cluster # 11518

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Oryza sativa
cluster # 11518 cluster # 11518 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11518#0 length = 2702 sequences # 6

consensus_11518#1 length = 1805 sequences # 2
consensus_11518#2 length = 821 sequences # 1

consensusID : consensus_11518#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2702
fasta sequence

                              [CCCTTCGTTCGTGCGCTTCCTCGGTCGCCGGCGATGGCGATGGCGATGGCGCCGGCGGTGGTCTCGGGCGAGAGGCTCGTCGTGTTCCTCTTCGTCGCCCGCGTCGCGCTCGCGGCGCCGGCCCAGCTCGCCGCCCCGCTCGCGGTCCTCGCCGCGGCCGCCCTCGCCGTCGAGCTCGCCGTGGATGGCTCCGCCTCCGCGTCCTCATCGCCGCTCCGCCGGTTCAGGACCAGGCCGGGTGCTTCATCAGGCATACTTCTTGGTGCCACTACTCTGCCTAGTGTCATGCTTTCACGGTTAATTCAACTTTATAGGGTCTTACTAGCAGATCCTAATGGACGTGAAGAATATGCATACCTTGAAATGCAGTACTGGGCAGTATCTGTTAGCTGCCTTGGCATGTTATCATTTTTTGTTTGGCATCTACGGCAGTCTCCCAGCAATGGAAATTCTATAGCTTCGAAATACGGCTTGTTGCTCATCATTTTATATCCCCTGGCATACTTGTTCCACCTTTTACTGAAGACTGATGGAGGTCTGCTGGTGATGAGTAATTTGGTGTATTTGCTGTGTCATGGAGTGGCTGCTGTGATCTTAATCCAGCATATTCTAGAGAAGTTCCCTTCATGTTCATCTTTTGGTTTGTACCTGAAGTCTAAGATGTAGTTAGATCTTTATTTTTTTGTTTATATCTGACTGCATATGTTTAGACTTTAGAGCTATCCATACGATTGCTAGTTATCCTACCAGTTTTCCATGCAGGCATAGTGCATTATATCTACACTGTTCATTTTTTAAAATTTAAATTCAGCTAATTTGTGTGGTTCCTATTGGCCGATGCAATGTATATGTCTCCTTTTCATCATGACTTGAAGCTATTGCTTTTTTTTAACTTATCTTTACATTTTCTGTGAACTTAGGGGAGGCCATTTTGGTCTCAAGTGGTCTTGTTCTTTACTGTGGTGATATGCTGGCTCATACTCTTTCAAAGATGGAGTTCTCCGTATCATCAGAAGCATTTATTCGCGCACCTGGAACTCGAAGCGAGATAGGCACAGTTATTCAGGGGGTTTTGCTTGGTCTTTTTCTTCTCCCCTTGTTATACAAAAGCTCCCTTCAAGTTTTGGCTTACTGTAGAAAACTGGAGAGTCAAAGAACACAAACAGTTGAGGAATGCACACAGAAGAGAATTGACTGTGGTGTATTTTATGTTTCATTGTTGGTAGCACTATTGTTGTTAGTGCCATCATGGACGCGTCTTATTCAAGGTTTTGAAGTGCATCCATTTGTTTGGGTTTTTAACTATATTTTCACCGATTCACGTGAACGGCTTGCTTTATGCGCATACTGGATATTTGTGATATATGTATCAATTAGAAGGTTCTACAGTATATCAAAACAAAGCAAAACGGAGAGGATTCTTTTGCGCAAGTATTACCATCTCGTTGCTGTCCTAATTTTCTCTCCTGCAGTAATATTTCAGCCTGATTTCTTGGACTTAGCATTTGGTGCAGCATTTGCCGTTTTCTTAATATTGGAGATGGTTCGAGTTTGGGAAATATACCCTCTTGGGCATATTGTGCATCAGTTCATGAGTGCCTTCACTGATCATCGCGATTCGGAAATTCTAATTGTTAGTCATTTCTCACTCTTGCTGGGATGTGCACTTCCTAAATGGATGTCATCAGGATTCAATGACCGACCTCTTACACCATTTGCTGGAATTCTCAGCTTGGGTATTGGTGATACCATGGCATCAATGATAGGTTATAAGTATGGTGTCCTAAGATGGAGCAAGACAGGAAAGAAAACAATTGAGGGCACAGCAGCAGGCATAACTTCTGTATTAGCAGCCTGCTCAATCCTGCTGTCACTCTTAGCTTCAAGTGGATACATACTTTCACAGCATTGGATATCACTTTTGGTAGCTGTGACATTGAGCGGTTTATTGGAAGCATATACAGCCCAACTCGACAACGCTTTCATACCCCTTGTCTTCTATAGCCTCCTATGTCTATAGGAGCAACCAATTGTACATCAAAC--TACCTTGAGGCCCTATTCTTACCATTACTAATATCTAGTGACTAGTGCAGTACAGTATAGGTATAGCCCTTCG-AATTTTTTTTTTAAATCCTCTTATTGGTCGCATTCTCTGTATTCCTGGACCGAGAAATTGTGTCCATTACTAAAAAGTTGAGTTTAGGTTTAGGAAATAAAGATGAAAATATGAAAGGTTGTTTAGTGAATCCTTCAGTAGAGAGCATCTTTGGTATGATAGACTTCTGAGCCTATCTGG--------AGGCATCAATGTATCATGGAAGGTATGTTGTCTTTCAGAACCAGAACTTCTTCTGCAGGTGGTGAGACCTATTTCACCCCACAACTCCACAAGCAGTTGGGCAAGAATAGCAAGCTGAGAGTAAAGCCATATGCTGCAAGGAGCCTGAAATACGGAGACTTGGTTCAGAATTAATG------TATATGGTACCTTATTTCCATGGACATGCGAAGTGTAATTAGTTGTAGTAGCTAATCTCCTGTAAGTTTTGCGTCATCACTGTACGGAGTAAAAGATCACTACTCAGATTGCAACCGCGCATTGATGTAAATTTTGTTCTTGACCTGAGAAAAAATGAAATCGAAGTAAGCAAAGCTGCAAATTAATGTTCTCCTATTATGAGATTGGCAGGTTTGCGATGTTTGAGTTA]

[+] EMBL AK067901             [CCCTTCGTTCGTGCGCTTCCTCGGTCGCCGGCGATGGCGATGGCGATGGCGCCGGCGGTGGTCTCGGGCGAGAGGCTCGTCGTGTTCCTCTTCGTCGCCCGCGTCGCGCTCGCGGCGCCGGCCCAGCTCGCCGCCCCGCTCGCGGTCCTCGCCGCGGCCGCCCTCGCCGTCGAGCTCGCCGTGGATGGCTCCGCCTCCGCGTCCTCATCGCCGCTCCGCCGGTTCAGGACCAGGCCGGGTGCTTCATCAGGCATACTTCTTGGTGCCACTACTCTGCCTAGTGTCATGCTTTCACGGTTAATTCAACTTTATAGGGTCTTACTAGCAGATCCTAATGGACGTGAAGAATATGCATACCTTGAAATGCAGTACTGGGCAGTATCTGTTAGCTGCCTTGGCATGTTATCATTTTTTGTTTGGCATCTACGGCAGTCTCCCAGCAATGGAAATTCTATAGCTTCGAAATACGGCTTGTTGCTCATCATTTTATATCCCCTGGCATACTTGTTCCACCTTTTACTGAAGACTGATGGAGGTCTGCTGGTGATGAGTAATTTGGTGTATTTGCTGTGTCATGGAGTGGCTGCTGTGATCTTAATCCAGCATATTCTAGAGAAGTTCCCTTCATGTTCATCTTTTGGTTTGTACCTGAAGTCTAAGATGTAGTTAGATCTTTATTTTTTTGTTTATATCTGACTGCATATGTTTAGACTTTAGAGCTATCCATACGATTGCTAGTTATCCTACCAGTTTTCCATGCAGGCATAGTGCATTATATCTACACTGTTCATTTTTTAAAATTTAAATTCAGCTAATTTGTGTGGTTCCTATTGGCCGATGCAATGTATATGTCTCCTTTTCATCATGACTTGAAGCTATTGCTTTTTTTTAACTTATCTTTACATTTTCTGTGAACTTAGGGGAGGCCATTTTGGTCTCAAGTGGTCTTGTTCTTTACTGTGGTGATATGCTGGCTCATACTCTTTCAAAGATGGAGTTCTCCGTATCATCAGAAGCATTTATTCGCGCACCTGGAACTCGAAGCGAGATAGGCACAGTTATTCAGGGGGTTTTGCTTGGTCTTTTTCTTCTCCCCTTGTTATACAAAAGCTCCCTTCAAGTTTTGGCTTACTGTAGAAAACTGGAGAGTCAAAGAACACAAACAGTTGAGGAATGCACACAGAAGAGAATTGACTGTGGTGTATTTTATGTTTCATTGTTGGTAGCACTATTGTTGTTAGTGCCATCATGGACGCGTCTTATTCAAGGTTTTGAAGTGCATCCATTTGTTTGGGTTTTTAACTATATTTTCACCGATTCACGTGAACGGCTTGCTTTATGCGCATACTGGATATTTGTGATATATGTATCAATTAGAAGGTTCTACAGTATATCAAAACAAAGCAAAACGGAGAGGATTCTTTTGCGCAAGTATTACCATCTCGTTGCTGTCCTAATTTTCTCTCCTGCAGTAATATTTCAGCCTGATTTCTTGGACTTAGCATTTGGTGCAGCATTTGCCGTTTTCTTAATATTGGAGATGGTTCGAGTTTGGGAAATATACCCTCTTGGGCATATTGTGCATCAGTTCATGAGTGCCTTCACTGATCATCGCGATTCGGAAATTCTAATTGTTAGTCATTTCTCACTCTTGCTGGGATGTGCACTTCCTAAATGGATGTCATCAGGATTCAATGACCGACCTCTTACACCATTTGCTGGAATTCTCAGCTTGGGTATTGGTGATACCATGGCATCAATGATAGGTTATAAGTATGGTGTCCTAAGATGGAGCAAGACAGGAAAGAAAACAATTGAGGGCACAGCAGCAGGCATAACTTCTGTATTAGCAGCCTGCTCAATCCTGCTGTCACTCTTAGCTTCAAGTGGATACATACTTTCACAGCATTGGATATCACTTTTGGTAGCTGTGACATTGAGCGGTTTATTGGAAGCATATACAGCCCAACTCGACAACGCTTTCATACCCCTTGTCTTCTATAGCCTCCTATGTCTATAGGAGCAACCAATTGTACATCAAAC  TACCTTGAGGCCCTATTCTTACCATTACTAATATCTAGTGACTAGTGCAGTACAGTATAGGTATAGCCCTTCG AATTTTTTTTTTAAATCCTCTTATTGGTCGCATTCTCTGTATTCCTGGACCGAGAAATTGTGTCCATTACTAAAAAGTTGAGTTTAGGTTTAGGAAATAAAGATGAAAATATGAAAGGTTGTTTAGTGAATCCTTCAGTAGAGAGCATCTTTGGTATGATAGACTTCTGAGCCTATCTGG        AGGCATCAATGTATCATGGAAGGTATGTTGTCTTTCAGAACCAGAACTTCTTCTGCAGGTGGTGAGACCTATTTCACCCCACAACTCCACAAGCAGTTGGGCAAGAATAGCAAGCTGAGAGTAAAGCCATATGCTGCAAGGAGCCTGAAATACGGAGACTTGGTTCAGAATTAATG      TATATGGTACCTTATTTCCATGGACATGCGAAGTGTAATTAGTTGTAGTAGCTAATCTCCTGTAAGTTTTGCGTCATCACTGTACGGAGTAAAAGATCACTACTCAGATTGCAACCGCGCATTGATGTAAATTTTGTTCTTGACCTGAGAAAAAATGAAATCGAAGTAAGCAAAGCTGCAA                                                 ]
[+] EMBL CF306204             [                                                                                                                                                                                                                                                                                                                                                         GAATATGCATACCTTGAAATGCAGTACTGGGCAGTATCTGTTAGCTGCCTCAGCATGTTAGCATTTTTTGTTTGGCATCTACGGCAGTCTCCCAGCAATGGAAATTCTATAGCTTCGAAATACGGCTTGTTGCTCATCATTTTATATCCCCTGGCATACTTGTTTCACCTTTTACTGAAGACTGATGGAGGTCTGCTGGTGATGAGTAATTTGGTGTATTTGCTGTGTCATGGAGTGGCTGCTGTGATCTTAATCCAGCATATTCTAGAGAAGTTCCCTTCATGTTCATCTTTTGGTTTGTACCTGAAGTCTAAGATGTAGAT CTTCTTT TTTTTTTGTTTATATCAGACTGCATATGTTTAGACTTTAGAGCTATCCATACGATTGCTAGTTATCCTACCAG TTTCCATGCAGGCATGGTGCATTATGTCTACACTGTTCATTTTTTAAAATTTAAATTCAGCTAATTTGTGTGGTTCCTATTGGCCGATGCAATGTATATGTCTCCTTTTCATCATGACTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB627254             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGGGACATATACCCTCTTGGGCATATTGTGCATCAGTTCATGAGTGCCTTCACTGATCATCGCGATTCGGAAATTCTACTTGTTAGTCATTTCTCACTCTTGCTGGGATGTGCACTTCCTAAATGGATGTCATCAGGATTCAATGACCGACCTCTTACACCATTTGCTGGAATTCTCAGCTTGGGTATTGGTGATACCATGGCATCAATGATAGGTTATAAGTATGGTGTCCTAAGATGGAGCAAGACAGGAAAGAAAACAATTGAGGGCACAGCAGCAGGCATAACTTCTGTATTAGCAGCCTGCTCAATCCTGCTGTCACTCTTAGCTTCAAGTGGATACATACTTTCACAGCATTGGATATCACTTTTGGTAGCTGTGACATTGAGCGGTTTATTGGAAGCATATACAGCCCAACTCGACAACGCTTTCATACCCCTTGTCTTCTATAGCCTCCTATGTCTATAGGAGCAACCAATTGTACATCAAAC  TACCTTGAGGCCCTATTCTTACCATTACTAATATCTAGTGACTAGTGCAGTACAGTATAGGTATAGCCCTTCG AATTTTTTTTTTAAATCCTCTTATTGGTCGCATTCTCTGTATTCCTGGACCGAGAAATTGTGTCCATTACTAAAAAGTTGAGTTTAGGTTTAGGAAATAAAGATGAAAATATGAAAGGTTGTTTAGTGAATCCTTCAGTAGAGAGCATCTTTGGTATGATAGACTTCTGAGCCTATCTGG        AGGCATCAATGTATCATGGAAGGTATGTTGTCTTTCAGAACCAGA                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB630737             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATAACTTCTGTATTAGCAGCCTGCTCAATCCTGCTGTCACTCTTAGCTTCAAGTGGATACATACTTTCACAGCATTGGATATCACTTTTGGTAGCTGTGACATTGAGCGGTTTATTGGAAGCATATACAGCCCAACTCGACAACGCTTTCATACCCCTTGTCTTCTATAGCCTCCTATGTCTATAGGAGCAACCAATTGTACATCAAAC  TACCTTGAGGCCCTATTCTTACCATTACTAATATCTAGTGACTAGTGCAGTACAGTATAGGTATAGCCCTTCG AATTTTTTTTTTAAATCCTCTTATTGGTCGCATTCTCTGTATTCCTGGACCGAGAAATTGTGTCCATTACTAAAAAGTTGAGTTTAGGTTTAGGAAATAAAGATGAAAATATGAAAGGTTGTTTAGTGAATCCTTCAGTAGAGAGCATCTTTGGTATGATAGACTTCTGAGCCTATCTGG        AGGCATCAATGTATCATGGAAGGTATGTTGTCTTTCAGAACCAGAACTTCTTCTGCAGGTGGTGAGACCTATTTCACCCCACAACTCCACAAGCAGTTGGGCAAGAATAGCAAGCTGAGAGTAAAGCCATATGCTGCAAGGAGCCTGAAATACGGAGACTTGGTTCAGAATTAATG      TATATGGTACCTTATTTCCATGGACATGCGAAGTGTAATTAGTTGTAGTAGCTAATCTCCTGTAAGTTTGGCGTCATCACTGTACGGAGTAAAAGATCACTACTCAGATTGCAACCGCGCATTGATGTAAATTTTGTTCTTGACCTGAGAAAAAATGAAATCGAAGTAAG                                                            ]
[-] EMBL CB626844             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CACTTTTGGTAGCTGTGACATTGAGCGGTTTATTGGAAGCATATACAGCCCAACTCGACAACGCTTTCATACCCCTTGTCTTCTATAGCCTCCTATGTCTATAGGAGCAACCAGTTGTACATCAAACTATACCTTGAGGCCCTATTCTTACCATGACT  TATCTAGTGACTAGTGCAGTACAGTATAGGTATAGCCCTTCGAAATTTTTTTTTAAAATCCTCTTATTGGTCGCATTCTCTGTATTCCTGGACCGAGAAATTGTGTCCATTACTAGAAGGTTGAGTTTAGGTTTAGGAAATAAAGATGAAAATATGAAAGGTTGTTTAGTGAATCCTTCAGTAGAGAGCATCTTTGGTATGATAGACTTCTGAGCCTATCTGGAGGCAACAAGGCATCAATGTATCATGGAAGGTATGTTGTCTTTCAGAACTAGAACTTCTTCTGCAGGTGGTGATACCTGTTTCACCCCACAACTCCACAAGCAGTTGGGCAAGAATAGCAAGCTGAGAGTAAAGCCATATGCTGCAAGGAGCCTGAAATACGGAGACTTGGTTCAGAATTAATGTATATATATATGCTACCTTATTTCCATGGACATGCGAAGGGTAATTAGTTGTAGTAGCTAATCTCCTGTAAGTTTTGCGTCATCACTGTACGGAGTAAAAGATAACTACTCAGATTGCAACCGCGCATTGATGTAAATTTTGTTCTTGACCTGAGAAAAAATGAAATCGAAGTAAGCAAAGCTGCAAATTAATGTTCTCCTATTATGAGATTGGCAGGTTTGCGATGTTTGAGTTA]
[-] EMBL CB627255             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CAGCCCAACTCGACAACGCTTTCATACCCCTTGTCTTCTATAGCCTCCTATGTCTATAGGAGCAACCAATTGTACATCAAAC  TCCCTTGAGGCCCTATTCTTACCATTACTAATATCTAGTGACTAGTGCAGTCCAGTATAGGTATAGCCCTTCG AATTTTTTTTTTAAATCCTCTTATTGGTCGCATTCTCTGTATTCCTGGCCCGAGAAATTGTGTCCATTACTAAAAAGTTGAGTTTAGGTTTAGGAAATAAAGATGAAAATATGAAAGGTTGTTTAGTGAATCCTTCAGTAGAGAGCATCTTTGGTATGATAGACTTCTGAGCCTATCTGG        AGGCATCAATGTATCATGGAAGGTATGTTGTCTTTCAGAACCAGAACTTTTTTTGCAGGTGGTGAGACCTATTTCACCCCACAACTCCACAAGCAGTTGGGCAAGAATAGCAAGCTGAGAGTAAAGCCATATGCTGCAAGGAGCCTGAAATACGGAGACTTGGTTCAGAATTAATG      TATATGGTCCCTTATTTCCATGGACATGCGAAGTGTAATTAGTTGTAGTAGCTAATCTCCTGTAAGTTTTGCGTCATCACTGTACGGAGTAAAAGATCACTACTCAGATTGCACCCGCGCATTGATGTAAATTTTGTTCTTGCCCTGAGAAAAAAAAGAATCGAAGTAAG                                                            ]




>consensus_11518#0
CCCTTCGTTCGTGCGCTTCCTCGGTCGCCGGCGATGGCGATGGCGATGGCGCCGGCGGTG
GTCTCGGGCGAGAGGCTCGTCGTGTTCCTCTTCGTCGCCCGCGTCGCGCTCGCGGCGCCG
GCCCAGCTCGCCGCCCCGCTCGCGGTCCTCGCCGCGGCCGCCCTCGCCGTCGAGCTCGCC
GTGGATGGCTCCGCCTCCGCGTCCTCATCGCCGCTCCGCCGGTTCAGGACCAGGCCGGGT
GCTTCATCAGGCATACTTCTTGGTGCCACTACTCTGCCTAGTGTCATGCTTTCACGGTTA
ATTCAACTTTATAGGGTCTTACTAGCAGATCCTAATGGACGTGAAGAATATGCATACCTT
GAAATGCAGTACTGGGCAGTATCTGTTAGCTGCCTTGGCATGTTATCATTTTTTGTTTGG
CATCTACGGCAGTCTCCCAGCAATGGAAATTCTATAGCTTCGAAATACGGCTTGTTGCTC
ATCATTTTATATCCCCTGGCATACTTGTTCCACCTTTTACTGAAGACTGATGGAGGTCTG
CTGGTGATGAGTAATTTGGTGTATTTGCTGTGTCATGGAGTGGCTGCTGTGATCTTAATC
CAGCATATTCTAGAGAAGTTCCCTTCATGTTCATCTTTTGGTTTGTACCTGAAGTCTAAG
ATGTAGTTAGATCTTTATTTTTTTGTTTATATCTGACTGCATATGTTTAGACTTTAGAGC
TATCCATACGATTGCTAGTTATCCTACCAGTTTTCCATGCAGGCATAGTGCATTATATCT
ACACTGTTCATTTTTTAAAATTTAAATTCAGCTAATTTGTGTGGTTCCTATTGGCCGATG
CAATGTATATGTCTCCTTTTCATCATGACTTGAAGCTATTGCTTTTTTTTAACTTATCTT
TACATTTTCTGTGAACTTAGGGGAGGCCATTTTGGTCTCAAGTGGTCTTGTTCTTTACTG
TGGTGATATGCTGGCTCATACTCTTTCAAAGATGGAGTTCTCCGTATCATCAGAAGCATT
TATTCGCGCACCTGGAACTCGAAGCGAGATAGGCACAGTTATTCAGGGGGTTTTGCTTGG
TCTTTTTCTTCTCCCCTTGTTATACAAAAGCTCCCTTCAAGTTTTGGCTTACTGTAGAAA
ACTGGAGAGTCAAAGAACACAAACAGTTGAGGAATGCACACAGAAGAGAATTGACTGTGG
TGTATTTTATGTTTCATTGTTGGTAGCACTATTGTTGTTAGTGCCATCATGGACGCGTCT
TATTCAAGGTTTTGAAGTGCATCCATTTGTTTGGGTTTTTAACTATATTTTCACCGATTC
ACGTGAACGGCTTGCTTTATGCGCATACTGGATATTTGTGATATATGTATCAATTAGAAG
GTTCTACAGTATATCAAAACAAAGCAAAACGGAGAGGATTCTTTTGCGCAAGTATTACCA
TCTCGTTGCTGTCCTAATTTTCTCTCCTGCAGTAATATTTCAGCCTGATTTCTTGGACTT
AGCATTTGGTGCAGCATTTGCCGTTTTCTTAATATTGGAGATGGTTCGAGTTTGGGAAAT
ATACCCTCTTGGGCATATTGTGCATCAGTTCATGAGTGCCTTCACTGATCATCGCGATTC
GGAAATTCTAATTGTTAGTCATTTCTCACTCTTGCTGGGATGTGCACTTCCTAAATGGAT
GTCATCAGGATTCAATGACCGACCTCTTACACCATTTGCTGGAATTCTCAGCTTGGGTAT
TGGTGATACCATGGCATCAATGATAGGTTATAAGTATGGTGTCCTAAGATGGAGCAAGAC
AGGAAAGAAAACAATTGAGGGCACAGCAGCAGGCATAACTTCTGTATTAGCAGCCTGCTC
AATCCTGCTGTCACTCTTAGCTTCAAGTGGATACATACTTTCACAGCATTGGATATCACT
TTTGGTAGCTGTGACATTGAGCGGTTTATTGGAAGCATATACAGCCCAACTCGACAACGC
TTTCATACCCCTTGTCTTCTATAGCCTCCTATGTCTATAGGAGCAACCAATTGTACATCA
AACTACCTTGAGGCCCTATTCTTACCATTACTAATATCTAGTGACTAGTGCAGTACAGTA
TAGGTATAGCCCTTCGAATTTTTTTTTTAAATCCTCTTATTGGTCGCATTCTCTGTATTC
CTGGACCGAGAAATTGTGTCCATTACTAAAAAGTTGAGTTTAGGTTTAGGAAATAAAGAT
GAAAATATGAAAGGTTGTTTAGTGAATCCTTCAGTAGAGAGCATCTTTGGTATGATAGAC
TTCTGAGCCTATCTGGAGGCATCAATGTATCATGGAAGGTATGTTGTCTTTCAGAACCAG
AACTTCTTCTGCAGGTGGTGAGACCTATTTCACCCCACAACTCCACAAGCAGTTGGGCAA
GAATAGCAAGCTGAGAGTAAAGCCATATGCTGCAAGGAGCCTGAAATACGGAGACTTGGT
TCAGAATTAATGTATATGGTACCTTATTTCCATGGACATGCGAAGTGTAATTAGTTGTAG
TAGCTAATCTCCTGTAAGTTTTGCGTCATCACTGTACGGAGTAAAAGATCACTACTCAGA
TTGCAACCGCGCATTGATGTAAATTTTGTTCTTGACCTGAGAAAAAATGAAATCGAAGTA
AGCAAAGCTGCAAATTAATGTTCTCCTATTATGAGATTGGCAGGTTTGCGATGTTTGAGT
TA

consensusID : consensus_11518#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1805
fasta sequence

                              [CAGTTGAGGAATGCACACAGAAGAGAATTGACTGTGGTGTATTTTATGTTTCATTGTTGGTAGCACTATTGTTGTTAGTGCCATCATGGACGCGTCTTATTCAAGGTTTTGAAGTGCATCCATTTGTTTGGTGAGCATATAAGTTTGCATTTCATTGGAAGGGCATAAAAGCATGCACTCTGTTAGTCAAATATTGAAAAATTTCTTCCTGTGTTGCTTCTAAACCTTGTGCATTTTTGTACGTATTGAATTTTGGTTCACTTAATGGTTTATATTCACAGGGTTTTTAACTATATTTTCACCGATTCACGTGAACGGCTTGCTTTATGCGCATACTGGATATTTGTGATATATGTATCAATTAGAAGGTTCTACAGTATATCAAAACAAAGCAAAACGGAGAGGATTCTTTTGCGCAAGTATTACCATCTCGTTGCTGTCCTAATTTTCTCTCCTGCAGTAATATTTCGGCCTGATTTCTTGGACTTAGCATTTGGTGCAGCATTTGCCGTTTTCTTAATATTGGAGATGGTTCGAGTTTGGGAAATATACCCTCTTGGGCATATTGTGCATCAGTTCATGAGTGCCTTCACTGATCATCGCGATTCGGAAATTCTAATTGTTAGTCATTTCTCACTCTTGCTGGGATGTGCACTTCCTAAATGGATGTCATCAGGATTCAATGACCGACCTCTTACACCATTTGCTGGAATTCTCAGCTTGGGTATTGGTGATACCATGGTAGGTTCTATGTCCAGTGCGTGATCAGTTAATATTTTCTTATGTTAGCTGCGTTCAGTATGATGAATTCTCTTGTTTTACCTAGGCATCAATGATAGGTTATAAGTATGGTGTCCTAAGATGGAGCAAGACAGGAAGTGAGTTTAATTTCCATTATTATTTATTCCATGATTGATAATTGATCTCTTATGCACATACTTTTGAAATGTTAGAGAAAACAATTGAGGGCACAGCAGCAGGCATAACTTCTGTATTAGCAGCCTGCTCAATCCTGCTGTCACTCTTAGCTTCAAGTGGATACATACTTTCACAGCATTGGATATCACTTTTGGTAGCTGTGACATTGAGCGGTTTATTGGAAGCATATACAGCCCAACTCGACAACGCTTTCATACCCCTTGTCTTCTATAGCCTCCTATGTCTATAGGAGCAACCAATTGTACATCAAACTACCTTGAGGCCCTATTCTTACCATTACTAATATCTAGTGACTAGTGCAGTACAGTATAGGTATAGCCCTTCGAATTTTTTTTTTAAATCCTCTTATTGGTCGCATTCTCTGTATTCCTGGACCGAGAAATTGTGTCCATCACTAAAAAGTTGAGTTTAGGTTTAGGAAATAAAGATGAAAATATGAAAGGTTGTTTAGTGAATCCTTCAGTAGAGAGCATCTTTGGTATGATAGACTTCTGAGCCTATCTGGAGGCATCAATGTATCATGGAAGGTATGTTGTCTTTCAGAACCAGAACTTCTTCTGCAGGTGGTGAGACCTATTTCACCCCACAACTCCACAAGCAGTTGGGCAAGAATAGCAAGCTGAGAGTAAAGCCATATGCTGCAAGGAGCCTGAAATACGGAGACTTGGTTCAGAATTAGTGTATATGGTACCTTATTTCCATGGACATGCGAAGTGTAATTAGTTGTAGTAGCTAATCTCCTGTAAGTTTTGCGTCATCACTGTACGGAGTAAAAGATCACTACTCAGATTGCAGCCGCGCATTGATGTAAATTTTGTTCTTGACCTGAGAAAAAATGAAATCGAAGTAAGCAAAGCTGCAAATTA]

[+] EMBL AK060195             [CAGTTGAGGAATGCACACAGAAGAGAATTGACTGTGGTGTATTTTATGTTTCATTGTTGGTAGCACTATTGTTGTTAGTGCCATCATGGACGCGTCTTATTCAAGGTTTTGAAGTGCATCCATTTGTTTGGTGAGCATATAAGTTTGCATTTCATTGGAAGGGCATAAAAGCATGCACTCTGTTAGTCAAATATTGAAAAATTTCTTCCTGTGTTGCTTCTAAACCTTGTGCATTTTTGTACGTATTGAATTTTGGTTCACTTAATGGTTTATATTCACAGGGTTTTTAACTATATTTTCACCGATTCACGTGAACGGCTTGCTTTATGCGCATACTGGATATTTGTGATATATGTATCAATTAGAAGGTTCTACAGTATATCAAAACAAAGCAAAACGGAGAGGATTCTTTTGCGCAAGTATTACCATCTCGTTGCTGTCCTAATTTTCTCTCCTGCAGTAATATTTCGGCCTGATTTCTTGGACTTAGCATTTGGTGCAGCATTTGCCGTTTTCTTAATATTGGAGATGGTTCGAGTTTGGGAAATATACCCTCTTGGGCATATTGTGCATCAGTTCATGAGTGCCTTCACTGATCATCGCGATTCGGAAATTCTAATTGTTAGTCATTTCTCACTCTTGCTGGGATGTGCACTTCCTAAATGGATGTCATCAGGATTCAATGACCGACCTCTTACACCATTTGCTGGAATTCTCAGCTTGGGTATTGGTGATACCATGGTAGGTTCTATGTCCAGTGCGTGATCAGTTAATATTTTCTTATGTTAGCTGCGTTCAGTATGATGAATTCTCTTGTTTTACCTAGGCATCAATGATAGGTTATAAGTATGGTGTCCTAAGATGGAGCAAGACAGGAAGTGAGTTTAATTTCCATTATTATTTATTCCATGATTGATAATTGATCTCTTATGCACATACTTTTGAAATGTTAGAGAAAACAATTGAGGGCACAGCAGCAGGCATAACTTCTGTATTAGCAGCCTGCTCAATCCTGCTGTCACTCTTAGCTTCAAGTGGATACATACTTTCACAGCATTGGATATCACTTTTGGTAGCTGTGACATTGAGCGGTTTATTGGAAGCATATACAGCCCAACTCGACAACGCTTTCATACCCCTTGTCTTCTATAGCCTCCTATGTCTATAGGAGCAACCAATTGTACATCAAACTACCTTGAGGCCCTATTCTTACCATTACTAATATCTAGTGACTAGTGCAGTACAGTATAGGTATAGCCCTTCGAATTTTTTTTTTAAATCCTCTTATTGGTCGCATTCTCTGTATTCCTGGACCGAGAAATTGTGTCCATCACTAAAAAGTTGAGTTTAGGTTTAGGAAATAAAGATGAAAATATGAAAGGTTGTTTAGTGAATCCTTCAGTAGAGAGCATCTTTGGTATGATAGACTTCTGAGCCTATCTGGAGGCATCAATGTATCATGGAAGGTATGTTGTCTTTCAGAACCAGAACTTCTTCTGCAGGTGGTGAGACCTATTTCACCCCACAACTCCACAAGCAGTTGGGCAAGAATAGCAAGCTGAGAGTAAAGCCATATGCTGCAAGGAGCCTGAAATACGGAGACTTGGTTCAGAATTAGTGTATATGGTACCTTATTTCCATGGACATGCGAAGTGTAATTAGTTGTAGTAGCTAATCTCCTGTAAGTTTTGCGTCATCACTGTACGGAGTAAAAGATCACTACTCAGATTGCAGCCGCGCATTGATGTAAATTTTGTTCTTGACCTGAGAAAAAATGAAATCGAAGTAAGCAAAGCTGCAAATTA]
[+] EMBL CF310226             [                                             ATGTTTCATTGTTGGTAGCACTATTGTTGTTAGTGCCATCATGGACGCGTCTTATTCAAGGTTTTGAAGTGCATCCATTTGTTTGGTGAGCATATAAGTTTGCATTTCATTGGAAGGGCATAAAAGCATGCACTCTGTTAGTCAAATATTGAAAAATTTCTTCCTGTGTTGCTTCTAAACCTTGTGCATTTTTGTACGTATTGAATTTTGGTTCACTTAATGGTTTATATTCACAGGGTTTTTAACTATATTTTCACCGATTCACGTGAACGGCTTGCTTTATGCGCATACTGGATATTTGTGATATATGTATCAATTAGAAGGTTCTACAGTATATCAAAACAAAGCAAAACGGAGAGGATTCTTTTGCGCAAGTATTACCATCTCGTTGCTGTCCTAATTTTCTCTCCTGCAGTAATATTTCAGCCTGATTTCTTGGACTTAGCATTTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]




>consensus_11518#1
CAGTTGAGGAATGCACACAGAAGAGAATTGACTGTGGTGTATTTTATGTTTCATTGTTGG
TAGCACTATTGTTGTTAGTGCCATCATGGACGCGTCTTATTCAAGGTTTTGAAGTGCATC
CATTTGTTTGGTGAGCATATAAGTTTGCATTTCATTGGAAGGGCATAAAAGCATGCACTC
TGTTAGTCAAATATTGAAAAATTTCTTCCTGTGTTGCTTCTAAACCTTGTGCATTTTTGT
ACGTATTGAATTTTGGTTCACTTAATGGTTTATATTCACAGGGTTTTTAACTATATTTTC
ACCGATTCACGTGAACGGCTTGCTTTATGCGCATACTGGATATTTGTGATATATGTATCA
ATTAGAAGGTTCTACAGTATATCAAAACAAAGCAAAACGGAGAGGATTCTTTTGCGCAAG
TATTACCATCTCGTTGCTGTCCTAATTTTCTCTCCTGCAGTAATATTTCGGCCTGATTTC
TTGGACTTAGCATTTGGTGCAGCATTTGCCGTTTTCTTAATATTGGAGATGGTTCGAGTT
TGGGAAATATACCCTCTTGGGCATATTGTGCATCAGTTCATGAGTGCCTTCACTGATCAT
CGCGATTCGGAAATTCTAATTGTTAGTCATTTCTCACTCTTGCTGGGATGTGCACTTCCT
AAATGGATGTCATCAGGATTCAATGACCGACCTCTTACACCATTTGCTGGAATTCTCAGC
TTGGGTATTGGTGATACCATGGTAGGTTCTATGTCCAGTGCGTGATCAGTTAATATTTTC
TTATGTTAGCTGCGTTCAGTATGATGAATTCTCTTGTTTTACCTAGGCATCAATGATAGG
TTATAAGTATGGTGTCCTAAGATGGAGCAAGACAGGAAGTGAGTTTAATTTCCATTATTA
TTTATTCCATGATTGATAATTGATCTCTTATGCACATACTTTTGAAATGTTAGAGAAAAC
AATTGAGGGCACAGCAGCAGGCATAACTTCTGTATTAGCAGCCTGCTCAATCCTGCTGTC
ACTCTTAGCTTCAAGTGGATACATACTTTCACAGCATTGGATATCACTTTTGGTAGCTGT
GACATTGAGCGGTTTATTGGAAGCATATACAGCCCAACTCGACAACGCTTTCATACCCCT
TGTCTTCTATAGCCTCCTATGTCTATAGGAGCAACCAATTGTACATCAAACTACCTTGAG
GCCCTATTCTTACCATTACTAATATCTAGTGACTAGTGCAGTACAGTATAGGTATAGCCC
TTCGAATTTTTTTTTTAAATCCTCTTATTGGTCGCATTCTCTGTATTCCTGGACCGAGAA
ATTGTGTCCATCACTAAAAAGTTGAGTTTAGGTTTAGGAAATAAAGATGAAAATATGAAA
GGTTGTTTAGTGAATCCTTCAGTAGAGAGCATCTTTGGTATGATAGACTTCTGAGCCTAT
CTGGAGGCATCAATGTATCATGGAAGGTATGTTGTCTTTCAGAACCAGAACTTCTTCTGC
AGGTGGTGAGACCTATTTCACCCCACAACTCCACAAGCAGTTGGGCAAGAATAGCAAGCT
GAGAGTAAAGCCATATGCTGCAAGGAGCCTGAAATACGGAGACTTGGTTCAGAATTAGTG
TATATGGTACCTTATTTCCATGGACATGCGAAGTGTAATTAGTTGTAGTAGCTAATCTCC
TGTAAGTTTTGCGTCATCACTGTACGGAGTAAAAGATCACTACTCAGATTGCAGCCGCGC
ATTGATGTAAATTTTGTTCTTGACCTGAGAAAAAATGAAATCGAAGTAAGCAAAGCTGCA
AATTA

consensusID : consensus_11518#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 821
fasta sequence

                              [CCCAGCACTGGAAATTCTATAGCTTCGAAATACGGCTTGTTGCTCATCATTTTATATCCCCTGGCATACTTGTTCCACCTTTTACTGAAGACTGATGGAGGTCTGCTGGTGATGAGTAATTTGGGGTATTTGCTGTGTCATGGAGTGGCTGCTGTGATCTTAATCCAGCATATTCTAGAGAAGTTCCCTTCATGTTCATCTTTTGGTTTGTACCTGAAGTCTAAGATGGGAGGCCATTTTGGTCTCAAGTGGTCTTGTTTCTTTACTGTGGTGATATGCTGGCTCATACTCTTTCAAAGATGGAGTTCTCCGTATCATCAGAAGCATTTATTCGCGCACCTGGAACTCGAAACGAGATAGGCACAGTTATTCAGGGGGTTTTGCTTGGTCTTTTTCTTCTCCCCTTGTTATACAAAAGCTCCCTTCAAGTTTTGGCTTACTGTAGAAAACTGGAGAGTCAAAGAACACAAACAGTTGAGGAATGCACACAGAAGAGAATTGACTGTGGTGTATTTTATGTTTCATTGTTGATAGCACTATTGTTGTTAGTGCCATCATGGACGCGTCTTATTCAAGGTTTTGAAGTGCATCCATTTGTTTGGGTTTTTAACTATATTTTCACCGATTCACGTGAACGGCTTGCTTTATGCGCATACTGGATATTTGTGATATATGTATCAATTAGAAGGTTCTACAGTATATCAAAACAAAGCAAAACGGAGAGGATTCTTTTGCGCAAGTATTACCATCTCGTTGCTGTCCTAATTTTCTCTCCTGCAGTAATATTTCAGCCTGATTTCTTGGACTTGGCATTTGGTGCA]

[+] EMBL CB626843             [CCCAGCACTGGAAATTCTATAGCTTCGAAATACGGCTTGTTGCTCATCATTTTATATCCCCTGGCATACTTGTTCCACCTTTTACTGAAGACTGATGGAGGTCTGCTGGTGATGAGTAATTTGGGGTATTTGCTGTGTCATGGAGTGGCTGCTGTGATCTTAATCCAGCATATTCTAGAGAAGTTCCCTTCATGTTCATCTTTTGGTTTGTACCTGAAGTCTAAGATGGGAGGCCATTTTGGTCTCAAGTGGTCTTGTTTCTTTACTGTGGTGATATGCTGGCTCATACTCTTTCAAAGATGGAGTTCTCCGTATCATCAGAAGCATTTATTCGCGCACCTGGAACTCGAAACGAGATAGGCACAGTTATTCAGGGGGTTTTGCTTGGTCTTTTTCTTCTCCCCTTGTTATACAAAAGCTCCCTTCAAGTTTTGGCTTACTGTAGAAAACTGGAGAGTCAAAGAACACAAACAGTTGAGGAATGCACACAGAAGAGAATTGACTGTGGTGTATTTTATGTTTCATTGTTGATAGCACTATTGTTGTTAGTGCCATCATGGACGCGTCTTATTCAAGGTTTTGAAGTGCATCCATTTGTTTGGGTTTTTAACTATATTTTCACCGATTCACGTGAACGGCTTGCTTTATGCGCATACTGGATATTTGTGATATATGTATCAATTAGAAGGTTCTACAGTATATCAAAACAAAGCAAAACGGAGAGGATTCTTTTGCGCAAGTATTACCATCTCGTTGCTGTCCTAATTTTCTCTCCTGCAGTAATATTTCAGCCTGATTTCTTGGACTTGGCATTTGGTGCA]




>consensus_11518#2
CCCAGCACTGGAAATTCTATAGCTTCGAAATACGGCTTGTTGCTCATCATTTTATATCCC
CTGGCATACTTGTTCCACCTTTTACTGAAGACTGATGGAGGTCTGCTGGTGATGAGTAAT
TTGGGGTATTTGCTGTGTCATGGAGTGGCTGCTGTGATCTTAATCCAGCATATTCTAGAG
AAGTTCCCTTCATGTTCATCTTTTGGTTTGTACCTGAAGTCTAAGATGGGAGGCCATTTT
GGTCTCAAGTGGTCTTGTTTCTTTACTGTGGTGATATGCTGGCTCATACTCTTTCAAAGA
TGGAGTTCTCCGTATCATCAGAAGCATTTATTCGCGCACCTGGAACTCGAAACGAGATAG
GCACAGTTATTCAGGGGGTTTTGCTTGGTCTTTTTCTTCTCCCCTTGTTATACAAAAGCT
CCCTTCAAGTTTTGGCTTACTGTAGAAAACTGGAGAGTCAAAGAACACAAACAGTTGAGG
AATGCACACAGAAGAGAATTGACTGTGGTGTATTTTATGTTTCATTGTTGATAGCACTAT
TGTTGTTAGTGCCATCATGGACGCGTCTTATTCAAGGTTTTGAAGTGCATCCATTTGTTT
GGGTTTTTAACTATATTTTCACCGATTCACGTGAACGGCTTGCTTTATGCGCATACTGGA
TATTTGTGATATATGTATCAATTAGAAGGTTCTACAGTATATCAAAACAAAGCAAAACGG
AGAGGATTCTTTTGCGCAAGTATTACCATCTCGTTGCTGTCCTAATTTTCTCTCCTGCAG
TAATATTTCAGCCTGATTTCTTGGACTTGGCATTTGGTGCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11518#0      CCCTTCGTTCGTGCGCTTCCTCGGTCGCCGGCGATGGCGATGGCGATGGCGCCGGCGGTG 60
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      ------------------------------------------------------------
                                                                                   

consensus_11518#0      GTCTCGGGCGAGAGGCTCGTCGTGTTCCTCTTCGTCGCCCGCGTCGCGCTCGCGGCGCCG 120
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      ------------------------------------------------------------
                                                                                   

consensus_11518#0      GCCCAGCTCGCCGCCCCGCTCGCGGTCCTCGCCGCGGCCGCCCTCGCCGTCGAGCTCGCC 180
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      ------------------------------------------------------------
                                                                                   

consensus_11518#0      GTGGATGGCTCCGCCTCCGCGTCCTCATCGCCGCTCCGCCGGTTCAGGACCAGGCCGGGT 240
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      ------------------------------------CAGTTGAGGAATGCACACAGAAGA 24
                                                                                   

consensus_11518#0      GCTTCATCAGGCATACTTCTTGGTGCCACTACTCTGCCTAGTGTCATGCTTTCACGGTTA 300
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      GAATTGACTGTGGTGTATTTTATGTTTCATTGTTGGTAGCACTATTGTTGTTAGTGCCAT 84
                                                                                   

consensus_11518#0      ATTCAACTTTATAGGGTCTTACTAGCAGATCCTAATGGACGTGAAGAATATGCATACCTT 360
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      CATGGACGCGTCTTATTCAAGGTTTTGAAGTGCATCCATTTGTTTGGTGAGCATATAAGT 144
                                                                                   

consensus_11518#0      GAAATGCAGTACTGGGCAGTATCTGTTAGCTGCCTTGGCATGTTATCATTTTTTGTTTGG 420
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      TTGCATTTCATTGGAAGGGCATAAAAGCATGCACTCTGTTAGTCAAATATTGAAAAATTT 204
                                                                                   

consensus_11518#0      CATCTACGGCAGTCTCCCAGCAATG-GAAATTCTATA-GCTTCGAAATACGGCTTGTTGC 478
consensus_11518#2      ---------------CCCAGCACTG-GAAATTCTATA-GCTTCGAAATACGGCTTGTTGC 43
consensus_11518#1      CTTCCTGTGTTGCTTCTAAACCTTGTGCATTTTTGTACGTATTGAATTTTGGTTCA---C 261
                                      *  * *  ** * * ** * ** *  * *** *  ** *     *

consensus_11518#0      TCATCATTTTATATCCCCTGGCATACTTG------TTCCACCTTTTACTGAAGACTGATG 532
consensus_11518#2      TCATCATTTTATATCCCCTGGCATACTTG------TTCCACCTTTTACTGAAGACTGATG 97
consensus_11518#1      TTAATGGTTTATATTCACAGGGTTTTTAACTATATTTTCACCGATTCACGTGAACGGCTT 321
                       * *    ******* * * **  *  *        ** ****  **   *   ** * * 

consensus_11518#0      GAGGTCTGCTGGTGATGAGTAATTTGGTGTATTTGCTGTGTCATGGAGTGGCTGCTGTGA 592
consensus_11518#2      GAGGTCTGCTGGTGATGAGTAATTTGGGGTATTTGCTGTGTCATGGAGTGGCTGCTGTGA 157
consensus_11518#1      GCTTTATGCGCATACTGGATA-TTTGTGATATATGTATCAATTAGAAGGTTCTACAGT-A 379
                       *   * ***   *  **  ** ****   *** **         * **   ** * ** *

consensus_11518#0      TCTTAATCCAGCATATTCTAGAGAAGTTCCCTTCATGT-----TCATCTTTTGGTTTGTA 647
consensus_11518#2      TCTTAATCCAGCATATTCTAGAGAAGTTCCCTTCATGT-----TCATCTTTTGGTTTGTA 212
consensus_11518#1      TATCAAAACAAAGCAAAACGGAGAGGATTCTTTTGCGCAAGTATTACCATCTCGTTGCTG 439
                       * * **  **    *     **** * * * **   *      * * * * * ***  * 

consensus_11518#0      CCTGAAGT-------CTAAGATGTAGTTAGATCTTTATTTTTTTGTTTATATCTGACTGC 700
consensus_11518#2      CCTGAAGT-------CTAAGATG------------------------------------- 228
consensus_11518#1      TCCTAATTTTCTCTCCTGCAGTAATATTTCGGCCTGATTTCTTGGACTTAGCATTTGGTG 499
                        *  ** *       **    *                                      

consensus_11518#0      ATATGTTTAGACTTTAGAGCTATCCATACGATTGCTAGTTATCCTACCAGTTTTCCATGC 760
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      CAGCATTTGCCGTTTTCTTAATATTGGAGATGGTTCGAGTTTGGGAAATATACCCTCTTG 559
                                                                                   

consensus_11518#0      AGGCATAGTGCATTATATCTACACTGTTCATTTTTTAAAATTTAAATTCAGCTAATTTGT 820
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      GGCATATTGTGCATCAGTTCATGAGTGCCTTCACTGATCATCGCGATTCGGAAATTCTAA 619
                                                                                   

consensus_11518#0      GTGGTTCCTATTGGCCGATGCAATGTATATGTCTCCTTTTCATCATGACTTGAAGCTATT 880
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      TTGTTAGTCATTTCTCACTCTTGCTGGGATGTGCACTTCCTAAATGGATGTCATCAGGAT 679
                                                                                   

consensus_11518#0      GCTTTTTTTTAACTTATCTTTACATTTTCTGTGAACTTAGGGGAGGCCATTTTGGTCTCA 940
consensus_11518#2      -----------------------------------------GGAGGCCATTTTGGTCTCA 247
consensus_11518#1      TCAATGACCGACCTCTTACACCATTTGCTGGAATTCTCAGCTTGGGTATTGGTGATACCA 739
                                                                   **   *  ** *  **

consensus_11518#0      AGT--GGTCTTGTT-CTTTACTGTGGTGAT---ATGCTGGCTCATACT-----CTTTCA- 988
consensus_11518#2      AGT--GGTCTTGTTTCTTTACTGTGGTGAT---ATGCTGGCTCATACT-----CTTTCA- 296
consensus_11518#1      TGGTAGGTTCTATGTCCAGTGCGTGATCAGTTAATATTTTCTTATGTTAGCTGCGTTCAG 799
                        *   ***  * *  *      *** * *    **  *  ** **  *     * **** 

consensus_11518#0      -AAGATGGAGTTCTCCGTATCATCAGAAGCATTTAT--TCGCGCACCTGGAACTCGAAGC 1045
consensus_11518#2      -AAGATGGAGTTCTCCGTATCATCAGAAGCATTTAT--TCGCGCACCTGGAACTCGAAAC 353
consensus_11518#1      TATGATGAATTCTCTTGTTTTACCT-AGGCATCAATGATAGGTTATAAGTATGGTGTCCT 858
                        * **** * *     ** * * *  * ****  **  * *   *   * *    *    

consensus_11518#0      GAGATAGGCACAGTTATTCAGGGGGTTTTGCTTGGTCTTTTTCTTCTCCCCTTGTTATAC 1105
consensus_11518#2      GAGATAGGCACAGTTATTCAGGGGGTTTTGCTTGGTCTTTTTCTTCTCCCCTTGTTATAC 413
consensus_11518#1      AAGATGGAGCAAGACAGGAAGTGAGTTTAATTTCCATTATTATTTATTCCATGATTG-AT 917
                        **** *    **  *   ** * ****   **    * **  ** * ** *  **  * 

consensus_11518#0      AAAAGCTCCCTT---CA---AGTTTTGGCTTACTGTAGAAAAC--TGGAGAGTCAAAGAA 1157
consensus_11518#2      AAAAGCTCCCTT---CA---AGTTTTGGCTTACTGTAGAAAAC--TGGAGAGTCAAAGAA 465
consensus_11518#1      AATTGATCTCTTATGCACATACTTTTGAAATGTTAGAGAAAACAATTGAGGGCACAGCAG 977
                       **  * ** ***   **   * *****   *  *  *******  * *** *   *  * 

consensus_11518#0      CACAAACAGTTGAGGAATGCACACAGAAGAGAATTGACTGTGGTGTATTTTATGTTTCAT 1217
consensus_11518#2      CACAAACAGTTGAGGAATGCACACAGAAGAGAATTGACTGTGGTGTATTTTATGTTTCAT 525
consensus_11518#1      CAGGCATAACTTCTGTATTAGCAGCCTGCTCAATC--CTGCTGTCACTCTTAGCTTCAAG 1035
                       **   * *  *   * **   **        ***   ***  **   * ***  **  * 

consensus_11518#0      TG--TTGGTAGCACTATTGTTGTTAGTGCCATCATGGACGCGTCTTATTCAAGGTTTTGA 1275
consensus_11518#2      TG--TTGATAGCACTATTGTTGTTAGTGCCATCATGGACGCGTCTTATTCAAGGTTTTGA 583
consensus_11518#1      TGGATACATACTTTCACAGCATTGGATATCACTTTTGGTAGCTGTGACATTGAGCGGTTT 1095
                       **  *   **     *  *   *   *  **   * *     * * *      *   *  

consensus_11518#0      AGTGCATCCATTTGTTTGGGTTTTTAACTATATTTTCA--CCGATTCACGTGAACGGCTT 1333
consensus_11518#2      AGTGCATCCATTTGTTTGGGTTTTTAACTATATTTTCA--CCGATTCACGTGAACGGCTT 641
consensus_11518#1      ATTGGAAGCATATACAGCCCAACTCGACAACGCTTTCATACCCCTTGTCTTCTATAGCCT 1155
                       * ** *  *** *          *  ** *   *****  **  **  * *  *  ** *

consensus_11518#0      GCTTTATGCGCATACTGGATATTTGTGATATATGTATCAATTAGAAGGTTCTACAGTATA 1393
consensus_11518#2      GCTTTATGCGCATACTGGATATTTGTGATATATGTATCAATTAGAAGGTTCTACAGTATA 701
consensus_11518#1      CCT--ATGTCTATAGGAGCAACCAATTGTACATCAAACTACCTTGAGGCCCTATTCT-TA 1212
                        **  ***   ***   *  *    *  ** **  * * *     ***  ***   * **

consensus_11518#0      TCAAAACAAA-GCAAAACGGAGAGGATTCTTTTGCGCAAGTATTACCATCTCGTTGCTGT 1452
consensus_11518#2      TCAAAACAAA-GCAAAACGGAGAGGATTCTTTTGCGCAAGTATTACCATCTCGTTGCTGT 760
consensus_11518#1      CCATTACTAATATCTAGTGACTAGTGCAGTACAGTATAGGTATAGCCCTTCGAATTTTTT 1272
                        **  ** **     *  *   **     *   *   * ****  ** *     *  * *

consensus_11518#0      CCTAATTTTCTCTCCTGCAGTAATATTTCAGCCTGATTTCTTGGACTTAGCATTTG-GTG 1511
consensus_11518#2      CCTAATTTTCTCTCCTGCAGTAATATTTCAGCCTGATTTCTTGGACTTGGCATTTG-GTG 819
consensus_11518#1      TTTTAAATCCTCTTAT-TGGTCGCATTCT---CTGTATTCCTGGACCGAGAAATTGTGTC 1328
                         * *  * ****  *   **   ***     ***  *** *****   * * *** ** 

consensus_11518#0      CAGCATTTGCCGTTTTCTTAATATTGGAGATGGTTCGAGTTTGGGAAATATACCCTCTTG 1571
consensus_11518#2      CA---------------------------------------------------------- 821
consensus_11518#1      CATCACTAAAAAGTTGAGTTTAGGTTTAGGAAATAAAGATGAAAATATGAAAGGTTGTTT 1388
                       **                                                          

consensus_11518#0      GGCATATTGTGCATCAGTTCATGAGTGCCTTCACTGATCATCGCGATTCGGAAATTCTAA 1631
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      AGTGAATCCTTCAGTAGAGAGCATCTTTGGTATGATAGACTTCTGAGCCTATCTGGAGGC 1448
                                                                                   

consensus_11518#0      TTGTTAGTCATTTCTCACTCTTGCTGGGATGTGCACTTCCTAAATGGATGTCATCAGGAT 1691
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      ATCAATGTATCATGGAAGGTATGTTGTCTTTCAGAACCAGAACTTCTTCTGCAGGTGGTG 1508
                                                                                   

consensus_11518#0      TCAATGACCGACCTCTTACACCATTTGCTGGAATTCTCAGCTTGGGTATTGGTGATACCA 1751
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      AGACCTATTTCACCCCACAACTCCACAAGCAGTTGGGCAAGAATAGCAAGCTGAGAGTAA 1568
                                                                                   

consensus_11518#0      TGGCATCAATGATAGGTTATAAGTATGGTGTCCTAAGATGGAGCAAGACAGGAAAGAAAA 1811
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      AGCCATATGCTGCAAGGAGCCTGAAATACGGAGACTTGGTTCAGAATTAGTGTATATGGT 1628
                                                                                   

consensus_11518#0      CAATTGAGGGCACAGCAGCAGGCATAACTTCTGTATTAGCAGCCTGCTCAATCCTGCTGT 1871
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      ACCTTATTTCCATGGACATGCGAAGTGTAATTAGTTGTAGTAGCTAATCTCCTGTAAGTT 1688
                                                                                   

consensus_11518#0      CACTCTTAGCTTCAAGTGGATACATACTTTCACAGCATTGGATATCACTTTTGGTAGCTG 1931
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      TTGCGTCATCACTGTACGGAGTAAAAGATCACTACTCAGATTGCAGCCGCGCATTGATGT 1748
                                                                                   

consensus_11518#0      TGACATTGAGCGGTTTATTGGAAGCATATACAGCCCAACTCGACAACGCTTTCATACCCC 1991
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      AAATTTTGTTCTTGACCTGAGAAAAAATGAAATCGAAGTAAGCAAAGCTGCAAATTA--- 1805
                                                                                   

consensus_11518#0      TTGTCTTCTATAGCCTCCTATGTCTATAGGAGCAACCAATTGTACATCAAACTACCTTGA 2051
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      ------------------------------------------------------------
                                                                                   

consensus_11518#0      GGCCCTATTCTTACCATTACTAATATCTAGTGACTAGTGCAGTACAGTATAGGTATAGCC 2111
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      ------------------------------------------------------------
                                                                                   

consensus_11518#0      CTTCGAATTTTTTTTTTAAATCCTCTTATTGGTCGCATTCTCTGTATTCCTGGACCGAGA 2171
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      ------------------------------------------------------------
                                                                                   

consensus_11518#0      AATTGTGTCCATTACTAAAAAGTTGAGTTTAGGTTTAGGAAATAAAGATGAAAATATGAA 2231
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      ------------------------------------------------------------
                                                                                   

consensus_11518#0      AGGTTGTTTAGTGAATCCTTCAGTAGAGAGCATCTTTGGTATGATAGACTTCTGAGCCTA 2291
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      ------------------------------------------------------------
                                                                                   

consensus_11518#0      TCTGGAGGCATCAATGTATCATGGAAGGTATGTTGTCTTTCAGAACCAGAACTTCTTCTG 2351
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      ------------------------------------------------------------
                                                                                   

consensus_11518#0      CAGGTGGTGAGACCTATTTCACCCCACAACTCCACAAGCAGTTGGGCAAGAATAGCAAGC 2411
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      ------------------------------------------------------------
                                                                                   

consensus_11518#0      TGAGAGTAAAGCCATATGCTGCAAGGAGCCTGAAATACGGAGACTTGGTTCAGAATTAAT 2471
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      ------------------------------------------------------------
                                                                                   

consensus_11518#0      GTATATGGTACCTTATTTCCATGGACATGCGAAGTGTAATTAGTTGTAGTAGCTAATCTC 2531
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      ------------------------------------------------------------
                                                                                   

consensus_11518#0      CTGTAAGTTTTGCGTCATCACTGTACGGAGTAAAAGATCACTACTCAGATTGCAACCGCG 2591
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      ------------------------------------------------------------
                                                                                   

consensus_11518#0      CATTGATGTAAATTTTGTTCTTGACCTGAGAAAAAATGAAATCGAAGTAAGCAAAGCTGC 2651
consensus_11518#2      ------------------------------------------------------------
consensus_11518#1      ------------------------------------------------------------
                                                                                   

consensus_11518#0      AAATTAATGTTCTCCTATTATGAGATTGGCAGGTTTGCGATGTTTGAGTTA 2702
consensus_11518#2      ---------------------------------------------------
consensus_11518#1      ---------------------------------------------------