCTAATGGGAANCCCAGAATTAAATTAATT]
[+] EMBL C97596 [AATAGGTTATGGATCCTTTGGAGAATAAGGTTAGCAAATATCCTTCATTCATCCTACTATTTCTTTGGATCTCCTTTTGGGAGCTTTGAGAAGAGGTGAGAGGATCCAACATCAAAATGTCACCTCAGAAAGCTAGGACTATTCATCATTGGTTCTCAGCTCGCTATGGTGATTATACTCCCTTTTATCTCTATCATCTTAATGGAAAACACTGAACATTTAGGTATTCGTTGCATATTCCGTTAACCAGTTTACTAGATAATTTATTTTAGATAATTTATAAGTATGAAAGAAATGTGTAAGCTTACAGCAGCTTCAGTTTTGACTCGTTCCCTTCTTGACTGTAGAGATCGTTCATTTGCCCACTTGAAGACTGCCCTTTCAGCTACATTAGGAAAGATCACTTGAACCGTCATATGCTTAAGCATCAAGGGAAGTTGTTTACCTGCTCTATGGATGGTTGTGGTAGGAAGTTCAGTATAAAGGCAAATATGCAAAGGCATGTAAAGGAAATCCATGAGGATGAAACTGCTACTAAAAGCAACCGGCAGTTTGTTTGCAAGGAGGAGGGCTGTAACAAGGTTTCAAGTATGCTTCAAAGATGAAGAAACATGAAGAATCACATGGTATCTCCTCAGTACTTATAGTAGATCAGGCGCTGCCTTGTAAATTTCAGAACTAAAAAACTGCAGCTCCAATCCATGCATTATATAATTAATCATGCTAATGGGAANCCCAGAATTAAATTAATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11451#0 CCGCCGCCGCCGCCGCCGCTCCATCCTCCTCACGGAGAAGCGCGGGAAATCACACCTCGT 60
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 CGCAGCCAAGATCTCCTCCAGTCCAAACGCATCAAAGATTCCAAGATGTGCTCTGGAGAT 120
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 GATATTGATGGAGACATGAGGGTTGAAGCAACACAACACAGGGATATAAGGCGCTACAAG 180
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 TGTGAATTTTGCACGGTTGTTAGGTCCAAAAAATGTCTCATCCGAGCTCACATGGTTGCT 240
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 CATCATAAGGAAGAACTGGACAAATCGGAAATCTACAAGTCAAATGGGGAAAAGGTTGTT 300
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 CATGAAGGTGACCACACCTGCCAAGAGTGTGGTGCTTCTTTCCAGAAGCCAGCTCATCTG 360
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 AAGCAGCATATGCAAAGTCACTCTGATGAGGTTGGCATTTCTCATATGTGCATACAACAT 420
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 GATATTGCTTTTTTGTTGGAATGGTGCTGGGATTAGTTTTTTTGGAAACATTTAAACATA 480
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 ACATTCTTGTATGGTTTTTCTCCGTCCGCTGATCTGGTTGTCAAAGAAATTGTTCTTATC 540
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 TACTTCAATTTGCTAAAAACAAGTGTTTTGCAGGATATAGATTCTTAACTGTGTGAAGCA 600
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 TTGGATCCCAAAGAACTCCAAAATGCGATGAGGCATATTTAATCTTGTCTGGACTAGTAA 660
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 CAGGTTGGGATGACCACCTGTGAAGCTCCAACAGGATTGCCTCCTCACGCTCTTTCAGGA 720
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 GGTTTGTCCTTGCTTGTATTAGTTCTTTTCTTTTTTACTATTTTGATTATTATTCAACTT 780
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 CATGGGATAGCCTGCATCTCCTTGTTTCCAATTAAGTACTAATGTCTCCTTTGTTGTATG 840
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 CACATGTGCTGGAATTCATTGTTTATCAATTTGCCTTGTGGTATGCTATACATGATATCT 900
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 TTAATTTTTATTAGTAACAAGGTTTTTTACAGCATACATATACATAAATAGTGTTTTTTT 960
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 ACAGCATGCATAAATGGTGAAAACTGATTACTGCTTAATTATTGACTAGTTGCTGGCTAT 1020
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 TTTACATTTTTTTGATATTGCAAATCTTGTGAAATGGATCCATGCAGTGAATTTGGGAGG 1080
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 TTATCTTCTCCTTTGTTCTAATGTTCTCTCTCACTCTCTTTGGGCTTCTGGAACCTGGTT 1140
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 TTGGAGGTCCTTAGTTGGAACAAAGAGGGGATCCAAGATCAAAATACCATCTCAGAAAGC 1200
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 TAGGGCCTTCTGTAATAGGTTCATTTAGCTCGCTATGGTGTTGATATCTCCATCATATAC 1260
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 AAAACTACAATATGTTCCGTTGCAAATTATATATGAATTGTTTTAGCTGATAAACACCTG 1320
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 TGCACAACTTTTTGCTGATAAATAGTACTACTTCTTATAACCTGAAACGGAGGGAGTAGG 1380
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 CATTGAATAGAATAGGTTATGGATCCTTTGGAGAATAAGGTTAGCAAATATCCTTCATTC 1440
consensus_11451#2 ----------AATAGGTTATGGATCCTTTGGAGAATAAGGTTAGCAAATATCCTTCATTC 50
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 ATCCTACTATTTCTTTGGATCTCCTTTTGGGAGCTTTGAGAAGAGGTGAGAGGATCCAAC 1500
consensus_11451#2 ATCCTACTATTTCTTTGGATCTCCTTTTGGGAGCTTTGAGAAGAGGTGAGAGGATCCAAC 110
consensus_11451#1 ---------------------------------------------------------GAT 3
*
consensus_11451#0 ATCAAAATGTCACCTCAGAAAGCTAGGACTATTCATCATTGGTTCTCAGCTCGCTATGGT 1560
consensus_11451#2 ATCAAAATGTCACCTCAGAAAGCTAGGACTATTCATCATTGGTTCTCAGCTCGCTATGGT 170
consensus_11451#1 AT-AAGGCGCTAC------AAGTGTGAATTTTGCAC----GGTTGTTAGGTCCAAAAAAT 52
** ** * ** *** * * * * ** **** * ** ** * *
consensus_11451#0 GATT-ATACTCCCTTTTATCTCTA-TCATCTTAATGGAAAACACTGAACATTTAGGTATT 1618
consensus_11451#2 GATT-ATACTCCCTTTTATCTCTA-TCATCTTAATGGAAAACACTGAACATTTAGGTATT 228
consensus_11451#1 GTCTCATCCGAGCTCACATGGTTGCTCATCATAA--GGAAGAACTGGACAAATCGGAAAT 110
* * ** * ** ** * ***** *** * ** **** *** * ** * *
consensus_11451#0 CGTTGCATATTCCGTTAACCAGTTTACTAGATAATTTATTTTAGATAATTTATAAGTATG 1678
consensus_11451#2 CGTTGCATATTCCGTTAACCAGTTTACTAGATAATTTATTTTAGATAATTTATAAGTATG 288
consensus_11451#1 CTACAAGTCAAATGGGGAAAAGGTTGTTCATGAAGGTGACC-ACACCTGCCAAGAGTGTG 169
* * * * ** ** * ** * * * * *** **
consensus_11451#0 AAAGAAATGTGTA-AGCTTACAGCAGCTTCAGTTTTG-ACTCGTTCCCTTCTTGACTGTA 1736
consensus_11451#2 AAAGAAATGTGTA-AGCTTACAGCAGCTTCAGTTTTG-ACTCGTTCCCTTCTTGACTGTA 346
consensus_11451#1 GTGCTTCTTTCCAGAAGCCAGCTCATCTGAAGCAGCATATGCAAAGTCACTCTGATG--A 227
* * * * * ** ** ** * * * *** *
consensus_11451#0 GAGATCGTTCATTTGCCCACTTGAAGACTGCCCTTTCAGCTACATTAGGAAAGATCACTT 1796
consensus_11451#2 GAGATCGTTCATTTGCCCACTTGAAGACTGCCCTTTCAGCTACATTAGGAAAGATCACTT 406
consensus_11451#1 GAGATCGTTCATTTGCCCACTTGAAGACTGCCCTTTCAGCTACATTAGGAAAGATCACTT 287
************************************************************
consensus_11451#0 GAACCGTCATATGCTTAAGCATCAAGGGAAGTTGTTTACCTGCTCTATGGATGGTTGTGG 1856
consensus_11451#2 GAACCGTCATATGCTTAAGCATCAAGGGAAGTTGTTTACCTGCTCTATGGATGGTTGTGG 466
consensus_11451#1 GAACCGTCATATGCTTAAGCATCAAGGGAAGTTGTTTACCTGCTCTATGGATGGTTGTGG 347
************************************************************
consensus_11451#0 TAGGAAGTTCAGTATAAAGGCAAATATGCAAAGGCATGTAAAGGAAATCCATGAGGATGA 1916
consensus_11451#2 TAGGAAGTTCAGTATAAAGGCAAATATGCAAAGGCATGTAAAGGAAATCCATGAGGATGA 526
consensus_11451#1 TAGGAAGTTCAGTATAAAGGCAAATATGCAAAGGCATGTAAAGGAAATCCATGAGGATGA 407
************************************************************
consensus_11451#0 AACTGCTACTAAAAGCAACCGGCAGTTTGTTTGCAAGGAGGAGGGCTGTAACAAGGTTTT 1976
consensus_11451#2 AACTGCTACTAAAAGCAACCGGCAGTTTGTTTGCAAGGAGGAGGGCTGTAACAAGGTTT- 585
consensus_11451#1 AACTGCTACTAAAAGCAACCGGCAGTTTGTTTGCAAGGAGGAGGGCTGTAACAAGGTTTT 467
***********************************************************
consensus_11451#0 CAAGTATGCTTCAAAGATGAAGAAACATGAAGAATCACATGTGAAATT----GGACTACG 2032
consensus_11451#2 CAAGTATGCTTCAAAGATGAAGAAACATGAAGAATCACATGGTATCTCCTCAGTACTTAT 645
consensus_11451#1 CAAGTATGCTTCAAAGATGAAGAAACATGAAGAATCACATGTGAAATT----GGACTACG 523
***************************************** * * * ***
consensus_11451#0 TGGAAGTAGTCTGCTGTGAACCAGGCTGCATGAAGACATTCACAAATGTTGAATGTTTGA 2092
consensus_11451#2 AGTAGATCAGGCGCTGCCTTGTAAATTTCAGAACTAAAAAACTGCAGCTCCAATCCATGC 705
consensus_11451#1 TGGAAGTAGTCTGCTGTGAACCAGGCTGCATGAAGACATTCACAAATGTTGAATGTTTGA 583
* * * **** * * ** * * * * * *** **
consensus_11451#0 GGGCTCATAATCAGGCTTGCCATCAATATGTTCAGTGTGATATCTGTGGGGAAAAACACC 2152
consensus_11451#2 AT-TATATAATTAATCATGCTAATGGGAANCCCAGAATTAAATTAATT------------ 752
consensus_11451#1 GGGCTCATAATCAGGCTTGCCATCAATATGTTCAGTGTGATATCTGTGGGGAAAAACACC 643
***** * * *** * * *** * * ** *
consensus_11451#0 TGAAGAAGAACATTAAAAGGCACCTACGAGCCCATGAGGAGGTGCCATCTACTGAAAGGA 2212
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 TGAAGAAGAACATTAAAAGGCACCTACGAGCCCATGAGGAGGTGCCATCTACTGAAAGGA 703
consensus_11451#0 TAAAATGCAGTTTTGAGGGCTGTGAATGCTCTTTTTCCAATAAATCAAATTTAACCAAAC 2272
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 TAAAATGCAGTTTTGAGGGCTGTGAATGCTCTTTTTCCAATAAATCAAATTTAACCAAAC 763
consensus_11451#0 ATATAAAGGCGTCCCATGATCAAGTAAAACCTTTCGCATGTCGATTCACGGGGTGTGAAA 2332
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ATATAAAGGCGTCCC--------------------------------------------- 778
consensus_11451#0 AGGTGTTTCCATACAAGCATGTCAGGGACAACCATGAGAAATCCAGCGCTCATGTATACA 2392
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 CTCAGGCAAACTTCACGGAGATGGACGAGCAGTTACTCTCGTGTCCGAGAGGTGGACGGA 2452
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 AGAGGAAAGCTGTGACTGTCGAAACTCTTACGCGCAAGAGGGTGACCATGCACGGCGACG 2512
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 CTTCGTCGTTGGACAATGGAACTGAGTACCTGCGCTGGTTGCTTTCTGGTGGGGATGATG 2572
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 ATTCGAGCCAAACTCATTAGCCGTATCATCTTTGCATCTGATTGTGATGGTCATGGTGTC 2632
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 AATGGCTCAATGCTTTGTCGTAAAGGGGTGTGCTAGCCCACTCACGTTGGTAGTTAGATG 2692
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 GCCGTGGTGTTTTTGTTGTAAGTAGTTGGTCTGAATTTAGAAAGTGCAGCAGTTTTAGAG 2752
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 GAAGCCTACTAGTAGTATATATTTGTAGCATAATGGCGCAGTTTGAGTTGTGAGTTGTAA 2812
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 GTATTTTGATTCTTTACTGTTTTGACCACTGTTCTTGGAACCTCAAAATTATTTGACTTG 2872
consensus_11451#2 ------------------------------------------------------------
consensus_11451#1 ------------------------------------------------------------
consensus_11451#0 TTGAATGCAAAAAATGATGTGATTACAAGTTTTGGTTCTTCTTGAAAAGGTTG 2925
consensus_11451#2 -----------------------------------------------------
consensus_11451#1 -----------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||