These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11514#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 952 fasta sequence [GATCAAGAGCTGGTAGTAGTACTCTTACCCTCTTGCATTAGCCTTTTCCTTCATCATACAATTTATCTTGAGAAATCAAGCTGTACCTCCACAAGTTGACATGTCGACGGTGACCTCGTGCACCTTCCTGAGCATCCGCCCCACGGTGAGCTCTGCTGGCAGTCTCTTATCCAAGAAACCGGCAGCGTTTGTTTCCCTTGCGTCGGAGAGGAAATCTAGGCCTCTTTCGCCGTGCTTCGCAATTAGCTCCAACAAACCAGGGGACCCAAAAATAGATGTGTCGCCATTCAGCATTTCACCCGTTGTTCTGGTGAACCCGGTGCCGGTGGACGGCGAGCGGTGGCAGGTGGCGGAGAACAAAGATGAAGTGAGCCTGTGGTTCGACGTGCCGGGGC-TTTCTCCGGCAGATCTGAT-CGTCGAGATCGACGAGGACGTGCTCGTCATCAAGAAGAAGAAGAAGGCGAGCCCAAAGAGCAACTACAATACTCCTACTTCCGGTG-CCATTGCAGATCATCAGGAGGCCACCG-CCGACGAGTTCAGCGGCGGCGGGATCTACGCGCGGCTGCTCCTCCCGG-CGGGGTACAGTAGAGAGGGTGTCCAGGCAAAGCTCACCTCCGGCGAGCTGAAGCTCACCATTGGCA-AGGTCAAGGAGAGTGTCCGCAGGAAGATCAATGTCGATATCTCTGTCA-AGTAGAATTCAGTGAGCTTCCATGGAATTCATATATGGTCATCTGTGATGAAGGATCGGAGCAACGGTGCAAGTTATATCTTGCCTAAGATTCTAGCTC--ATATATATCAATAACTGGTCCATGATCTGATCTCTCTCTCTCTATGTATACATCCTTTGCTGTTTTCCTAAGGTTGAGTATGCTTATGTATGCAAGCTTTATTCCGGCTGCAT-CCAAATAAATAAAATGATCATCTTTGTTGTGCTTTCAAAAAAAAAAAAAAA] [+] EMBL CF333533 [GATCAAGAGCTGGTAGTAGTACTCTTACCCTCTTGCATTAGCCTTTTCCTTCATCATACAATTTATCTTGAGAAATCAAGCTGTACCTCCACAAGTTGACATGTCGACGGTGACCTCGTGCACCTTCCTGAGCATCCGCCCCACGGTGAGCTCTGCTGGCAGTCTCTTATCCAAGAAACCGGCAGCGTTTGTTTCCCTTGCGTCGGAGAGGAAATCTAGGCCTCTTTCGCCGTGCTTCGCAATTAGCTCCAACAAACCAGGGGACCCAAAAATAGATGTGTCGCCATTCAGCATTTCACCCGTTGTTCTGGTGAACCCGGTGCCGGTGGACGGCGAGCGGTGGCAGGTGGCGGAGAACAAAGATGAAGTGAGCCTGTGGTTCGACGTGCCGGGGC TTTCTCCGGCAGATCTGAT CGTCGAGATCGACGAAGACGTGCTCGTCATCAAGAAGAAGAAGAAGGCGAGCCCAAAGAGCAACTACAATACTCCTACTTCCGGTG CCATTGCAGATCATCAGG ] [+] EMBL AK107162 [ TCAAGAGCTGGTAGTAGTACTCTTACCCTCTTGCATTAGCCTTTTCCTTCATCATACAATTTATCTTGAGAAATCAAGCTGTACCTCCACAAGTTGACATGTCGACGGTGACCTCGTGCACCTTCCTGAGCATCCGCCCCACGGTGAGCTCTGCTGGCAGTCTCTTATCCAAGAAACCGGCAGCGTTTGTTTCCCTTGCGTCGGAGAGGAAATCTAGGCCTCTTTCGCCGTGCTTCGCAATTAGCTCCAACAAACCAGGGGACCCAAAAATAGATGTGTCGCCATTCAGCATTTCACCCGTTGTTCTGGTGAACCCGGTGCCGGTGGACGGCGAGCGGTGGCAGGTGGCGGAGAACAAAGATGAAGTGAGCCTGTGGTTCGACGTGCCGGGGC TTTCTCCGGCAGATCTGAT CGTCGAGATCGACGAGGACGTGCTCGTCATCAAGAAGAAGAAGAAGGCGAGCCCAAAGAGCAACTACAATACTCCTACTTCCGGTG CCATTGCAGATCATCAGGAGGCCACCG CCGACGAGTTCAGCGGCGGCGGGATCTACGCGCGGCTGCTCCTCCCGG CGGGGTACAGTAGAGAGGGTGTCCAGGCAAAGCTCACCTCCGGCGAGCTGAAGCTCACCATTGGCA AGGTCAAGGAGAGTGTCCGCAGGAAGATCAATGTCGATATCTCTGTCA AGTAGAATTCAGTGAGCTTCCATGGAATTCATATATGGTCATCTGTGATGAAGGATCGGAGCAACGGTGCAAGTTATATCTTGCCTAAGATTCTAGCTC ATATATATCAATAACTGGTCCATGATCTGATCTCTCTCTCTCTATGTATACATCCTTTGCTGTTTTCCTAAGGTTGAGTATGCTTATGTATGCAAGCTTTATTCCGGCTGCAT CCAAATAAATAAAATGATCATCTTT ] [+] EMBL AU065634 [ AGTACTCTTACCCTCTTGCATTAGCCTTTTCCTTCATCATACAATTTATCTTGAGAAATCAAGCTGTACCTCCACAAGTTGACATGTCGACGGTGACCTCGTGCACCTTCCTGAGCATCCGCCCCACGGTGAGCTCTGCTGGCAGTCTCTTATCCAAGAAACCGGCAGCGTTTGTTTCCCTTGCGTCGGAGAGGAAATCTAGGCCTCTTTCGCCGTGCTTCGCAATTAGCTCCAACAAACCAGGGGACCCAAAAATAGATGTGTCGCCATTCAGCATTTNAACCGGTGTT ] [+] EMBL AU065726 [ GTACTCTTACCCTCTTGCATTAGCCTTTTCCTTCATCATACAATTTATCTTGAGAAATCAAGCTGTACCTCCACAAGTTGACATGTCGACGGTGACCTCGTGCACCTTCCTGAGCATCCGCCCCACGGTGAGCNCTGCTGGCAGTCTCTTATCCAAGAAACCGGCAGCGTTTGTTTCCCTTGCGTCGGAGAGGAAATCTAGGCCTCTTTCGCCGTGCTTCGCAATTAGCTCCAACAAACCAGGGGACCCAAAAATAGATGTGTCGCCATTCAGCATTTCACCCGTTGTTCTGGTGAACCCGGTG CGGTGGACGGCGA CGGTGG AAGTGGCGGAGA NAAGATGAAGT AGC ] [+] EMBL AU030171 [ AACAAAGATGAAGTGACCCTGTGGTTCGACGTGCCGGGGC TTTCTCCGGCAGATCTGAT CGTCGAGATCGACGAGGACGTGCTCGTCATCAAGAAGAAGAAGAAGGCGAGCCCAAAGAGCAACTACAATACTCCTACTTCCGGTG CCATTGCAGATCATCAGGAGGCCACCN CCGACGANTTCAGCGGCGGCGGGATCTACGCGCGGCTGNTCCTCCCGG CGGGGTACAGTAGAGAGGGTGTCCAGGCAAAGCTCACCTCCGGCGAGCTGAAGCTCACCATTGGCA AGGTCAAGGAGAGTGTCCGCAGGAAGATCAATGTCGATATCTCTGTCA AGTAGAATTCAGTGAGCTTCCATGGAATTCATATATGGTCATCTGTGATGAAGGATCGGAGCAACGGTGCAAGTTATATCTTGCCTAAGATTCTAGCTC ATATATATCAATAACTGGTCCATGATCTGATCTCTCTCTCTCTATGTATACATCCTTTGCTGTTTTCCTAAGGTTGAGTATGCTTATGTATGCAAGCTTTATTCCGGCTGCAT CCTAATAAATAAAATGATCATCTTTGTTGTGNTTTCAAAAAAAAAAAA ] [+] EMBL AU030507 [ ACTTCCCGGGGC TTTCTCCGGCAGATCTGATCCGNCGAGATCGACGAGGACGTGCTCGTCATCAAGANGAAGAAGAAGNCGAGCCCAAAGAGCAACTACAATACTCCTACTTCCGGTG CCATTGCAGATCATCAGGAGGCCACCG CCGACGNGTTCAGCGGCGGCGGGATCTACGCGCGGCTGCTCCTCCCGG CGGGGTACAGTAGAGAGGGTGTCCAGGCAAAGCTCACCTCCGGCGAGCTGAAGCTCACCATTGGCA AGGTCAAGGAGAGTGTCCGCAGGAAGATCAATGTCGATATCTCTGTCA AGTAGAATTCAGTGAGCTTCCATGGAATTCATATATGGTCATCTGTGATGAAGGATCGGAGCAACGGTGCAAGTTATATCTTGCCTAAGATTCTAGCTC ATATATATCAATAACTGGTCCATGATCTGATCTCTCTCTCTCTATGTATACATCCTTTGCTGTTTTCCTAAGGTTGAGTATGCTTATGTATGCAAGCTTTATTCCGGCTGCAT CCTAATAAATAAAATGATCATCTTTGTTGTGCTTTCAAAAAAAAAAAA ] [+] EMBL BI804873 [ cCCGGGGCTTTTCTCC GCAAATCTGAT C TCGAGATCGACGAGGACGTGCTCGTCATCAAGAAGAATAAGAA GCGAGCCCAAAGAGCAACT CCATACTCCTACTTCCGGTGCCCATTGCAGATCATCAGGAGCCCCCCG CCGACGAGTTCAGC GC GCGGGATCTACGCGCGGCTGCTCCTCCCGGCCGGGGTACCGTAGAGAGGGTGTCCA GC AAGCTCACCTCCGGCGAGCTGAAGCTCACCATTGGCACAGGTCAAGGAGAGTGTCCGCCAGCAGATCAAGGTCGATATCTCTGACACAGTAGAATTCAGTGAGCTTCCCTGGAATTCATATATGGTCATCTGTGATGAAGGATCGGAGCAACGGTGCCAGTTATATCTTGCCTAAGATTCTAGCTCATATATATATCCATAACTGGTCCCTGATCTGA TCTCTCTCTCTATATATACATCCTTTGCTGTTTTCCTAAGGTTGAGTATGCTTATGTATGCCAGCTTTATTCCGGCTGCATCCCAAATAAATAAAATGATCATCTTTGTTGTGCT AAAAAAAAAA ] [-] EMBL CF333534 [ G CCATTGCAGATCATCAGGAGGCCACCGCCCGACGAGTTCAGCGGCGGCGGGATTTACGCGCGGCCGCTCCTCCCGG CGGGGTACAGTAGAGAGGGTGTCCAGGCAAAGCTCACCTCCGGCGAGCTGAAGCTCACCATTGGCA AGGTCAAGGAGAGTGTCCGCAGGAAGATCAATGTCGATATCTCTGTCA AGTAGAATTCAGTGAGCTTCCATGGAATTCATATATGGTCATCTGTGATGAAGGATCGGAGCAACGGTGCAAGTTATATCTTGCCTAAGATTCTAGCTC ACATATATCAATAACTGGTCCATGATCTGATCTCTCTCTCTCTATGTATACATCCTTTGCTGTTTTCCTAAGGTTGAGTATGCTTATGTATGCAAGCTTTATTCCGGCTGCAT CCAAATAAATAAAATGATCATCTTTGTTGTGCTTTCAAAAAAAAAAAAAAA] [+] EMBL CA764491 [ CAGGAAGATCAATGTCGATATCTCTGTCA AGTAGAATTCAGTGAGCTTCCATGGAATTCATATATGGTCATCTGTGATGAAGGATCGGAGCAACAGTGCAAGT TATCTTGCCTAAGATTCTAGCTC ATACATATCAATAACTGGTCCATGATCTG T TCTCTATATATATACACATCCTTTGCTGTTTTCCTAAGGTTGAGTATGCTTATGTATGCAAGCTTTATTCTGGCTGCAT CCAAATAAATAAAATGATCATCTTTGTT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||