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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11527#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1975 fasta sequence
[TCCCTTTACATATCTGCATCAACTTTCTCGTTCCAAACAGGCGATGGTGAGCAGAGCGGACACGCCGGCCGCCGCCCATCTTGTCCCAATTCGGCTCCTATAAATTTCCCTCCAAATTCGCACTGATTCCTCACGCTACCCGCCCATCGATCTCGCGCCATCTCACAATGCGGATGAGGGTCTCACTGCGCCGTCGACGTTGGCCGGGCCGACGCGGCCGGTGACGGTGCCGCCGCGGGACAGGGGCCACGCGGTGGACCTGCCGGACACGGACCCGCGGGTGCAGCGGCGGGTCAAGGGGTGGGCGCCGGAGCAGATCGCCGTCGCGCTCTCCGCCGCGCCCTCCTCCGCCTGGGTCTCCTGGGTCACGGGGGACTTCCAGATGGGCGCCGCCGTCGAGCCGCTCGACCCCACGGCGGTCGCCAGCGTCGTCCGCTACGGCCTCGCCGCCGACTCGCTCGTCCGCCGCGCCACCGGCGACGCCCTCGTGTACAGCCAGCTCTACCCCTTCGACGGCCTCCTCAACTACACCTCCGCCATCATCCACCATGTCCGCCTCCAAGGGCTTGAGCCAGGGACAGAGTACTTCTACCAGTGCGGCGACCCGGCGATCCCGGCGGCGATGAGCGACATCCACGCGTTCCGCACGATGCCGGCCGTCGGGCCGAGGAGCTACCCGGGGAAGATCGCCATCGTCGGGGACCTTGGACTGACGTACAACACCACCTCCACCGTCGAGCACATGGTGAGCAACCAGCCCGACCTGGTCCTCCTCCTCGGCGACGTCAGCTACGCCAACCTGTACCTCACCAATGGCACCGGCACAGACTGCTACTCCTGCTCCTTCGCCAACTCCACGCCCATCCATGAGACGTATCAGCCGCGCTGGGATTACTGGGGAAGGTACATGGAGCCAGTGACGTCGAGGATTCCGATGATGGTGGTGGAAGGGAACCATGAGATTGAGGAGCAGATCGATAACAAGACGTTCGCTTCTTACAGCTCCAGATTCTCGTTCCCATCGACGGAGAGTGGATCATTCTCTCCATTCTACTACTCTTTCGATGCTGGAGGCATCCATTTCATCATGCTCGCGGCTTATGCTGATTACAGTAAATCAGGGAAGCAGTACAAATGGCTGGAGAAAGACTTGGCAAAGGTGGACAGGTCGGTGACCCCCTGGGTGATAGCCGGCTGGCATGCGCCATGGTACAGCACCTTCAAAGCTCACTACAGGGAAGCAGAGTGCATGCGAGTGGCCATGGAGGAGCTCCTCTACTCCTACGCCGTCGACGTCGTCTTCACCGGCCATGTGCATGCTTACGAGCGTTCGAACCGGGTGTTCAACTACACGCTGGACCCGTGCGGCCCCGTGCACATCTCCGTCGGCGACGGCGGCAACCGCGAGAAGATGGCCACCAGCTACGCCGACGAGCCGGGGCGCTGCCCTGACCCGCTGTCCACGCCGGACCCCTTCATGGGCGGCGGCTTCTGCGGCTTC-AACTTCACCTCCGGCCCCGCCGCCGGCAGCTTTTGCTGGGACCGGCAGCCCGACTACAGCGCCTACCGGGAGAGCAGCTTCGGCCATGGCATTCTTGAGGTGAAGAACGAGACGCATGCGTTGTGGAGATGGCACAGGAACCAGGATCTGTACGGTAGTGTCGGGGATGAGATTTACATTGTTCGGGAGCCTGACAAGTGCCTGATCAAATCCAGTAGAAATAGAATAGCTTACTATTGATTAATTTCTATCAGAAGAAGAGCCAAATTACGCGGGCACATTTTATAGTGCTTTGCTAGCTAGTTGTACTCAGATTTGTCAGGTAAATTCCATGCAGCGACCGGCATCTCTGCTGTTGTATACGTGTTCTTGTAAGACATCTGAAGAATGAATGAAGCTTAAATTGTACTTTGTAATTTAGTTGTAGAAATTTTGGAATTATTACAAGATGGAAGCCACCTTGCAAAAAAAAAA]
[+] EMBL AK072278 [TCCCTTTACATATCTGCATCAACTTTCTCGTTCCAAACAGGCGATGGTGAGCAGAGCGGACACGCCGGCCGCCGCCCATCTTGTCCCAATTCGGCTCCTATAAATTTCCCTCCAAATTCGCACTGATTCCTCACGCTACCCGCCCATCGATCTCGCGCCATCTCACAATGCGGATGAGGGTCTCACTGCGCCGTCGACGTTGGCCGGGCCGACGCGGCCGGTGACGGTGCCGCCGCGGGACAGGGGCCACGCGGTGGACCTGCCGGACACGGACCCGCGGGTGCAGCGGCGGGTCAAGGGGTGGGCGCCGGAGCAGATCGCCGTCGCGCTCTCCGCCGCGCCCTCCTCCGCCTGGGTCTCCTGGGTCACGGGGGACTTCCAGATGGGCGCCGCCGTCGAGCCGCTCGACCCCACGGCGGTCGCCAGCGTCGTCCGCTACGGCCTCGCCGCCGACTCGCTCGTCCGCCGCGCCACCGGCGACGCCCTCGTGTACAGCCAGCTCTACCCCTTCGACGGCCTCCTCAACTACACCTCCGCCATCATCCACCATGTCCGCCTCCAAGGGCTTGAGCCAGGGACAGAGTACTTCTACCAGTGCGGCGACCCGGCGATCCCGGCGGCGATGAGCGACATCCACGCGTTCCGCACGATGCCGGCCGTCGGGCCGAGGAGCTACCCGGGGAAGATCGCCATCGTCGGGGACCTTGGACTGACGTACAACACCACCTCCACCGTCGAGCACATGGTGAGCAACCAGCCCGACCTGGTCCTCCTCCTCGGCGACGTCAGCTACGCCAACCTGTACCTCACCAATGGCACCGGCACAGACTGCTACTCCTGCTCCTTCGCCAACTCCACGCCCATCCATGAGACGTATCAGCCGCGCTGGGATTACTGGGGAAGGTACATGGAGCCAGTGACGTCGAGGATTCCGATGATGGTGGTGGAAGGGAACCATGAGATTGAGGAGCAGATCGATAACAAGACGTTCGCTTCTTACAGCTCCAGATTCTCGTTCCCATCGACGGAGAGTGGATCATTCTCTCCATTCTACTACTCTTTCGATGCTGGAGGCATCCATTTCATCATGCTCGCGGCTTATGCTGATTACAGTAAATCAGGGAAGCAGTACAAATGGCTGGAGAAAGACTTGGCAAAGGTGGACAGGTCGGTGACCCCCTGGGTGATAGCCGGCTGGCATGCGCCATGGTACAGCACCTTCAAAGCTCACTACAGGGAAGCAGAGTGCATGCGAGTGGCCATGGAGGAGCTCCTCTACTCCTACGCCGTCGACGTCGTCTTCACCGGCCATGTGCATGCTTACGAGCGTTCGAACCGGGTGTTCAACTACACGCTGGACCCGTGCGGCCCCGTGCACATCTCCGTCGGCGACGGCGGCAACCGCGAGAAGATGGCCACCAGCTACGCCGACGAGCCGGGGCGCTGCCCTGACCCGCTGTCCACGCCGGACCCCTTCATGGGCGGCGGCTTCTGCGGCTTC AACTTCACCTCCGGCCCCGCCGCCGGCAGCTTCTGCTGGGACCGGCAGCCCGACTACAGCGCCTACCGGGAGAGCAGCTTCGGCCATGGCATTCTTGAGGTGAAGAACGAGACGCATGCGTTGTGGAGATGGCACAGGAACCAGGATCTGTACGGTAGTGTCGGGGATGAGATTTACATTGTTCGGGAGCCTGACAAGTGCCTGATCAAATCCAGTAGAAATAGAATAGCTTACTATTGATTAATTTCTATCAGAAGAAGAGCCAAATTACGCGGGCACATTTTATAGTGCTTTGCTAGCTAGTTGTACTCAGATTTGTCAGGTAAATTCCATGCAGCGACCGGCATCTCTGCTGTTGTATACGTGTTCTTGTAAGACATCTGAAGAATGAATGAAGCTTAAAT ]
[+] EMBL CB655101 [ AGATGCGTGCCGCCGTCGAGCCGCTCGACCCCACGGCGGTCGCCAGCGTCGTCCGCTACGGCCTCGCCGCCGACTCGCTCGTCCGCCGCGCCACCGGCGACGCCCTCGTGTACAGCCAGCTCTACCCCTTCGACGGCCTCCTCAACTACACCTCCGCCATCATCCACCATGTCCGCCTCCAAGGGCTTGAGCCAGGGACAGAGTACTTCTACCAGTGCGGCGACCCGGCGATCCCGGCGGCGATGAGCGACATCCACGCGTTCCGCACGATGCCGGCCGTCGGGCCGAGGAGCTACCCGGGGAAGATCGCCATCGTCGGGGACCTTGGACTGACGTACAACACCACCTCCACCGTCGAGCACATGGTGAGCAACCAGCCCGACCTGGTCCTCCTCCTCGGCGACGTCAGCTACGCCAACCTGTACCTCACCAATGGCACCGGCACAGACTGCTACTCCTGCTCCTTCGCCAACTCCACGCCCATCCATGAGACGTATCAGCCGCGCTGGGATTACTGGGGAAGGTACATGGAGCCAGTGACGTCGAGGATTCCGATGATGGTGGTGGAAGGGAACCATGAGATTGAGGAGCAGATCGATAACAAGACGTTCGCTTCTTACAGCTCCAGATTCTCGTTCCCATCGACGGAGAGTGGATCATTCTCTCCATTCTACTACTCTTTCGATGCTGGAGGCATCCATTTCATCATGCTCGCGGCTTATGCTGAT ]
[-] EMBL CB660170 [ ATCATGCTCGCGGCTTATGCTGATTACAGTAAATCAGGGAAGCAGTACAAATGGCTGGAGAAAGACTTGGCAAAGGTGGACAGGTCGGTGACCCCCTGGGTGATAGCCGGCTGGCATGCGCCATGGTACAGCACCTTCAAAGCTCACTACAGGGAAGCAGAGTGCATGCGAGTGGCCATGGAGGAGCTCCTCTACTCCTACGCCGTCGACGTCGTCTTCACCGGCCATGTGCATGCTTACGAGCGTTCGAACCGGGTGTTCAACTACACGCTGGACCCGTGCGGCCCCGTGCACATCTCCGTCGGCGACGGCGGCAACCGCGAGAAGATGGCCACCAGCTACGCCGACGAGCCGGGGCGCTGCCCTGACCCGCTGTCCACGCCGGACCCCTTCATGGGCGGCGGCTTCTGCGGCTTC AACTTCACCTCCGGCCCCGCCGCCGGCAGCTTTTGCTGGGACCGGCAGCCCGACTACAGCGCCTACCGGGAGAGCAGCTTCGGCCATGGCATTCTTGAGGTGAAGAACGAGACGCATGCGTTGTGGAGATGGCACAGGAACCAGGATCTGTACGGTAGTGTCGGGGATGAGATTTACATTGTTCGGGAGCCTGACAAGTGCCTGATCAAATCCAGTAGAAATAGAATAGCTTACTATTGATTAATTTCTATCAGAAGAAGAGCCAAATTACGCGGGCACATTTTATAGTGCTTTGCTAGCTAGTTGTACTCAGATTTGTCAGGTAAATTCCATGCAGGGACCTTCAGGTCTGCTGTTGTATAC ]
[-] EMBL CB660520 [ TCATGCTCGCGGCTTATGCTGATTACAGTAAATCAGGGAAGCAGTACAAATGGCTGGAGAAAGACTTGGCAAAGGTGGACAGGTCGGTGACCCCCTGGGTGATAGCCGGCTGGCATGCGCCATGGTACAGCACCTTCAAAGCTCACTACAGGGAAGCAGAGTGCATGCGAGTGGCCATGGAGGAGCTCCTCTACTCCTACGCCGTCGACGTCGTCTTCACCGGCCATGTGCATGCTTACGAGCGTTCGAACCGGGTGTTCAACTACACGCTGGACCCGTGCGGCCCCGTGCACATCTCCGTCGGCGACGGCGGCAACCGCGAGAAGATGGCCACCAGCTACGCCGACGAGCCGGGGCGCTGCCCTGACCCGCTGTCCACGCCGGACCCCTTCATGGGCGGCGGCTTCTGCGGCTTC AACTTCACCTCCGGCCCCGCCGCCGGCAGCTTTTGCTGGGACCGGCAGCCCGACTACAGCGCCTACCGGGAGAGCAGCTTCGGCCATGGCATTCTTGAGGTGAAGAACGAGACGCATGCGTTGTGGAGATGGCACAGGAACCAGGATCTGTACGGTAGTGTCGGGGATGAGATTTACATTGTTCGGGAGCCTGACAAGTGCCTGATCAAATCCAGTAGAAATAGAATAGCTTACTATTGATTAATTTCTATCAGAAGAAGAGCCAAATTACGCGGGCACATTTTATAGTGCTTTGCTAGCTAGTTGTACTCAGATTTGTCAGGTAAATTCCATGCAGCGACCGGCATCTCTGCTGTTGTATACGTGTTCTTGTAAGACATCTGAAGAATGAATGAAGCTGGAATTGTACTTTGTAATT ]
[-] EMBL CB655102 [ TCGCGGCTTATGCTGATTACAGTAAATCAGGGAAGCAGTACAAATGGCTGGAGAAAGACTTGGCAAAGGTGGACAGGTCGGTGACCCCCTGGGTGATAGCCGGCTGGCATGCGCCATGGTACAGCACCTTCAAAGCTCACTACAGGGAAGCAGAGTGCATGCGAGTGGCCATGGAGGAGCTCCTCTACTCCTACGCCGTCGACGTCGTCTTCACCGGCCATGTGCATGCTTACGAGCGTTCGAACCGGGTGTTCAACTACACGCTGGACCCGTGCGGCCCCGTGCACATCTCCGTCGGCGACGGCGGCAACCGCGAGAAGATGGCCACCAGCTACGCCGACGAGCCGGGGCGCTGCCCTGACCCGCTGTCCACGCCGGACCCCTTCATGGGCGGCGGCTTCTGCGGCTTC AACTTCACCTCCGGCCCCGCCGCCGGCAGCTTCTGCTGGGACCGGCAGCCCGACTACAGCGCCTACCGGGAGAGCAGCTTCGGCCATGGCATTCTTGAGGTGAAGAACGAGACGCATGCGTTGTGGAGATGGCACAGGAACCAGGATCTGTACGGTAGTGTCGGGGATGAGATTTACATTGTTCGGGAGCCTGACAAGTGCCTGATCAAATCCAGTAGAAATAGAATAGCTTACTATTGATTAATTTCTATCAGAAGAAGAGCCAAATTACGCGGGCACATTTTATAGTGCTTTGCTAGCTAGTTGTACTCAGATTTGTCAGGTAAATTCCATGCAGCGACCGGCATCTCTGCTGTTGTATACGTGTTCTTGTAAGACATCTGAAGAATGAATGAAGC ]
[-] EMBL CB660169 [ GCATGCGCCATGGTACAGCACCTTCAAAGCTCACTACAGGGAAGCAGAGTGCATGCGAGTGGCCATGGAGGAGCTCCTCTACTCCTACGCCGTTGACGTTGTCTTCACCGGCCATGTGCATGTTTACGAGCGTTCGAACCGGGTGTTCAACTACACGCTGGACCCGTGCGGCCCCGTGCACATCTCCGTCGGCGACGGCGGCAACCGCGAGAAGATGGCCACCAGCTACGCCGACGAGCCGGGGCGCTGCCCTGACCCGCTGTCCACGCCGGACCCCTTCATGGGCGGCGGCTTTTGCGGGTTC AACTTCACCTCCGGCCCCGCCGCCGGCAGCTTTTGCTGGGACCGGCAGCCCGACTACAGCGCCTACCGGGAGAGCAGCTTCGGCCATGGCATTCTTGAGGTGAAGAACGAGACGCATGCGTTGTGGAGATGGCACAGGAACCAGGATCTGTACGGTAGTGTCGGGGATGAGATTTACATTGTTTGGGAGCTTGACAAGTGCCTGATCAAATCCAGTAGAAATAGAATAGCTTATTATTGATTAATTTCTATCAGAAGAAGAGTCAAATTGCGGGGGCACATTTTATAGTGTTTTGCTAGCTAGTTGTAATCAGATTTGTCAGTTAAA ]
[-] EMBL CB660519 [ TACAGCACCTTCAAAGGTCACTACAGGGAAGCAGAGTGCATGCGAGTGGCCATGGAGGAGCTCCTTTATTCCTACGCCGTTGACGTTGTCTTCACCGGCCATGTGCATGCTTACGAGCGTTTGAACCGGGTGTTCAACTACACGCTGGACCCGTGCGGCCCCGTGCACATCTCCGTCGGCGACGGCGGCAACCGCGAGAAGATGGCCACCAGTTACGCCGACGAGCCGGGGCGCTGCCCTGACCCGCTGTTCACGCCGGACCCCTTCATGGGCGGCGGGTTTTGCGGGTTC AACTTCACCTCCGGCCCCGCCGCCGGCAGCTTTTGCTGGGACCGGCAGCCCGATTACAGCGCCTACCGGGAGAGCAGATTCGGCCATGGCATTTTTGAGGTGAAGAACGAGACGCATGCGTTGTGGAGATGGCACAGGAACCAGGATTTGTACGGTAGTGTCGGGGATGAGATTTACATTGTTTGGGAGCCTGACAAGTGCCTGATCAAATCCAGTAGAAATAGAATAGGTTACTATTGATTAATTTTTATCAGAAGAAGAGCCAAATTACGGGGGCACATTTTATAGTGGTTTGGTAGCTAGTTGTATTCAGATTTGTCAAGTAAATT ]
[-] EMBL CB637964 [ GCCACCAGNTACGCCGACGAGCCGGGGATCTGCCCTGACCCGCTGTCCACGCCGGACCCCTTCATGGGCGGTGGCTTTTGCGGCTTC AACTTCACCTCCGGCCCCGCCGCCGGCAGCTTTTGCTGGGACCGGCAGCCCGACTACAGCGCCTACCGGGAGAGCAGCTTCGGCCATGGCATTCTTGAGGTGAAGAACGAGACGCATGCGTTGTGGAGATGGCACAGGAACCAGGATCTGTACGGTAGTGTCGGGGATGAGATTTACATTGTTCGGGAGCCTGACAAGTGCCTGATCAAATCCAGTAGAAATAGAATAGCTTACTATTGATTAATTTCTATCAGAAGAAGAGCCAAATTACGCGGGCACATTTTATAGTGCTTTGCTAGCTAGTTGTACTCAGATTTGTCAGGTAAATTCCATGCAGCGACCGGCATCTCTGCTGTTGTATACGTGTTTTTGTAAGACATCTGAAGAATGAATGAAGCTTAAATTGTACT ]
[+] EMBL BI803705 [ GCGGCTTCAAACTTCACCTCCGGCCCC CCGCC GCAGCTTCTGCTGGGACC GCAGCCCGACTACAGCGCCTACCGGGAGAGCAGCTTCGGCCATGGCATTCTTGAGGTGAAGAACGAGACGCATGCGTTGTGGAGATGGCACAGGAACCAGGATCTGTACGGTAGTGTCGGGGATGAGATTTACATTGTTCGGGAGCCTGACAAGTGCCTGATCAAATCCAGTAGAAATAGAATAGCTTACTATTGATTAATTTCTATCAGAAGAAGAGCC AATTACGCGGGCACATTTTATAGTGCTTTGCTAGCTAGTTGTACTCAGATTTGTCAGGTAAATTCCATGCAGCGACCGGCATCTCTGCTGTTGTATACGTGTTCTTGTAAGACATCTGAAGAATGAATGAAGCTTAAATTGTACTTTGTAATTTAGTTGTAGAAATTTTGGAATTATTACAAGATGGAAGCCACCTTGCAAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||