These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11476#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1375 fasta sequence [TAGTCGATCTCCCCGTCGCTTCGGTCTCGACTCCTCGTCTCCTCGGCCGCCGCCGCCGCCGCCGCCGCCGAGCAGAGGCGATCTCCACCCGCGAGCAGCGGCGCCGTCGCCGGTGTGCTGCTTCTCCCGTCGGACCCTCGCCGGTGAGCACACTTCAAGATGCCTCGCTATGATGACCGTGATCGCTACGATGACCGTTACGGCGGCAACACGAGGCTGTACGTAGGTCGTCTTTCCTCGCGCACCCGGACCCGGGACCTTGAAGACCTTTTCGGCAGATATGGGAGAGTGCGATATGTGGATATGAAGCACGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGAGGCAAGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAAGGGGTTCCACGTGGCCCTGGAGGATCACGTGAATATATGGGCAGAGGACCACCACCTGGTTCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGACTGGAAAAACAGATGCTATCGGTGTGGAGACAGGGGCCATATAGAGAGGGACTGCCGGAACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTGCTCAAGATCCCCATCCCCTCGTCGTGGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGCCGCTCCCAGTCTCCAAGGAGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGGAGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCCCTAGGGGGAGCCCCCGTGACAGTCGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCCCTAGGGGAAGCCCTCGTGATAGCCGCAGCCCTAGGAGAAGTGCTTCACCACCCAACGGGA-GGAACCGCAGCCCTACCCCTAATGCCAGCAGGAGTCCTGCACCA-AGGGACAGCAGGAG-CCCA-ATGAGAGCT-GACAGCCGTAGCCCTGCTGA-CCATGAG-CGCCG-TGACATGAGTACAGCTGCCA-ATGGCCGGAG-CCCAAGCCCCAGGGATTATGAAGACAATGGCAATCATCGGGCCTCGCCTAGAGGAAGC-GCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGTATCAGTCTTAAAGTTTATGAATCA-ATTTAAACCTGTTGGAGATTTTAGTCATATCTATGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATAAGTTGATAGACCATGCCATCTGTTGGTTGTACTCCGAACTGCATAAAATGGAATTTGCGGCCCACCGCGGTTTCTGGAAAAAAA] [+] EMBL AK071635 [TAGTCGATCTCCCCGTCGCTTCGGTCTCGACTCCTCGTCTCCTCGGCCGCCGCCGCCGCCGCCGCCGCCGAGCAGAGGCGATCTCCACCCGCGAGCAGCGGCGCCGTCGCCGGTGTGCTGCTTCTCCCGTCGGACCCTCGCCGGTGAGCACACTTCAAGATGCCTCGCTATGATGACCGTGATCGCTACGATGACCGTTACGGCGGCAACACGAGGCTGTACGTAGGTCGTCTTTCCTCGCGCACCCGGACCCGGGACCTTGAAGACCTTTTCGGCAGATATGGGAGAGTGCGATATGTGGATATGAAGCACGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGAGGCAAGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAAGGGGTTCCACGTGGCCCTGGAGGATCACGTGAATATATGGGCAGAGGACCACCACCTGGTTCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGACTGGAAAAACAGATGCTATCGGTGTGGAGACAGGGGCCATATAGAGAGGGACTGCCGGAACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTGCTCAAGATCCCCATCCCCTCGTCGTGGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGCCGCTCCCAGTCTCCAAGGAGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGGAGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCCCTAGGGGGAGCCCCCGTGACAGTCGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCCCTAGGGGAAGCCCTCGTGATAGCCGCAGCCCTAGGAGAAGTGCTTCACCACCCAACGGGA GGAACCGCAGCCCTACCCCTAATGCCAGCAGGAGTCCTGCACCA AGGGACAGCAGGAG CCCA ATGAGAGCT GACAGCCGTAGCCCTGCTGA CCATGAG CGCCG TGACATGAGTACAGCTGCCA ATGGCCGGAG CCCAAGCCCCAGGGATTATGAAGACAATGGCAATCATCGGGCCTCGCCTAGAGGAAGC GCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGTATCAGTCTTAAAGTTTATGAATCA ATTTAAACCTGTTGGAGATTTTAGTCATATCTATGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATAAGTTGATAGACCATGCCATCTGTTGGTTGTACTCCGAACTGCATAAAATGGAATTTGCGGCCCACCG ] [+] EMBL BI808860 [ AACGGGAGGGAACC CAGCCCTACCCCTAATGCCA CAGGAGTCC GCACCACAGGGACACCA GAGCCCCACATGAGAGCTGGACAACCGTA CCCTGCTGACCCATGAGCCGCCGTTGACATGAGTACAGCTGCCACAT GCC GAGCCCCAAG CCCAGGGATTATGAAGACAAT GCAATCATC GGCCTCGCCTAGAGGAAGCGGCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGTATCAGTCTTAAAGTTTATGAATCACATTTAAACCTGTTGGAGATTTTAGTCATATCTATGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATAAGTTGATAGACCATGCCATCTGTTGGTTGTACTCCGAACTGCATAAAATGGAATTTGCGGCCCCCCGCGGTTTCTGGAAAAAAA] consensusID : consensus_11476#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1313 fasta sequence [CGTCTCCTCGGCCGCCGCCGCCGCCGCCGCCGCCGAGCAGAGGCGATCTCCACCCGCGAGCAGCGGCGCCGTCGCCGGTGTGCTGCTTCTCCCGTCGGACCCTCGCCGTTCAAGATGCCTCGCTATGATGACCGTGATCGCTACGATGACCGTTACGGCGGCAACACGAGGCTGTACGTAGGTCGTCTTTCCTCGCGCACCCGGACCCGGGACCTTGAAGACCTTTTCGGCAGATATGGGAGAGTGCGATATGTGGATATGAAGCACGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGAGGCAAGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAAGGGGTTCCACGTGGCCCTGGAGGATCACGTGAATATATGGGCAGAGGACCACCACCTGGTTCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGACTGGAAAAACAGATGCTATCGGTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGAACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTACTCAAGATCCCCATCCCCTCGTCGTGGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGCCGCTCCCAGTCTCCAAGGAGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGGAGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCCCTAGGGGGAGCCCCCGTGACAGTCGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCCCTAGGGGAAGCCCTCGTGATAGCCGCAGCCCTAGGAGAAGTGCTTCACCACCCAACGGGAGGAACCGCAGCCCTACCCCTAATGCCAGCAGGAGTCCTGCACCAAGGGACAGCAGGAGCCCAATGAGAGCTGACAGCCGTAGCCCTGCTGACCATGAGCGCCGTGACATGAGTACAGCTGCCAATGGCCGGAGCCCAAGCCCCAGGGATTATGAAGACAATGGCAATCATCGGGCCTCGCCTAGAGGAAGCGCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGTATCAGTCTTAAAGTTTATGAATCAATTTAAACCTGTTGGAGATTTTAGTCATATCTATGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATAAGTTGATAGACCATGCCATCTGTTGGTTGTACTCCGAACTGCATAAAATGGAATTTGCGGCCCACCG] [+] EMBL AK060171 [CGTCTCCTCGGCCGCCGCCGCCGCCGCCGCCGCCGAGCAGAGGCGATCTCCACCCGCGAGCAGCGGCGCCGTCGCCGGTGTGCTGCTTCTCCCGTCGGACCCTCGCCGTTCAAGATGCCTCGCTATGATGACCGTGATCGCTACGATGACCGTTACGGCGGCAACACGAGGCTGTACGTAGGTCGTCTTTCCTCGCGCACCCGGACCCGGGACCTTGAAGACCTTTTCGGCAGATATGGGAGAGTGCGATATGTGGATATGAAGCACGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGAGGCAAGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAAGGGGTTCCACGTGGCCCTGGAGGATCACGTGAATATATGGGCAGAGGACCACCACCTGGTTCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGACTGGAAAAACAGATGCTATCGGTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGAACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTACTCAAGATCCCCATCCCCTCGTCGTGGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGCCGCTCCCAGTCTCCAAGGAGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGGAGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCCCTAGGGGGAGCCCCCGTGACAGTCGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCCCTAGGGGAAGCCCTCGTGATAGCCGCAGCCCTAGGAGAAGTGCTTCACCACCCAACGGGAGGAACCGCAGCCCTACCCCTAATGCCAGCAGGAGTCCTGCACCAAGGGACAGCAGGAGCCCAATGAGAGCTGACAGCCGTAGCCCTGCTGACCATGAGCGCCGTGACATGAGTACAGCTGCCAATGGCCGGAGCCCAAGCCCCAGGGATTATGAAGACAATGGCAATCATCGGGCCTCGCCTAGAGGAAGCGCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGTATCAGTCTTAAAGTTTATGAATCAATTTAAACCTGTTGGAGATTTTAGTCATATCTATGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATAAGTTGATAGACCATGCCATCTGTTGGTTGTACTCCGAACTGCATAAAATGGAATTTGCGGCCCACCG] [+] EMBL CB677229 [ AAGCTGGAGACTGGAAAAACAGATGCTATCGGTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGAACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTACTCAAGATCCCCATCCCCTCGTCGTGGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGCCGCTCCCAGTCTCCAAGGAGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGGAGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCCCTAGGGGGAGCCCCCGTGACAGTCGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCCCTAGGGGAAGCCCTCGTGATAGCCGCAGCCCTAGGAGAAGTGCTTCACCACCCAACGGGAGGAACCGCAGCCCTACCCCTAATGCCAGCAGGAGTCCTGCACCAAGGGACAGCAGGAGCCCAATGAGAGCTGACAGCCGTAGCCCTGCTGACCATGAGCGCCGTGACATGAGTACAGCTGCCAATGGCCGGAGCCCAAGCCCCAGGGATTATGAAGACAATGGCAATCATCGGGCCTCGCCTAGAGGAAGCGCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGTATCAGTCTTAAAGTTTATGAATCAATTTAAACCTGTTGGAGATTTTAGTCATATCTATGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATAAGTTGATAGACCATGCCATCTGTTGGTTGT ] consensusID : consensus_11476#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1179 fasta sequence [CGCCGCCGCCGCCGCCGAGCAGAGGCGATCTCCACCCGCGAGCAGCGGCGCCGTCGCCGGTGTGCTGCTTCTCCCGTCGGACCCTCGCCGTTCAAGATGCCTCGCTATGATGACCGTGATCGCTACGATGACCGTTACGGCGGCAACACGAGGCTGTACGTAGGTCGTCTTTCCTCGCGCACCCGGACCCGGGACCTTGAAGACCTTTTCGGCAGATATGGGAGAGTGCGATATGTGGATATGAAGCACGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGAGGCAAGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAAGGGGTTCCACGTGGNCCCTGNGAGGGATCACGTGAATATATGGGCAGAGGNACCACCACCTGGTTCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGACTGGAAAAACAGATGCTATCGTTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGAACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTACTCAAGATCCCCATCCCCTCGTCGTGGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGGTATGGAAAGGAGGATATCATTTCCTTGATTTCAACATGGGAATCTCTTACTTATCTTATATGTGATCATTATTAATTTTAGCAGTCATGATCTTCCTATTGAGTCCTGAATGTATGTTGATTCATGTTGATTTTGCTAGGACTGGTTAATTGATTTATACTTGCCAAAAACTAATCTATTGGATGTTAACCCGAAAGTCTCCCGATCACTCTTATAAAACTGAGTTCCTCAGTTGCTTAATCTCTCCCCCTAATCCTCATGTTCTGCTTAATTGGTATCAAACACTGATGGCCTCCTCCATTTCGTTTTGACCACCCGCTCCCCGTTTCCAAGGGAGGGGATCCCCCTAATTACCCGACCCTCCCGGACCCCCCTCCCCACAGTTNCGAGCCCCTAGGGGAACCCCCCCTTCACCTTCCCCCCCCTTGGGGGGACCCCCCCCTCCACCCCTCCCCACCCTTAAGGGGAACCCCTTCCCCACCCCCCANAAGCCCTTATGGGACACCCCCCCCTCAATCCCCANACCC] [+] EMBL AU162167 [CGCCGCCGCCGCCGCCGAGCAGAGGCGATCTCCACCCGCGAGCAGCGGCGCCGTCGCCGGTGTGCTGCTTCTCCCGTCGGACCCTCGCCGTTCAAGATGCCTCGCTATGATGACCGTGATCGCTACGATGACCGTTACGGCGGCAACACGAGGCTGTACGTAGGTCGTCTTTCCTCGCGCACCCGGACCCGGGACCTTGAAGACCTTTTCGGCAGATATGGGAGAGTGCGATATGTGGATATGAAGCACGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGAGGCAAGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAAGGGGTTCCACGTGGNCCCTGNGAGGGATCACGTGAATATATGGGCAGAGGNACCACCACCTGGTTCTGGCCGCTGCTTTAACTGTGG ] [+] EMBL CA753689 [ ggGGGATCACGTGAATATATGGGCAGAGG ACCACCACCTGGTTCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGACTGGAAAAACAGATGCTATCGTTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGAACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTACTCAAGATCCCCATCCCCTCGTCGTGGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGGTATGGAAAGGAGGATATCATTTCCTTGATTTCAACATGGGAATCTCTTACTTATCTTATATGTGATCATTATTAATTTTAGCAGTCATGATCTTCCTATTGAGTCCTGAATGTATGTTGATTCATGTTGATTTTGCTAGGACTGGTTAATTGATTTATACTTGCCAAAAACTAATCTATTGGATGTTAACCCGAAAGTCTCCCGATCACTCTTATAAAACTGAGTTCCTCAGTTGCTTAATCTCTCCCCCTAATCCTCATGTTCTGCTTAATTGGTATCAAACACTGATGGCCTCCTCCATTTCGTTTTGACCACCCGCTCCCCGTTTCCAAGGGAGGGGATCCCCCTAATTACCCGACCCTCCCGGACCCCCCTCCCCACAGTTNCGAGCCCCTAGGGGAACCCCCCCTTCACCTTCCCCCCCCTTGGGGGGACCCCCCCCTCCACCCCTCCCCACCCTTAAGGGGAACCCCTTCCCCACCCCCCANAAGCCCTTATGGGACACCCCCCCCTCAATCCCCANACCC] consensusID : consensus_11476#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 781 fasta sequence [GATGCTATCGGTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGAACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTACTCAAGATCCCCATCCCCTCGTCGTGGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGCCGCTCCCAGTCTCCAAGGAGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGGAGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCCCTAGGGGGAGCCCCCGTGACAGTCGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCCCTAGGGGAAGCCCTCGTGATAGCCGCAGCCCTAGGAGAAGTGCTTCACCACCCAACGGGAGGAACCGCAGCCCTACCCCTAATGCCAGCAGGAGTCCTGCACC-AAGGGACAGCAGGAGCCCAATGAGAGCTGACAGCCGTAGCCCTGCTGACCATGAGCGCCGTGACATGAGTACAGCTGCCAATGGCCGGAGCCCAAGCCCCAGGGATTATGAAGACAATGGCAATCATCGGGCCTCGCCTAGAGGAAGCGCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGTATCAGTCTTAAAGTTTATGAATCAATTTAAACCTGTTGGAGATTTTAGTCATATCTATGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATGAGTTGATAGACCATGCCATCTGTTGGTTGTACTAAAAAAAAGA] [-] EMBL CB677230 [GATGCTATCGGTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGAACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTACTCAAGATCCCCATCCCCTCGTCGTGGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGCCGCTCCCAGTCTCCAAGGAGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGGAGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCCCTAGGGGGAGCCCCCGTGACAGTCGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCCCTAGGGGAAGCCCTCGTGATAGCCGCAGCCCTAGGAGAAGTGCTTCACCACCCAACGGGAGGAACCGCAGCCCTACCCCTAATGCCAGCAGGAGTCCTGCACC AAGGGACAGCAGGAGCCCAATGAGAGCTGACAGCCGTAGCCCTGCTGACCATGAGCGCCGTGACATGAGTACAGCTGCCAATGGCCGGAGCCCAAGCCCCAGGGATTATGAAGACAATGGCAATCATCGGGCCTCGCCTAGAGGAAGCGCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGTATCAGTCTTAAAGTTTATGAATCAATTTAAACCTGTTGGAGATTTTAGTCATATCTATGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATGAGTTGATAGACCATGCCATCTGTTGGTTGTACTAAAAAAAAGA] [+] EMBL C98454 [ nCAGGAGTCATGCACCAAAGGNACAGCAGGAGCCCAATGAGAGCTGACAGCCGTAGCCCTGCTGACCATGAGCGCCGTGACATGAGTANAGCTGCCAATGGCCGGAGCCCAAGCCCCAGGGATTATGAAGACAATGGCAATCATCGGGCCTCGCCTAGAGGAAGCGCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGTATCAGTCTTAAAGTTTATGAATCAATTTAAACCTGTTGGAGATTTTAGTCATATCTATGAACCTGTTGGGATTTGAGTGGAaaaaaa ] consensusID : consensus_11476#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 423 fasta sequence [TATGAAGCATGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGATGCAAGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAAGGGGTTCCACGTGGCCCTGGAGGATCACGTGAATATATGGGCATAGGACCACCACCTGGTTCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGACTGGAAAAACAGATGCTATCGTTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGGAAACAGCCCTTAAGAAATCTCCAAAGCGTTGGGAAAGAAGCTTACTCCAAGAATCCCCCATCCCCCCTCCGTTCCCGTTGGGGGTAAGGAAACCCCGTTGGGTTTGGAACCCTTCCCGGCCAGG] [+] EMBL AA754135 [TATGAAGCATGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGATGCAAGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAAGGGGTTCCACGTGGCCCTGGAGGATCACGTGAATATATGGGCATAGGACCACCACCTGGTTCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGACTGGAAAAACAGATGCTATCGTTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGGAAACAGCCCTTAAGAAATCTCCAAAGCGTTGGGAAAGAAGCTTACTCCAAGAATCCCCCATCCCCCCTCCGTTCCCGTTGGGGGTAAGGAAACCCCGTTGGGTTTGGAACCCTTCCCGGCCAGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11476#0 TAGTCGATCTCCCCGTCGCTTCGGTCTCGACTCCTCGTCTCCTCGGCCGCCGCCGCCGCC 60 consensus_11476#3 ------------------------------------------------------------ consensus_11476#1 ---------------------------------------------CGTCTCCTCGGCCGC 15 consensus_11476#2 ------------------------------------------------------------ consensus_11476#4 ------------------------------------------------------------ consensus_11476#0 GCCGCCGCCGAGCAGAGGCGATCTCCACCCGCGAGCAGCGGCGCCGTCGCCGGTGTGCTG 120 consensus_11476#3 ------------------------------------------------------------ consensus_11476#1 CGCCGCCGCCGCCGCCGCCGAGCAGAGGCGATCTCCACCCGCGAGCAGCGGCGCCGTCGC 75 consensus_11476#2 ------------------------------------------------------------ consensus_11476#4 ------------------------------------------------------------ consensus_11476#0 CTTCTCCCGTCGGACCCTCGCCGGTGAGCACACTTCAAGATGCCTCGCTATGATGACCGT 180 consensus_11476#3 ------------------------------------------------------------ consensus_11476#1 CGGTGTGCTGCTTCTCCCGTCGGACCCTCGCCGTTCAAGATGCCTCGCTATGATGACCGT 135 consensus_11476#2 ------------------------------------------------------------ consensus_11476#4 ------------------------------------------------------------ consensus_11476#0 GATCGCTACGATGACCGTTACGGCGGCAACACGAGGCTGTACGTAGGTCGTCTTTCCTCG 240 consensus_11476#3 ------------------------------------------------------------ consensus_11476#1 GATCGCTACGATGACCGTTACGGCGGCAACACGAGGCTGTACGTAGGTCGTCTTTCCTCG 195 consensus_11476#2 ------------------------------------------------------------ consensus_11476#4 ------------------------------------------------------------ consensus_11476#0 CGCACCCGGACCCGGGACCTTGAAGACCTTTTCGGCAGATATGGGAGAGTGCGATATGTG 300 consensus_11476#3 ------------------------------------------------------------ consensus_11476#1 CGCACCCGGACCCGGGACCTTGAAGACCTTTTCGGCAGATATGGGAGAGTGCGATATGTG 255 consensus_11476#2 ------------------------------------------------------------ consensus_11476#4 ------------------------------------------------------------ consensus_11476#0 GATATGAAGCACGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGAGGCA 360 consensus_11476#3 ------------------------------------------------------------ consensus_11476#1 GATATGAAGCACGAGTTTGCATTTGTTGAATTTAGTGATGCTCGGGATGCTGATGAGGCA 315 consensus_11476#2 ------------------------------------------------------------ consensus_11476#4 ------------------------------------------------------------ consensus_11476#0 AGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAA 420 consensus_11476#3 ------------------------------------------------------------ consensus_11476#1 AGGTACAACCTGGATGGTCGGGACTTTGATGGAAGCCGCATGATTGTTGAGTTTGCTAAA 375 consensus_11476#2 ------------------------------------------------------------ consensus_11476#4 ------------------------------------------------------------ consensus_11476#0 GGGGTTCCACGTGGCCCTGGAGGATCACGTGAATATATGGGCAGAGGACCACCACCTGGT 480 consensus_11476#3 ------------------------------------------------------------ consensus_11476#1 GGGGTTCCACGTGGCCCTGGAGGATCACGTGAATATATGGGCAGAGGACCACCACCTGGT 435 consensus_11476#2 --------------------------------------CGCCGCCGCCGCCGCCGAGCAG 22 consensus_11476#4 ------------------------------------------------------------ consensus_11476#0 TCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGA 540 consensus_11476#3 ------------------------------------------------------------ consensus_11476#1 TCTGGCCGCTGCTTTAACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGA 495 consensus_11476#2 AGGCGATCTCCACCCGCGAGCAGCGGCGCCGTCGCCGGTGTGCTGCTTCTCCCGTCGGAC 82 consensus_11476#4 ------------------------------------------------------------ consensus_11476#0 GACTGGAAAAACAGATGCTATCGGTGTGGAGACAGGGGCCATATAGAGAGGGACTGCCGG 600 consensus_11476#3 -------------GATGCTATCGGTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGG 47 consensus_11476#1 GACTGGAAAAACAGATGCTATCGGTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGG 555 consensus_11476#2 CCTCGCCGTTCAAGATGCC-TCGCTATGATGACCGTGATCGCTACGA---TGACCGTTAC 138 consensus_11476#4 ------------------------------------------------------------ consensus_11476#0 AACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTGCTCAAGATCCCCATCCCCTCGTCGT 660 consensus_11476#3 AACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTACTCAAGATCCCCATCCCCTCGTCGT 107 consensus_11476#1 AACAGCCCTAAGAATCTCAAGCGTGGAAGAAGCTACTCAAGATCCCCATCCCCTCGTCGT 615 consensus_11476#2 GGCGGCAACACGAGGCTGTACGTAGGTCGTCTTTCCTCGCGCACCCGGACCCGGGACCTT 198 consensus_11476#4 ------------------------------------------------------------ consensus_11476#0 GGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTA-GCAGGAGCTACAGCCGCTCCCA 719 consensus_11476#3 GGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTA-GCAGGAGCTACAGCCGCTCCCA 166 consensus_11476#1 GGGAGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTA-GCAGGAGCTACAGCCGCTCCCA 674 consensus_11476#2 GAAGACCTTTTCGGCAGATATGGGAGAGTGCGATATGTGGATATGAAGCACGAGTTTGCA 258 consensus_11476#4 -----------------------------------------TATGAAGCATGAGTTTGCA 19 * ** * * ** consensus_11476#0 GTCTCCAAGG--AGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGG 777 consensus_11476#3 GTCTCCAAGG--AGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGG 224 consensus_11476#1 GTCTCCAAGG--AGGGATAGCCGTAATGAAAGGAGATCAAGGAGCCCTCGTGACAGTCGG 732 consensus_11476#2 TTTGTTGAATTTAGTGATGCTCGGGATGCTGATGAGGCAAGGTACAACCTGGATGGTCGG 318 consensus_11476#4 TTTGTTGAATTTAGTGATGCTCGGGATGCTGATGATGCAAGGTACAACCTGGATGGTCGG 79 * * ** *** ** *** ***** * * ** ***** consensus_11476#0 AGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCC-CTAGGGGGAGCCCCCGTGACAGT-- 834 consensus_11476#3 AGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCC-CTAGGGGGAGCCCCCGTGACAGT-- 281 consensus_11476#1 AGCCCTAGGGGAAGCCCCCGTGACAGTCGCAGCC-CTAGGGGGAGCCCCCGTGACAGT-- 789 consensus_11476#2 GACTTTGATGGAAGCCGC-ATGATTGTTGAGTTTGCTAAAGGGGTTCCACGTGGNCCCTG 377 consensus_11476#4 GACTTTGATGGAAGCCGC-ATGATTGTTGAGTTTGCTAAAGGGGTTCCACGTGGCCC--- 135 * * ******* * *** ** * *** *** ** **** consensus_11476#0 CGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCC--CTAGGGGAAGCCCTCGTGATA 892 consensus_11476#3 CGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCC--CTAGGGGAAGCCCTCGTGATA 339 consensus_11476#1 CGCAGCCCTAAGGGGAGCCCTCGCGACACCCAGAGCC--CTAGGGGAAGCCCTCGTGATA 847 consensus_11476#2 NGAGGGATCACGTGAATATATGGGCAGAGGNACCACCACCTGGTTCTGGCCGCTGCTTTA 437 consensus_11476#4 TGGAGGATCACGTGAATATATGGGCATAGGA-CCACCACCTGGTTCTGGCCGCTGCTTTA 194 * * * * * * * * * * ** ** * *** * ** consensus_11476#0 GCCGCAGCCCTAGGAGA-----AGTGCTTCACCACCCAACGGGAG----GAACCGCAGCC 943 consensus_11476#3 GCCGCAGCCCTAGGAGA-----AGTGCTTCACCACCCAACGGGAG----GAACCGCAGCC 390 consensus_11476#1 GCCGCAGCCCTAGGAGA-----AGTGCTTCACCACCCAACGGGAG----GAACCGCAGCC 898 consensus_11476#2 ACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGACTGGAAAAACAGAT 497 consensus_11476#4 ACTGTGGGATTGATGGGCACTGGGCCCGTGACTGCAAAGCTGGAGACTGGAAAAACAGAT 254 * * * * * * * * ** * * * **** *** *** consensus_11476#0 CTACCCCTAATGCCAGCAGGAGTCCTGCACCAAGGGACAGCAGGAGCCCAATGAG-AGCT 1002 consensus_11476#3 CTACCCCTAATGCCAGCAGGAGTCCTGCACCAAGGGACAGCAGGAGCCCAATGAG-AGCT 449 consensus_11476#1 CTACCCCTAATGCCAGCAGGAGTCCTGCACCAAGGGACAGCAGGAGCCCAATGAG-AGCT 957 consensus_11476#2 GCTATCGTTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGG--AACAGCCCT--AAG 553 consensus_11476#4 GCTATCGTTGTGGAGACAGGGGCCATATAGAAAGGGACTGCCGGGAAACAGCCCTTAAGA 314 * * ** **** * * * * ******* ** ** ** consensus_11476#0 GACAGCCGTAGCCCTGCTGACCATGAGCGCCGTGACATGAGTACAGCTGCCAATGGCCGG 1062 consensus_11476#3 GACAGCCGTAGCCCTGCTGACCATGAGCGCCGTGACATGAGTACAGCTGCCAATGGCCGG 509 consensus_11476#1 GACAGCCGTAGCCCTGCTGACCATGAGCGCCGTGACATGAGTACAGCTGCCAATGGCCGG 1017 consensus_11476#2 AATCTC--AAGCGT---GGAAGAAGCT-ACTC-AAGA--TCCCCATCCCCTCGTCGTGGG 604 consensus_11476#4 AATCTCCAAAGCGTTGGGAAAGAAGCTTACTCCAAGAATCCCCCATCCCCCCTCCGTTCC 374 * * *** * * * * * * ** * * * consensus_11476#0 AGCCCAAGCCCCAGGGATTATGAAGACAATGGCAAT-----CATCGGGCCTCGCCTAGAG 1117 consensus_11476#3 AGCCCAAGCCCCAGGGATTATGAAGACAATGGCAAT-----CATCGGGCCTCGCCTAGAG 564 consensus_11476#1 AGCCCAAGCCCCAGGGATTATGAAGACAATGGCAAT-----CATCGGGCCTCGCCTAGAG 1072 consensus_11476#2 AGGAGCCGTGGTAGGAGCTACAGCAGGAGCCGTAGCAGGAGCTACAGGTATGGAAAGGAG 664 consensus_11476#4 CGTTGG-GGGTAAGGAAACCCCGTTGGGTTTGGAAC---CCTTCCCGGCCAGG------- 423 * * *** * * * ** * consensus_11476#0 GAAGCGCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGT 1177 consensus_11476#3 GAAGCGCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGT 624 consensus_11476#1 GAAGCGCATCCCCTTGAATGAGAGGAAGCACATCCCCTTAAATGAGATGTTAGGGGATGT 1132 consensus_11476#2 GATAT-CATTTCCTTGATTTCAACATGGGAATCTCTTACTTATCTTATATGTGATCAT-T 722 consensus_11476#4 ------------------------------------------------------------ consensus_11476#0 ATCAGTCTTAAAGTTTATGAAT---CAATTTAAACCTGTTGGAGATTTTAGTCATATCTA 1234 consensus_11476#3 ATCAGTCTTAAAGTTTATGAAT---CAATTTAAACCTGTTGGAGATTTTAGTCATATCTA 681 consensus_11476#1 ATCAGTCTTAAAGTTTATGAAT---CAATTTAAACCTGTTGGAGATTTTAGTCATATCTA 1189 consensus_11476#2 ATTAATTTTAGCAGTCATGATCTTCCTATTGAGTCCTGAATGTATGTTGATTCATGT--- 779 consensus_11476#4 ------------------------------------------------------------ consensus_11476#0 TGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATAAGT 1294 consensus_11476#3 TGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATGAGT 741 consensus_11476#1 TGAACCTGTTGGGATTTGAGTGGATCTGTATCCTATTTGTTATTGACGCCTTTCATAAGT 1249 consensus_11476#2 TGATTTTGCTAGGACT--GGTTAAT-TGATTTATACTTGCCAAAAAC-TAATCTATTGGA 835 consensus_11476#4 ------------------------------------------------------------ consensus_11476#0 TGATAGACC--ATGCCATCTGTTGGTTGTACTCCGAACTGCATAAAATGGAATTTGCGGC 1352 consensus_11476#3 TGATAGACC--ATGCCATCTGTTGGTTGTACTAAAAAAAAGA------------------ 781 consensus_11476#1 TGATAGACC--ATGCCATCTGTTGGTTGTACTCCGAACTGCATAAAATGGAATTTGCGGC 1307 consensus_11476#2 TGTTAACCCGAAAGTCTCCCGATCACTCTTATAAAACTGAGTTCCTCAGTTGCTTAATCT 895 consensus_11476#4 ------------------------------------------------------------ consensus_11476#0 CCACCGCGGTTTCTGGAAAAAAA------------------------------------- 1375 consensus_11476#3 ------------------------------------------------------------ consensus_11476#1 CCACCG------------------------------------------------------ 1313 consensus_11476#2 CTCCCCCTAATCCTCATGTTCTGCTTAATTGGTATCAAACACTGATGGCCTCCTCCATTT 955 consensus_11476#4 ------------------------------------------------------------ consensus_11476#0 ------------------------------------------------------------ consensus_11476#3 ------------------------------------------------------------ consensus_11476#1 ------------------------------------------------------------ consensus_11476#2 CGTTTTGACCACCCGCTCCCCGTTTCCAAGGGAGGGGATCCCCCTAATTACCCGACCCTC 1015 consensus_11476#4 ------------------------------------------------------------ consensus_11476#0 ------------------------------------------------------------ consensus_11476#3 ------------------------------------------------------------ consensus_11476#1 ------------------------------------------------------------ consensus_11476#2 CCGGACCCCCCTCCCCACAGTTNCGAGCCCCTAGGGGAACCCCCCCTTCACCTTCCCCCC 1075 consensus_11476#4 ------------------------------------------------------------ consensus_11476#0 ------------------------------------------------------------ consensus_11476#3 ------------------------------------------------------------ consensus_11476#1 ------------------------------------------------------------ consensus_11476#2 CCTTGGGGGGACCCCCCCCTCCACCCCTCCCCACCCTTAAGGGGAACCCCTTCCCCACCC 1135 consensus_11476#4 ------------------------------------------------------------ consensus_11476#0 -------------------------------------------- consensus_11476#3 -------------------------------------------- consensus_11476#1 -------------------------------------------- consensus_11476#2 CCCANAAGCCCTTATGGGACACCCCCCCCTCAATCCCCANACCC 1179 consensus_11476#4 -------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||