These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11527#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1975 fasta sequence [TCCCTTTACATATCTGCATCAACTTTCTCGTTCCAAACAGGCGATGGTGAGCAGAGCGGACACGCCGGCCGCCGCCCATCTTGTCCCAATTCGGCTCCTATAAATTTCCCTCCAAATTCGCACTGATTCCTCACGCTACCCGCCCATCGATCTCGCGCCATCTCACAATGCGGATGAGGGTCTCACTGCGCCGTCGACGTTGGCCGGGCCGACGCGGCCGGTGACGGTGCCGCCGCGGGACAGGGGCCACGCGGTGGACCTGCCGGACACGGACCCGCGGGTGCAGCGGCGGGTCAAGGGGTGGGCGCCGGAGCAGATCGCCGTCGCGCTCTCCGCCGCGCCCTCCTCCGCCTGGGTCTCCTGGGTCACGGGGGACTTCCAGATGGGCGCCGCCGTCGAGCCGCTCGACCCCACGGCGGTCGCCAGCGTCGTCCGCTACGGCCTCGCCGCCGACTCGCTCGTCCGCCGCGCCACCGGCGACGCCCTCGTGTACAGCCAGCTCTACCCCTTCGACGGCCTCCTCAACTACACCTCCGCCATCATCCACCATGTCCGCCTCCAAGGGCTTGAGCCAGGGACAGAGTACTTCTACCAGTGCGGCGACCCGGCGATCCCGGCGGCGATGAGCGACATCCACGCGTTCCGCACGATGCCGGCCGTCGGGCCGAGGAGCTACCCGGGGAAGATCGCCATCGTCGGGGACCTTGGACTGACGTACAACACCACCTCCACCGTCGAGCACATGGTGAGCAACCAGCCCGACCTGGTCCTCCTCCTCGGCGACGTCAGCTACGCCAACCTGTACCTCACCAATGGCACCGGCACAGACTGCTACTCCTGCTCCTTCGCCAACTCCACGCCCATCCATGAGACGTATCAGCCGCGCTGGGATTACTGGGGAAGGTACATGGAGCCAGTGACGTCGAGGATTCCGATGATGGTGGTGGAAGGGAACCATGAGATTGAGGAGCAGATCGATAACAAGACGTTCGCTTCTTACAGCTCCAGATTCTCGTTCCCATCGACGGAGAGTGGATCATTCTCTCCATTCTACTACTCTTTCGATGCTGGAGGCATCCATTTCATCATGCTCGCGGCTTATGCTGATTACAGTAAATCAGGGAAGCAGTACAAATGGCTGGAGAAAGACTTGGCAAAGGTGGACAGGTCGGTGACCCCCTGGGTGATAGCCGGCTGGCATGCGCCATGGTACAGCACCTTCAAAGCTCACTACAGGGAAGCAGAGTGCATGCGAGTGGCCATGGAGGAGCTCCTCTACTCCTACGCCGTCGACGTCGTCTTCACCGGCCATGTGCATGCTTACGAGCGTTCGAACCGGGTGTTCAACTACACGCTGGACCCGTGCGGCCCCGTGCACATCTCCGTCGGCGACGGCGGCAACCGCGAGAAGATGGCCACCAGCTACGCCGACGAGCCGGGGCGCTGCCCTGACCCGCTGTCCACGCCGGACCCCTTCATGGGCGGCGGCTTCTGCGGCTTC-AACTTCACCTCCGGCCCCGCCGCCGGCAGCTTTTGCTGGGACCGGCAGCCCGACTACAGCGCCTACCGGGAGAGCAGCTTCGGCCATGGCATTCTTGAGGTGAAGAACGAGACGCATGCGTTGTGGAGATGGCACAGGAACCAGGATCTGTACGGTAGTGTCGGGGATGAGATTTACATTGTTCGGGAGCCTGACAAGTGCCTGATCAAATCCAGTAGAAATAGAATAGCTTACTATTGATTAATTTCTATCAGAAGAAGAGCCAAATTACGCGGGCACATTTTATAGTGCTTTGCTAGCTAGTTGTACTCAGATTTGTCAGGTAAATTCCATGCAGCGACCGGCATCTCTGCTGTTGTATACGTGTTCTTGTAAGACATCTGAAGAATGAATGAAGCTTAAATTGTACTTTGTAATTTAGTTGTAGAAATTTTGGAATTATTACAAGATGGAAGCCACCTTGCAAAAAAAAAA] [+] EMBL AK072278 [TCCCTTTACATATCTGCATCAACTTTCTCGTTCCAAACAGGCGATGGTGAGCAGAGCGGACACGCCGGCCGCCGCCCATCTTGTCCCAATTCGGCTCCTATAAATTTCCCTCCAAATTCGCACTGATTCCTCACGCTACCCGCCCATCGATCTCGCGCCATCTCACAATGCGGATGAGGGTCTCACTGCGCCGTCGACGTTGGCCGGGCCGACGCGGCCGGTGACGGTGCCGCCGCGGGACAGGGGCCACGCGGTGGACCTGCCGGACACGGACCCGCGGGTGCAGCGGCGGGTCAAGGGGTGGGCGCCGGAGCAGATCGCCGTCGCGCTCTCCGCCGCGCCCTCCTCCGCCTGGGTCTCCTGGGTCACGGGGGACTTCCAGATGGGCGCCGCCGTCGAGCCGCTCGACCCCACGGCGGTCGCCAGCGTCGTCCGCTACGGCCTCGCCGCCGACTCGCTCGTCCGCCGCGCCACCGGCGACGCCCTCGTGTACAGCCAGCTCTACCCCTTCGACGGCCTCCTCAACTACACCTCCGCCATCATCCACCATGTCCGCCTCCAAGGGCTTGAGCCAGGGACAGAGTACTTCTACCAGTGCGGCGACCCGGCGATCCCGGCGGCGATGAGCGACATCCACGCGTTCCGCACGATGCCGGCCGTCGGGCCGAGGAGCTACCCGGGGAAGATCGCCATCGTCGGGGACCTTGGACTGACGTACAACACCACCTCCACCGTCGAGCACATGGTGAGCAACCAGCCCGACCTGGTCCTCCTCCTCGGCGACGTCAGCTACGCCAACCTGTACCTCACCAATGGCACCGGCACAGACTGCTACTCCTGCTCCTTCGCCAACTCCACGCCCATCCATGAGACGTATCAGCCGCGCTGGGATTACTGGGGAAGGTACATGGAGCCAGTGACGTCGAGGATTCCGATGATGGTGGTGGAAGGGAACCATGAGATTGAGGAGCAGATCGATAACAAGACGTTCGCTTCTTACAGCTCCAGATTCTCGTTCCCATCGACGGAGAGTGGATCATTCTCTCCATTCTACTACTCTTTCGATGCTGGAGGCATCCATTTCATCATGCTCGCGGCTTATGCTGATTACAGTAAATCAGGGAAGCAGTACAAATGGCTGGAGAAAGACTTGGCAAAGGTGGACAGGTCGGTGACCCCCTGGGTGATAGCCGGCTGGCATGCGCCATGGTACAGCACCTTCAAAGCTCACTACAGGGAAGCAGAGTGCATGCGAGTGGCCATGGAGGAGCTCCTCTACTCCTACGCCGTCGACGTCGTCTTCACCGGCCATGTGCATGCTTACGAGCGTTCGAACCGGGTGTTCAACTACACGCTGGACCCGTGCGGCCCCGTGCACATCTCCGTCGGCGACGGCGGCAACCGCGAGAAGATGGCCACCAGCTACGCCGACGAGCCGGGGCGCTGCCCTGACCCGCTGTCCACGCCGGACCCCTTCATGGGCGGCGGCTTCTGCGGCTTC AACTTCACCTCCGGCCCCGCCGCCGGCAGCTTCTGCTGGGACCGGCAGCCCGACTACAGCGCCTACCGGGAGAGCAGCTTCGGCCATGGCATTCTTGAGGTGAAGAACGAGACGCATGCGTTGTGGAGATGGCACAGGAACCAGGATCTGTACGGTAGTGTCGGGGATGAGATTTACATTGTTCGGGAGCCTGACAAGTGCCTGATCAAATCCAGTAGAAATAGAATAGCTTACTATTGATTAATTTCTATCAGAAGAAGAGCCAAATTACGCGGGCACATTTTATAGTGCTTTGCTAGCTAGTTGTACTCAGATTTGTCAGGTAAATTCCATGCAGCGACCGGCATCTCTGCTGTTGTATACGTGTTCTTGTAAGACATCTGAAGAATGAATGAAGCTTAAAT ] [+] EMBL CB655101 [ AGATGCGTGCCGCCGTCGAGCCGCTCGACCCCACGGCGGTCGCCAGCGTCGTCCGCTACGGCCTCGCCGCCGACTCGCTCGTCCGCCGCGCCACCGGCGACGCCCTCGTGTACAGCCAGCTCTACCCCTTCGACGGCCTCCTCAACTACACCTCCGCCATCATCCACCATGTCCGCCTCCAAGGGCTTGAGCCAGGGACAGAGTACTTCTACCAGTGCGGCGACCCGGCGATCCCGGCGGCGATGAGCGACATCCACGCGTTCCGCACGATGCCGGCCGTCGGGCCGAGGAGCTACCCGGGGAAGATCGCCATCGTCGGGGACCTTGGACTGACGTACAACACCACCTCCACCGTCGAGCACATGGTGAGCAACCAGCCCGACCTGGTCCTCCTCCTCGGCGACGTCAGCTACGCCAACCTGTACCTCACCAATGGCACCGGCACAGACTGCTACTCCTGCTCCTTCGCCAACTCCACGCCCATCCATGAGACGTATCAGCCGCGCTGGGATTACTGGGGAAGGTACATGGAGCCAGTGACGTCGAGGATTCCGATGATGGTGGTGGAAGGGAACCATGAGATTGAGGAGCAGATCGATAACAAGACGTTCGCTTCTTACAGCTCCAGATTCTCGTTCCCATCGACGGAGAGTGGATCATTCTCTCCATTCTACTACTCTTTCGATGCTGGAGGCATCCATTTCATCATGCTCGCGGCTTATGCTGAT ] [-] EMBL CB660170 [ ATCATGCTCGCGGCTTATGCTGATTACAGTAAATCAGGGAAGCAGTACAAATGGCTGGAGAAAGACTTGGCAAAGGTGGACAGGTCGGTGACCCCCTGGGTGATAGCCGGCTGGCATGCGCCATGGTACAGCACCTTCAAAGCTCACTACAGGGAAGCAGAGTGCATGCGAGTGGCCATGGAGGAGCTCCTCTACTCCTACGCCGTCGACGTCGTCTTCACCGGCCATGTGCATGCTTACGAGCGTTCGAACCGGGTGTTCAACTACACGCTGGACCCGTGCGGCCCCGTGCACATCTCCGTCGGCGACGGCGGCAACCGCGAGAAGATGGCCACCAGCTACGCCGACGAGCCGGGGCGCTGCCCTGACCCGCTGTCCACGCCGGACCCCTTCATGGGCGGCGGCTTCTGCGGCTTC AACTTCACCTCCGGCCCCGCCGCCGGCAGCTTTTGCTGGGACCGGCAGCCCGACTACAGCGCCTACCGGGAGAGCAGCTTCGGCCATGGCATTCTTGAGGTGAAGAACGAGACGCATGCGTTGTGGAGATGGCACAGGAACCAGGATCTGTACGGTAGTGTCGGGGATGAGATTTACATTGTTCGGGAGCCTGACAAGTGCCTGATCAAATCCAGTAGAAATAGAATAGCTTACTATTGATTAATTTCTATCAGAAGAAGAGCCAAATTACGCGGGCACATTTTATAGTGCTTTGCTAGCTAGTTGTACTCAGATTTGTCAGGTAAATTCCATGCAGGGACCTTCAGGTCTGCTGTTGTATAC ] [-] EMBL CB660520 [ TCATGCTCGCGGCTTATGCTGATTACAGTAAATCAGGGAAGCAGTACAAATGGCTGGAGAAAGACTTGGCAAAGGTGGACAGGTCGGTGACCCCCTGGGTGATAGCCGGCTGGCATGCGCCATGGTACAGCACCTTCAAAGCTCACTACAGGGAAGCAGAGTGCATGCGAGTGGCCATGGAGGAGCTCCTCTACTCCTACGCCGTCGACGTCGTCTTCACCGGCCATGTGCATGCTTACGAGCGTTCGAACCGGGTGTTCAACTACACGCTGGACCCGTGCGGCCCCGTGCACATCTCCGTCGGCGACGGCGGCAACCGCGAGAAGATGGCCACCAGCTACGCCGACGAGCCGGGGCGCTGCCCTGACCCGCTGTCCACGCCGGACCCCTTCATGGGCGGCGGCTTCTGCGGCTTC AACTTCACCTCCGGCCCCGCCGCCGGCAGCTTTTGCTGGGACCGGCAGCCCGACTACAGCGCCTACCGGGAGAGCAGCTTCGGCCATGGCATTCTTGAGGTGAAGAACGAGACGCATGCGTTGTGGAGATGGCACAGGAACCAGGATCTGTACGGTAGTGTCGGGGATGAGATTTACATTGTTCGGGAGCCTGACAAGTGCCTGATCAAATCCAGTAGAAATAGAATAGCTTACTATTGATTAATTTCTATCAGAAGAAGAGCCAAATTACGCGGGCACATTTTATAGTGCTTTGCTAGCTAGTTGTACTCAGATTTGTCAGGTAAATTCCATGCAGCGACCGGCATCTCTGCTGTTGTATACGTGTTCTTGTAAGACATCTGAAGAATGAATGAAGCTGGAATTGTACTTTGTAATT ] [-] EMBL CB655102 [ TCGCGGCTTATGCTGATTACAGTAAATCAGGGAAGCAGTACAAATGGCTGGAGAAAGACTTGGCAAAGGTGGACAGGTCGGTGACCCCCTGGGTGATAGCCGGCTGGCATGCGCCATGGTACAGCACCTTCAAAGCTCACTACAGGGAAGCAGAGTGCATGCGAGTGGCCATGGAGGAGCTCCTCTACTCCTACGCCGTCGACGTCGTCTTCACCGGCCATGTGCATGCTTACGAGCGTTCGAACCGGGTGTTCAACTACACGCTGGACCCGTGCGGCCCCGTGCACATCTCCGTCGGCGACGGCGGCAACCGCGAGAAGATGGCCACCAGCTACGCCGACGAGCCGGGGCGCTGCCCTGACCCGCTGTCCACGCCGGACCCCTTCATGGGCGGCGGCTTCTGCGGCTTC AACTTCACCTCCGGCCCCGCCGCCGGCAGCTTCTGCTGGGACCGGCAGCCCGACTACAGCGCCTACCGGGAGAGCAGCTTCGGCCATGGCATTCTTGAGGTGAAGAACGAGACGCATGCGTTGTGGAGATGGCACAGGAACCAGGATCTGTACGGTAGTGTCGGGGATGAGATTTACATTGTTCGGGAGCCTGACAAGTGCCTGATCAAATCCAGTAGAAATAGAATAGCTTACTATTGATTAATTTCTATCAGAAGAAGAGCCAAATTACGCGGGCACATTTTATAGTGCTTTGCTAGCTAGTTGTACTCAGATTTGTCAGGTAAATTCCATGCAGCGACCGGCATCTCTGCTGTTGTATACGTGTTCTTGTAAGACATCTGAAGAATGAATGAAGC ] [-] EMBL CB660169 [ GCATGCGCCATGGTACAGCACCTTCAAAGCTCACTACAGGGAAGCAGAGTGCATGCGAGTGGCCATGGAGGAGCTCCTCTACTCCTACGCCGTTGACGTTGTCTTCACCGGCCATGTGCATGTTTACGAGCGTTCGAACCGGGTGTTCAACTACACGCTGGACCCGTGCGGCCCCGTGCACATCTCCGTCGGCGACGGCGGCAACCGCGAGAAGATGGCCACCAGCTACGCCGACGAGCCGGGGCGCTGCCCTGACCCGCTGTCCACGCCGGACCCCTTCATGGGCGGCGGCTTTTGCGGGTTC AACTTCACCTCCGGCCCCGCCGCCGGCAGCTTTTGCTGGGACCGGCAGCCCGACTACAGCGCCTACCGGGAGAGCAGCTTCGGCCATGGCATTCTTGAGGTGAAGAACGAGACGCATGCGTTGTGGAGATGGCACAGGAACCAGGATCTGTACGGTAGTGTCGGGGATGAGATTTACATTGTTTGGGAGCTTGACAAGTGCCTGATCAAATCCAGTAGAAATAGAATAGCTTATTATTGATTAATTTCTATCAGAAGAAGAGTCAAATTGCGGGGGCACATTTTATAGTGTTTTGCTAGCTAGTTGTAATCAGATTTGTCAGTTAAA ] [-] EMBL CB660519 [ TACAGCACCTTCAAAGGTCACTACAGGGAAGCAGAGTGCATGCGAGTGGCCATGGAGGAGCTCCTTTATTCCTACGCCGTTGACGTTGTCTTCACCGGCCATGTGCATGCTTACGAGCGTTTGAACCGGGTGTTCAACTACACGCTGGACCCGTGCGGCCCCGTGCACATCTCCGTCGGCGACGGCGGCAACCGCGAGAAGATGGCCACCAGTTACGCCGACGAGCCGGGGCGCTGCCCTGACCCGCTGTTCACGCCGGACCCCTTCATGGGCGGCGGGTTTTGCGGGTTC AACTTCACCTCCGGCCCCGCCGCCGGCAGCTTTTGCTGGGACCGGCAGCCCGATTACAGCGCCTACCGGGAGAGCAGATTCGGCCATGGCATTTTTGAGGTGAAGAACGAGACGCATGCGTTGTGGAGATGGCACAGGAACCAGGATTTGTACGGTAGTGTCGGGGATGAGATTTACATTGTTTGGGAGCCTGACAAGTGCCTGATCAAATCCAGTAGAAATAGAATAGGTTACTATTGATTAATTTTTATCAGAAGAAGAGCCAAATTACGGGGGCACATTTTATAGTGGTTTGGTAGCTAGTTGTATTCAGATTTGTCAAGTAAATT ] [-] EMBL CB637964 [ GCCACCAGNTACGCCGACGAGCCGGGGATCTGCCCTGACCCGCTGTCCACGCCGGACCCCTTCATGGGCGGTGGCTTTTGCGGCTTC AACTTCACCTCCGGCCCCGCCGCCGGCAGCTTTTGCTGGGACCGGCAGCCCGACTACAGCGCCTACCGGGAGAGCAGCTTCGGCCATGGCATTCTTGAGGTGAAGAACGAGACGCATGCGTTGTGGAGATGGCACAGGAACCAGGATCTGTACGGTAGTGTCGGGGATGAGATTTACATTGTTCGGGAGCCTGACAAGTGCCTGATCAAATCCAGTAGAAATAGAATAGCTTACTATTGATTAATTTCTATCAGAAGAAGAGCCAAATTACGCGGGCACATTTTATAGTGCTTTGCTAGCTAGTTGTACTCAGATTTGTCAGGTAAATTCCATGCAGCGACCGGCATCTCTGCTGTTGTATACGTGTTTTTGTAAGACATCTGAAGAATGAATGAAGCTTAAATTGTACT ] [+] EMBL BI803705 [ GCGGCTTCAAACTTCACCTCCGGCCCC CCGCC GCAGCTTCTGCTGGGACC GCAGCCCGACTACAGCGCCTACCGGGAGAGCAGCTTCGGCCATGGCATTCTTGAGGTGAAGAACGAGACGCATGCGTTGTGGAGATGGCACAGGAACCAGGATCTGTACGGTAGTGTCGGGGATGAGATTTACATTGTTCGGGAGCCTGACAAGTGCCTGATCAAATCCAGTAGAAATAGAATAGCTTACTATTGATTAATTTCTATCAGAAGAAGAGCC AATTACGCGGGCACATTTTATAGTGCTTTGCTAGCTAGTTGTACTCAGATTTGTCAGGTAAATTCCATGCAGCGACCGGCATCTCTGCTGTTGTATACGTGTTCTTGTAAGACATCTGAAGAATGAATGAAGCTTAAATTGTACTTTGTAATTTAGTTGTAGAAATTTTGGAATTATTACAAGATGGAAGCCACCTTGCAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||