These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11510#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1931 fasta sequence [GCGACGATGAGTAATATATCATCAAAGGATATAATGGAGACATTAATTTCCTCGATCAGCTACTGCTGATCCTCCTTCTTCGAGAAATAGCTGGCACAGCCACGCCGAAGCCATGATTCATCGCCATGTTCCTCTTTTAGTGCTTGATCCTGACGCTGCGGCTTCTTAGGTGTAAGAACAGGTTTATTTTTATGTGCTCTGATGTCTTTCTTCACCTGCTTAGGGACATTGTCACAGTCCAGATCAAGCTCCTTCAATTTCTCAACATTGCCAATGCCAGGGAGAGGCTCCAACTCAGCGAAGGACGGCCGTGACCAGATGATCTTCTCAAGGTACGGCGGAATCGGTGGCTCGACGCAAAGCATCTCGCCCCCCCCCCTCCCCCCCACGCATCACCACGATTTCTGCTTCTCCTCCCGGCAGGCGGCGGCGCTGCCCCCGACCCCCCGACGCAGGCACCGCATCACCGCATCTCTCCCGAGCCCCCGACGGATCACTGCATCACCGCGGTTTCCGCTAGTCCTCCCGGCAGGCGGCGGCGCTGGTCGCGCCACCCCCGAGCCCCCGGCGCGGTATTTGTTTTCCCATATATTTTCTGTAATTAGTTTTTGCCAAACTGATTGAAAGGTTCTTTAGCGGTTGACAAGGTATTCCGAGGCCTTCTTGCAGGTATATGAACCTCAACTCTATTGTTTTGTAACAAAAACAAATCATTCAATTGCGACTGTAGTTTATGATAGAGTATCTGC-AGAGTTTTCCACTGATACT-GAACAATGGCACTGC-ATAAATTGTTTCTTTA-TGTTATTTCGAAAGTTTGC-AAGTTATTTCCTCGTTAATTTCAGTATTTTGAAATTTGAATGGCTGGGTTATCAGATCAGTATCTGATCCGATGTGTTCAATTTGCATTGTTGTATTTAAGCCGAAAGAGACCCCCTCGCTGCTGGAGCAAACAACTGCCGGCAGGAAGGTGTGGCAATATCTGGCTTGCTAGATGGAACTGGAGATTATGAAGGTGACAGGGTGCTTGTTGGAGATGTGCCGTGGGGGTGTGTTTTCCGTTCTACCTTGCATTTTCAGAGAGTAGTAAACAAAGTTACTACATTTATTGGATACTGATTACGCAAACAGCAATGCTTAAAAATGATATGCAGTCTATTGCCTTAATTTTTTTTTCAGTTTTATTGATTATCAAATGATTATCAAACTGAGAAAAAATAATTCTACCATCAAACTAGACCATGCCTCCTATTTGATAGGAGCAATTTTACGGTTCTTAAGGAGATACCATGAGGTATCATTTTTTTTATTGTAAATTTGGTACCTCTTGGTATCACTAAATTTTTTTTATCTCATAGTACCTTCTCAAAAGGATTGTAGAATTGCTTATCTGATAGTCTGAAACTCCAAATCATGTAGGATGTTTGTTTCTTCAGTTAAGAGACTGAGAGTACTGAAGACATCTGACCTATCTTCATCTGTTAGTACCTCTTTCCACCTTCCTTCTATTACATCAAACTCACGGTAATCTCCGCATTATTCTGAAATTTCTTCATGCCATATAATCCATGCAGCTTAACTTCTGGACGGAAAAGAACAGCAGCTGAGTGTTGACCTTCTTTTTTCGATCTGCTTAACACTTTCAGTGACCTGCTGTTCAGAAGAATATGATCCTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTTGCTGTGCTGAGCTTGTAACCAGCCATTAGAGAAGACAGTCCGAGATTAGGGCAAAAGGATAGCTCCATCCAAGAGACGAAGGCCATTCAGTGAGACATTGCACACAAATAACCAATAAGGTTATTGTGGCTCACAAACTTTGTATCTTTTGTATTAATGGCATTGTTTTTTTATTGGATTAATGGCAGCAATAGCTATTATATATAGTGTGCAAACAGGAGG] [+] EMBL AK101779 [GCGACGATGAGTAATATATCATCAAAGGATATAATGGAGACATTAATTTCCTCGATCAGCTACTGCTGATCCTCCTTCTTCGAGAAATAGCTGGCACAGCCACGCCGAAGCCATGATTCATCGCCATGTTCCTCTTTTAGTGCTTGATCCTGACGCTGCGGCTTCTTAGGTGTAAGAACAGGTTTATTTTTATGTGCTCTGATGTCTTTCTTCACCTGCTTAGGGACATTGTCACAGTCCAGATCAAGCTCCTTCAATTTCTCAACATTGCCAATGCCAGGGAGAGGCTCCAACTCAGCGAAGGACGGCCGTGACCAGATGATCTTCTCAAGGTACGGCGGAATCGGTGGCTCGACGCAAAGCATCTCGCCCCCCCCCCTCCCCCCCACGCATCACCACGATTTCTGCTTCTCCTCCCGGCAGGCGGCGGCGCTGCCCCCGACCCCCCGACGCAGGCACCGCATCACCGCATCTCTCCCGAGCCCCCGACGGATCACTGCATCACCGCGGTTTCCGCTAGTCCTCCCGGCAGGCGGCGGCGCTGGTCGCGCCACCCCCGAGCCCCCGGCGCGGTATTTGTTTTCCCATATATTTTCTGTAATTAGTTTTTGCCAAACTGATTGAAAGGTTCTTTAGCGGTTGACAAGGTATTCCGAGGCCTTCTTGCAGGTATATGAACCTCAACTCTATTGTTTTGTAACAAAAACAAATCATTCAATTGCGACTGTAGTTTATGATAGAGTATCTGC AGAGTTTTCCACTGATACT GAACAATGGCACTGC ATAAATTGTTTCTTTA TGTTATTTCGAAAGTTTGC AAGTTATTTCCTCGTTAATTTCAGTATTTTGAAATTTGAATGGCTGGGTTATCAGATCAGTATCTGATCCGATGTGTTCAATTTGCATTGTTGTATTTAAGCCGAAAGAGACCCCCTCGCTGCTGGAGCAAACAACTGCCGGCAGGAAGGTGTGGCAATATCTGGCTTGCTAGATGGAACTGGAGATTATGAAGGTGACAGGGTGCTTGTTGGAGATGTGCCGTGGGGGTGTGTTTTCCGTTCTACCTTGCATTTTCAGAGAGTAGTAAACAAAGTTACTACATTTATTGGATACTGATTACGCAAACAGCAATGCTTAAAAATGATATGCAGTCTATTGCCTTAATTTTTTTTTCAGTTTTATTGATTATCAAATGATTATCAAACTGAGAAAAAATAATTCTACCATCAAACTAGACCATGCCTCCTATTTGATAGGAGCAATTTTACGGTTCTTAAGGAGATACCATGAGGTATCATTTTTTTTATTGTAAATTTGGTACCTCTTGGTATCACTAAATTTTTTTTATCTCATAGTACCTTCTCAAAAGGATTGTAGAATTGCTTATCTGATAGTCTGAAACTCCAAATCATGTAGGATGTTTGTTTCTTCAGTTAAGAGACTGAGAGTACTGAAGACATCTGACCTATCTTCATCTGTTAGTACCTCTTTCCACCTTCCTTCTATTACATCAAACTCACGGTAATCTCCGCATTATTCTGAAATTTCTTCATGCCATATAATCCATGCAGCTTAACTTCTGGACGGAAAAGAACAGCAGCTGAGTGTTGACCTTCTTTTTTCGATCTGCTTAACACTTTCAGTGACCTGCTGTTCAGAAGAATATGATCCTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTTGCTGTGCTGAGCTTGTAACCAGCCATTAGAGAAGACAGTCCGAGATTAGGGCAAAAGGATAGCTCCATCCAAGAGACGAAGGCCATTCAGTGAGACATTGCACACAAATAACCAATAAGGTTATTGTGGCTCACAAACTTTGTATCTTTTGTATTAATGGCATTGTTTTTTTATTGGATTAATGGCAGCAATAGCTATTATATATAGTGTGCAAACAGGAGG] [+] EMBL CB673640 [ ACGCATCACCTCGATTTCTGCTTCTCCTCCCGGCAGGCGGCGGCGCTGCCCCCGACCCCCCGACGCAGGCACCGCATCACCGCATCTCTCCCGAGCCCCCGACGGATCACTGCATCACCGCGGTTTCCGCTAGTCCTCCCGGCAGGCGGCGGCGCTGGTCGCGCCACCCCCGAGCCCCCGGCGCGGTATTTGTTTTCCCATATATTTTCTGTAATTAGTTTTTGCCAAACTGATTGAAAGGGTCTTTAGCGGTTGACAAGGTATTCCGAGGCCTTCTTGCAGGTATATGAACCTCAACTCTATTGTTTTGTAACAAAAACAAATCATTCAATTGCGACTGTAGTTTATGATAGAGTATCTGC AGAGTTTTCCACTGATACT GAACAATGGCACTGC ATAAATTGTTTCTTTA TGTTATTTCGAAAGTTTGC AAGTTATTTCCTCGTTAATTTCAGTATTTTGAAATTTGAATGGCTGGGTTATCAGATCAGTATCTGATCCGATGTGTTCAATTTGCATTGTTGTATTTAAGCCGAAAGAGACCCCCTCGCTGCTGGAGCAAACAACTGCCGGCAGGAAGGTGTGGCAATATCTGGCTTGCTAGATGGAACTGGAGATTATGAAGGTGACAGGGTGCTTGTTGGAGATGTGCCGTGGGGGTGTGTTTTCCGTTCTACCTTGCATTTTCAGAGAGTAGTAAACAAAGTTACTACATTTATTGGATACTGATTACGCAAACAGCAATGCTTAAAAATGATATGCAGTCTATTGCCTTAATTTTTTTTTCAGTTTT ] [+] EMBL C71717 [ CTCCCGGCAGGCGGCGGCGCTGCCCCCNACCCCCCGACGCAGGCACCGCATCACCGCATCTTTCCCGAGCCCCCGACGGATCACTGCATCACCGCGGTTTCCGCTAGTCCTCCCGGCAGGCGGCGGCGCTGGTCGCGCCACCCCCNAGCCCCCGGCGCGGTATTTNTTTTCCCATATATTTTCTGTAATTAGTTTTTGCCAAACTGATTGAAAGGTTCTTTAGCGGTTGACAAGGTATTCCGAGGCCTTCTTGCAGGTATATGAACCTCAACTCTATTGTTTTGTAACAAAAACAAATCATTCAATTGCGACTGTAGTTTATGATAGAGTATCTGCAAGAGTTTTCCACTGATACTGGACCANTNGCACTGCAATAAATNGTTTCTTTANGGTAATTTGGAAGGTTTGCAAAGTTATTTCCNCGgt ] consensusID : consensus_11510#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1411 fasta sequence [TCTCAGCTCAGCTCAGGCTCAGCTAGACGCTACTCGCATCGGAGCATCACATTGCCGTGTGCCGTTGCTCGCATTGCAGCTGCAGCTACTACTACCATTCCCACACCTTTTCTAGCTCTCTGTTCCACACCTCTCCCTCTTGCATTGCAGCCAAGACAGCAACCAGCAGCAGCAGCAGCTCAGCTAGCTAGTTTCTGCTTTCTTGATTTGTTCTTGGATTTGGGCGAGCTGTACATCTAGAGAGCGGGTGATGGGGGAGGCGTCGGAGAGCATGAAGAAGATCAGCAGAGGCCGTCTCGGCGGAAGCTGGATGGGGGAGCCAAGCGATCACCATCGCCATGGCGATGAACAGGAGGAGGAGGAGAAGACGCTGGAGCTCAGCCTTGGGCTCCCCGGAGGAGGATGGCGAGCGGCGTGCAGGGACAAGGGGACGACGACGAAGCACTCCATTGCAGCAGCTGCTGCTG-CTGATGATGATGATGGTGACAAGAGCTCCATGCTCTCCCTGGGCTACTCCACACTCGTCTCCCACTCGCAAGGCAAGGCAAACAAAAACAAGGGGTCCCCAGAGGAAGAAGAGGCACATCCACCACCAGCTACAGGGAATAATGCACTTGCATCCAACAATAATGGCTGCTTCCAGACAAGATCTCCTAGTACTCCTGTTGTTGGTTGGCCTCCGGTTCGAACATTCAGAAGAAATCTGGCTACATCCAGCAAAGCATCTCTTGAACTGCAGAATGGAAAGAAGGCTGCAAAAGCAGAAGAGATCAAGAGAGCTCCATTCATAAAGATAAACATGGATGGTGTCCCTATTGGTAGAAAGATCGATCTGAATGCTTTTGATAGCTATGAGAAGCTTTCTTTAGCGGTTGACAAGCTATTCCGAGGCCTTCTTGCAGCCCAAAGAGACCCCCTCACTGCTGGAGCAAAGGACTGCCAGCAGGAAGATGTGGCAATATCTGGCTTGCTAGATGGAACTGGGGAGTACACTTTGGTTTATGAGGATTATGAAGGCGACAAGGTGCTTGTTGGAGATGTGCCATGGGGGATGTTTGTTTCTTCAGTTAAGAGACTGAGAGTACTGAAGACATCTGACCTCTCTTCATCTCTAATAACCTCTGGACGGAAAAGAACAGCTGCTGAGTGTTGACCTTCTTTTTTGGAGCTGCTTTGACACATTCAGTGACCTGCTGTGAAGAAGAATATGATCTTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTTGCTGTGCTGATCTTTTGGGGTTTTCCTGTTCCTACTTAACCAACTTGCTTCCTTCTGTTTAAGACACTTGTGTGAAGTGAGTGCAATTTGACATGACCATCATGTAAATGTTCAGCTAAATGCTCTACATTTATGCAGTTTATTCTCTGGCAAAAAAAA] [+] EMBL AK121870 [TCTCAGCTCAGCTCAGGCTCAGCTAGACGCTACTCGCATCGGAGCATCACATTGCCGTGTGCCGTTGCTCGCATTGCAGCTGCAGCTACTACTACCATTCCCACACCTTTTCTAGCTCTCTGTTCCACACCTCTCCCTCTTGCATTGCAGCCAAGACAGCAACCAGCAGCAGCAGCAGCTCAGCTAGCTAGTTTCTGCTTTCTTGATTTGTTCTTGGATTTGGGCGAGCTGTACATCTAGAGAGCGGGTGATGGGGGAGGCGTCGGAGAGCATGAAGAAGATCAGCAGAGGCCGTCTCGGCGGAAGCTGGATGGGGGAGCCAAGCGATCACCATCGCCATGGCGATGAACAGGAGGAGGAGGAGAAGACGCTGGAGCTCAGCCTTGGGCTCCCCGGAGGAGGATGGCGAGCGGCGTGCAGGGACAAGGGGACGACGACGAAGCACTCCATTGCAGCAGCTGCTGCTG CTGATGATGATGATGGTGACAAGAGCTCCATGCTCTCCCTGGGCTACTCCACACTCGTCTCCCACTCGCAAGGCAAGGCAAACAAAAACAAGGGGTCCCCAGAGGAAGAAGAGGCACATCCACCACCAGCTACAGGGAATAATGCACTTGCATCCAACAATAATGGCTGCTTCCAGACAAGATCTCCTAGTACTCCTGTTGTTGGTTGGCCTCCGGTTCGAACATTCAGAAGAAATCTGGCTACATCCAGCAAAGCATCTCTTGAACTGCAGAATGGAAAGAAGGCTGCAAAAGCAGAAGAGATCAAGAGAGCTCCATTCATAAAGATAAACATGGATGGTGTCCCTATTGGTAGAAAGATCGATCTGAATGCTTTTGATAGCTATGAGAAGCTTTCTTTAGCGGTTGACAAGCTATTCCGAGGCCTTCTTGCAGCCCAAAGAGACCCCCTCACTGCTGGAGCAAAGGACTGCCAGCAGGAAGATGTGGCAATATCTGGCTTGCTAGATGGAACTGGGGAGTACACTTTGGTTTATGAGGATTATGAAGGCGACAAGGTGCTTGTTGGAGATGTGCCATGGGGGATGTTTGTTTCTTCAGTTAAGAGACTGAGAGTACTGAAGACATCTGACCTCTCTTCATCTCTAATAACCTCTGGACGGAAAAGAACAGCTGCTGAGTGTTGACCTTCTTTTTTGGAGCTGCTTTGACACATTCAGTGACCTGCTGTGAAGAAGAATATGATCTTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTTGCTGTGCTGATCTTTTGGGGTTTTCCTGTTCCTACTTAACCAACTTGCTTCCTTCTGTTTAAGACACTTGTGTGAAGTGAGTGCAATTTGACATGACCATCATGTAAATGTTCAGCTAAATGCTCTACATTTATGCA ] [+] EMBL C27285 [ CGGAGAGCATGAAGAAGATCAGCAGAGGCCGTCTCGGCGGAAGCTGGATGGGGGAGCCAAGCAATCACCATCGCCATGGCGATGAACAGGAGGAGGAGGAGAAGACGCTGGAGCTCAGCCTTGGGCTCCCCGGAGGAGGATGGCGAGCGGCGTGCAGGGACAAGGGGACGACGACGAAGCACTCCATTGCAGCAGCTGCT CTGTTTNATGATGATGATGGTGACAAGAGCTCCATGCTCTCCCTGGGCTACTCCACACTCGTTTCCCACTCGCAAGGCAAGGCAAACAAANAC ] [+] EMBL AU100805 [ AAAGCATCTCTTGAACTGCAGAATGGAAAGAAGGCTGCAAAAGCAGAAGAGATCAAGAGAGCTCCATTCATAAAGATAAACATGGATGGTGTCCCTATTGGTAGAAAGATCGATCTGAATGCTTTTGATAGCTATGAGAAGCTTTCTTTAGCGGTTGACAAGCTATTCCGAGGCCTTCTTGCAGCCCAAAGAGACCCCCTCACTGCTGGAGCAAAGGACTGCCAGCAGGAAGATGTGGCAATATCTGGCTTGCTAGATGGAACTGGGGAGTACACTTTGGTTTATGAGGATTATGAAGGCGACAAGGTGCTTGTTGGAGATGTGCCATGGGGGATGTTTGTTTCTTCAGTTAAGAGACTGAGAGTACTGAAGACATCTGACCTCTCTTCATCTCTAATAACCTCTGGACGGAAAAGAACAGCTGCTGAGTGTTGACCTTCTTTTTTGGAGCTGCTTTGACACATTCAGTGACCTGCTGTGAAGAAGAATATGATCTTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTTGCTGTGCTGATCTTTTGGGGTTTTCCTGTTCCTACTTAACCAACTTGCTTCCTTCTGTTTAAGACACTTGTGTGAAGTGAGTGCAATTTGACATGACCATCATGTAAATGTTCAGCTAAATGCTCTACATTTATGCAGTTTATTCTCTGGCAAAAAAAA] [+] EMBL OSS13974A [ TGCAAAAGCAGAAGAGATCAAGAGAGCTCCATTCATAAAGATAAACATGGATGGTGTCCCTATTGGTAGAAAGATCGATCTGAATGCTTTTGATAGCTATNAGAAGCTTTCTTTAGCGGTTGACAAGCTATTCCGAGGCCTTCTTGCAGCCCAAAGGGA CCCCTCACTGCTGGAGCAAAGNNCTNCCANCAGGAAGATGTGGCAATATCTGGCTTNCTAGATGGACCTGGGGAGTACACTTTGGTTTATGAGGATTATGAAGGCGCCAAGGTGCTTTTTGGAGATGTNCCATGGGGGATGTTTGTTTnt ] consensusID : consensus_11510#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 748 fasta sequence [CCATGCCTCCTATTTGATAGGAGCAATTTTACGGTTCTTAAGGAGATACCATGAGGTATCATTTTTTTTATTGTAAATTTGGTACCTCTTGGTATCACTAAATTTTTTTTATCTCATAGTACCTTCTCAAAAGGATTGTAGAATTGCTTATCTGATAGTCTGAAACTCCAAATCATGTAGGATGTTTGTTTCTTCAGTTAAGAGACTGAGAGTACTGAAGACATCTGACCTATCTTCATCTCTTATAACTTCTGGACGGAAAAGAACAGCAGCTGAGTGTTGACCTTCTTTTTTCGATCTGCTTTAACACTTTCAGTGACCTGCTGTTCAGAAGAATATGATCCTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTTGCTGTGCTGAGCTTGTAACCAGCCATTAGAGAAGACAGTCCGAGATTAGGGCAAAAGGATAGCTCCATCCAAGAGACGAAGGCCATTCAGTGAGACATTGCACACAAATAACCAATAAGGGTCAGGTTCTTAGTGAGAGATGGTGAAACAGAAGGGAGCTCCAGTAGCATGTTTTGGTTCTTGAAGCCTTGCACATTTCTAGTGGAGTAACAGCAAAATAACCAGAAGCTTTGAAGAACTGCACTTTATGTAGTCAGGATACATTATTTCATTCTATTCGATTCCAATTTGGCCAATTCATATGATCGACATTTTTGTCAGGAAATAAACAGCAAGCAATGTAGGGTTACTTACCANAAGTGATAC] [-] EMBL CB673641 [CCATGCCTCCTATTTGATAGGAGCAATTTTACGGTTCTTAAGGAGATACCATGAGGTATCATTTTTTTTATTGTAAATTTGGTACCTCTTGGTATCACTAAATTTTTTTTATCTCATAGTACCTTCTCAAAAGGATTGTAGAATTGCTTATCTGATAGTCTGAAACTCCAAATCATGTAGGATGTTTGTTTCTTCAGTTAAGAGACTGAGAGTACTGAAGACATCTGACCTATCTTCATCTCTTATAACTTCTGGACGGAAAAGAACAGCAGCTGAGTGTTGACCTTCTTTTTTCGATCTGCTTTAACACTTTCAGTGACCTGCTGTTCAGAAGAATATGATCCTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTTGCTGTGCTGAGCTTGTAACCAGCCATTAGAGAAGACAGTCCGAGATTAGGGCAAAAGGATAGCTCCATCCAAGAGACGAAGGCCATTCAGTGAGACATTGCACACAAATAACCAATAAGGGTCAGGTTCTTAGTGAGAGATGGTGAAACAGAAGGGAGCTCCAGTAGCATGTTTTGGTTCTTGAAGCCTTGCACATTTCTAGTGGAGTAACAGCAAAATAACCAGAAGCTTTGAAGAACTGCACTTTATGTAGTCAGGATACATTATTTCATTCTATTCGATTCCAATTTGGCCAATTCATATGATCGACATTTTTGTCAGGAAATAAACAGCAAGCAATGTAGGGTTACTTACCANAAGTGATAC] consensusID : consensus_11510#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 666 fasta sequence [GATGTCCCCTTGGGGGATGGTTNGTTTCCTCCAGTTAAGAGACTGAGAGTACTGAAGACATCTGCCCTATCTTCCTCTCTTATAACTTCTGGACGGAAAAGACCAGCAGCTGAGTGTTGACCCTCTTTTTTCGATCTGCTTTAACCTTTCCANTGNCCTGCTGTTCAGAAGATATGACCCTCTGAGCTTGTATCATCGTCTCTTTCTCTCATGTCTTGCTGTGCTGAGCTTGTAACCAGCCTTAGAGAAGACAGTCCGAGATTAGGGCAAAGGATAGCTCCATCCAAGAGACGAAGGCCTTCCAGTGAGACATTGCACACAATAACCATAAGGGTCCAGGTTCTTAGTGAGAGATGGTGAAACAGAAGGGAGCCCCAGTAGCATGTTTTGGTTCTTGAGCCTTGCACATTTCTAGTGGAGTAACAGCAAAATAACCAGAAGCTTTGAAGAACTGCACTTTATGTAGTCAGGATACATTATTTCATTCTATTCGATTCCAATTTGGCCAATTCATATGATCGACATTTTTGTCAGGAAATAAACAGCAAGCAATGTATAGTTACTTACCAAAGTGATACATGTTTGAGAGATTCTTTCCATATGTTGGGTTCAAGATATAGAAAAATATTGTTCTTATGTGGCTTAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL C98414 [GATGTCCCCTTGGGGGATGGTTNGTTTCCTCCAGTTAAGAGACTGAGAGTACTGAAGACATCTGCCCTATCTTCCTCTCTTATAACTTCTGGACGGAAAAGACCAGCAGCTGAGTGTTGACCCTCTTTTTTCGATCTGCTTTAACCTTTCCANTGNCCTGCTGTTCAGAAGATATGACCCTCTGAGCTTGTATCATCGTCTCTTTCTCTCATGTCTTGCTGTGCTGAGCTTGTAACCAGCCTTAGAGAAGACAGTCCGAGATTAGGGCAAAGGATAGCTCCATCCAAGAGACGAAGGCCTTCCAGTGAGACATTGCACACAATAACCATAAGGGTCCAGGTTCTTAGTGAGAGATGGTGAAACAGAAGGGAGCCCCAGTAGCATGTTTTGGTTCTTGAGCCTTGCACATTTCTAGTGGAGTAACAGCAAAATAACCAGAAGCTTTGAAGAACTGCACTTTATGTAGTCAGGATACATTATTTCATTCTATTCGATTCCAATTTGGCCAATTCATATGATCGACATTTTTGTCAGGAAATAAACAGCAAGCAATGTATAGTTACTTACCAAAGTGATACATGTTTGAGAGATTCTTTCCATATGTTGGGTTCAAGATATAGAAAAATATTGTTCTTATGTGGCTTAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11510#0 GCGACGATGAGTAATATATCATCAAAGGATATAATGGAGACATTAATTTCCTCGATCAGC 60 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 ------------------------------------------------------------ consensus_11510#0 TACTGCTGATCCTCCTTCTTCGAGAAATAGCTGGCACAGCCACGCCGAAGCCATGATTCA 120 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 ------------------------------------------------------------ consensus_11510#0 TCGCCATGTTCCTCTTTTAGTGCTTGATCCTGACGCTGCGGCTTCTTAGGTGTAAGAACA 180 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 ------------------------------------------------------------ consensus_11510#0 GGTTTATTTTTATGTGCTCTGATGTCTTTCTTCACCTGCTTAGGGACATTGTCACAGTCC 240 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 ------------------------------------------------------------ consensus_11510#0 AGATCAAGCTCCTTCAATTTCTCAACATTGCCAATGCCAGGGAGAGGCTCCAACTCAGCG 300 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 ------------------------------------------------------------ consensus_11510#0 AAGGACGGCCGTGACCAGATGATCTTCTCAAGGTACGGCGGAATCGGTGGCTCGACGCAA 360 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 ------------------------------------------------------------ consensus_11510#0 AGCATCTCGCCCCCCCCCCTCCCCCCCACGCATCACCACGATTTCTGCTTCTCCTCCCGG 420 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 ---TCTCAGCTCAGCTCAGGCTCAGCTAGACGCTACTCGCATCGGAGCATCACATTGCCG 57 consensus_11510#0 CAGGCGGCGGCGCTGCCCCCGACCCCCCGACGCAGGCACCGCATCACCGCATCTCTCCCG 480 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 TGTGCCGTTGC-TCGCATTGCAGCTGCAGCTACTACTACC--ATTCCCACACCTTTTCTA 114 consensus_11510#0 AGCCCCCGACGGATCACTGCATCACCGCGGTTTCCGCTAGTCCTCCCGGCAGGCGGCGGC 540 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 GCTCTCTGTTCCACACCTCTCCCTCTTGCATTGCAGCCAAGACAGCAACCAG-CAGCAGC 173 consensus_11510#0 GCTGGTCGCGCCACCCCCGAGCCCCCGGCGCGGTATTTGTTTTCCCATATATTTTCTGTA 600 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 AGCAGCTCAGCTAGCTAGTTTCTGCTTTCTTGATTTGTTCTTGGATTTGGGCGAGCTGTA 233 consensus_11510#0 ATTAGTTTTTGCCAAACTGATTGAAAGGTTCTTTAGCGGTTGACAAGGTATTCCGAGGCC 660 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 CATCTAGAGAGCGGGTGATGGGGGAGGCGTCGGAGAGCATGAAGAAGATCAGCAGAGGCC 293 consensus_11510#0 TTCTTGCAGGTATATGAACCTCA-ACTCTATTGTTTTGTAACAAAAACAAATCATTCAAT 719 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 GTCTCGGCGGAAGCTGGATGGGGGAGCCAAGCGATCACCATCGCCATGGCGATGAACAGG 353 consensus_11510#0 TGCGACTGTAGTTTATGATAGAGT--ATCTGCAGAGTTTTCCACTGATACTGAACAATGG 777 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 AGGAGGAGGAGAAGACGCTGGAGCTCAGCCTTGGGCTCCCCGGAGGAGGATGGCGAGCGG 413 consensus_11510#0 CACTGCATAAATTGTTTCTTTATGTTATTTCGAAAGTTTGCAAGTTATTTCCTCGTTAAT 837 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 CG-TGCAGGGACAAGGGGACGACGACGAAGCACTCCATTGCAGCAGCTGCTGCTGCTGAT 472 consensus_11510#0 TTCAGTATTTTGAAATTTGAATGGCTGGGTTATCAGATCAGTATCTGATCCGATGTGTTC 897 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 GATGATGATGGTGACAAGAGCTCCATGCTCTCCCTGGGCTACTCCACACTCGTCTCCCAC 532 consensus_11510#0 AATTTGCATTGTTGTATTTAAGCCGAAAGAGACCCCCTCGCTGCTGGAGCAAA-CAACTG 956 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 TCGCAAGGCAAGGCAAACAAAAACAAGGGGTCCCCAGAGGAAGAAGAGGCACATCCACCA 592 consensus_11510#0 CCGGCAGGAAGGTGTGGCAATATCTGGCTTGCTAGATGGAACTGGAGATTATGAAGGTGA 1016 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 CCAGCTACAGGGAATAATGCACTTGCATCCAACAATAATGGCTGCTTCCAGACAAGATCT 652 consensus_11510#0 CAGGGTGCT--TGTTGGAGATGTGCCGTGGGGGTGTGTTTTCCGTTCTACCTTG--CATT 1072 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 CCTAGTACTCCTGTTGTTGGTTGGCCTCCGGTTCGAACATTCAGAAGAAATCTGGCTACA 712 consensus_11510#0 TTCAGAGAGTAGTAAACAAAGTTACTACATTTATTGGATACTGATTACGCAAACAGCAAT 1132 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 TCCAGCAAAGCATCTCTTGAACTGCAGAATGGAAAGAAGGCTGCAAAAGCAGAAGAGATC 772 consensus_11510#0 GCTTAAAAATGATATGCAGTCTATTGCCTTAATTTTTTTTTCAGTTTTATTGATTATCAA 1192 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 AAGAGAGCTCCATTCATAAAGATAAACATGGATGGTGTCCCTATTGGTAGAAAGATCGAT 832 consensus_11510#0 ATGATTATCAAACTGAGAAAAAATAATTCTACCATCAAACTAGACCATGCCTCCTATTTG 1252 consensus_11510#2 --------------------------------------------CCATGCCTCCTATTTG 16 consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 CTGAATGCTTTTGATAGCTATGAGAAGCTTTCTTTAGCGGTTGACAAGCTATTCCGAGGC 892 consensus_11510#0 ATAGGAGCAATTTTACGGTTCTTAAGGAGATACCATGAGGTATCATTTTTTTTATTGTAA 1312 consensus_11510#2 ATAGGAGCAATTTTACGGTTCTTAAGGAGATACCATGAGGTATCATTTTTTTTATTGTAA 76 consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 CTTCTTGCAGCCCAAAGAGACCCCCTCAC-TGCTGGAGCAAAGGACTGCCAGCAG-GAAG 950 consensus_11510#0 ATTTGGTACCTCTTGGTATCACTAAATTTTTTTTATCTCATAGTACCTTCTCAAAAGGAT 1372 consensus_11510#2 ATTTGGTACCTCTTGGTATCACTAAATTTTTTTTATCTCATAGTACCTTCTCAAAAGGAT 136 consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 ATGTGGCAATATCTGGC-TTGCTAGATGGAACTGGGGAGTACACTTTGGTTTATGAGGAT 1009 consensus_11510#0 TGTAGAATTGCTTATCTGATAGTCTGAAACTCCAAATCATGTAGGATGTTTG--TTTCTT 1430 consensus_11510#2 TGTAGAATTGCTTATCTGATAGTCTGAAACTCCAAATCATGTAGGATGTTTG--TTTCTT 194 consensus_11510#3 -------------------------GATGTCCC----CTTGGGGGATGGTTNGTTTCCTC 31 consensus_11510#1 TATGAAGGCGACAAGGTGCTTGTTGGAGATGTG---CCATGGGGGATGTTTG--TTTCTT 1064 ** * ** ***** ** ** ** consensus_11510#0 CAGTTAAGAGACTGAGAGTACTGAAGACATCTGACCTATCTTCATCTGTTAGTACCTCTT 1490 consensus_11510#2 CAGTTAAGAGACTGAGAGTACTGAAGACATCTGACCTATCTTCATCTCTTA--------- 245 consensus_11510#3 CAGTTAAGAGACTGAGAGTACTGAAGACATCTGCCCTATCTTCCTCTCTTA--------- 82 consensus_11510#1 CAGTTAAGAGACTGAGAGTACTGAAGACATCTGACCTCTCTTCATCTCTAA--------- 1115 ********************************* *** ***** *** * * consensus_11510#0 TCCACCTTCCTTCTATTACATCAAACTCACGGTAATCTCCGCATTATTCTGAAATTTCTT 1550 consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 ------------------------------------------------------------ consensus_11510#1 ------------------------------------------------------------ consensus_11510#0 CATGCCATATAATCCATGCAGCTTAACTTCTGGACGGAAAAGAACAGCAGCTGAGTGTTG 1610 consensus_11510#2 -----------------------TAACTTCTGGACGGAAAAGAACAGCAGCTGAGTGTTG 282 consensus_11510#3 -----------------------TAACTTCTGGACGGAAAAGACCAGCAGCTGAGTGTTG 119 consensus_11510#1 -----------------------TAACCTCTGGACGGAAAAGAACAGCTGCTGAGTGTTG 1152 **** *************** **** *********** consensus_11510#0 ACCTTCTTTTTTCGATCTGCTT-AACACTTTCAGTGACCTGCTGTTCAGAAGAATATGAT 1669 consensus_11510#2 ACCTTCTTTTTTCGATCTGCTTTAACACTTTCAGTGACCTGCTGTTCAGAAGAATATGAT 342 consensus_11510#3 ACCCTCTTTTTTCGATCTGCTTTAACCTTTCCANTGNCCTGCTGTTCAGAAGA-TATGAC 178 consensus_11510#1 ACCTTCTTTTTTGGAGCTGCTTTGACACATTCAGTGACCTGCTGTGAAGAAGAATATGAT 1212 *** ******** ** ****** ** * ** ** ******** ****** ***** consensus_11510#0 CCTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTTGCTGTGCTGAGCTTGTAACC 1729 consensus_11510#2 CCTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTTGCTGTGCTGAGCTTGTAACC 402 consensus_11510#3 CCTCTGAGCTTGTATCATCGTCTCTTTCTCTCA-TGTCTTGCTGTGCTGAGCTTGTAACC 237 consensus_11510#1 CTTCTGAGCTTGTATCATCGTCTCTTTCTCTCAATGTCTTGCTGTGCTGATCTTTTGG-- 1270 * ******************************* **************** *** * consensus_11510#0 AGCCATTAGAGAAGACAGTCCGAGATTAGGGCAAAAGGATAGCTCCATCCAAGAGAC--- 1786 consensus_11510#2 AGCCATTAGAGAAGACAGTCCGAGATTAGGGCAAAAGGATAGCTCCATCCAAGAGAC--- 459 consensus_11510#3 AGCC-TTAGAGAAGACAGTCCGAGATTAGGGCAAA-GGATAGCTCCATCCAAGAGAC--- 292 consensus_11510#1 GGTTTTC--------CTGTTCCTACTTAACCAACTTGCTTCCTTCTGTTTAAGACACTTG 1322 * * * ** * *** * * * ** * **** ** consensus_11510#0 ---GAAGGCCATTCAGTGAGACATTGCACACAAATAACCAATAAGGTT------------ 1831 consensus_11510#2 ---GAAGGCCATTCAGTGAGACATTGCACACAAATAACCAATAAGGGTCAGGTTCTTAGT 516 consensus_11510#3 ---GAAGGCCTTCCAGTGAGACATTGCACACAA-TAACCATAAGGGTCCAGGTTCTTAGT 348 consensus_11510#1 TGTGAAGTGAGTGCAATTTGACATGACCATCATGTAAATGTTCAGCTA------------ 1370 **** * ** * ***** * ** *** * consensus_11510#0 -----ATTGTGGCTCACAAA----CTTT----GTATCTTTTG-TATTAATGGCATTGTT- 1876 consensus_11510#2 GAGAGATGGTGAAACAGAAGGGAGCTCCAGTAGCATGTTTTGGTTCTTGAAGCCTTGCAC 576 consensus_11510#3 GAGAGATGGTGAAACAGAAGGGAGCCCCAGTAGCATGTTTTGGTTCTTG-AGCCTTGCAC 407 consensus_11510#1 -----AATGCTCTACATTTATGCAGTTT------ATTCTCTGGCAAAAAAAA-------- 1411 * * ** ** * ** consensus_11510#0 -TTTTTATTGGATTAATGGCAG------CAATAGCTATTA-----TATATAGTGTGCAAA 1924 consensus_11510#2 ATTTCTAGTGGAGTAACAGCAAAATAACCAGAAGCTTTGAAGAACTGCACTTTATGTAGT 636 consensus_11510#3 ATTTCTAGTGGAGTAACAGCAAAATAACCAGAAGCTTTGAAGAACTGCACTTTATGTAGT 467 consensus_11510#1 ------------------------------------------------------------ consensus_11510#0 CAGGAGG----------------------------------------------------- 1931 consensus_11510#2 CAGGATACATTATTTCATTCTATTCGATTCCAATTTGGCCAATTCATATGATCGACATTT 696 consensus_11510#3 CAGGATACATTATTTCATTCTATTCGATTCCAATTTGGCCAATTCATATGATCGACATTT 527 consensus_11510#1 ------------------------------------------------------------ consensus_11510#0 ------------------------------------------------------------ consensus_11510#2 TTGTCAGGAAATAAACAGCAAGCAATGTAGGGTTACTTACCANAAGTGATAC-------- 748 consensus_11510#3 TTGTCAGGAAATAAACAGCAAGCAATGTATAGTTACTTACCAAAGTGATACATGTTTGAG 587 consensus_11510#1 ------------------------------------------------------------ consensus_11510#0 ------------------------------------------------------------ consensus_11510#2 ------------------------------------------------------------ consensus_11510#3 AGATTCTTTCCATATGTTGGGTTCAAGATATAGAAAAATATTGTTCTTATGTGGCTTAAA 647 consensus_11510#1 ------------------------------------------------------------ consensus_11510#0 ------------------- consensus_11510#2 ------------------- consensus_11510#3 AAAAAAAAAAAAAAAAAAA 666 consensus_11510#1 ------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||