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Oryza sativa
cluster # 11517 cluster # 11517       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11517#0 length = 1523 sequences # 8  
consensus_11517#1 length = 660 sequences # 1  

consensusID : consensus_11517#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1523
fasta sequence
                              [CAATGGCGGACAAGCCGAGCCGCGGGCTGGTGCTCTACGCCGCGGGGCACGCGGCGCTGCTCCCTCCGGCGAGCGGCGGCGGCGGCGGAGCCGGAGGAGGAGGGGGAGGGAGCCACCTCGACGCCTTCGCGTCTCTCGCGTCATGTGGCTTCCTCTCCCTCCGCTCGCCCCCTCTCGCGAGTGGGGAGGAGAAGCGTGACAGCACGATTCTTGAGCTCGCGCAGCTGCTCGACGTGTACGATGATCTCTTCCCTGCTAAGACTGAGAAAACTGGTCAAGAGACTGCCCAGGTGGATCCACTGCAACTAGCAGTTCCCAAGCTATCTGAGAGGTTTATGGGGATCAGAGCTGCCATGGTCACCAATTGCCCCCTTGTTAGTTCTTTTGCAGCAAATCTTGGTTTTCATGTATCCGGGACTGAAGATTTAGTTGCACAATCTGGATCTTCCGCTGCTTCTAAGGAGGCTGGAATTATTTCCCAGGCGTTAAGTCTGCTTGGATTTTCAGAGGGGAATGTTCAGGAGACATCTGAATTTGATCTGGTGTTTCTGCATGTTGCCATGGAGAATACAAACAGCAAGTTGGGAAAATTGGGAATGAAGACTGATCTAAATCGGCTTGATAAATTAGTTGGTGCAATCATGGAAGCGGCGCCCATAAGTTCAGCTATCGCCTCCCGTATTCTTGTATCTGTGATGTTGAGCTATGGGTCTGCTGCTGAAAATAAGGATGAGTTTTCCATCTCAAAATCTTCGACTGAAATAGATTCTGACTTGAACTTGCTTCGCCCACGCCAGAGCTATACTATGAAAGCAGGAAATACATTGGATGATGTTAGGAATCATCATCCGATTCTGTTAGCACAGTGGCAGGAAGGA-GTTACACGCTCTGATTTGACCGAAGGGTTCTCTTTTGAGGAATTCATAAAGCGTGGTGGAAATCTTGCTATGCTTGCTGAACGCTTTCTACATG-AGGTGGCATTTAAGCTCTGGAAAGCTCCTAAATATGGAGCTTAAATCTGCCTGAGAAGATCCTCTCTAAATAAGGCGCGAAAATAATAAAAAGAGAATGATCTGTTGGGTTCCTTCTGTAAATGGGAACTGCAGATATTGCAAATAGATGAGTTTTGGAGGAGACGTACTCTCCCAAGGTTACAGAATTGATAAAGGAGATGCTGATAAACTGAAAACTAGTACGGTTTTTACTGAATTGATGGGAGATTTGTACTGTGCTTATCCGATGCTTTTGAACGGAGGAACTTTCCTGAGCTTATGTGAAAC-GCCGTTGCTGTTTGTGTAGAATCCATTTACTTGAAACTTTCTAACTTGGGAGCTGTTTCAGCACTGATATCAGTATCTGACTGATGCCATCCCTAGATCATTGTAATTTAATTCTTGATGCTAGCTAGCTGGTCCTAAAAATCGTGTGGCTGGAGCCTC-TTTTTTCTTTTAATAAGAACAGTACTACTAATAGAATTGATTCTAGAGAAAAAAAAAAGGCAGCCATCCAGCTCCCTATCACTA]

[+] EMBL AK069843             [CAATGGCGGACAAGCCGAGCCGCGGGCTGGTGCTCTACGCCGCGGGGCACGCGGCGCTGCTCCCTCCGGCGAGCGGCGGCGGCGGCGGAGCCGGAGGAGGAGGGGGAGGGAGCCACCTCGACGCCTTCGCGTCTCTCGCGTCATGTGGCTTCCTCTCCCTCCGCTCGCCCCCTCTCGCGAGTGGGGAGGAGAAGCGTGACAGCACGATTCTTGAGCTCGCGCAGCTGCTCGACGTGTACGATGATCTCTTCCCTGCTAAGACTGAGAAAACTGGTCAAGAGACTGCCCAGGTGGATCCACTGCAACTAGCAGTTCCCAAGCTATCTGAGAGGTTTATGGGGATCAGAGCTGCCATGGTCACCAATTGCCCCCTTGTTAGTTCTTTTGCAGCAAATCTTGGTTTTCATGTATCCGGGACTGAAGATTTAGTTGCACAATCTGGATCTTCCGCTGCTTCTAAGGAGGCTGGAATTATTTCCCAGGCGTTAAGTCTGCTTGGATTTTCAGAGGGGAATGTTCAGGAGACATCTGAATTTGATCTGGTGTTTCTGCATGTTGCCATGGAGAATACAAACAGCAAGTTGGGAAAACTGGGAATGAAGACTGATCTAAATCGGCTTGATAAATTAGTTGGTGCAATCATGGAAGCGGCGCCCATAAGTTCAGCTATCGCCTCCCGTATTCTTGTATCTGTGATGTTGAGCTATGGGTCTGCTGCTGAAAATAAGGATGAGTTTTCCATCTCAAAATCTTCGACTGAAATAGATTCTGACTTGAACTTGCTTCGCCCACGCCAGAGCTATACTATGAAAGCAGGAAATACATTGGATGATGTTAGGAATCATCATCCGATTCTGTTAGCACAGTGGCAGGAAGGA GTTACACGCTCTGATTTGACCGAAGGGTTCTCTTTTGAGGAATTCATAAAGCGTGGTGGAAATCTTGCTATGCTTGCTGAACGCTTTCTACATG AGGTGGCATTTAAGCTCTGGAAAGCTCCTAAATATGGAGCTTAAATCTGCCTGAGAAGATCCTCTCTAAATAAGGCGCGAAAATAATAAAAAGAGAATGATCTGTTGGGTTCCTTCTGTAAATGGGAACTGCAGATATTGCAAATAGATGAGTTTTGGAGGAGACGTACTCTCCCAAGGTTACAGAATTGATAAAGGAGATGCTGATAAACTGAAAACTAGTACGGTTTTTACTGAATTGATGGGAGATTTGTACTGTGCTTATCCGATGCTTTTGAACGGAGGAACTTTCCTGAGCTTATGTGAAAC GCCGTTGCTGTTTGTGTAGAATCCATTTACTTGAAACTTTCTAACTTGGGAGCTGT                                                                                                                                                                                            ]
[+] EMBL CF324780             [   gGGCGGACAAGCCGAGCCGCGGGCTGGTGCTCTACGCCGCGGGGCACGCGGCGCTGCTCCCTCCGGCGAGCGGCGGCGGCGGCGGAGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU065263             [                                                                                                                                                                                                                                                                                                          ACTGCAACTAGCAGTTCCCAAGCTATCTGAGAGGTTTATGGGGATCAGAGCTGCCATGGTCACCAATTGCCCCCTTGTTAGTTCTTTTGCAGCAAATCTTGGTTTTCATGTATCCGGGACTGAAGATTTAGTTGCACAATCTGGATCTTCCGCTGCTTCTAAGGAGGCTGGAATTATTTCCCAGGCGTTAAGTCTGCTTGGATTTTCAGAGGGGAATGTTCAGGAGACATCTGAATTTGATCTGGTGTTTCTGCATGTTGCCATGGAGAATACAAACAGCAAGTTGGGAAAATTGGGAATGAAGACTGATCTAAATCGGCTTGATAAATTAGTTGGTGCAATCATGGAAGCGGCGCCCATAAGTTCAGCTATCGCCTCCCGTATTCTTGTATCTGTGATGTTGAGCTATGGGTCTGCTGCTGAAAATAAGGATGAGTTTTCCATCTCAAAATCTTCGACTGAAATAGATTCTGACTTGAACTTGCTTCGCCCACGCCAGAGCTATACTATGAAAGCAGGAAATACATTGGATGATGTTAGGAATCATCATCCGATTCTGTTAGCACAGTGGCAGGAAGGANGTTACACGCTCTGATTTGACCGAA GGTTCTCTTTTGAGGAATTCATAAAGCGTGGTGGAAATCNTGCTATGCTTGCTGAANGCTTTCTACATGAAGGTGGCATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB658101             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTGATCTGGTGTTTCTGCATGTTGCCATGGAGAATACAAACAGCAAGTTGGGAAAATTGGGAATGAAGACTGATCTAAATCGGCTTGATAAATTAGTTGGTGCAATCATGGAAGCGGCGCCCATAAGTTCAGCTATCGCCTCCCGTATTCTTGTATCTGTGATGTTGAGCTATGGGTCTGCTGCTGAAAATAAGGATGAGTTTTCCATCTCAAAATCTTCGACTGAAATAGATTCTGACTTGAACTTGCTTCGCCCACGCCAGAGCTATACTATGAAAGCAGGAAATACATTGGATGATGTTAGGAATCATCATCCGATTCTGTTAGCACAGTGGCAGGAAGGA GTTACACGCTCTGATTTGACCGAAGGGTTCTCTTTTGAGGAATTCATAAAGCGTGGTGGAAATCTTGCTATGCTTGCTGAACGCTTTCTACATG AGGTGGCATTTAAGCTCTGGAAAGCTCCTAAATATGGAGCTTAAATCTGCCTGAGAAGATCCTCTCTAAATAAGGCGCGAAAATAATAAAAAGAGAATGATCTGTTGGGTTCCTTCTGTAAATGGGAACTGCAGATATTGCAAATAGATGAGTTTTGGAGGAGACGTACTCTCCCAAGGTTACAGAATTGATAAAGGAGATGCTGATAAACTGAAAACTAGTACGGTTTTTACTGAATTGATGGGAGATTTGTACTGTGCTTATCCGATGCTTTTGAACGGAGGAACTTTCCTGAGCTTATGTGAAACGGCCGTTGCTGTTTGTGTAGAATCCATTTAC TGAAAaaaaaaga                                                                                                                                                                                                        ]
[+] EMBL CB096357             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GATGTTGAGCTATGGGTCTGCTGCTGAAAATAAGGATGAGTTTTCCATCTCAAAATCTTCGACTGAAATAGATTCTGACTTGAACTTGCTTCGCCCACGCCAGAGCTATACTATGAAAGCAGGAAATACATTGGATGATGTTAGGAATCATCATCCGATTCTGTTAGCACAGTGGCAGGAAGGA GTTACACGCTCTGATTTGACCGAAGGGTTCTCTTTTGAGGAATTCATAAAGCGTGGTGGAAATCTTGCTATGCTTGCTGAACGCTTTCTACATG AGGTGGCATTTAAGCTCTGGAAAGCTCCTAAATATGGAGCTTAAATCTGCCTGAGAAGATCCTCTCTAAATAAGGCGCGAAAATAATAAAAAGAGAATGATCTGTTGGGTTCCTTCTGTAAATGGGAACTGCAGATATTGCAAATAGATGAGTTTTGGAGGAGACGTACTCTCCCAAGGTTACAGAATTGATAAAGGAGATGCTGATAAACTGAAAACTAGTACGGTTTTTACTGAATTGATGGGAGATTTGTACTGTGCTTATCCGATGCTTTTGAACGGAGGAACTTTCCTGAGCTTATGTGAAAC GCCGTTGCTGTTTGTGTA                                                                                                                                                                                                                                  ]
[+] EMBL AU095254             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AATAAGGCGCGAAAATAATAAAAAGAGAATGATCTGTTGGGTTCCTTCTGTAAATGGGAACTGCAGATATTGCAAATAGATGAGTTTTGGAGGAGACGTACTCTCCCAAGGTTACAGAATTGATAAAGGAGATGCTGATAAACTGAAAACTAGTACGGTTTTTACTGAATTGATGGGAGATTTGTACTGTGCTTATCCGATGCTTTTGAACGGAGGAACTTTCCTGAGCTTATGTGAAAC GCCGTTGCTGTTTGTGTAGAATCCATTTACTTGAAACTTTCTAACTTGGGAGCTGTTTCAGCACTGATATCAGTATCTGACTGATGCCATCCCTAGATCATTGTAATTTAATTCTTGATGCTAGCTAGCTGGTCCTAAAAATCGTGTGGCTGGAGCCTC TTTTTTCTTTTAATAAGAACAGTACTACTAATAGAATTGATTCTAGAGAAAAAA                              ]
[+] EMBL AA750445             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGAGAATGATCTGTTGGGTTCCTTCTGTAAATGGGAACTGCAGATATTGCAAATAGATGAGTTTTGGAGGAGACGTACTCTCCCAAGGTTACAGAATTGATAAAGGAGATGCTGATAAACTGAAAACTAGTACGGTTTTTACTGAATTGATGGGAGATTTGTACTGTGCTTATCCGATGCTTTTGAACGGAGGAACTTTCCTGAGCTTATGTGAAAC GCCGTTG                                                                                                                                                                                                                                             ]
[+] EMBL CA757667             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             gAAAGGAGATGCTGATAAACTGAAAACTAGTACGGTTTTTACTGAATTGATGGGAGATTTGTACTGTGCTTATCCGATGCTTTTGAACGGAGGAACTTTCCTGAGCTTATGTGAAAC GCCGTTGCTGTTTGTGTAGAATCCATTTACTTGAGACTTTCTAACTTGGGAGCTGTTTCAGCACTGATATCAGTATCTGACTGATGCCATCCCTAGATCATTGTAATTTAATTCTTGATGCTAGCTAGCTGGTCCTAAAAATCGTGTGGCTGGAGCCTCTTTTTTTCTTTTAATAAGAACAGTACTACTAATAGAATTGATTCTAGAGAATAATAAAAGGCAGCCATCCAGCTCCCTATCACTA]


>consensus_11517#0 CAATGGCGGACAAGCCGAGCCGCGGGCTGGTGCTCTACGCCGCGGGGCACGCGGCGCTGC TCCCTCCGGCGAGCGGCGGCGGCGGCGGAGCCGGAGGAGGAGGGGGAGGGAGCCACCTCG ACGCCTTCGCGTCTCTCGCGTCATGTGGCTTCCTCTCCCTCCGCTCGCCCCCTCTCGCGA GTGGGGAGGAGAAGCGTGACAGCACGATTCTTGAGCTCGCGCAGCTGCTCGACGTGTACG ATGATCTCTTCCCTGCTAAGACTGAGAAAACTGGTCAAGAGACTGCCCAGGTGGATCCAC TGCAACTAGCAGTTCCCAAGCTATCTGAGAGGTTTATGGGGATCAGAGCTGCCATGGTCA CCAATTGCCCCCTTGTTAGTTCTTTTGCAGCAAATCTTGGTTTTCATGTATCCGGGACTG AAGATTTAGTTGCACAATCTGGATCTTCCGCTGCTTCTAAGGAGGCTGGAATTATTTCCC AGGCGTTAAGTCTGCTTGGATTTTCAGAGGGGAATGTTCAGGAGACATCTGAATTTGATC TGGTGTTTCTGCATGTTGCCATGGAGAATACAAACAGCAAGTTGGGAAAATTGGGAATGA AGACTGATCTAAATCGGCTTGATAAATTAGTTGGTGCAATCATGGAAGCGGCGCCCATAA GTTCAGCTATCGCCTCCCGTATTCTTGTATCTGTGATGTTGAGCTATGGGTCTGCTGCTG AAAATAAGGATGAGTTTTCCATCTCAAAATCTTCGACTGAAATAGATTCTGACTTGAACT TGCTTCGCCCACGCCAGAGCTATACTATGAAAGCAGGAAATACATTGGATGATGTTAGGA ATCATCATCCGATTCTGTTAGCACAGTGGCAGGAAGGAGTTACACGCTCTGATTTGACCG AAGGGTTCTCTTTTGAGGAATTCATAAAGCGTGGTGGAAATCTTGCTATGCTTGCTGAAC GCTTTCTACATGAGGTGGCATTTAAGCTCTGGAAAGCTCCTAAATATGGAGCTTAAATCT GCCTGAGAAGATCCTCTCTAAATAAGGCGCGAAAATAATAAAAAGAGAATGATCTGTTGG GTTCCTTCTGTAAATGGGAACTGCAGATATTGCAAATAGATGAGTTTTGGAGGAGACGTA CTCTCCCAAGGTTACAGAATTGATAAAGGAGATGCTGATAAACTGAAAACTAGTACGGTT TTTACTGAATTGATGGGAGATTTGTACTGTGCTTATCCGATGCTTTTGAACGGAGGAACT TTCCTGAGCTTATGTGAAACGCCGTTGCTGTTTGTGTAGAATCCATTTACTTGAAACTTT CTAACTTGGGAGCTGTTTCAGCACTGATATCAGTATCTGACTGATGCCATCCCTAGATCA TTGTAATTTAATTCTTGATGCTAGCTAGCTGGTCCTAAAAATCGTGTGGCTGGAGCCTCT TTTTTCTTTTAATAAGAACAGTACTACTAATAGAATTGATTCTAGAGAAAAAAAAAAGGC AGCCATCCAGCTCCCTATCACTA



consensusID : consensus_11517#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 660
fasta sequence
                              [AATCCCTTGGATGAGTTAGATATCATCCGATTTCTGTGTANCACAGTGGCATGAAAGAGTTACACGCTCTGATTTGACCGAAAGGGTTCTCTTTGGAGGAATTCATNAAAGCGTGGTGGGAANTCTTGCTAATGCTTGGCTTGAACCGCTTTNCTAACAATGAGGGTGGCACTTTTAAGCTTCTGGAAAGCTCCCTATAATATTGGAGCTAAATCTGCCTGAGAAGATCCTCTCTAAATAAGGCGCGATATAATAATAAAGAGAATGATCTGTTTGGGTTCCTTCTGTAAATGGGAACTGCAGATATTTGCAAATAGATGAGTTTTGGAGGAGACGTACTCTCCCAAGGTTACAGAGATTGATAAAGGAGATGCTGATAAACTGAAAACTAGTACGGTTTTTACTGAATTGATGGGAGATTTGTACTGTGCTTATCCGAGTGCTTTTGAACGGAGGAACTTTCCTGAGCTTATGTGAAACGCCGTTGCTGTTTGTGTAGAATCCATTTACTTGAAACTTTCTAACTTGGGAGCTGTTTCAGCACTGATATCAGTATCTGGACNGANGCCATCCCTAGATCATTGTAATTTAATTCTTGATGCTAGCTAGCTGGTCGCNANAGATGCGGGTGGCTGGAGCCTCGTTTTTTCTTTTAAAAAA]

[+] EMBL BQ908383             [AATCCCTTGGATGAGTTAGATATCATCCGATTTCTGTGTANCACAGTGGCATGAAAGAGTTACACGCTCTGATTTGACCGAAAGGGTTCTCTTTGGAGGAATTCATNAAAGCGTGGTGGGAANTCTTGCTAATGCTTGGCTTGAACCGCTTTNCTAACAATGAGGGTGGCACTTTTAAGCTTCTGGAAAGCTCCCTATAATATTGGAGCTAAATCTGCCTGAGAAGATCCTCTCTAAATAAGGCGCGATATAATAATAAAGAGAATGATCTGTTTGGGTTCCTTCTGTAAATGGGAACTGCAGATATTTGCAAATAGATGAGTTTTGGAGGAGACGTACTCTCCCAAGGTTACAGAGATTGATAAAGGAGATGCTGATAAACTGAAAACTAGTACGGTTTTTACTGAATTGATGGGAGATTTGTACTGTGCTTATCCGAGTGCTTTTGAACGGAGGAACTTTCCTGAGCTTATGTGAAACGCCGTTGCTGTTTGTGTAGAATCCATTTACTTGAAACTTTCTAACTTGGGAGCTGTTTCAGCACTGATATCAGTATCTGGACNGANGCCATCCCTAGATCATTGTAATTTAATTCTTGATGCTAGCTAGCTGGTCGCNANAGATGCGGGTGGCTGGAGCCTCGTTTTTTCTTTTAAAAAA]


>consensus_11517#1 AATCCCTTGGATGAGTTAGATATCATCCGATTTCTGTGTANCACAGTGGCATGAAAGAGT TACACGCTCTGATTTGACCGAAAGGGTTCTCTTTGGAGGAATTCATNAAAGCGTGGTGGG AANTCTTGCTAATGCTTGGCTTGAACCGCTTTNCTAACAATGAGGGTGGCACTTTTAAGC TTCTGGAAAGCTCCCTATAATATTGGAGCTAAATCTGCCTGAGAAGATCCTCTCTAAATA AGGCGCGATATAATAATAAAGAGAATGATCTGTTTGGGTTCCTTCTGTAAATGGGAACTG CAGATATTTGCAAATAGATGAGTTTTGGAGGAGACGTACTCTCCCAAGGTTACAGAGATT GATAAAGGAGATGCTGATAAACTGAAAACTAGTACGGTTTTTACTGAATTGATGGGAGAT TTGTACTGTGCTTATCCGAGTGCTTTTGAACGGAGGAACTTTCCTGAGCTTATGTGAAAC GCCGTTGCTGTTTGTGTAGAATCCATTTACTTGAAACTTTCTAACTTGGGAGCTGTTTCA GCACTGATATCAGTATCTGGACNGANGCCATCCCTAGATCATTGTAATTTAATTCTTGAT GCTAGCTAGCTGGTCGCNANAGATGCGGGTGGCTGGAGCCTCGTTTTTTCTTTTAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11517#0      CAATGGCGGACAAGCCGAGCCGCGGGCTGGTGCTCTACGCCGCGGGGCACGCGGCGCTGC 60
consensus_11517#1      ------------------------------------------------------------
                                                                                   

consensus_11517#0      TCCCTCCGGCGAGCGGCGGCGGCGGCGGAGCCGGAGGAGGAGGGGGAGGGAGCCACCTCG 120
consensus_11517#1      ------------------------------------------------------------
                                                                                   

consensus_11517#0      ACGCCTTCGCGTCTCTCGCGTCATGTGGCTTCCTCTCCCTCCGCTCGCCCCCTCTCGCGA 180
consensus_11517#1      ------------------------------------------------------------
                                                                                   

consensus_11517#0      GTGGGGAGGAGAAGCGTGACAGCACGATTCTTGAGCTCGCGCAGCTGCTCGACGTGTACG 240
consensus_11517#1      ------------------------------------------------------------
                                                                                   

consensus_11517#0      ATGATCTCTTCCCTGCTAAGACTGAGAAAACTGGTCAAGAGACTGCCCAGGTGGATCCAC 300
consensus_11517#1      ------------------------------------------------------------
                                                                                   

consensus_11517#0      TGCAACTAGCAGTTCCCAAGCTATCTGAGAGGTTTATGGGGATCAGAGCTGCCATGGTCA 360
consensus_11517#1      ------------------------------------------------------------
                                                                                   

consensus_11517#0      CCAATTGCCCCCTTGTTAGTTCTTTTGCAGCAAATCTTGGTTTTCATGTATCCGGGACTG 420
consensus_11517#1      ------------------------------------------------------------
                                                                                   

consensus_11517#0      AAGATTTAGTTGCACAATCTGGATCTTCCGCTGCTTCTAAGGAGGCTGGAATTATTTCCC 480
consensus_11517#1      ------------------------------------------------------------
                                                                                   

consensus_11517#0      AGGCGTTAAGTCTGCTTGGATTTTCAGAGGGGAATGTTCAGGAGACATCTGAATTTGATC 540
consensus_11517#1      ------------------------------------------------------------
                                                                                   

consensus_11517#0      TGGTGTTTCTGCATGTTGCCATGGAGAATACAAACAGCAAGTTGGGAAAATTGGGAATGA 600
consensus_11517#1      ------------------------------------------------------------
                                                                                   

consensus_11517#0      AGACTGATCTAAATCGGCTTGATAAATTAGTTGGTGCAATCATGGAAGCGGCGCCCATAA 660
consensus_11517#1      ------------------------------------------------------------
                                                                                   

consensus_11517#0      GTTCAGCTATCGCCTCCCGTATTCTTGTATCTGTGATGTTGAGCTATGGGTCTGCTGCTG 720
consensus_11517#1      ------------------------------------------------------------
                                                                                   

consensus_11517#0      AAAATAAGGATGAGTTTTCCATCTCAAAATCTTCGACTGAAATAGATTCTGACTTGAACT 780
consensus_11517#1      ------------------------------------------------------------
                                                                                   

consensus_11517#0      TGCTTCGCCCACGCCAGAGCTATACTATGAAAGCAGGAAATACATTGGATGATGTTAGGA 840
consensus_11517#1      --------------------------------------AATCCCTTGGATGA-GTTAGAT 21
                                                             *** * ******** *****  

consensus_11517#0      ATCATCATCCGATTCTGT-TAGCACAGTGGCAGGAAGGAGTTACACGCTCTGATTTGACC 899
consensus_11517#1      ATCATC--CGATTTCTGTGTANCACAGTGGCATGAAAGAGTTACACGCTCTGATTTGACC 79
                       ******  *   ****** ** ********** *** ***********************

consensus_11517#0      GAA-GGGTTCTCTTTTGAGGAATTCATAAA-GCGTGGTGG-AAATCTTGCTA-TGCTTG- 954
consensus_11517#1      GAAAGGGTTCTCTTTGGAGGAATTCATNAAAGCGTGGTGGGAANTCTTGCTAATGCTTGG 139
                       *** *********** *********** ** ********* ** ******** ****** 

consensus_11517#0      -CTGAAC-GCTTTCTACATGA----GGTGGCA--TTTAAGCT-CTGGAAAGCTCCTAA-- 1003
consensus_11517#1      CTTGAACCGCTTTNCTAACAATGAGGGTGGCACTTTTAAGCTTCTGGAAAGCTCCCTATA 199
                         ***** *****    *  *    *******  ******** ************  *  

consensus_11517#0      ATATGGAGCTTAAATCTGCCTGAGAAGATCCTCTCTAAATAAGGCGCGAAAATAATAA-A 1062
consensus_11517#1      ATATTGGAGCTAAATCTGCCTGAGAAGATCCTCTCTAAATAAGGCGCGATA-TAATAATA 258
                       **** *    *************************************** * ****** *

consensus_11517#0      AAGAGAATGATCTGTT-GGGTTCCTTCTGTAAATGGGAACTGCAGATATT-GCAAATAGA 1120
consensus_11517#1      AAGAGAATGATCTGTTTGGGTTCCTTCTGTAAATGGGAACTGCAGATATTTGCAAATAGA 318
                       **************** ********************************* *********

consensus_11517#0      TGAGTTTTGGAGGAGACGTACTCTCCCAAGGTTACAGA-ATTGATAAAGGAGATGCTGAT 1179
consensus_11517#1      TGAGTTTTGGAGGAGACGTACTCTCCCAAGGTTACAGAGATTGATAAAGGAGATGCTGAT 378
                       ************************************** *********************

consensus_11517#0      AAACTGAAAACTAGTACGGTTTTTACTGAATTGATGGGAGATTTGTACTGTGCTTATCCG 1239
consensus_11517#1      AAACTGAAAACTAGTACGGTTTTTACTGAATTGATGGGAGATTTGTACTGTGCTTATCCG 438
                       ************************************************************

consensus_11517#0      A-TGCTTTTGAACGGAGGAACTTTCCTGAGCTTATGTGAAACGCCGTTGCTGTTTGTGTA 1298
consensus_11517#1      AGTGCTTTTGAACGGAGGAACTTTCCTGAGCTTATGTGAAACGCCGTTGCTGTTTGTGTA 498
                       * **********************************************************

consensus_11517#0      GAATCCATTTACTTGAAACTTTCTAACTTGGGAGCTGTTTCAGCACTGATATCAGTATCT 1358
consensus_11517#1      GAATCCATTTACTTGAAACTTTCTAACTTGGGAGCTGTTTCAGCACTGATATCAGTATCT 558
                       ************************************************************

consensus_11517#0      G-ACTGATGCCATCCCTAGATCATTGTAATTTAATTCTTGATGCTAGCTAGCTGGTC-CT 1416
consensus_11517#1      GGACNGANGCCATCCCTAGATCATTGTAATTTAATTCTTGATGCTAGCTAGCTGGTCGCN 618
                       * ** ** ************************************************* * 

consensus_11517#0      AAAAAT-CGTGTGGCTGGAGCCTC-TTTTTTCTTTTAATAAGAACAGTACTACTAATAGA 1474
consensus_11517#1      ANAGATGCGGGTGGCTGGAGCCTCGTTTTTTCTTTTAAAAAA------------------ 660
                       * * ** ** ************** ************* **                   

consensus_11517#0      ATTGATTCTAGAGAAAAAAAAAAGGCAGCCATCCAGCTCCCTATCACTA 1523
consensus_11517#1      -------------------------------------------------
                                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)