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Oryza sativa
cluster # 11522 cluster # 11522       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11522#0 length = 1289 sequences # 5  
consensus_11522#1 length = 1147 sequences # 3  
consensus_11522#2 length = 555 sequences # 1  

consensusID : consensus_11522#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1289
fasta sequence
                              [CAGNNACGCGTGGTGCCACCGGTCACTTGAATTGTCAAGCTAGCTAGCCTTCTCATCAGCCTGGCTCTCAGTCTCAAAGAAAGCACAAAGGTAGCTAGCTTAGCATCGATTGAAGCTGACCAGAGAGATAGTTAAGAATTTGCCATAGCTTAGTGTTTGGTGCATACACACAACTGCTCTCGTTGTTTTTGCTCTTTTGGGTTCGCTCGGAAGATGAGCCGTGAGGA-GGATGAGAAGCTGCTGTTCCCTTCGTTCGCCTTCCCGGCGGAGTGCTTCCCGGAAGCCGCCACCTCCGGTGGCGAGCAGAAGAAGGCTCGGCAGCGGCGGAGGAGGAAGGTGAAGCCGGAAGCGGCGGCAGCGTTGGCTGGAGAGAGCGGAGGGGATGAGCAGGCGAAGAAGCGGCGGCTGAGCGACGAGCAGGCGCGGTTTCTGGAGATGAGCTTCAAGAAGGAGCGGAAGCTGGAGACGCCGCGCAAGGTGCAGCTCGCCGCGGAGCTGGGCCTCGACGCCAAGCAGGTCGCCGTCTGGTTCCAGAACCGCCGCGCCCGCCACAAGAGCAAGCTCATGGAGGAGGAGTTCGCCAAGCTCCGCTCCGCCCACGACGCCGTCGTCCTCCAGAACTGCCACCTCGAGACCGAGTTGCTGAAGCTGAAGGAGAGGCTGGCGGATGTAGAGGAGGAGAAGGCGAAGCTAGCAGCTGTCGCCGCGGCGACGACCGGCGGCGGTGGTGGCGGCGGCGGCGGCAGCAGCAGCCCGACCTCGTCGTCGTTCTCCACGGTGACGTACCACCCGGCGCTGGCGGGGCAGTTCGGCGTGGAGGCGGCGGCCGAGGAGGCCGACCTCACCTACATGAGTGAGTACGCGTACAACAGCTACATGCTGGAGTTGGCGGCGGCCGGCTACTGCGGCGGGGTCTACGACCAATTCAGCTGAGCGCCGCCACTCGCCGGGGCCGGCGCCGACGGAGGATTAACTAGCTACAGTAGCTGTTAATTAATGGATCGATCAATTGCAGGGTAGTAATTCAGTAGTGGTGGTGTTTATTAGTAGTATCAATGATCGATATATCATCAGTCGTGTTGCCCTAACGAAAAATCTTTAGCGGTGACTTTGCTAAGCCATGTAGATTATTAAATTGGATGTCTTTGTAAGTATATGTGTTTAGAATATCATGCAAGTGGTTGCCATGGACTGATTAATTATGCCATGATGTAATATTTGGTACTGGTACTACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAANANAAAANNA]

[+] EMBL C93468               [CAGNNACGCGTGGTGCCACCGGTCACTTGAATTGTCAAGCTAGCTAGCCTTCTCATCAGCCTGGCTCTCAGTCTCAAAGAAAGCACAAAGGTAGCTAGCTTAGCATCGATTGAAGCTGACCAGAGAGATAGTTAAGAATTTGCCATAGCTTAGTGTTTGGTGCATACACACAACTGCTCTCGTTGTTTTTGCTCTTTTGGGTTCGCTCGGAAGATGAGCCGTGAGGAGGGATNAGAAGCTGCTGTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AK073446             [          ggacaCCACCGGTCACTTGAATTGTCAAGCTAGCTAGCCTTCTCATCAGCCTGGCTCTCAGTCTCAAAGAAAGCACAAAGGTAGCTAGCTTAGCATCGATTGAAGCTGACCAGAGAGATAGTTAAGAATTTGCCATAGCTTAGTGTTTGGTGCATACACACAACTGCTCTCGTTGTTTTTGCTCTTTTGGGTTCGCTCGGAAGATGAGCCGTGAGGA GGATGAGAAGCTGCTGTTCCCTTCGTTCGCCTTCCCGGCGGAGTGCTTCCCGGAAGCCGCCACCTCCGGTGGCGAGCAGAAGAAGGCTCGGCAGCGGCGGAGGAGGAAGGTGAAGCCGGAAGCGGCGGCAGCGTTGGCTGGAGAGAGCGGAGGGGATGAGCAGGCGAAGAAGCGGCGGCTGAGCGACGAGCAGGCGCGGTTTCTGGAGATGAGCTTCAAGAAGGAGCGGAAGCTGGAGACGCCGCGCAAGGTGCAGCTCGCCGCGGAGCTGGGCCTCGACGCCAAGCAGGTCGCCGTCTGGTTCCAGAACCGCCGCGCCCGCCACAAGAGCAAGCTCATGGAGGAGGAGTTCGCCAAGCTCCGCTCCGCCCACGACGCCGTCGTCCTCCAGAACTGCCACCTCGAGACCGAGTTGCTGAAGCTGAAGGAGAGGCTGGCGGATGTAGAGGAGGAGAAGGCGAAGCTAGCAGCTGTCGCCGCGGCGACGACCGGCGGCGGTGGTGGCGGCGGCGGCGGCAGCAGCAGCCCGACCTCGTCGTCGTTCTCCACGGTGACGTACCACCCGGCGCTGGCGGGGCAGTTCGGCGTGGAGGCGGCGGCCGAGGAGGCCGACCTCACCTACATGAGTGAGTACGCGTACAACAGCTACATGCTGGAGTTGGCGGCGGCCGGCTACTGCGGCGGGGTCTACGACCAATTCAGCTGAGCGCCGCCACTCGCCGGGGCCGGCGCCGACGGAGGATTAACTAGCTACAGTAGCTGTTAATTAATGGATCGATCAATTGCAGGGTAGTAATTCAGTAGTGGTGGTGTTTATTAGTAGTATCAATGATCGATATATCATCAGTCGTGTTGCCCTAACGAAAAATCTTTAGCGGTGACTTTGCTAAGCCATGTAGATTATTAAATTGGATGTCTTTGTAAGTATATGTGT                                                                                                                                ]
[+] EMBL CB651021             [                        ACTTGAATTGTCAAGCTAGCTAGCCTTCTCATCAGCCTGGCTCTCAGTCTCAAAGAAAGCACAAAGGTAGCTAGCTTAGCATCGATTGAAGCTGACCAGAGAGATAGTTAAGAATTTGCCATAGCTTAGTGTTTGGTGCATACACACAACTGCTCTCGTTGTTTTTGCTCTTTTGGGTTCGCTCGGAAGATGAGCCGTGAGGA GGATGAGAAGCTGCTGTTCCCTTCGTTCGCCTTCCCGGCGGAGTGCTTCCCGGAAGCCGCCACCTCCGGTGGCGAGCAGAAGAAGGCTCGGCAGCGGCGGAGGAGGAAGGTGAAGCCGGAAGCGGCGGCAGCGTTGGCTGGAGAGAGCGGAGGGGATGAGCAGGCGAAGAAGCGGCGGCTGAGCGACGAGCAGGCGCGGTTTCTGGAGATGAGCTTCAAGAAGGAGCGGAAGCTGGAGACGCCGCGCAAGGTGCAGCTCGCCGCGGAGCTGGGCCTCGACGCCAAGCAGGTCGCCGTCTGGTTCCAGAACCGCCGCGCCCGCCACAAGAGCAAGCTCATGGAGGAGGAGTTCGCCAAGCTCCGCTCCGCCCACGACGCCGTCGTCCTCCAGAACTGCCACCTCGAGACCGAGTTGCTGAAGCTGAAGGAGAGGCTGGCGGATGTAGAGGAGGAGAAGGCGAAGCTAGCAGCTGTCGCCGCGGCGACGACCGGCGGCGGTGGTGGCGGCGGCGGCGGCAGCANCAGCCCGACCTCGTCGTCGTTCTCCACGGTGACGTACCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB651022             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCGCCGTTTGGTTCCAGAACCGCCGCGCCCGCCACAAGAGCAAGCTCATGGAGGAGGAGTTTGCCAAGGTCCGCTCCGCCCACGACGCCGTTGTCCTCCAGAACTGCCACCTTGAGACCGAGTTGCTGAAGCTGAAGGAGAGGCTGGCGGATGTAGAGGAGGAGAAGGCGAAGCTAGCAGCTGTTGCCGCGGCGACGACCGGCGGCGGTGGTGGCGGCGGCGGCGGCAACAGCAGCCCGACCTTGTTGTTGTTTTCCACGGTGACGTACCCCCCGGCGCTGGCGGGGCAGTTTGGCGTGGAGGCGGCGGCCGAGGAGGCCGACCTCACCTACATGAGTGAGTACGGGTACAACAGCTACATGCTGGAGTTGGCGGCGGCCGGCTTCTGCGGCGGGGTTTTCGACCAATTCAGGTGAGCGCCGCCACTTGCCGGGGCCGGCGCCGACGGAGGATTAACTAGCTACAGTAGCTGTTAATTAATGGATCGATCAATTGCAGGGTAGTAATTCAGTAGTGGTGGTGTTTATTAGTAGTATCAATGATCGATATATCATCAGTTGTGTTGCCCTAACGAAAAATTTTTAGCGGTGACTTTGCTAAGCCATGTAGATTATTAAATTGGATGTTTTTGTAAGTATATGTGTTTAGAATATCATGCAAGTGGTTGCCATGGACTGATTAATTATGCCATGATGTAA                                                                          ]
[+] EMBL AU091419             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAAAATCTTTAGCGGTGACTTTGCTAAGCCATGTAGATTATTAAATTGGATGTCTTTGTAAGTATATGTGTTTAGAATATCATGCAAGTGGTTGCCATGGACTGATTAATTATGCCATGATGTAATATTTGGTACTGGTACTACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAANANAAAANNA]


>consensus_11522#0 CAGNNACGCGTGGTGCCACCGGTCACTTGAATTGTCAAGCTAGCTAGCCTTCTCATCAGC CTGGCTCTCAGTCTCAAAGAAAGCACAAAGGTAGCTAGCTTAGCATCGATTGAAGCTGAC CAGAGAGATAGTTAAGAATTTGCCATAGCTTAGTGTTTGGTGCATACACACAACTGCTCT CGTTGTTTTTGCTCTTTTGGGTTCGCTCGGAAGATGAGCCGTGAGGAGGATGAGAAGCTG CTGTTCCCTTCGTTCGCCTTCCCGGCGGAGTGCTTCCCGGAAGCCGCCACCTCCGGTGGC GAGCAGAAGAAGGCTCGGCAGCGGCGGAGGAGGAAGGTGAAGCCGGAAGCGGCGGCAGCG TTGGCTGGAGAGAGCGGAGGGGATGAGCAGGCGAAGAAGCGGCGGCTGAGCGACGAGCAG GCGCGGTTTCTGGAGATGAGCTTCAAGAAGGAGCGGAAGCTGGAGACGCCGCGCAAGGTG CAGCTCGCCGCGGAGCTGGGCCTCGACGCCAAGCAGGTCGCCGTCTGGTTCCAGAACCGC CGCGCCCGCCACAAGAGCAAGCTCATGGAGGAGGAGTTCGCCAAGCTCCGCTCCGCCCAC GACGCCGTCGTCCTCCAGAACTGCCACCTCGAGACCGAGTTGCTGAAGCTGAAGGAGAGG CTGGCGGATGTAGAGGAGGAGAAGGCGAAGCTAGCAGCTGTCGCCGCGGCGACGACCGGC GGCGGTGGTGGCGGCGGCGGCGGCAGCAGCAGCCCGACCTCGTCGTCGTTCTCCACGGTG ACGTACCACCCGGCGCTGGCGGGGCAGTTCGGCGTGGAGGCGGCGGCCGAGGAGGCCGAC CTCACCTACATGAGTGAGTACGCGTACAACAGCTACATGCTGGAGTTGGCGGCGGCCGGC TACTGCGGCGGGGTCTACGACCAATTCAGCTGAGCGCCGCCACTCGCCGGGGCCGGCGCC GACGGAGGATTAACTAGCTACAGTAGCTGTTAATTAATGGATCGATCAATTGCAGGGTAG TAATTCAGTAGTGGTGGTGTTTATTAGTAGTATCAATGATCGATATATCATCAGTCGTGT TGCCCTAACGAAAAATCTTTAGCGGTGACTTTGCTAAGCCATGTAGATTATTAAATTGGA TGTCTTTGTAAGTATATGTGTTTAGAATATCATGCAAGTGGTTGCCATGGACTGATTAAT TATGCCATGATGTAATATTTGGTACTGGTACTACTCAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAANAAAAAAAANANAAAANNA



consensusID : consensus_11522#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1147
fasta sequence
                              [GTGGTGGTGCGTGGTCCTCTTCTCCATCCAGAGACAATCCAGTTCAGTTCAGTTTCCTCTCTCCCTCCTGTCCTCACCTCACGCTTGACA----AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGGCTGAACTGAGCTGAGCTGATCGAGCTAGTGTGCGAGACGGCATGGACCGATACGGCGAGAAGCAGCAGCAGCAGCAGATGTTTGCCTCCTACGTGGA-CGCCTCCCTCCTAGCAGCCAGCGGTGAGGTGCAGGGCGAGAGGCCGAGAGCGCGGAGGAGGAGGAGGCGTGGGGCGAGGTGCGTTGGCGGCGGCGGCGGTGGTGGCGAGGTGGACGGAGGGGACCCGAAGAAGCGGCGGCTGAGCGACGAGCAGGTGGAGATGCTGGAGCTGAGCTTCCGGGAGGAGCGGAAGCTGGAGACCGGGCGGAAGGTGCACCTTGCCTCCGAGCTCGGGCTCGACCCCAAGCAGGTGGCCGTCTGGTTCCAGAACCGCCGCGCCCGCCACAAGAGCAAGCTGCTCGAGGAGGAGTTCTCCAAGCTCAAGCACGCCCACGACGCCGCCATCCTCCACAAATGCCACCTCGAGAACGAGGTGCTGAGGCTGAAGGAGAGGCTGGTGGTCGCCGAGGAGGAAGTGAGGCGGCTCAGATCAGCGGCGGGGAGCCACACGGCCTCCGGAGAAGGCGGAGACATCATGGGCTTAGGCGGCAGCGGCGCCTGCGTCGCCGGGAGCCCGAGCTCGTCGTTCTCGACGGGTACCTGCCAGCCGCCGAGCTTCGGCGGCGGAGATCACCTCGGAGACGATGACCTGGTGTATGTCCCGGAGTACGGCGGCTACGCTGATAACAGTGTGGTTGAGTGGTTCAGCCTGTATGGATTGATCTAACGAAGATCAAGTTGATGATGGCATGTGCGGGGAATTTAGTTAGTCATAGTGTTAATTAAGCTGTATGGTGATCGATCGAACTGATATGGTCAGCTCTAAGTGTGTGTGTTTAATTATGTACATAAAGTGATTAATGGCAAAACCTGGCCAGCTAGCTAGTAATGTATTAATATTAGTAGTTCGCTTAAAAAAGATCAGATGTGTGTTCCAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK121889             [ TGGTGGTGCGTGGTCCTCTTCTCCATCCAGAGACAATCCAGTTCAGTTCAGTTTCCTCTCTCCCTCCTGTCCTCACCTCACGCTTGACA    AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGGCTGAACTGAGCTGAGCTGATCGAGCTAGTGTGCGAGACGGCATGGACCGATACGGCGAGAAGCAGCAGCAGCAGCAGATGTTTGCCTCCTACGTGGA CGCCTCCCTCCTAGCAGCCAGCGGTGAGGTGCAGGGCGAGAGGCCGAGAGCGCGGAGGAGGAGGAGGCGTGGGGCGAGGTGCGTTGGCGGCGGCGGCGGTGGTGGCGAGGTGGACGGAGGGGACCCGAAGAAGCGGCGGCTGAGCGACGAGCAGGTGGAGATGCTGGAGCTGAGCTTCCGGGAGGAGCGGAAGCTGGAGACCGGGCGGAAGGTGCACCTTGCCTCCGAGCTCGGGCTCGACCCCAAGCAGGTGGCCGTCTGGTTCCAGAACCGCCGCGCCCGCCACAAGAGCAAGCTGCTCGAGGAGGAGTTCTCCAAGCTCAAGCACGCCCACGACGCCGCCATCCTCCACAAATGCCACCTCGAGAACGAGGTGCTGAGGCTGAAGGAGAGGCTGGTGGTCGCCGAGGAGGAAGTGAGGCGGCTCAGATCAGCGGCGGGGAGCCACACGGCCTCCGGAGAAGGCGGAGACATCATGGGCTTAGGCGGCAGCGGCGCCTGCGTCGCCGGGAGCCCGAGCTCGTCGTTCTCGACGGGTACCTGCCAGCCGCCGAGCTTCGGCGGCGGAGATCACCTCGGAGACGATGACCTGGTGTATGTCCCGGAGTACGGCGGCTACGCTGATAACAGTGTGGTTGAGTGGTTCAGCCTGTATGGATTGATCTAACGAAGATCAAGTTGATGATGGCATGTGCGGGGAATTTAGTTAGTCATAGTGTTAATTAAGCTGTATGGTGATCGATCGAACTGATATGGTCAGCTCTAAGTGTGTGTGTTTAATTATGTACATAAAGTGATTAATGGCAAAACCTGGCCAGCTAGCTAGTAATGTATTAATATTAGTAGTTCGCTTAAAAAAGATCAGA                                   ]
[+] EMBL C27434               [gttngnGTGCGTGGTCCTCTTCTCCATCCAGAGACAATCCAGTTCAGTTCAGTTTCCTCTCTCCCTCCTGTCCTCACCTCACGCTTGACAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGTCTGAACTGAGCTGAGCTGNTCGAGCTAGTGTGCGAGACGNCATGNACCGATACGGCGAGAAGCAGCAGCAGCAGCAGATGTTTGCCTCCTACGTGGACCGTCTCCCTCCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU166884             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GATCNCCTCGGAGACGATGACCTGGTGTATGTCCCGGAGTACGGCGGCTACGCTGATAACAGTGTGGTTGAGTGGTTCAGCCTGTATGGATTGATCTAACGAAGATCAAGTTNATGATGGCATGTGCGGGGAATTTAGTTAGTCATAGTGTTAATTAAGCTGTATGGTGATCGATCGAACTGATATGGTCAGCTCTAAGTGTGTGTGTTTAATTATGTACATAAAGTGATTAATGGCAAAACCTGGCCAGCTAGCTAGTAATGTATTAATATTAGTAGTTCGCTTAAAAAANATCAGATGTGTGTTCCAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_11522#1 GTGGTGGTGCGTGGTCCTCTTCTCCATCCAGAGACAATCCAGTTCAGTTCAGTTTCCTCT CTCCCTCCTGTCCTCACCTCACGCTTGACAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG AGAGAGAGAGAGAGAGAGAGAGAGAAAGGCTGAACTGAGCTGAGCTGATCGAGCTAGTGT GCGAGACGGCATGGACCGATACGGCGAGAAGCAGCAGCAGCAGCAGATGTTTGCCTCCTA CGTGGACGCCTCCCTCCTAGCAGCCAGCGGTGAGGTGCAGGGCGAGAGGCCGAGAGCGCG GAGGAGGAGGAGGCGTGGGGCGAGGTGCGTTGGCGGCGGCGGCGGTGGTGGCGAGGTGGA CGGAGGGGACCCGAAGAAGCGGCGGCTGAGCGACGAGCAGGTGGAGATGCTGGAGCTGAG CTTCCGGGAGGAGCGGAAGCTGGAGACCGGGCGGAAGGTGCACCTTGCCTCCGAGCTCGG GCTCGACCCCAAGCAGGTGGCCGTCTGGTTCCAGAACCGCCGCGCCCGCCACAAGAGCAA GCTGCTCGAGGAGGAGTTCTCCAAGCTCAAGCACGCCCACGACGCCGCCATCCTCCACAA ATGCCACCTCGAGAACGAGGTGCTGAGGCTGAAGGAGAGGCTGGTGGTCGCCGAGGAGGA AGTGAGGCGGCTCAGATCAGCGGCGGGGAGCCACACGGCCTCCGGAGAAGGCGGAGACAT CATGGGCTTAGGCGGCAGCGGCGCCTGCGTCGCCGGGAGCCCGAGCTCGTCGTTCTCGAC GGGTACCTGCCAGCCGCCGAGCTTCGGCGGCGGAGATCACCTCGGAGACGATGACCTGGT GTATGTCCCGGAGTACGGCGGCTACGCTGATAACAGTGTGGTTGAGTGGTTCAGCCTGTA TGGATTGATCTAACGAAGATCAAGTTGATGATGGCATGTGCGGGGAATTTAGTTAGTCAT AGTGTTAATTAAGCTGTATGGTGATCGATCGAACTGATATGGTCAGCTCTAAGTGTGTGT GTTTAATTATGTACATAAAGTGATTAATGGCAAAACCTGGCCAGCTAGCTAGTAATGTAT TAATATTAGTAGTTCGCTTAAAAAAGATCAGATGTGTGTTCCAAAAAAAAAAAAAAAAAA AAAAAAA



consensusID : consensus_11522#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 555
fasta sequence
                              [TCTTTTGTTTGGTTGGTTGTTGTGTTGCAGGTGGCGAGCAGAAGAAGGCTCGGCAGCGGCGGAGGAGGAAGGTGAAGCCGGAAGCGGCGGCAGCGTTGGCTGGAGAGAGCGGAGGGGATGAGCAGGCGAAGAAGCGGCGGCTGAGCGACGAGCAGGCGCGGTTTCTGGAGATGAGCTTCAAGAAGGAGCGGAAGCTGGAGACGCCGCGCAAGGTGCAGCTCGCCGCGGAGCTGGGCCTCGACGCCAAGCAGGTCGCCGTCTGGTTCCAGAACCGCCGCGCCCGCCACAAGAGCAAGCTCATGGAGGAGGAGTTCGCCAAGCTCCGCTCCGCCCACGACGCCGTCGTCCTCCAGAACTGCCACCTCGAGACCGAGTTGCTGAAGCTGAAGGAGAGGCTGGCGGATGTAGAGGAGGAGAAAGCGAAGCTAGCAGCTGTCGCCGCGGCGACGACCGGCGGCGGTGGTGGCGGCGGCGGCGGCAGCAGCAGCCCGACCTCGTCGTCGTTCTCCACGGTGACGTACCACCCGGTGCTGGCGGGGCAGTTCGGCGTGGAGG]

[+] EMBL BF430887             [TCTTTTGTTTGGTTGGTTGTTGTGTTGCAGGTGGCGAGCAGAAGAAGGCTCGGCAGCGGCGGAGGAGGAAGGTGAAGCCGGAAGCGGCGGCAGCGTTGGCTGGAGAGAGCGGAGGGGATGAGCAGGCGAAGAAGCGGCGGCTGAGCGACGAGCAGGCGCGGTTTCTGGAGATGAGCTTCAAGAAGGAGCGGAAGCTGGAGACGCCGCGCAAGGTGCAGCTCGCCGCGGAGCTGGGCCTCGACGCCAAGCAGGTCGCCGTCTGGTTCCAGAACCGCCGCGCCCGCCACAAGAGCAAGCTCATGGAGGAGGAGTTCGCCAAGCTCCGCTCCGCCCACGACGCCGTCGTCCTCCAGAACTGCCACCTCGAGACCGAGTTGCTGAAGCTGAAGGAGAGGCTGGCGGATGTAGAGGAGGAGAAAGCGAAGCTAGCAGCTGTCGCCGCGGCGACGACCGGCGGCGGTGGTGGCGGCGGCGGCGGCAGCAGCAGCCCGACCTCGTCGTCGTTCTCCACGGTGACGTACCACCCGGTGCTGGCGGGGCAGTTCGGCGTGGAGG]


>consensus_11522#2 TCTTTTGTTTGGTTGGTTGTTGTGTTGCAGGTGGCGAGCAGAAGAAGGCTCGGCAGCGGC GGAGGAGGAAGGTGAAGCCGGAAGCGGCGGCAGCGTTGGCTGGAGAGAGCGGAGGGGATG AGCAGGCGAAGAAGCGGCGGCTGAGCGACGAGCAGGCGCGGTTTCTGGAGATGAGCTTCA AGAAGGAGCGGAAGCTGGAGACGCCGCGCAAGGTGCAGCTCGCCGCGGAGCTGGGCCTCG ACGCCAAGCAGGTCGCCGTCTGGTTCCAGAACCGCCGCGCCCGCCACAAGAGCAAGCTCA TGGAGGAGGAGTTCGCCAAGCTCCGCTCCGCCCACGACGCCGTCGTCCTCCAGAACTGCC ACCTCGAGACCGAGTTGCTGAAGCTGAAGGAGAGGCTGGCGGATGTAGAGGAGGAGAAAG CGAAGCTAGCAGCTGTCGCCGCGGCGACGACCGGCGGCGGTGGTGGCGGCGGCGGCGGCA GCAGCAGCCCGACCTCGTCGTCGTTCTCCACGGTGACGTACCACCCGGTGCTGGCGGGGC AGTTCGGCGTGGAGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11522#0      -CAGNNACGCGTGGTGCCACCGGTCACTTGAATTGTCAAGCTAGCT-AGCCTTCTCATCA 58
consensus_11522#2      ------------------------------------------------------------
consensus_11522#1      GTGGTGGTGCGTGGTCCTCTTCTCCATCCAGA--GACAATCCAGTTCAGTTCAGTTTCCT 58
                                                                                   

consensus_11522#0      GCCTGGCTCTCAGTCTCAAAGAAAGCACAAAGGTAGCTAGCTTAGCATCGATTGAAGCTG 118
consensus_11522#2      ------------------------------------------------------------
consensus_11522#1      CTCTCCCTCCTGTCCTCACCTCACGCTTGACAAGAGAGAGAGAGAGAGAGAGAGAGAGAG 118
                                                                                   

consensus_11522#0      ACCAGAGAGATAGTTAAGAATTTGCCATAGCTTAGTGTTTGGTGCATACACACAACTGCT 178
consensus_11522#2      ------------------------------------------------------------
consensus_11522#1      AG-AGAGAGAGAG---AGAGAGAGAGAGAG---AAAGGCTGA-------ACTGAGCTGAG 164
                                                                                   

consensus_11522#0      CTCGTTGTTTTTGCTCTTTTGGGTTCGCTCGGAAGATGAGCCGTGAGGAGGATGAGAAGC 238
consensus_11522#2      ------------------------------------------------------------
consensus_11522#1      CTGATCGAGCTAGT--GTGCGAGACGGC-------ATGGACCGATACGGCGAGAAGCAGC 215
                                                                                   

consensus_11522#0      TGCTGTTCCCTTCGTTCGCCTTCCCGGCGGAGTGCTTCCCGGAAGCCGCCACCTCCGGTG 298
consensus_11522#2      -------------------TCTTTTGTTTGGTTGGTTGTTG--------TGTTGCAGGTG 33
consensus_11522#1      AGCAGCAGCAGATGTTTGCCTCCTACGTGGACGCCTCCCTCCTAGCAGCCAGCGGTGAGG 275
                                                    *     *                    *  *

consensus_11522#0      GCGAGCAGAAGAAGGCTCGGCAGCGGCGGAGGAGGAAG-GTGAAGCCGGAAGCGGCGGCA 357
consensus_11522#2      GCGAGCAGAAGAAGGCTCGGCAGCGGCGGAGGAGGAAG-GTGAAGCCGGAAGCGGCGGCA 92
consensus_11522#1      TGCAGGGCGAGAGGCCGAGAGCGCGGAGGAGGAGGAGGCGTGGGGCGAGGTGCGTTGGCG 335
                          **    *** * *  *   **** ********* * ***  **  *  ***  *** 

consensus_11522#0      GCGTTGGCTGGAGAGAGCGGAGGGGATGAGCAGG---CGAAGAAGCGGCGGCTGAGCGAC 414
consensus_11522#2      GCGTTGGCTGGAGAGAGCGGAGGGGATGAGCAGG---CGAAGAAGCGGCGGCTGAGCGAC 149
consensus_11522#1      GCGGCGGC-GGTGGTGGCGAGGTGGACGGAGGGGACCCGAAGAAGCGGCGGCTGAGCGAC 394
                       ***  *** ** *   ***  * *** *    **   ***********************

consensus_11522#0      GAGCAGGCGCGGTTTCTGGAGATGAGCTTCAAGAAGGAGCGGAAGCTGGAGACGCCGCGC 474
consensus_11522#2      GAGCAGGCGCGGTTTCTGGAGATGAGCTTCAAGAAGGAGCGGAAGCTGGAGACGCCGCGC 209
consensus_11522#1      GAGCAGGTGGAGATGCTGGAGCTGAGCTTCCGGGAGGAGCGGAAGCTGGAGACCGGGCGG 454
                       ******* *  * * ****** ********  * *******************   *** 

consensus_11522#0      AAGGTGCAGCTCGCCGCGGAGCTGGGCCTCGACGCCAAGCAGGTCGCCGTCTGGTTCCAG 534
consensus_11522#2      AAGGTGCAGCTCGCCGCGGAGCTGGGCCTCGACGCCAAGCAGGTCGCCGTCTGGTTCCAG 269
consensus_11522#1      AAGGTGCACCTTGCCTCCGAGCTCGGGCTCGACCCCAAGCAGGTGGCCGTCTGGTTCCAG 514
                       ******** ** *** * ***** ** ****** ********** ***************

consensus_11522#0      AACCGCCGCGCCCGCCACAAGAGCAAGCTCATGGAGGAGGAGTTCGCCAAGCTCCGCTCC 594
consensus_11522#2      AACCGCCGCGCCCGCCACAAGAGCAAGCTCATGGAGGAGGAGTTCGCCAAGCTCCGCTCC 329
consensus_11522#1      AACCGCCGCGCCCGCCACAAGAGCAAGCTGCTCGAGGAGGAGTTCTCCAAGCTCAAGCAC 574
                       *****************************  * ************ ********     *

consensus_11522#0      GCCCACGACGCCGTCGTCCTCCAGAACTGCCACCTCGAGACCGAGTTGCTGAAGCTGAAG 654
consensus_11522#2      GCCCACGACGCCGTCGTCCTCCAGAACTGCCACCTCGAGACCGAGTTGCTGAAGCTGAAG 389
consensus_11522#1      GCCCACGACGCCGCCATCCTCCACAAATGCCACCTCGAGAACGAGGTGCTGAGGCTGAAG 634
                       ************* * ******* ** ************* **** ****** *******

consensus_11522#0      GAGAGGCTGGCGGATGTAGAGGAGGAGAAGGCGAAGCTAGCAGCTGTCGCCGCGGCGACG 714
consensus_11522#2      GAGAGGCTGGCGGATGTAGAGGAGGAGAAAGCGAAGCTAGCAGCTGTCGCCGCGGCGACG 449
consensus_11522#1      GAGAGGCTGGTGGTCGCCGAGGAGGAAGTGAGGCGGCT--CAGAT----CAGCGGCGGGG 688
                       ********** **  *  ********      *  ***  *** *    * ******  *

consensus_11522#0      ACCGGCGGCGGTGGTGGCGGCGGCGGCGGCAGCAGCAGCCCGACCTCGTCGTCGTTCTCC 774
consensus_11522#2      ACCGGCGGCGGTGGTGGCGGCGGCGGCGGCAGCAGCAGCCCGACCTCGTCGTCGTTCTCC 509
consensus_11522#1      AGCCACACGGCCTCCGGAGAAGGCGGAGACATCATGGGCTTAGGC--GGCAGCGGCGCCT 746
                       * *  *   *     ** *  ***** * ** **   **     *  * *  **    * 

consensus_11522#0      ACGGTGACGTACCACCCGGCGCTGGCGGGGCAGTTCGGCGTGGAGGCGGCGGCCGAGGAG 834
consensus_11522#2      ACGGTGACGTACCACCCGGTGCTGGCGGGGCAGTTCGGCGTGGAGG-------------- 555
consensus_11522#1      GCGTCGCCGGG--AGCCCGAGCTCGTCGTTC---TCGACGGGTACCTGCCAGCCGCCGAG 801
                        **  * **    * ** * *** *  *  *   *** ** * *                

consensus_11522#0      GCCGACCTCACCTACATGAGTGAGTACGCGTACAACAGCTACATGCTGGAGTTGGCGGCG 894
consensus_11522#2      ------------------------------------------------------------
consensus_11522#1      -----CTTCGGCGGCGGAGATCACCTCGGAGACGATG---ACCTGGTGTATGTCCCGGAG 853
                                                                                   

consensus_11522#0      GCCGGCTACTGCGGCGGGGTCTACGACCAATTCAGCTGAGCGCCGCCACTCGCCGGGGCC 954
consensus_11522#2      ------------------------------------------------------------
consensus_11522#1      TACGGCGGCTACG-------CTGATAACAGTGTGGTTGAGTGGTTCAGCCTGTATGGATT 906
                                                                                   

consensus_11522#0      GGCGCCGACGGAGGATTAACTAGCTACAGTAGCTGTTAATTAATGGATCGATCAATTGCA 1014
consensus_11522#2      ------------------------------------------------------------
consensus_11522#1      GAT-CTAACGAAG-ATCAA---------------GTTGAT-GATGG------CATGTGCG 942
                                                                                   

consensus_11522#0      GGGTAGTAATTCAGTAGTGGTGGTGTTTATTAGTAGTATCAATGATCGATATATCATCAG 1074
consensus_11522#2      ------------------------------------------------------------
consensus_11522#1      GGGAATTTAGTTAGTCATAGTGTTAATTA--AGCTGTAT-GGTGATCGATCGAAC-TGAT 998
                                                                                   

consensus_11522#0      TCGTGTTGCCCTAACGAAAAATCTTTAGCGGTGACTTTGCTAAGCCATGTAGATTATTAA 1134
consensus_11522#2      ------------------------------------------------------------
consensus_11522#1      ATGGTCAGCTCTAAGTGTGTGTGTTTAATTATG--TACATAAAGTGAT--TAATGGCAAA 1054
                                                                                   

consensus_11522#0      ATTGGATGTCTTTGTAAGTATATGTGTTTAGAATATCATGCAAGTGGTTGCCATGGACTG 1194
consensus_11522#2      ------------------------------------------------------------
consensus_11522#1      ACCTGGCCAGCTAGCTAGTA-ATGTATT---AATATT-----AGTAGTT---------CG 1096
                                                                                   

consensus_11522#0      ATTAATTATGCCATGATGTAATATTTGGTACTGGTACTACTCAAAAAAAAAAAAAAAAAA 1254
consensus_11522#2      ------------------------------------------------------------
consensus_11522#1      CTTAAAAAAGATCAGATGTG-----------------TGTTCCAAAAAAAAAAAAAAAAA 1139
                                                                                   

consensus_11522#0      AAAAAAAAAAAAAAAANAAAAAAAANANAAAANNA 1289
consensus_11522#2      -----------------------------------
consensus_11522#1      AAAAAAAA--------------------------- 1147
                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)