These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11487#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2873 fasta sequence [TCGTCTCTCTGCTCTGCTCGTCGACTGCCACCACCAGTCCACCACCACCTTCGGCTGATACAAGAAGCGAGGGGGAGGTAGGAGAGAAGCCCACCACAGGGTGACCCCATCGGCCATCGCGACATCTTCTTCTTCTTGCTCGCTTGCAATTTGACGCCGCGAGGGCGGGTGGTTTCGTGGCCATGGCGGTCTCCGGTGCGGCGCATTGAGCCCAGCGTGCGAGGGGGCATGGATCTGGAGGCCGCGCATGGCGCGGCTGCGGCGCCAGGGAAGAGGAGGAGGAGGGCGAGGGAGTCATGGGGAGCGTCGCTGCTGCTCGCGTACCAGAGCCTCGGGGTGGTGTACGGCGACGTGGCCACGTCGCCGCTGTACGTGTACAAGAGCGCCTTCGCCGGCGACGACATCCAGCACTCGGCGGGGAACGAGGAGATCTACGGCGTGCTGTCCTTCGTGTTCTGGACGCTGACCCTCATCTCGCTCGTCAAGTACGTGCTCATCGTGCTCCGCGCCGACGACGGCGGCGAGGGCGGCACGTTCGCGCTCTACTCCCTCATCTGCCGCCACGTCCGCGCGGGCCTGCTTCCCGGCGGCGCCGGCGACGAGCTCGCCGTGGGAGGGCGTCGTGACGCCCGGGCCATGTCGAGGCTGAGGGCGATGCTGGAGAGGTACAGGGTGCTGCAGAGGCTGCTGCTCCTGTTCGCGCTGCTCGGGACGTGTATGGTCATCGGGGACGGCGTGCTCACCCCTGCGGTCTCTGTGTACTCTGCGGTCTCTGGGCTTGAGTTGTCAATGGAGCATGAGCATCACAAATACGTACAACTTCCTGTGACGTGTGCCATACTTATAGGCTTGTTTGCGCTGCAACACTATGGTACACACAGAGTTGGATTTATCTTTGCCCCAATTGTCTGCGTCTGGCTTCTCTGCATAAGTGCTATAGGGGTTTACAACATTGTTCACTGGAACCACCATGTGTACCGAGCCCTCTCACCATACTACATGTATCAGTTTCTCAAGAAGACCCAAACAGGTGGTTGGATGTCACTGGGTGGAATTCTTCTATGTGTAACAGGTTCGGAAGCTATGTATGCAGATCTTGGACATTTCTCACAATCGTCAATTAAGATTGCGTTCATGTCTGTGGTTTATCCAGCTCTAGTTCTTGCTTACATGGGGCAGGCTGCTTATATCTCACAACACCACAGCTTTGAGAATGCTTATCATATTGGATTCTATGTGTCAGTACCAGAAAAACTTAGATGGCCTGTTCTGGTGATTGCTATACTAGCAGCTGTGGTTGGGAGCCAAGCAGTCATTACTGGCACCTTTTCAATTATCAAGCAGTGCTCTTCATTAAGTTGCTTCCCTGGCGTGAAAATTGTGCACACATCATCTACAGTACACGGTCAGATATACATACCTGAAATCAATTGGATCCTGATGATACTCTGCCTGGCTGTTACTCTTGGCTTCAGAAACACGAAACATTTGGCAAATGCACAAGGTCTGGCAGTTATAACTGTTATGCTTGTTACCACTTGTTTAATGTCACTGGTCATTGTGCTTTGCTGGAACAAAAGTATCTTCCTTGCGCTCGGTTTCCTGATTTTCTTTGGCACAATCGAAGTACTCTACTTCTCAGCTTCCCTTGTCAAGTTTCATGAAGGCGCATGGGTCCCAATTACCCTCTCCTTTATATTTATGATAGTCATGTGCGTGTGGCATTATGGCACTATAAAGAAGTATGAGTTCGATTTCCAAAACAAGGTTTCAGTAAACTGGCTCTTGAACCTTGGTCCTTCATTGGGGATTGTCCGTGTTCGAGGCATTGGACTGATACATACAGAACTGGTATCTGGAATTCCAGCCATCTTCTCCCACTTCGTCACTAATCTGCCTGCATTTCACCAGGTACTGGTTTTTCTGTGTGTTAAATCAGTTCCAGTGCCACATGTTCAACCTGAAGAACGGTTTCTAGTGGGTCGCATTGGTCCAAAAGAGTACAGGCTATACAGGGTCATCGTGAGGTATGGGTACCGTGATGTGCAGAAGGATGACATAGAGTTTGAAAAGGACCTAGTCAGCAGCATTGCAGAGTTCATCCGCAGTGGGGATTCTCACCACAACGGTGTTTTGGAGGACACAGACAAGTCGTGTGAGAAACTGTCTTCCATCAGTAATGGTATTCCATTGTGGATGGAGGATGGAGAGGTCGATGCTTCAGCATCCCCTCATAAGGAGACAGATACACAGATCATATCACCAAACCGAAAGAAAGCAAGGTTCGTGCTGCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAGCTCATGGATGCAAGGGAGGCTGGAATGTCCTTCATCTTAGGACACTCCTACATGAAGGCGAAGAGCGGGTCTAGTTTCATAAAGCGAATCGTGATAAACTTCTTCTACGAGTTCTTGAGGAGAAACAGCCGCGGACCATCTTATGCTGCTACCATACCTCATGCCTCCACACTGGAGGTGGGAATGGTCTACCAAGTCTGATAGTAGCAGCAGCTGTATAAAGCTAGAGATGAGATCTCCATCTGTACATATCACTTCATGCCGACACCGCTAACCTGAAGGTGGCAGTTGATGTTGGAGCACCTCATGGCCAGCCAGCCAGTTGCAAATCTTGGGAGAGCCAACAGGGAGTGTGCATTTTTGTCTGTAAAGCCTTCTGTTGAGCTGCTCCGTGTTGTTTTTTCCCTTGTGAAGAAACCTTTCGCTGTTGTGGATACCACTGCGAAACTGGGGAAGTGTAAGTCTGTAAGAGTGACCAGCAAATGATAGCATTTTTGTTGCTTTAGCAACTTGGTAACTTGTCTAAAATGGCA] [+] EMBL AK111629 [TCGTCTCTCTGCTCTGCTCGTCGACTGCCACCACCAGTCCACCACCACCTTCGGCTGATACAAGAAGCGAGGGGGAGGTAGGAGAGAAGCCCACCACAGGGTGACCCCATCGGCCATCGCGACATCTTCTTCTTCTTGCTCGCTTGCAATTTGACGCCGCGAGGGCGGGTGGTTTCGTGGCCATGGCGGTCTCCGGTGCGGCGCATTGAGCCCAGCGTGCGAGGGGGCATGGATCTGGAGGCCGCGCATGGCGCGGCTGCGGCGCCAGGGAAGAGGAGGAGGAGGGCGAGGGAGTCATGGGGAGCGTCGCTGCTGCTCGCGTACCAGAGCCTCGGGGTGGTGTACGGCGACGTGGCCACGTCGCCGCTGTACGTGTACAAGAGCGCCTTCGCCGGCGACGACATCCAGCACTCGGCGGGGAACGAGGAGATCTACGGCGTGCTGTCCTTCGTGTTCTGGACGCTGACCCTCATCTCGCTCGTCAAGTACGTGCTCATCGTGCTCCGCGCCGACGACGGCGGCGAGGGCGGCACGTTCGCGCTCTACTCCCTCATCTGCCGCCACGTCCGCGCGGGCCTGCTTCCCGGCGGCGCCGGCGACGAGCTCGCCGTGGGAGGGCGTCGTGACGCCCGGGCCATGTCGAGGCTGAGGGCGATGCTGGAGAGGTACAGGGTGCTGCAGAGGCTGCTGCTCCTGTTCGCGCTGCTCGGGACGTGTATGGTCATCGGGGACGGCGTGCTCACCCCTGCGGTCTCTGTGTACTCTGCGGTCTCTGGGCTTGAGTTGTCAATGGAGCATGAGCATCACAAATACGTACAACTTCCTGTGACGTGTGCCATACTTATAGGCTTGTTTGCGCTGCAACACTATGGTACACACAGAGTTGGATTTATCTTTGCCCCAATTGTCTGCGTCTGGCTTCTCTGCATAAGTGCTATAGGGGTTTACAACATTGTTCACTGGAACCACCATGTGTACCGAGCCCTCTCACCATACTACATGTATCAGTTTCTCAAGAAGACCCAAACAGGTGGTTGGATGTCACTGGGTGGAATTCTTCTATGTGTAACAGGTTCGGAAGCTATGTATGCAGATCTTGGACATTTCTCACAATCGTCAATTAAGATTGCGTTCATGTCTGTGGTTTATCCAGCTCTAGTTCTTGCTTACATGGGGCAGGCTGCTTATATCTCACAACACCACAGCTTTGAGAATGCTTATCATATTGGATTCTATGTGTCAGTACCAGAAAAACTTAGATGGCCTGTTCTGGTGATTGCTATACTAGCAGCTGTGGTTGGGAGCCAAGCAGTCATTACTGGCACCTTTTCAATTATCAAGCAGTGCTCTTCATTAAGTTGCTTCCCTGGCGTGAAAATTGTGCACACATCATCTACAGTACACGGTCAGATATACATACCTGAAATCAATTGGATCCTGATGATACTCTGCCTGGCTGTTACTCTTGGCTTCAGAAACACGAAACATTTGGCAAATGCACAAGGTCTGGCAGTTATAACTGTTATGCTTGTTACCACTTGTTTAATGTCACTGGTCATTGTGCTTTGCTGGAACAAAAGTATCTTCCTTGCGCTCGGTTTCCTGATTTTCTTTGGCACAATCGAAGTACTCTACTTCTCAGCTTCCCTTGTCAAGTTTCATGAAGGCGCATGGGTCCCAATTACCCTCTCCTTTATATTTATGATAGTCATGTGCGTGTGGCATTATGGCACTATAAAGAAGTATGAGTTCGATTTCCAAAACAAGGTTTCAGTAAACTGGCTCTTGAACCTTGGTCCTTCATTGGGGATTGTCCGTGTTCGAGGCATTGGACTGATACATACAGAACTGGTATCTGGAATTCCAGCCATCTTCTCCCACTTCGTCACTAATCTGCCTGCATTTCACCAGGTACTGGTTTTTCTGTGTGTTAAATCAGTTCCAGTGCCACATGTTCAACCTGAAGAACGGTTTCTAGTGGGTCGCATTGGTCCAAAAGAGTACAGGCTATACAGGGTCATCGTGAGGTATGGGTACCGTGATGTGCAGAAGGATGACATAGAGTTTGAAAAGGACCTAGTCAGCAGCATTGCAGAGTTCATCCGCAGTGGGGATTCTCACCACAACGGTGTTTTGGAGGACACAGACAAGTCGTGTGAGAAACTGTCTTCCATCAGTAATGGTATTCCATTGTGGATGGAGGATGGAGAGGTCGATGCTTCAGCATCCCCTCATAAGGAGACAGATACACAGATCATATCACCAAACCGAAAGAAAGCAAGGTTCGTGCTGCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAGCTCATGGATGCAAGGGAGGCTGGAATGTCCTTCATCTTAGGACACTCCTACATGAAGGCGAAGAGCGGGTCTAGTTTCATAAAGCGAATCGTGATAAACTTCTTCTACGAGTTCTTGAGGAGAAACAGCCGCGGACCATCTTATGCTGCTACCATACCTCATGCCTCCACACTGGAGGTGGGAATGGTCTACCAAGTCTGATAGTAGCAGCAGCTGTATAAAGCTAGAGATGAGATCTCCATCTGTACATATCACTTCATGCCGACACCGCTAACCTGAAGGTGGCAGTTGATGTTGGAGCACCTCATGGCCAGCCAGCCAGTTGCAAATCTTGGGAGAGCCAACAGGGAGTGTGCATTTTTGTCTGTAAAGCCTTCTGTTGAGCTGCTCCGTGTTGTTTTTTCCCTTGTGAAGAAACCTTTCGCTGTTGTGGATACCACTGCGAAACTGGGGAAGTGTAAGTCTGTAAGAGTGACCAGCAAATGATAGCATTTTTGTTGCTTTAGCAACTTGGTAACTTGTCTAAAATGGCA] [+] EMBL AK098897 [ TCTCTGCTCTGCTCGTCGACTGCCACCACCAGTCCACCACCACCTTCGGCTGATACAAGAAGCGAGGGGGAGGTAGGAGAGAAGCCCACCACAGGGTGACCCCATCGGCCATCGCGACATCTTCTTCTTCTTGCTCGCTTGCAATTTGACGCCGCGAGGGCGGGTGGTTTCGTGGCCATGGCGGTCTCCGGTGCGGCGCATTGAGCCCAGCGTGCGAGGGGGCATGGATCTGGAGGCCGCGCATGGCGCGGCTGCGGCGCCAGGGAAGAGGAGGAGGAGGGCGAGGGAGTCATGGGGAGCGTCGCTGCTGCTCGCGTACCAGAGCCTCGGGGTGGTGTACGGCGACGTGGCCACGTCGCCGCTGTACGTGTACAAGAGCGCCTTCGCCGGCGACGACATCCAGCACTCGGCGGGGAACGAGGAGATCTACGGCGTGCTGTCCTTCGTGTTCTGGACGCTGACCCTCATCTCGCTCGTCAAGTACGTGCTCATCGTGCTCCGCGCCGACGACGGCGGCGAGGGCGGCACGTTCGCGCTCTACTCCCTCATCTGCCGCCACGTCCGCGCGGGCCTGCTTCCCGGCGGCGCCGGCGACGAGCTCGCCGTGGGAGGGCGTCGTGACGCCCGGGCCATGTCGAGGCTGAGGGCGATGCTGGGGAGGTACAGGGTGCTGCAGAGGCTGCTGCTCCTGTTCGCGCTGCTCGGGACGTGTATGGTCATCGGGGACGGCGTGCTCACCCCTGCGGTCTCTGTGTACTCTGCGGTCTCTGGGCTTGAGTTGTCAATGGAGCATGAGCATCACAAATACGTACAACTTCCTGTGACGTGTGCCATACTTATAGGCTTGTTTGCGCTGCAACACTATGGTACACACAGAGTTGGATTTATCTTTGCCCCAATTGTCTGCGTCTGGCTTCTCTGCATAAGTGCTATAGGGGTTTACAACATTGTTCACTGGAACCACCATGTGTACCGAGCCCTCTCACCATACTACATGTATCAGTTTCTCAAGAAGACCCAAACAGGTGGTTGGATGTCACTGGGTGGAATTCTTCTATGTGTAACAGGTTCGGAAGCTATGTATGCAGATCTTGGACATTTCTCACAATCGTCAATTAAGATTGCGTTCATGTCTGTGGTTTATCCAGCTCTAGTTCTTGCTTACATGGGGCAGGCTGCTTATATCTCACAACACCACAGCTTTGAGAATGCTTATCATATTGGATTCTATGTGTCAGTACCAGAAAAACTTAGATGGCCTGTTCTGGTGATTGCTATACTAGCAGCTGTGGTTGGGAGCCAAGCAGTCATTACTGGCACCTTTTCAATTATCAAGCAGTGCTCTTCATTAAGTTGCTTCCCTGGCGTGAAAATTGTGCACACATCATCTACAGTACACGGTCAGATATACATACCTGAAATCAATTGGATCCTGATGATACTCTGCCTGGCTGTTACTCTTGGCTTCAGAAACACGAAACATTTGGCAAATGCACAAGGTCTGGCAGTTATAACTGTTATGCTTGTTACCACTTGTTTAATGTCACTGGTCATTGTGCTTTGCTGGAACAAAAGTATCTTCCTTGCGCTCGGTTTCCTGATTTTCTTTGGCACAATCGAAGTACTCTACTTCTCAGCTTCCCTTGTCAAGTTTCATGAAGGCGCATGGGTCCCAATTACCCTCTCCTTTATATTTATGATAGTCATGTGCGTGTGGCATTATGGCACTATAAAGAAGTATGAGTTCGATTTCCAAAACAAGGTTTCAGTAAACTGGCTCTTGAACCTTGGTCCTTCATTGGGGATTGTCCGTGTTCGAGGCATTGGACTGATACATACAGAACTGGTATCTGGAATTCCAGCCATCTTCTCCCACTTCGTCACTAATCTGCCTGCATTTCACCAGGTACTGGTTTTTCTGTGTGTTAAATCAGTTCCAGTGCCACATGTTCAACCTGAAGAACGGTTTCTAGTGGGTCGCATTGGTCCAAAAGAGTACAGGCTATACAGGGTCATCGTGAGGTATGGGTACCGTGATGTGCAGAAGGATGACATAGAGTTTGAAAAGGACCTAGTCAGCAGCATTGCAGAGTTCATCCGCAGTGGGGATTCTCACCACAACGGTGTTTTGGAGGACACAGACAAGTCGTGTGAGAAACTGTCTTCCATCAGTAATGGTATTCCATTGTGGATGGAGGATGGAGAGGTCGATGCTTCAGCATCCCCTCATAAGGAGACAGATACACAGATCATATCACCAAACCGAAAGAAAGCAAGGTTCGTGCTGCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAGCTCATGGATGCAAGGGAGGCTGGAATGTCCTTCATCTTAGGACACTCCTACATGAAGGCGAAGAGCGGGTCTAGTTTCATAAAGCGAATCGTGATAAACTTCTTCTACGAGTTCTTGAGGAGAAACAGCCGCGGACCATCTTATGCTGCTACCATACCTCATGCCTCCACACTGGAGGTGGGAATGGTCTACCAAGTCTGATAGTAGCAGCAGCTGTATAAAGCTAGAGATGAGATCTCCATCTGTACATATCACTTCATGCCGACACCGCTAACCTGAAGGTGGCAGTTGATGTTGGAGCACCTCATGGCCAGCCAGCCAGTTGCAAATCTTGGGAGAGCCAACAGGGAGTGTGCATTTTTGTCTGTAAAGCCTTCTGTTGAGCTGCTCCGTGTTGTTTTTTCCCTTGTGAAGAAACCTTTCGCTGTTGTGGATACCACTGCGAAACTGGGGAAGTGTAAGTCTGTAAGAGTGACCAGCAAATGATAGCATTT ] [+] EMBL CB640667 [ ATCTTTGCCCCAATTGTCTGCGTCTGGCTTCTCTGCATAAGTGCTATAGGGGTTTACAACATTGTTCACTGGAACCACCATGTGTACCGAGCCCTCTCACCATACTACATGTATCAGTTTCTCAAGAAGACCCAAACAGGTGGTTGGATGTCACTGGGTGGAATTCTTCTATGTGTAACAGGTTCGGAAGCTATGTATGCAGATCTTGGACATTTCTCACAATCGTCAATTAAGATTGCGTTCATGTCTGTGGTTTATCCAGCTCTAGTTCTTGCTTACATGGGGCAGGCTGCTTATATCTCACAACACCACAGCTTTGAGAATGCTTATCATATTGGATTCTATGTGTCAGTACCAGAAAAACTTAGATGGCCTGTTCTGGTGATTGCTATACTAGCAGCTGTGGTTGGGAGCCAAGCAGTCATTACTGGCACCTTTTCAATTATCAAGCAGTGCTCTTCATTAAGTTGCTTCCCTGGCGTGAAAATTGTGCACACATCATCTACAGTACACGGTCAGATATACATACCTGAAATCAATTGGATCCTGATGATACTCTGCCTGGCTGTTAC ] [+] EMBL CB650728 [ ATACCTGAAATCAATTGGATCCTGATGATACTCTGCCTGGCTGTTACTCTTGGCTTCAGAAACACGAAACATTTGGCAAATGCACAAGGTCTGGCAGTTATAACTGTTATGCTTGTTACCACTTGTTTAATGTCACTGGTCATTGTGCTTTGCTGGAACAAAAGTATCTTCCTTGCGCTCGGTTTCCTGATTTTCTTTGGCACAATCGAAGTACTCTACTTCTCAGCTTCCCTTGTCAAGTTTCATGAAGGCGCATGGGTCCCAATTACCCTCTCCTTTATATTTATGATAGTCATGTGCGTGTGGCATTATGGCACTATAAAGAAGTATGAGTTCGATTTCCAAAACAAGGTTTCAGTAAACTGGCTCTTGAACCTTGGTCCTTCATTGGGGATTGTCCGTGTTCGAGGCATTGGACTGATACATACAGAACTGGTATCTGGAATTCCAGCCATCTTCTCCCACTTCGTCACTAATCTGCCTGCATTTCACCAGGTACTGGTTTTTCTGTGTGTTAAATCAGTTCCAGTGCCACATGTTCAACCTGAAGAACGGTTTCTAGTGGGTCGCATTGGTCCAAAAGAGTACAGGCTATACAGGGTCATCGTGAGGTATGGGTACCGTGATGTGCAGAAGGATGACATAGAGTTTGAAAAGGACCTAGTCAGCAGCATTGCAGAGTTCATCCGCAGTGGGGATTCTCACCACAACGGTGTTTTGGAGGACACAGACAAGTCGTGTGAGAAACTGTCTTCCATCAGTAATGGTATTC ] [+] EMBL AK112036 [ ACTCTTGGCTTCAGAAACACGAAACATTTGGCAAATGCACAAGGTCTGGCAGTTATAACTGTTATGCTTGTTACCACTTGTTTAATGTCACTGGTCATTGTGCTTTGCTGGAACAAAAGTATCTTCCTTGCGCTCGGTTTCCTGATTTTCTTTGGCACAATCGAAGTACTCTACTTCTCAGCTTCCCTTGTCAAGTTTCATGAAGGCGCATGGGTCCCAATTACCCTCTCCTTTATATTTATGATAGTCATGTGCGTGTGGCATTATGGCACTATAAAGAAGTATGAGTTCGATTTCCAAAACAAGGTTTCAGTAAACTGGCTCTTGAACCTTGGTCCTTCATTGGGGATTGTCCGTGTTCGAGGCATTGGACTGATACATACAGAACTGGTATCTGGAATTCCAGCCATCTTCTCCCACTTCGTCACTAATCTGCCTGCATTTCACCAGGTACTGGTTTTTCTGTGTGTTAAATCAGTTCCAGTGCCACATGTTCAACCTGAAGAACGGTTTCTAGTGGGTCGCATTGGTCCAAAAGAGTACAGGCTATACAGGGTCATCGTGAGGTATGGGTACCGTGATGTGCAGAAGGATGACATAGAGTTTGAAAAGGACCTAGTCAGCAGCATTGCAGAGTTCATCCGCAGTGGGGATTCTCACCACAACGGTGTTTTGGAGGACACAGACAAGTCGTGTGAGAAACTGTCTTCCATCAGTAATGGTATTCCATTGTGGATGGAGGATGGAGAGGTCGATGCTTCAGCATCCCCTCATAAGGAGACAGATACACAGATCATATCACCAAACCGAAAGAAAGCAAGGTTCGTGCTGCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAGCTCATGGATGCAAGGGAGGCTGGAATGTCCTTCATCTTAGGACACTCCTACATGAAGGCGAAGAGCGGGTCTAGTTTCATAAAGCGAATCGTGATAAACTTCTTCTACGAGTTCTTGAGGAGAAACAGCCGCGGACCATCTTATGCTGCTACCATACCTCATGCCTCCACACTGGAGGTGGGAATGGTCTACCAAGTCTGATAGTAGCAGCAGCTGTATAAAGCTAGAGATGAGATCTCCATCTGTACATATCACTTCATGCCGACACCGCTAACCTGAAGGTGGCAGTTGATGTTGGAGCACCTCATGGCCAGCCAGCCAGTTGCAAATCTTGGGAGAGCCAACAGGGAGTGTGCATTTTTGTCTGTAAAGCCTTCTGTTGAGCTGCTCCGTGTTGTTTTTTCCCTTGTGAAGAAACCTTTCGCTGTTGTGGATACCACTGCGAAACTGGGGAAGTGTAAGTCTGTAAGAGTGACCAGCAAATGATAGCATTTTTG ] [+] EMBL CB631488 [ AAGTACTCTACTTCTCAGCTTCCCTTGTCAAGTTTCATGAAGGCGCATGGGTCCCAATTACCCTCTCCTTTATATTTATGATAGTCATGTGCGTGTGGCATTATGGCACTATAAAGAAGTATGAGTTCGATTTCCAAAACAAGGTTTCAGTAAACTGGCTCTTGAACCTTGGTCCTTCATTGGGGATTGTCCGTGTTCGAGGCATTGGACTGATACATACAGAACTGGTATCTGGAATTCCAGCCATCTTCTCCCACTTCGTCACTAATCTGCCTGCATTTCACCAGGTACTGGTTTTTCTGTGTGTTAAATCAGTTCCAGTGCCACATGTTCAACCTGAAGAACGGTTTCTAGTGGGTCGCATTGGTCCAAAAGAGTACAGGCTATACAGGGTCATCGTGAGGTATGGGTACCGTGATGTGCAGAAGGATGACATAGAGTTTGAAAAGGACCTAGTCAGCAGCATTGCAGAGTTCATCCGCAGTGGGGATTCTCACCACAACGGTGTTTTGGAGGACACAGACAAGTCGTGTGAGAAACTGTCTTCCATCAGTAATGGTATTCCATTGTGGATGGAGGATGGAGAGGTCGATGCTTCAGCATCCCCTCATAAGGAGACAGATACACAGATCATATCACCAAACCGAAAGAAAGCAAGGTTCGTGCTGCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAGCTCATGGATGCAAGGGAGGCTGGAATGTCCTTCATCTTANGAC ] [-] EMBL CB631489 [ ACCGTGATGTGCAGAAGGATGACATAGAGTTTGAAAAGGACCTAGTCAGCAGCATTGCAGAGTTCATCCGCAGTGGGGATTCTCACCACAACGGTGTTTTGGAGGACACAGACAAGTCGTGTGAGAAACTGTCTTCCATCAGTAATGGTATTCCATTGTGGATGGAGGATGGAGAGGTCGATGCTTCAGCATCCCCTCATAAGGAGACAGATACACAGATCATATCACCAAACCGAAAGAAAGCAAGGTTCGTGCTGCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAGCTCATGGATGCAAGGGAGGCTGGAATGTCCTTCATCTTAGGACACTCCTACATGAAGGCGAAGAGCGGGTCTAGTTTCATAAAGCGAATCGTGATAAACTTCTTTTACGAGTTCTTGAGGAGAAACAGCCGCGGACCATCTTATGCTGCTACCATACCTCATGCCTCCACACTGGAGGTGGGAATGGTCTACCAAGTCTGATAGTAGCAGCAGCTGTATAAAGCTAGAGATGAGATCTCCATCTGTACATATCACTTCATGCCGACACCGCTAACCTGAAGGTGGCAGTTGATGTTGGAGCACCTCATGGCCAGCCAGCCAGTTGCAAATCTTGGGAGAGCCAACAGGGAGTGTGCATTTTTGTCTGTAAAGCCTTCTGTTGAGCTGCTCCGTGTTGTTTTTTCCCTTGTGAAGAAACCTTTCGCTGTTGTGGATACCACTGCGAAACTGGGGAAGTGTAAGTCTGTAAGAGTGACTAGCAAATGATAGCATTTTTGTTGCTTTAG ] [-] EMBL CB650729 [ AGGACCTAGTCAGCAGCATTGCAGAGTTCATCCGCAGTGGGGATTCTCACCACAACGGTGTTTTGGAGGACACAGACAAGTCGTGTGAGAAACTGTCTTCCATCAGTAATGGTATTCCATTGTGGATGGAGGATGGAGAGGTCGATGCTTCAGCATCCCCTCATAAGGAGACAGATACACAGATCATATCACCAAACCGAAAGAAAGCAAGGTTCGTGCTGCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAGCTCATGGATGCAAGGGAGGCTGGAATGTCCTTCATCTTAGGACACTCCTACATGAAGGCGAAGAGCGGGTCTAGTTTCATAAAGCGAATCGTGATAAACTTCTTCTACGAGTTCTTGAGGAGAAACAGCCGCGGACCATCTTATGCTGCTACCATACCTCATGCCTCCACACTGGAGGTGGGAATGGTCTACCAAGTCTGATAGTAGCAGCAGCTGTATAAAGCTAGAGATGAGATCTCCATCTGTACATATCACTTCATGCCGACACCGCTAACCTGAAGGTGGCAGTTGATGTTGGAGCACCTCATGGCCAGCCAGCCAGTTGCAAATCTTGGGAGAGCCAACAGGGAGTGTGCATTTTTGTCTGTAAAGCCTTCTGTTGAGCTGCTCCGTGTTGTTTTTTCCCTTGTGAAGAAACCTTTCGCTGTTGTGGATACCACTGCGAAACTGGGGAAGTGTAAGTCTGTAAGAGTGACCAGCAAATGATAGCATTTTTGTTGCTTTAG ] consensusID : consensus_11487#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 325 fasta sequence [TCCATTGTGGATGGAGGATGGAGAGGTCGATGCTTCAGCATCCCCTCATAAGGAGACAGATACACAGATCATGCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAGCTCTTAGGACACTCCTACATGAAGGCGAAGAGCGGGTCTAGTTTCATAAAGCGAATCGTGATAAACTTCTTCTACGAGTTCTTGAGGAGAAACAGCCGCGGACCATCTTATGCTGCTACCATACCTCATGCCTCCACACTGGAGGTGGGAATGGTCTACCAAGTCTGATAGTAGCAGCAGCTGTATAAAGCTAGAGATGAGATC] [+] EMBL BU572314 [TCCATTGTGGATGGAGGATGGAGAGGTCGATGCTTCAGCATCCCCTCATAAGGAGACAGATACACAGATCATGCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAGCTCTTAGGACACTCCTACATGAAGGCGAAGAGCGGGTCTAGTTTCATAAAGCGAATCGTGATAAACTTCTTCTACGAGTTCTTGAGGAGAAACAGCCGCGGACCATCTTATGCTGCTACCATACCTCATGCCTCCACACTGGAGGTGGGAATGGTCTACCAAGTCTGATAGTAGCAGCAGCTGTATAAAGCTAGAGATGAGATC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11487#0 TCGTCTCTCTGCTCTGCTCGTCGACTGCCACCACCAGTCCACCACCACCTTCGGCTGATA 60 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 CAAGAAGCGAGGGGGAGGTAGGAGAGAAGCCCACCACAGGGTGACCCCATCGGCCATCGC 120 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 GACATCTTCTTCTTCTTGCTCGCTTGCAATTTGACGCCGCGAGGGCGGGTGGTTTCGTGG 180 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 CCATGGCGGTCTCCGGTGCGGCGCATTGAGCCCAGCGTGCGAGGGGGCATGGATCTGGAG 240 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 GCCGCGCATGGCGCGGCTGCGGCGCCAGGGAAGAGGAGGAGGAGGGCGAGGGAGTCATGG 300 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 GGAGCGTCGCTGCTGCTCGCGTACCAGAGCCTCGGGGTGGTGTACGGCGACGTGGCCACG 360 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 TCGCCGCTGTACGTGTACAAGAGCGCCTTCGCCGGCGACGACATCCAGCACTCGGCGGGG 420 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 AACGAGGAGATCTACGGCGTGCTGTCCTTCGTGTTCTGGACGCTGACCCTCATCTCGCTC 480 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 GTCAAGTACGTGCTCATCGTGCTCCGCGCCGACGACGGCGGCGAGGGCGGCACGTTCGCG 540 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 CTCTACTCCCTCATCTGCCGCCACGTCCGCGCGGGCCTGCTTCCCGGCGGCGCCGGCGAC 600 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 GAGCTCGCCGTGGGAGGGCGTCGTGACGCCCGGGCCATGTCGAGGCTGAGGGCGATGCTG 660 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 GAGAGGTACAGGGTGCTGCAGAGGCTGCTGCTCCTGTTCGCGCTGCTCGGGACGTGTATG 720 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 GTCATCGGGGACGGCGTGCTCACCCCTGCGGTCTCTGTGTACTCTGCGGTCTCTGGGCTT 780 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 GAGTTGTCAATGGAGCATGAGCATCACAAATACGTACAACTTCCTGTGACGTGTGCCATA 840 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 CTTATAGGCTTGTTTGCGCTGCAACACTATGGTACACACAGAGTTGGATTTATCTTTGCC 900 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 CCAATTGTCTGCGTCTGGCTTCTCTGCATAAGTGCTATAGGGGTTTACAACATTGTTCAC 960 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 TGGAACCACCATGTGTACCGAGCCCTCTCACCATACTACATGTATCAGTTTCTCAAGAAG 1020 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 ACCCAAACAGGTGGTTGGATGTCACTGGGTGGAATTCTTCTATGTGTAACAGGTTCGGAA 1080 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 GCTATGTATGCAGATCTTGGACATTTCTCACAATCGTCAATTAAGATTGCGTTCATGTCT 1140 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 GTGGTTTATCCAGCTCTAGTTCTTGCTTACATGGGGCAGGCTGCTTATATCTCACAACAC 1200 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 CACAGCTTTGAGAATGCTTATCATATTGGATTCTATGTGTCAGTACCAGAAAAACTTAGA 1260 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 TGGCCTGTTCTGGTGATTGCTATACTAGCAGCTGTGGTTGGGAGCCAAGCAGTCATTACT 1320 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 GGCACCTTTTCAATTATCAAGCAGTGCTCTTCATTAAGTTGCTTCCCTGGCGTGAAAATT 1380 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 GTGCACACATCATCTACAGTACACGGTCAGATATACATACCTGAAATCAATTGGATCCTG 1440 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 ATGATACTCTGCCTGGCTGTTACTCTTGGCTTCAGAAACACGAAACATTTGGCAAATGCA 1500 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 CAAGGTCTGGCAGTTATAACTGTTATGCTTGTTACCACTTGTTTAATGTCACTGGTCATT 1560 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 GTGCTTTGCTGGAACAAAAGTATCTTCCTTGCGCTCGGTTTCCTGATTTTCTTTGGCACA 1620 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 ATCGAAGTACTCTACTTCTCAGCTTCCCTTGTCAAGTTTCATGAAGGCGCATGGGTCCCA 1680 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 ATTACCCTCTCCTTTATATTTATGATAGTCATGTGCGTGTGGCATTATGGCACTATAAAG 1740 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 AAGTATGAGTTCGATTTCCAAAACAAGGTTTCAGTAAACTGGCTCTTGAACCTTGGTCCT 1800 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 TCATTGGGGATTGTCCGTGTTCGAGGCATTGGACTGATACATACAGAACTGGTATCTGGA 1860 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 ATTCCAGCCATCTTCTCCCACTTCGTCACTAATCTGCCTGCATTTCACCAGGTACTGGTT 1920 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 TTTCTGTGTGTTAAATCAGTTCCAGTGCCACATGTTCAACCTGAAGAACGGTTTCTAGTG 1980 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 GGTCGCATTGGTCCAAAAGAGTACAGGCTATACAGGGTCATCGTGAGGTATGGGTACCGT 2040 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 GATGTGCAGAAGGATGACATAGAGTTTGAAAAGGACCTAGTCAGCAGCATTGCAGAGTTC 2100 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 ATCCGCAGTGGGGATTCTCACCACAACGGTGTTTTGGAGGACACAGACAAGTCGTGTGAG 2160 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 AAACTGTCTTCCATCAGTAATGGTATTCCATTGTGGATGGAGGATGGAGAGGTCGATGCT 2220 consensus_11487#1 --------------------------TCCATTGTGGATGGAGGATGGAGAGGTCGATGCT 34 ********************************** consensus_11487#0 TCAGCATCCCCTCATAAGGAGACAGATACACAGATCATATCACCAAACCGAAAGAAAGCA 2280 consensus_11487#1 TCAGCATCCCCTCATAAGGAGACAGATACACAGATCAT---------------------- 72 ************************************** consensus_11487#0 AGGTTCGTGCTGCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAG 2340 consensus_11487#1 -----------GCCAAAGAATGCCCAGGTGGACAGCGAAGTGCGCCGTGAGCTGCAGGAG 121 ************************************************* consensus_11487#0 CTCATGGATGCAAGGGAGGCTGGAATGTCCTTCATCTTAGGACACTCCTACATGAAGGCG 2400 consensus_11487#1 CTC---------------------------------TTAGGACACTCCTACATGAAGGCG 148 *** ************************ consensus_11487#0 AAGAGCGGGTCTAGTTTCATAAAGCGAATCGTGATAAACTTCTTCTACGAGTTCTTGAGG 2460 consensus_11487#1 AAGAGCGGGTCTAGTTTCATAAAGCGAATCGTGATAAACTTCTTCTACGAGTTCTTGAGG 208 ************************************************************ consensus_11487#0 AGAAACAGCCGCGGACCATCTTATGCTGCTACCATACCTCATGCCTCCACACTGGAGGTG 2520 consensus_11487#1 AGAAACAGCCGCGGACCATCTTATGCTGCTACCATACCTCATGCCTCCACACTGGAGGTG 268 ************************************************************ consensus_11487#0 GGAATGGTCTACCAAGTCTGATAGTAGCAGCAGCTGTATAAAGCTAGAGATGAGATCTCC 2580 consensus_11487#1 GGAATGGTCTACCAAGTCTGATAGTAGCAGCAGCTGTATAAAGCTAGAGATGAGATC--- 325 ********************************************************* consensus_11487#0 ATCTGTACATATCACTTCATGCCGACACCGCTAACCTGAAGGTGGCAGTTGATGTTGGAG 2640 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 CACCTCATGGCCAGCCAGCCAGTTGCAAATCTTGGGAGAGCCAACAGGGAGTGTGCATTT 2700 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 TTGTCTGTAAAGCCTTCTGTTGAGCTGCTCCGTGTTGTTTTTTCCCTTGTGAAGAAACCT 2760 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 TTCGCTGTTGTGGATACCACTGCGAAACTGGGGAAGTGTAAGTCTGTAAGAGTGACCAGC 2820 consensus_11487#1 ------------------------------------------------------------ consensus_11487#0 AAATGATAGCATTTTTGTTGCTTTAGCAACTTGGTAACTTGTCTAAAATGGCA 2873 consensus_11487#1 ----------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||