These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11477#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2402 fasta sequence [AGAAGGTCTCGAGGAGTCGAGACTTCTCTCCCCCAAATCCCCAGAACCCTAGCGGAGCTCCACCTCGAGATGGCGACGGCGAGCGATGCGCCGGCGAGCTCCACGATAACGACCGCCACGGACGACGCCGAGGTGGAGCGCGACCAGGGCAACGGCAATGGCGCCGTGTCAGCCGCACCCGCCGCCGTGGGGAAGGAGGCGGCGGCTGAGGAGGAGGAGATGATCGGCCCGGCTCCCGTGCCGCCGCGGCCGAGGAAGAAGCGCCCGCTCCAGTTCGAGCAGGCCTTCCTCGACGCCCTGCCCTCCGCGGCCATGTACGAGAAGAGCTATATGCATCGGGATGTCGTCACCCACGTCGCCGTCTCTCCTGCTGACTACTTCATCACCGGGAGCGCAGATGGACATTTGAAATTTTGGAAGAAGAAACCAGCTGGGATCGAATTTGCTAAACATTTTCGATCTCATCTCAGTCCCATTGAAGGCCTAGCTGTGAGTGTTGATGGCCTACTTTGCTGCACGATCTCCAGCGATTGGTCTGTCAAGATATATGACGTTGTGAATTATGACATGATGTTCATGATGCGTCTCCCATTCGTTCCGGGTGCAATTGAGTGGGTTTATCGACAAGGAGATGTTAAACCAAAACTCGCTGTTAGTGATCGTAATACACCTTTTGTTCACATATATGATACTCATTCTGGTTCAAACGATCCCATCATCTCCAAAGAGATTCATGCTGGCCCAGTAAAGGTTATGAAATATAACCATGTTCACGATGTTGTGATATCTGCTGATGCCAAAGGACTCTTGGAATACTGGTCTCCGTCTACCCTCAAATTTCCAGAAGACGCGGTGAACTTTCGTTTAAAAACAGACACAAATCTATTTGAAATCGCAAAATGCAAGACTAGCGTGTCTGCTATTGAGATGAGCAATGACGGCACTCAATTTGTTGTTACATCCCCTGATCGTAGGATACGGGTATTTTGGTTCAAAACTGGGAAACTAAGACGTGTATATGATGAGTCCCTTGAGGTGGCACAAGATCTGCAGAAAAGTGATATCCCGATGTATCGTCTTGATGCTATTGATTTTGGGCGAAGAATGGCTGTTGAGAAGGAAATAGAAAAGACCGAAAATGTTCCACAGCCTAATGCTGTATTTGATGAGAGCAGCAATTTTCTTATTTATGCTACCCTTTTGGGCATAAAGATTATAAATTTGCACACAAATAAGGTTTCAAGAATCCTGGGGAAGGTAGAAAACAATGAACGTTTTCTGAGGATTGCTCTATACCAAGGTGATAAAGGGAATAAGAAGGTTAGAAAAATTCCTTCAGTAGCTGCCAATGTCAATGACAGCAAGGAGCCTTTATCTGACCCAACGCTGCTATGCTGTGCCTTCAAGAAGCATCGAATATATCTCTTTAGTCGTAGAGAACCTGAGGAGCCTGAAGACGCAACCAAGGGTAGGGATGTTTTCAATGAAAAACCCCCACCGGAAGAGCTTTTGGCTGTATCAGATTTAGGGAAGACTGCTACAACATCACTCCCTGATAATTTGGTGATGCATACTTCTATGGGTGATATTCACTTGAGATTATATCCAGAAGAGTGTCCAAAAACTGTGGAGAATTTCACTACCCATTGCCGGAATGGTTATTATGATAATCTCATATTTCATCGTGTGATTAAAGGCTTTATGATTCAGACTGGAGACCCTTTGGGGGATGGCACTGGTGGGCAATCAATCTGGGGAAGGGAGTTCGAAGATGAATTTCACAAAAGCTTGAGACATGATAGGCCTTTTACTCTTTCAATGGCCAATGCTGGACCAAATACCAATGGGTCCCAATTCTTTATCACAACTGTGGCAACTCCATGGCTAGACAACAAACACACAGTGTTT-GGTAGAGTTGTGAAAGGGATGGATGTTGTTCAGCAAATCGAGAAGGTCAAGA-CCGACAA-GAAT-GACAAA--CCATAT---CAGGATG-TGAAGA-TC-TTGAACGTTACA-G-TT-CCAAAGACATAA-GCTCAAAC-AATT-GGT-TTGACATTGTACGCATGAGGTTCTTCCACCC-TTTGC-AAGCCTGTG-AAAGACAAATGTTCTGAACTTTATGTGCTGCTGTGGTGCATCGAGTTGGT-CCTTCAAA-CCTCAA-CCCAGAGGCAGCA-CCATATTATTAG-AAAGCACTGCCTTTGATGAGGTATGTGTTCCGAGTTTTAACTAGCTTT-CCCATCCATAA-CCCAAGGGCAATGGGACTGTAACATTTTTGCTGTACACGGGATTGGTATTGCAATTTAACAATGGAAAAAATGTAACGAGCCAGTTAGATGAGGATACATGGACGATTTTTCCATGCATGGGTGTAAGGGCGTAAGTTTTATTTTGACTAGCCACTGAATGCTGATACC] [+] EMBL AK111654 [AGAAGGTCTCGAGGAGTCGAGACTTCTCTCCCCCAAATCCCCAGAACCCTAGCGGAGCTCCACCTCGAGATGGCGACGGCGAGCGATGCGCCGGCGAGCTCCACGATAACGACCGCCACGGACGACGCCGAGGTGGAGCGCGACCAGGGCAACGGCAATGGCGCCGTGTCAGCCGCACCCGCCGCCGTGGGGAAGGAGGCGGCGGCTGAGGAGGAGGAGATGATCGGCCCGGCTCCCGTGCCGCCGCGGCCGAGGAAGAAGCGCCCGCTCCAGTTCGAGCAGGCCTTCCTCGACGCCCTGCCCTCCGCGGCCATGTACGAGAAGAGCTATATGCATCGGGATGTCGTCACCCACGTCGCCGTCTCTCCTGCTGACTACTTCATCACCGGGAGCGCAGATGGACATTTGAAATTTTGGAAGAAGAAACCAGCTGGGATCGAATTTGCTAAACATTTTCGATCTCATCTCAGTCCCATTGAAGGCCTAGCTGTGAGTGTTGATGGCCTACTTTGCTGCACGATCTCCAGCGATTGGTCTGTCAAGATATATGACGTTGTGAATTATGACATGATGTTCATGATGCGTCTCCCATTCGTTCCGGGTGCAATTGAGTGGGTTTATCGACAAGGAGATGTTAAACCAAAACTCGCTGTTAGTGATCGTAATACACCTTTTGTTCACATATATGATACTCATTCTGGTTCAAACGATCCCATCATCTCCAAAGAGATTCATGCTGGCCCAGTAAAGGTTATGAAATATAACCATGTTCACGATGTTGTGATATCTGCTGATGCCAAAGGACTCTTGGAATACTGGTCTCCGTCTACCCTCAAATTTCCAGAAGACGCGGTGAACTTTCGTTTAAAAACAGACACAAATCTATTTGAAATCGCAAAATGCAAGACTAGCGTGTCTGCTATTGAGATGAGCAATGACGGCACTCAATTTGTTGTTACATCCCCTGATCGTAGGATACGGGTATTTTGGTTCAAAACTGGGAAACTAAGACGTGTATATGATGAGTCCCTTGAGGTGGCACAAGATCTGCAGAAAAGTGATATCCCGATGTATCGTCTTGATGCTATTGATTTTGGGCGAAGAATGGCTGTTGAGAAGGAAATAGAAAAGACCGAAAATGTTCCACAGCCTAATGCTGTATTTGATGAGAGCAGCAATTTTCTTATTTATGCTACCCTTTTGGGCATAAAGATTATAAATTTGCACACAAATAAGGTTTCAAGAATCCTGGGGAAGGTAGAAAACAATGAACGTTTTCTGAGGATTGCTCTATACCAAGGTGATAAAGGGAATAAGAAGGTTAGAAAAATTCCTTCAGTAGCTGCCAATGTCAATGACAGCAAGGAGCCTTTATCTGACCCAACGCTGCTATGCTGTGCCTTCAAGAAGCATCGAATATATCTCTTTAGTCGTAGAGAACCTGAGGAGCCTGAAGACGCAACCAAGGGTAGGGATGTTTTCAATGAAAAACCCCCACCGGAAGAGCTTTTGGCTGTATCAGATTTAGGGAAGACTGCTACAACATCACTCCCTGA TGGTGATGCATACTTCTATGGGTGATATTCACTTGAGATTATATCCAGAAGAGTGTCCAAAAACTGTGGAGAATTTCACTACCCATTGCCGGAATGGTTATTATGACAATCTCATATTTCATCGTGTGATTAAAGGCTTTATGATTCAGACTGGAGACCCTTTGGGGGATGGCACTGGTGGGCAATCAATCTGGGGAAGGGAGTTCGAAGATGAATTTCACAAAAGCTTGAGACATGATAGGCCTTTTACTCTTTCAATGGCCAATGCTGGACCAAATACCAATGGGTCCCAATTCTTTATCACAACTGTGGCAACTCCATGGCTAGACAACAAACACACAGTGTTT GGTAGAGTTGTGAAAGGGATGGATGTTGTTCAGCAAATCGAGAAGGTCAAGA CCGACAA GAAT GACAAA CCATAT CAGGATG TGAAGA TC TTGAACGTTACA G TT CCAAAGACATAA GCTCAAAC AATT GGT TTGACATTGTACGCATGAGGTTCTTCCACCC TTTGC AAGCCTGTG AAAGACAAATGTTCTGAACTTTATGTGCTGCTGTGGTGCATCGAGTTGGT CCTTCAAA CCTCAA CCCAGAGGCAGCA CCATATTATTAG AAAGCACTGCCTTTGATGAGGTATGTGTTCCGAGTTTTAACTAGCTTT CCCATCCATAA CCCAAGGGCAATGGGACTGTAACATTTTTGCTGTACACGGGATTGGTATTGCAATTTAACAATGGAAAAAATGTAACGAGCCAGTTAGATGAGGATACATGGACGATTTTTCCATGCATGGGTGTAAGGGCGTAAGTTTTATTTTGACTAGCCACTGAATGCTGATACC] [+] EMBL AK111941 [ TGGTTCAAACGATCCCATCATCTCCAAAGAGATTCATGCTGGCCCAGTAAAGGTTATGAAATATAACCATGTTCACGATGTTGTGATATCTGCTGATGCCAAAGGACTCTTGGAATACTGGTCTCCGTCTACCCTCAAATTTCCAGAAGACGCGGTGAACTTTCGTTTAAAAACAGACACAAATCTATTTGAAATCGCAAAATGCAAGACTAGCGTGTCTGCTATTGAGATGAGCAATGACGGCACTCAATTTGTTGTTACATCCCCTGATCGTAGGATACGGGTATTTTGGTTCAAAACTGGGAAACTAAGACGTGTATATGATGAGTCCCTTGAGGTGGCACAAGATCTGCAGAAAAGTGATATCCCGATGTACCGTCTTGATGCTATTGATTTTGGGCGAAGAATGGCTGTTGAGAAGGAAATAGAAAAGACCGAAAATGTTCCACAGCCTAATGCTGTATTTGATGAGAGCAGCAATTTTCTTATTTATGCTACCCTTTTGGGCATAAAGATTATAAATTTGCACACAAATAAGGTTTCAAGAATCCTGGGGAAGGTAGAAAACAATGAACGTTTTCTGAGGATTGCTCTATACCAAGGTGATAAAGGGAATAAGAAGGTTAGAAAAATTCCTTCAGTAGCTGCCAATGTCAATGACAGCAAGGAGCCTTTATCTGACCCAACGCTGCTATGCTGTGCCTTCAAGAAGCATCGAATATATCTCTTTAGTCGTAGAGAACCTGAGGAGCCTGAAGACGCAACCAAGGGTAGGGATGTTTTCAATGAAAAACCCCCACCGGAAGAGCTTTTGGCTGTATCAGATTTAGGGAAGACTGCTACAACATCACTCCCTGATAATTTGGTGATGCATACTTCTATGGGTGATATTCACTTGAGATTATATCCAGAAGAGTGTCCAAAAACTGTGGAGAATTTCACTACCCATTGCCGGAATGGTTATTATGATAATCTCATATTTCATCGTGTGATTAAAGGCTTTATGATTCAGACTGGAGACCCTTTGGGGGATGGCACTGGTGGGCAATCAATCTGGGGAAGGGAGTTCGAAGATGAATTTCACAAAAGCTTGAGACATGATAGGCCTTTTACTCTTTCAATGGCCAATGCTGGACCAAATACCAATGGGTCCCAATTCTTTATCACAACTGTGGCAACTCCATGGCTAGACAACAAACACACAGTGTTT GGTAGAGTTGTGAAAGGGATGGATGTTGTTCAGCAAATCGAGAAGGTCAAGA CCGACAA GAAT GACAAA CCATAT CAGGATG TGAAGA TC TTGAACGTTACA G TT CCAAAGACATAA GCTCAAAC AATT GGT TTGACATTGTACGCATGAGGTTCTTCCACCC TTTGC AAGCCTGTG AAAGACAAATGTTCTGAACTTTATGTGCTGCTGTGGTGCATCGAGTTGGT CCTTCAAA CCTCAA CCCAGAGGCAGCA CCATATTATTAG AAAGCACTGCCTTTGATGAGGTATGTGTTCCGAGTTTTAACTAGCTTT CCCATCCATAA CCCAAGGGCAATGGGACTGTAACATTTTTGCTGTACACGGGATTGGTATTGCAATTTAACAATGGAAAAAATGTAACGAGCCAGTTAGATGAGGATACATGGACGAT ] [+] EMBL BP184967 [ acGAGGTTTTCAATGAAAAACCCCCACCGGAAGAGCTTTTGGCTGTATCAGATTTAGGGAAGACTGCTACAACATCACTCCCTGATAATTTGGTGATGCATACTTCTATGGGTGATATTCACTTGAGATTATATCCAGAAGAGTGTCCAAAAACTGTGGAGAATTTCACTACCCATTGCCGGAATGGTTATTATGATAATCTCATATTTCATCGTGTGATTAAAGGCTTTATGATTCAGACTGGAGACCCTTTGGGGGATGGCACTGGTGGGCAATCAATCTGGGGAAGGGAGTTCGAAGATGAATTTCACAAAAGCTTGAGACATGATAGGCCTTTTACTCTTTCAATGGCCAATGCTGGACCAAATACCAATGGGTCCCAATTCTTTATCACAACTGTGGCAACTCCATGGCTAGACAACAAACACACAGTGTTT GGTAGAGTTGTGAAAGGGATGGATGTTGTTCAGCAAATCGAGAAGGTCAAGA CCGACAA GAAT GACAAA CCATAT CAGGATG TGAAGA TC TTGAACGTTACA G TT CCAAAGACATAA ] [+] EMBL CA765315 [ TTTTCAATGAAAAACCCCCACCGGAAGAGCTTTTGGCTGTATCAGATTTAGGGAAGACTGCTACAACATCACTCCCTGATAATTTGGTGATGCATACTTCTATGGGTGATATTCACTTGAGATTATATCCAGAAGAGTGTCCAAAAACTGTGGAGAATTTCACTACCCATTGCCGGAATGGTTATTATGATAATCTCATATTTCATCGTGTGATTAAAGGCTTTATGATTCAGACTGGAGACCCTTTGGGGGATGGCACTGGTGGGCAATCAATCTGGGGAAGGGAGTTCGAAGATGAATTTCACAAAAGCTTGAGACATGATAGGCCTTTTACTCTTTCAATGGCCAATGCTGGACCAAATACCAATGGGTCCCAATTCTTTATCACAACTGTGGCAACTCCATGGCTAGACAACAAACACACAGTGTTT GGTAGAGTTGTGAAAGGGATGGATGTTGTTCAGCAAATCGAGAAGGTCAAGA CCGACAA GAAT GACAAA CCATAT CGGGATG TGAAGA TC TTGAACGTTACA G TT CCAAAGACATAA GCTCAAAC AATT GGT TTGACATTGTACGCATGAGGTTCTTCCACCC TTTGC AAGCCTGTG AAAGACAAATGTTCTGAACTTTATGTGCTGCTGTGGTGCATCGAGTTGGT CCTTCAAA CCTCAA CCCAGAGGCAGCA CCATATTATTAG AAAGCACTGNCTTTGATGANGTATGTGTTCCGAGTTTTAACTAGCTTT NCCATNCATAA CCCAANGGCAATGGGACTGTAACATTTTTGCTGTACACGGGATTGGTATTGCAATTTAACAATGGAAAAAAGGT ACGAGCCAGTTn ] [+] EMBL AB110199 [ AAAAACCCCCACCGGAAGAGCTTTTGGCTGTATCAGATTTAGGGAAGACTGCTACAACATCACTCCCTGATAATTTGGTGATGCATACTTCTATGGGTGATATTCACTTGAGATTATATCCAGAAGAGTGTCCAAAAACTGTGGAGAATTTCACTACCCATTGCCGGAATGGTTATTATGATAATCTCATATTTCATCGTGTGATTAAAGGCTTTATGATTCAGACTGGAGACCCTTTGGGGGATGGCACTGGTGGGCAATCAATCTGGGGAAGGGAGTTCGAAGATGAATTTCACAAAAGCTTGAGACATGATAGGCCTTTTACTCTTTCAATGGCCAATGCTGGACCAAATACCAATGGGTCCCAATTCTTTATCACAACTGTGGCAACTCCATGGCTAGACAACAAACACACAGTGTTT GGTAGAGTTGTGAAAGGGATGGATGTTGTTCAGCAAATCGAGAAGGTCAAGA CCGACAA GAAT GACAAA CCATAT CAGGATG TGAAGA TC TTGAACGTTACA G TT CCAAAGACATAA GCTCAAAC AATT GGT TTGACATTGTACGCATGAGGTTCTTCCACCC TTTGC AAGCCTGTG AAAGACAAATGTTCTGAACTTTATGTGCTGCTGTGGTGCATCGAGTTGGT CCTTCAAA CCTCAA CCCAGAGGCAGCA CCATATTATTAG AAAGCACTGCCTTTGATGAGGTATGTGTTCCGAGTTTTAACTAGCTTT CCCATCCATAA CCCAAGGGCAATGGGACTGTAACATTTTTGCTGTACACGGGATTGGTATTGCAATTTAACAATGGAAAAAATGTAACGAGCCAGTTAG ] [+] EMBL AU066135 [ CATATTTCATCGTGTGATTAAAGGCTTTATGATTCAGACTGGAGACCCTTTGGGGGATGGCACTGGTGGGCAATCAATCTGGGGAAGGGAGTTCGAAGATGAATTTCACAAAAGCTTGAGACATGATAGGCCTTTTACTCTTTCAATGGCCAATGCTGGACCAAATACCAATGGGTCCCAATTCTTTATCACAACTGTGGCAACTCCATGGCTAGACAACAAACACACAGTGTTT NGTAGAGTTGTGAAAGGGATGGATGTTGTTCAGCAAATCGAGAAGGTCAAGA CCGACAA GAAT NACAAA CCATAT CAGGATG TGAAGA TC TTGAACGNTACA GTTT CCAAAGACATAA GCTCAAAC AATTNGGT TT ] [+] EMBL AU066340 [ CATATTTCATCGTGTGATTAAAGGCTTTATGATTCAGACTGGAGACCCTTTGGGGGATGGCACTGGTGGGCAATCAATCTGGGGAAGGGAGTTCGAAGATGAATTTCACAAAAGCTTGAGACATGATAGGCCTTTTACTCTTTCAATGGCCAATGCTGGACCAAATACCAATGGGTCCCAATTCTTTATCACAACTGTGGCAACTCCATGGCTAGACAACAAACACACAGTGTTTGGGTAGAGTTGTGAAAGGGATGGATGTTGTTCAGCAAATCGNGAAGGTCAAGACCCGACAA GAAT GACAAA CCATAT CAGGATG TGAAGA TCTTTGAACGTTACA G TT CCAAAGACATAA GCTCAAAC ] [+] EMBL AU223470 [ TGTGAAAGGGATGGATGTTGTTCAGCAAATCGAGAAGGTCAAGN CCGGCAA GAAT GNCAAAC CCATAT CAGGATG TGAAGA TC TTGAACGTTACA G TT CCAAAGACATAA GCTCAAAC AATT GGT TTGACATTGTACGCATGAGGTTCTTCCACCC TTTGCAAAGCCTGTG AAAGACAAATGTTCTGAACTTTATGTGCTGCTGTGGTGCATCGAGTTGGTCCCTTCAAACCCTCAACCCCAGAGGCAGCACCCATATTATTAGAAAAGCACTGCCTTTGATGAGGTATGTGTTCCGAGTTTTAACTAGCTTTCCCCATCCATAACCCCAAGGGCAATGGGACTGTAACATTTTTGCTGTACACGGGATTGGTATTGCAATTTAACAATGGAAAAAATGTAACGAGCCAGTTAGATGAGGATAaaaaaaa ] [+] EMBL AU102015 [ CAAGGAATGGCCAAANCCCATATATCCAGGATGTTGAAGANTCTTTGAACGTTACAGG TTCCCAAAGACATAAGGCTCAAACAAATT GGTNTTGACATTGTACGCATGAGGTTCTTCCACCCTTTTGC AAGCCTGTGAAAAGACAAATGTTCTGAACTTTATGTGCTGCTGTGGTGCATCGAGTTGGT CCTTCAAA CCTCAA CCCAGAGGCAGCA CCATATTATTAG AAAGCACTGCCTTTGATGAGGTATGTGTTCCGAGTTTTAACTAGCTTT CCCATCCATAA CCCAAGGGCAATGGGACTGTAACATTTTTGCTGTACACGGGATTGGTATTGCAATTTAACAATGGAAAAAATGTAACGAGCCAGTTAGATGAGGATAaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||